BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bmov11f03 (665 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AC006651-7|AAX22287.1| 786|Caenorhabditis elegans Hypothetical ... 32 0.32 AC006651-6|AAF39868.1| 833|Caenorhabditis elegans Hypothetical ... 32 0.32 AC006651-8|AAX22286.1| 716|Caenorhabditis elegans Hypothetical ... 31 0.73 AF098996-3|AAC68707.2| 349|Caenorhabditis elegans Serpentine re... 29 3.9 AF047661-4|AAC04435.2| 931|Caenorhabditis elegans Hypothetical ... 27 9.1 AF003146-2|AAB54201.1| 228|Caenorhabditis elegans Hypothetical ... 27 9.1 >AC006651-7|AAX22287.1| 786|Caenorhabditis elegans Hypothetical protein H06I04.3c protein. Length = 786 Score = 32.3 bits (70), Expect = 0.32 Identities = 28/114 (24%), Positives = 48/114 (42%), Gaps = 9/114 (7%) Frame = +1 Query: 121 VGIQLKFSFSNKNSVRMSFWNPGTKNEEDLSQLMHIFPKKGYKKIGPLTKLQI------- 279 +G Q+ +S ++ WN N+EDL KK Y K P+TK Q+ Sbjct: 636 IGEQMIYSAKAARNLEDEAWNRYANNDEDLPDWFADDEKKHYFKQTPVTKEQVALYRERM 695 Query: 280 --INALDNGQCKMEIAKKYGVNPQTISNMYRKKEYILHKYTQTYSTLVQDVRSV 435 NA + + A+K + + + +K E IL +S V++++ V Sbjct: 696 REFNARPSKKVAEAKARKQKKMQRKLESAKKKAEGILENDQMEHSEKVREMKKV 749 >AC006651-6|AAF39868.1| 833|Caenorhabditis elegans Hypothetical protein H06I04.3a protein. Length = 833 Score = 32.3 bits (70), Expect = 0.32 Identities = 28/114 (24%), Positives = 48/114 (42%), Gaps = 9/114 (7%) Frame = +1 Query: 121 VGIQLKFSFSNKNSVRMSFWNPGTKNEEDLSQLMHIFPKKGYKKIGPLTKLQI------- 279 +G Q+ +S ++ WN N+EDL KK Y K P+TK Q+ Sbjct: 636 IGEQMIYSAKAARNLEDEAWNRYANNDEDLPDWFADDEKKHYFKQTPVTKEQVALYRERM 695 Query: 280 --INALDNGQCKMEIAKKYGVNPQTISNMYRKKEYILHKYTQTYSTLVQDVRSV 435 NA + + A+K + + + +K E IL +S V++++ V Sbjct: 696 REFNARPSKKVAEAKARKQKKMQRKLESAKKKAEGILENDQMEHSEKVREMKKV 749 >AC006651-8|AAX22286.1| 716|Caenorhabditis elegans Hypothetical protein H06I04.3b protein. Length = 716 Score = 31.1 bits (67), Expect = 0.73 Identities = 17/53 (32%), Positives = 25/53 (47%) Frame = +1 Query: 121 VGIQLKFSFSNKNSVRMSFWNPGTKNEEDLSQLMHIFPKKGYKKIGPLTKLQI 279 +G Q+ +S ++ WN N+EDL KK Y K P+TK Q+ Sbjct: 636 IGEQMIYSAKAARNLEDEAWNRYANNDEDLPDWFADDEKKHYFKQTPVTKEQV 688 >AF098996-3|AAC68707.2| 349|Caenorhabditis elegans Serpentine receptor, class w protein79 protein. Length = 349 Score = 28.7 bits (61), Expect = 3.9 Identities = 16/41 (39%), Positives = 24/41 (58%) Frame = -1 Query: 446 LSRSTERTSCTSVLYVCVYLCKIYSFFLYILLIVWGFTPYF 324 L+RS+ RTS T+ L + + +C I +L IL +W YF Sbjct: 42 LTRSSMRTSSTNSLMIGIAICDI--LYLSILAELWIRNAYF 80 >AF047661-4|AAC04435.2| 931|Caenorhabditis elegans Hypothetical protein M70.1 protein. Length = 931 Score = 27.5 bits (58), Expect = 9.1 Identities = 21/76 (27%), Positives = 40/76 (52%), Gaps = 2/76 (2%) Frame = +1 Query: 262 LTKLQIINALDNGQCKMEIAKKYGVNP--QTISNMYRKKEYILHKYTQTYSTLVQDVRSV 435 ++K +N++D +E KK V + +S + + I KYT +S VQD++ + Sbjct: 276 ISKTSDVNSMD---ADIENIKKLPVTTIFKMMSTVASRSTNIFGKYTAGFSNGVQDLQKI 332 Query: 436 DLDKVLFEWFKSETQN 483 ++D + EW + +T N Sbjct: 333 EVD-LKDEWIQ-KTMN 346 >AF003146-2|AAB54201.1| 228|Caenorhabditis elegans Hypothetical protein F56F4.4 protein. Length = 228 Score = 27.5 bits (58), Expect = 9.1 Identities = 19/81 (23%), Positives = 35/81 (43%) Frame = +1 Query: 187 GTKNEEDLSQLMHIFPKKGYKKIGPLTKLQIINALDNGQCKMEIAKKYGVNPQTISNMYR 366 G K+EE +L K+ ++ + +LQI NG E ++ + +S + Sbjct: 152 GYKDEEKKKEL-----KRKLDEVTKIVELQIAEKEQNGLNHKEAKRETDAARRKLSKEIK 206 Query: 367 KKEYILHKYTQTYSTLVQDVR 429 K + HKY T V+ ++ Sbjct: 207 KSNNMQHKYKSTSRETVKKIK 227 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 14,007,300 Number of Sequences: 27780 Number of extensions: 286641 Number of successful extensions: 808 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 782 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 808 length of database: 12,740,198 effective HSP length: 79 effective length of database: 10,545,578 effective search space used: 1497472076 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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