Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov11f02
(665 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q7PXH4 Cluster: ENSANGP00000016819; n=2; Culicidae|Rep:... 164 1e-39
UniRef50_UPI0000D5778B Cluster: PREDICTED: similar to CG7143-PA;... 161 1e-38
UniRef50_UPI0000DB6D74 Cluster: PREDICTED: similar to DNApol- CG... 151 1e-35
UniRef50_UPI00015B431D Cluster: PREDICTED: similar to ENSANGP000... 151 2e-35
UniRef50_Q9VNX1 Cluster: CG7143-PA; n=3; Sophophora|Rep: CG7143-... 149 6e-35
UniRef50_A7S226 Cluster: Predicted protein; n=3; Eumetazoa|Rep: ... 142 9e-33
UniRef50_Q5JLR9 Cluster: Putative DNA polymerase; n=2; Oryza sat... 129 5e-29
UniRef50_A2WV83 Cluster: Putative uncharacterized protein; n=1; ... 129 5e-29
UniRef50_A4ZYA8 Cluster: Translesion synthesis DNA polymerase et... 128 9e-29
UniRef50_Q6DCL9 Cluster: Polh-prov protein; n=6; Tetrapoda|Rep: ... 120 2e-26
UniRef50_Q9Y253 Cluster: DNA polymerase eta; n=17; Mammalia|Rep:... 119 5e-26
UniRef50_Q0V979 Cluster: Zgc:136881; n=4; Danio rerio|Rep: Zgc:1... 118 1e-25
UniRef50_UPI000065E61F Cluster: DNA polymerase eta (EC 2.7.7.7) ... 115 1e-24
UniRef50_Q4SL60 Cluster: Chromosome 17 SCAF14563, whole genome s... 114 2e-24
UniRef50_Q5BVL2 Cluster: SJCHGC04877 protein; n=1; Schistosoma j... 107 2e-22
UniRef50_O17219 Cluster: Polh (Dna polymerase eta) homolog prote... 94 2e-18
UniRef50_Q9UNA4 Cluster: DNA polymerase iota; n=28; Euteleostomi... 68 2e-10
UniRef50_Q0IJ37 Cluster: DNA polymerase iota; n=2; Xenopus tropi... 67 3e-10
UniRef50_A0DAQ7 Cluster: Chromosome undetermined scaffold_43, wh... 63 7e-09
UniRef50_Q175B7 Cluster: DNA polymerase iota; n=2; Culicidae|Rep... 62 1e-08
UniRef50_Q568P0 Cluster: Zgc:110185; n=2; Danio rerio|Rep: Zgc:1... 62 2e-08
UniRef50_Q00YX1 Cluster: Translesion DNA polymerase-REV1 deoxycy... 62 2e-08
UniRef50_A1CAF9 Cluster: Sister chromatid cohesion protein (Eso1... 61 2e-08
UniRef50_UPI0000DB6FEF Cluster: PREDICTED: similar to DNApol- CG... 61 3e-08
UniRef50_Q6CDC9 Cluster: Yarrowia lipolytica chromosome C of str... 61 3e-08
UniRef50_A7SBP1 Cluster: Predicted protein; n=1; Nematostella ve... 60 4e-08
UniRef50_UPI0000E48503 Cluster: PREDICTED: hypothetical protein;... 60 6e-08
UniRef50_UPI0000D56959 Cluster: PREDICTED: similar to CG7602-PA,... 59 8e-08
UniRef50_Q3ABL2 Cluster: DNA polymerase IV-AMBIGUITY; n=1; Carbo... 59 8e-08
UniRef50_Q8EQ56 Cluster: DNA polymerase IV; n=61; Bacillaceae|Re... 59 8e-08
UniRef50_Q98NW7 Cluster: DNA polymerase IV 3; n=25; Bacteria|Rep... 59 1e-07
UniRef50_A5WGS2 Cluster: DNA-directed DNA polymerase; n=2; Psych... 58 1e-07
