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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11f03
         (665 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_05_0127 - 18401461-18401464,18401868-18403876,18404060-184042...    32   0.47 
09_06_0303 - 22149214-22149474,22150099-22150236,22150856-221511...    31   0.82 
09_06_0142 - 21107878-21109104                                         29   4.4  
08_02_1258 - 25670092-25670152,25671124-25671327,25671400-256716...    29   4.4  
08_02_0821 + 21545013-21545082,21545660-21545769,21546302-215463...    28   5.8  
06_03_1457 - 30287185-30287287,30287691-30287759,30288212-302883...    28   5.8  
06_01_0255 - 1900508-1900549,1900728-1900817,1900902-1900995,190...    28   5.8  
01_06_0795 - 32051794-32053362,32053452-32053595,32054102-320549...    28   5.8  
07_01_0072 - 525351-525494,526029-526256,526345-526458,527616-52...    28   7.7  
03_06_0071 + 31465707-31466237,31467455-31468075,31468438-314685...    28   7.7  

>01_05_0127 -
           18401461-18401464,18401868-18403876,18404060-18404237,
           18404381-18404958,18405609-18405611
          Length = 923

 Score = 31.9 bits (69), Expect = 0.47
 Identities = 10/15 (66%), Positives = 13/15 (86%)
 Frame = -3

Query: 360 HITYCLGIHTIFFCD 316
           H+T CL +HT+FFCD
Sbjct: 708 HVTRCLKMHTVFFCD 722


>09_06_0303 -
           22149214-22149474,22150099-22150236,22150856-22151100,
           22151344-22151809
          Length = 369

 Score = 31.1 bits (67), Expect = 0.82
 Identities = 15/53 (28%), Positives = 28/53 (52%)
 Frame = +1

Query: 379 ILHKYTQTYSTLVQDVRSVDLDKVLFEWFKSETQNGNTINEEQLQSKATNLEK 537
           +  ++ + Y++  QD+ S D+ K  FE FK+  +  N  N+++  S    L K
Sbjct: 42  LYERWRRVYASSSQDLPSSDMMKSRFEAFKANARQVNEFNKKEGMSYTLGLNK 94


>09_06_0142 - 21107878-21109104
          Length = 408

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = +1

Query: 280 INALDNGQCKMEIAKKYGVNPQTISNMYR 366
           I A D+G  K+++  KYG NP  +  + R
Sbjct: 161 IKAPDSGDAKVDLGLKYGANPDEVLPLLR 189


>08_02_1258 -
           25670092-25670152,25671124-25671327,25671400-25671611,
           25671701-25671749,25671833-25672612,25672696-25672767,
           25672907-25672954,25673053-25673127,25673238-25673312,
           25673614-25673668,25673931-25674016,25674759-25674988
          Length = 648

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 15/58 (25%), Positives = 29/58 (50%)
 Frame = +1

Query: 355 NMYRKKEYILHKYTQTYSTLVQDVRSVDLDKVLFEWFKSETQNGNTINEEQLQSKATN 528
           ++++  +++ +KY  T   +V + R  +L +     F  + QNG+      L S ATN
Sbjct: 167 DLHKNDDWLKNKYHPTNLEIVMESRRNELARTAANQFLQDLQNGSLDIGPGLTSSATN 224


>08_02_0821 +
           21545013-21545082,21545660-21545769,21546302-21546376,
           21546825-21546875
          Length = 101

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = +1

Query: 217 LMHIFPKKGYKKIGPLTKLQIINALDNGQCKMEI 318
           L+H+  + GY K    T    +  LDN   KME+
Sbjct: 63  LIHVLEEAGYTKDSNFTLPDFMKILDNSDVKMEV 96


>06_03_1457 - 30287185-30287287,30287691-30287759,30288212-30288351,
            30288447-30288641,30288743-30289363,30289688-30290257,
            30290332-30293638,30293764-30293863,30293978-30295014,
            30295256-30295604,30296299-30296374,30296456-30297022,
            30297094-30297238,30298281-30298405,30298491-30298582,
            30298646-30298828,30298946-30299058,30299499-30299649,
            30299720-30299882
          Length = 2701

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 10/18 (55%), Positives = 15/18 (83%)
 Frame = -2

Query: 340  DSHHIFLRFPSCIDHYLK 287
            DS+ +F++FPS IDH +K
Sbjct: 2225 DSNALFMQFPSLIDHLIK 2242


>06_01_0255 -
           1900508-1900549,1900728-1900817,1900902-1900995,
           1901119-1901315,1901838-1901957,1902559-1902654,
           1902744-1902869,1903125-1903221,1904476-1904546,
           1904629-1904724,1904803-1904955,1904993-1905136
          Length = 441

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 17/62 (27%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
 Frame = +1

Query: 301 QCKMEIAKKYGVNPQTISN--MYRKKEYILHKYTQTYSTLVQDVRSVDLDKVLFEWFKSE 474
           QC+  I KK+ + P   +N  M  K   ++H++  TY  +  D+  +D  K ++E  K+ 
Sbjct: 48  QCR-SILKKFSIFPTAYNNFRMSAKIAPVIHEW--TYDAMCHDLLEMDGQKYIYEVSKAG 104

Query: 475 TQ 480
           ++
Sbjct: 105 SE 106


>01_06_0795 -
           32051794-32053362,32053452-32053595,32054102-32054965,
           32055335-32055892
          Length = 1044

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 17/52 (32%), Positives = 27/52 (51%)
 Frame = -1

Query: 539 TFSRFVALLCNCSSFIVFPF*VSDLNHSKRTLSRSTERTSCTSVLYVCVYLC 384
           T+ +  A+  NC+  +V    V+ LNH +R L RS ER + +      + LC
Sbjct: 546 TWEKLSAIRANCAIELVLDECVALLNHMRR-LKRSAERAAASQGHGPTIRLC 596


>07_01_0072 -
           525351-525494,526029-526256,526345-526458,527616-527747,
           529086-529265,529376-529507,529879-530055,530536-530718,
           530894-530938,531192-531306,531770-532128,532700-532939
          Length = 682

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 15/40 (37%), Positives = 21/40 (52%)
 Frame = +1

Query: 280 INALDNGQCKMEIAKKYGVNPQTISNMYRKKEYILHKYTQ 399
           I + D  + K E  +  G N +  S + RKKE +  KYTQ
Sbjct: 463 IESKDPEKVKQEKERALGQNIRAHSILQRKKEKVSRKYTQ 502


>03_06_0071 +
           31465707-31466237,31467455-31468075,31468438-31468520,
           31468895-31468979
          Length = 439

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 11/35 (31%), Positives = 24/35 (68%)
 Frame = +1

Query: 439 LDKVLFEWFKSETQNGNTINEEQLQSKATNLEKVR 543
           LDK+L  WF ++TQ+  ++  + +Q+K T++  ++
Sbjct: 300 LDKILKTWFSNKTQDSKSM--QFIQAKVTSIPLIK 332


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,824,124
Number of Sequences: 37544
Number of extensions: 273992
Number of successful extensions: 560
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 546
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 560
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1679486824
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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