UniRef50_A7QW56 Cluster: Chromosome chr3 scaffold_199, whole gen... 58 2e-07
UniRef50_Q6MQV5 Cluster: DNA polymerase IV; n=4; Proteobacteria|... 58 3e-07
UniRef50_A7AL65 Cluster: Putative uncharacterized protein; n=1; ... 58 3e-07
UniRef50_Q98JM5 Cluster: DNA polymerase IV 2; n=2; Mesorhizobium... 57 3e-07
UniRef50_Q88V07 Cluster: DNA polymerase IV; n=19; Lactobacillale... 57 4e-07
UniRef50_Q8UJK7 Cluster: DNA polymerase IV 2; n=27; Proteobacter... 57 4e-07
UniRef50_A6NWJ9 Cluster: Putative uncharacterized protein; n=1; ... 56 6e-07
UniRef50_A4RBE3 Cluster: Putative uncharacterized protein; n=4; ... 56 6e-07
UniRef50_O42917 Cluster: N-acetyltransferase eso1; n=1; Schizosa... 56 6e-07
UniRef50_Q9PQ53 Cluster: DNA polymerase IV; n=2; Ureaplasma parv... 56 6e-07
UniRef50_Q83EN5 Cluster: DNA-damage-inducible protein P; n=4; Ba... 56 8e-07
UniRef50_Q38C71 Cluster: DNA polymerase eta, putative; n=3; Tryp... 56 8e-07
UniRef50_P54560 Cluster: DNA polymerase IV 2; n=4; Bacillus|Rep:... 56 8e-07
UniRef50_Q4QCF2 Cluster: DNA polymerase eta, putative; n=3; Leis... 56 1e-06
UniRef50_A2YGF9 Cluster: Putative uncharacterized protein; n=3; ... 55 1e-06
UniRef50_P96022 Cluster: DNA polymerase IV; n=9; Sulfolobaceae|R... 55 1e-06
UniRef50_UPI000023CC7C Cluster: hypothetical protein FG06286.1; ... 55 2e-06
UniRef50_Q7R5M9 Cluster: GLP_487_58318_60345; n=1; Giardia lambl... 55 2e-06
UniRef50_Q9VHV1 Cluster: CG7602-PA, isoform A; n=2; Sophophora|R... 54 2e-06
UniRef50_UPI00015B5F58 Cluster: PREDICTED: similar to CG7602-PA;... 54 3e-06
UniRef50_UPI000023E7DE Cluster: hypothetical protein FG01035.1; ... 54 3e-06
UniRef50_Q2LU75 Cluster: DNA polymerase IV; n=1; Syntrophus acid... 54 3e-06
UniRef50_A1HLX7 Cluster: DNA-directed DNA polymerase; n=1; Therm... 54 3e-06
UniRef50_Q0U034 Cluster: Putative uncharacterized protein; n=4; ... 54 3e-06
UniRef50_Q2L7B2 Cluster: REV1; n=5; Neurospora|Rep: REV1 - Neuro... 54 4e-06
UniRef50_Q97SC7 Cluster: DNA polymerase IV; n=37; Bacilli|Rep: D... 54 4e-06
UniRef50_Q62IX2 Cluster: DNA polymerase IV; n=32; Bacteria|Rep: ... 53 5e-06
UniRef50_Q8DBI7 Cluster: DNA polymerase IV; n=68; Gammaproteobac... 53 5e-06
UniRef50_A6DIV6 Cluster: DNA polymerase IV; n=1; Lentisphaera ar... 53 7e-06
UniRef50_A5N2U5 Cluster: DinB; n=3; Clostridium|Rep: DinB - Clos... 52 9e-06
UniRef50_A5EBX2 Cluster: DNA polymerase IV; n=2; Bradyrhizobiace... 52 9e-06
UniRef50_A4RZL9 Cluster: Predicted protein; n=1; Ostreococcus lu... 52 9e-06
UniRef50_Q7USY7 Cluster: DNA polymerase IV; n=1; Pirellula sp.|R... 52 9e-06
UniRef50_Q7NAR2 Cluster: UmuC/DinP-like; n=1; Mycoplasma gallise... 52 1e-05
UniRef50_A2TVA1 Cluster: DNA polymerase IV; n=10; cellular organ... 52 1e-05
UniRef50_Q015N2 Cluster: DNA-directed polymerase kappa; AtPOLK; ... 52 1e-05
UniRef50_Q0UFK5 Cluster: Putative uncharacterized protein; n=1; ... 52 1e-05
UniRef50_Q9UBT6-3 Cluster: Isoform 3 of Q9UBT6 ; n=4; Catarrhini... 52 2e-05
UniRef50_Q5Q9H7 Cluster: Polymerase kappa isoform 2; n=14; Murin... 52 2e-05
UniRef50_Q74H50 Cluster: ImpB/MucB/SamB family protein; n=11; Ba... 52 2e-05
UniRef50_A0D236 Cluster: Chromosome undetermined scaffold_35, wh... 52 2e-05
UniRef50_Q4PIG2 Cluster: Putative uncharacterized protein; n=1; ... 52 2e-05
UniRef50_Q9UBT6 Cluster: DNA polymerase kappa; n=39; Tetrapoda|R... 52 2e-05
UniRef50_Q67QM6 Cluster: DinP-like DNA-damage-inducible protein;... 51 2e-05
UniRef50_Q5QZ82 Cluster: DinP; n=2; Idiomarina|Rep: DinP - Idiom... 51 2e-05
UniRef50_A6QNV6 Cluster: MGC152198 protein; n=3; Eutheria|Rep: M... 51 2e-05
UniRef50_A7F1S2 Cluster: Putative uncharacterized protein; n=1; ... 51 2e-05
UniRef50_A2QTI4 Cluster: Contig An09c0050, complete genome; n=6;... 51 2e-05
UniRef50_Q4L7K8 Cluster: DNA polymerase IV; n=16; Staphylococcus... 51 2e-05
UniRef50_Q8XK37 Cluster: DNA polymerase IV; n=29; Bacteria|Rep: ... 51 2e-05
UniRef50_Q03VU4 Cluster: Nucleotidyltransferase/DNA polymerase f... 51 3e-05
UniRef50_Q4QCF3 Cluster: DNA polymerase eta, putative; n=3; Leis... 51 3e-05
UniRef50_A4RF27 Cluster: Putative uncharacterized protein; n=1; ... 51 3e-05
UniRef50_Q8TIW3 Cluster: DNA polymerase IV; n=4; Methanosarcinac... 51 3e-05
UniRef50_Q9HQT4 Cluster: DNA polymerase IV; n=5; Halobacteriacea... 51 3e-05
UniRef50_Q4RUQ7 Cluster: Chromosome 12 SCAF14993, whole genome s... 50 4e-05
UniRef50_Q0HUM1 Cluster: DNA-directed DNA polymerase; n=25; Prot... 50 4e-05
UniRef50_A7HFE4 Cluster: DNA-directed DNA polymerase; n=1; Anaer... 50 4e-05
UniRef50_Q010L0 Cluster: Translesion DNA polymerase-REV1 deoxycy... 50 4e-05
UniRef50_Q5CPV1 Cluster: DinB/family X-type DNA polymerase; n=1;... 50 4e-05
UniRef50_Q4Q8C4 Cluster: DNA polymerase kappa, putative; n=3; Le... 50 4e-05
UniRef50_Q2UN38 Cluster: Translesion DNA polymerase - REV1 deoxy... 50 4e-05
UniRef50_Q8XZ19 Cluster: DNA polymerase IV; n=46; Bacteria|Rep: ... 50 4e-05
UniRef50_A4VCZ3 Cluster: DNA polymerase IV / kappa; n=1; Tetrahy... 50 5e-05
UniRef50_Q39ZU3 Cluster: Damage-inducible protein DinP; n=1; Pel... 50 7e-05
UniRef50_Q6TFZ1 Cluster: MucB; n=7; root|Rep: MucB - Erwinia amy... 50 7e-05
UniRef50_Q6KZW2 Cluster: DNA polymerase IV; n=3; Archaea|Rep: DN... 50 7e-05
UniRef50_A0LG84 Cluster: DNA-directed DNA polymerase; n=4; Delta... 49 9e-05
UniRef50_Q6FFG4 Cluster: DNA polymerase IV, devoid of proofreadi... 49 1e-04
UniRef50_A5FSS1 Cluster: DNA-directed DNA polymerase; n=3; Dehal... 49 1e-04
UniRef50_A1SQG1 Cluster: DNA-directed DNA polymerase; n=12; Acti... 49 1e-04
UniRef50_Q5BYF2 Cluster: SJCHGC07422 protein; n=1; Schistosoma j... 49 1e-04
UniRef50_Q2FKS4 Cluster: DNA-directed DNA polymerase; n=1; Metha... 49 1e-04
UniRef50_Q1IRF1 Cluster: DNA-directed DNA polymerase; n=2; Acido... 48 2e-04
UniRef50_O94623 Cluster: Deoxycytidyl transferase Rev1; n=3; Sch... 48 2e-04
UniRef50_Q14N03 Cluster: Putative dna polymerase iv c-terminal t... 48 2e-04
UniRef50_Q4DBR5 Cluster: DNA damage repair protein, putative; n=... 48 2e-04
UniRef50_Q5K8U2 Cluster: Putative uncharacterized protein; n=2; ... 48 2e-04
UniRef50_Q1E8M0 Cluster: Putative uncharacterized protein; n=1; ... 48 2e-04
UniRef50_P58965 Cluster: DNA polymerase IV; n=11; Clostridia|Rep... 48 2e-04
UniRef50_Q9I534 Cluster: DNA polymerase IV; n=8; Gammaproteobact... 48 2e-04
UniRef50_Q41FB7 Cluster: DNA-directed DNA polymerase; n=1; Exigu... 48 3e-04
UniRef50_Q54KS3 Cluster: Putative uncharacterized protein; n=1; ... 48 3e-04
UniRef50_Q4WQ07 Cluster: DNA polymerase iota, putative; n=5; Tri... 48 3e-04
UniRef50_A7DSF9 Cluster: DNA-directed DNA polymerase; n=1; Candi... 48 3e-04
UniRef50_Q8G430 Cluster: DNA-damage-inducible protein P; n=4; Bi... 47 4e-04
UniRef50_Q1N612 Cluster: DNA polymerase IV; n=1; Oceanobacter sp... 47 4e-04
UniRef50_A6X194 Cluster: DNA-directed DNA polymerase; n=1; Ochro... 47 4e-04
UniRef50_A6CAV0 Cluster: DNA-damage-inducible protein P; n=1; Pl... 47 4e-04
UniRef50_A3EWL3 Cluster: Polymerase ATREV1-1105; n=8; Arabidopsi... 47 4e-04
UniRef50_Q4Q268 Cluster: DNA damage repair protein, putative; n=... 47 4e-04
UniRef50_A3GH67 Cluster: DNA repair protein; n=1; Pichia stipiti... 47 4e-04
UniRef50_A7I5X9 Cluster: DNA-directed DNA polymerase; n=1; Candi... 47 4e-04
UniRef50_UPI0000DB76DA Cluster: PREDICTED: similar to Rev1 CG121... 47 5e-04
UniRef50_A7E7M1 Cluster: Putative uncharacterized protein; n=1; ... 47 5e-04
UniRef50_A6SHZ0 Cluster: Putative uncharacterized protein; n=1; ... 47 5e-04
UniRef50_A5DE10 Cluster: Putative uncharacterized protein; n=1; ... 47 5e-04
UniRef50_Q2S2C0 Cluster: Putative DNA polymerase IV; n=1; Salini... 46 6e-04
UniRef50_Q11UG7 Cluster: DNA polymerase IV; n=1; Cytophaga hutch... 46 6e-04
UniRef50_Q0FDK2 Cluster: UMUC-like DNA-repair protein; n=1; alph... 46 6e-04
UniRef50_A6QW93 Cluster: Putative uncharacterized protein; n=1; ... 46 6e-04
UniRef50_O74944 Cluster: DNA polymerase kappa; n=1; Schizosaccha... 46 6e-04
UniRef50_Q6AL48 Cluster: Probable DNA-damage-inducible protein P... 46 8e-04
UniRef50_Q5FLW9 Cluster: DNA-damage-inducible protein; n=5; Lact... 46 8e-04
UniRef50_Q2AFE9 Cluster: UMUC-like DNA-repair protein; n=1; Halo... 46 8e-04
UniRef50_A6NU31 Cluster: Putative uncharacterized protein; n=1; ... 46 8e-04
UniRef50_A2QJ22 Cluster: Contig An04c0170, complete genome; n=1;... 46 8e-04
UniRef50_Q8F8Q2 Cluster: DNA polymerase IV; n=6; Bacteria|Rep: D... 46 8e-04
UniRef50_Q18V51 Cluster: UMUC-like DNA-repair protein; n=2; Desu... 46 0.001
UniRef50_A3ZXX8 Cluster: ImpB/MucB/SamB family protein; n=1; Bla... 46 0.001
UniRef50_A0LDH9 Cluster: DNA-directed DNA polymerase; n=1; Magne... 46 0.001
UniRef50_Q04049 Cluster: DNA polymerase eta; n=4; Saccharomyceta... 46 0.001
UniRef50_A5D243 Cluster: Nucleotidyltransferase/DNA polymerase; ... 45 0.001
UniRef50_A0YE03 Cluster: DNA polymerase IV; n=1; marine gamma pr... 45 0.001
UniRef50_Q4Q8C3 Cluster: DNA polymerase kappa, putative; n=2; Le... 45 0.001
UniRef50_A7REV5 Cluster: Predicted protein; n=1; Nematostella ve... 45 0.001
UniRef50_A7H6L7 Cluster: DNA-directed DNA polymerase; n=4; Cysto... 45 0.002
UniRef50_A7BD32 Cluster: Putative uncharacterized protein; n=1; ... 45 0.002
UniRef50_Q5AHQ7 Cluster: Putative uncharacterized protein RAD30;... 45 0.002
UniRef50_A0RUK5 Cluster: Nucleotidyltransferase/DNA polymerase i... 45 0.002
UniRef50_Q2LSC9 Cluster: Nucleotidyltransferase/DNA polymerase p... 44 0.003
UniRef50_Q0AWD6 Cluster: DNA-directed DNA polymerase; n=7; Clost... 44 0.003
UniRef50_A0RN38 Cluster: DNA polymerase IV 1, putative; n=1; Cam... 44 0.003
UniRef50_Q86ZI6 Cluster: Related to DNA Polymerase iota; n=2; Ne... 44 0.003
UniRef50_A3LN71 Cluster: DNA polymerase eta subunit; n=1; Pichia... 44 0.003
UniRef50_Q9KPS5 Cluster: DNA polymerase IV; n=56; cellular organ... 44 0.003
UniRef50_Q1ZIG5 Cluster: DNA polymerase IV; n=2; Alteromonadales... 44 0.003
UniRef50_Q0BVN8 Cluster: DNA polymerase IV; n=3; Alphaproteobact... 44 0.003
UniRef50_A7D0X1 Cluster: DNA-directed DNA polymerase; n=1; Halor... 44 0.003
UniRef50_A6X583 Cluster: DNA-directed DNA polymerase; n=3; Rhizo... 44 0.004
UniRef50_Q8PT42 Cluster: DNA polymerase IV 2; n=4; Methanomicrob... 44 0.004
UniRef50_Q8E897 Cluster: SO_S mutagenesis protein RulB; n=19; Ga... 43 0.006
UniRef50_A0JV83 Cluster: DNA-directed DNA polymerase; n=12; Acti... 43 0.006
UniRef50_A5BB36 Cluster: Putative uncharacterized protein; n=1; ... 43 0.006
UniRef50_Q8REB0 Cluster: DNA polymerase IV; n=3; Fusobacterium n... 43 0.006
UniRef50_A3VPN3 Cluster: UMUC-like DNA-repair protein; n=4; Alph... 43 0.008
UniRef50_P75241 Cluster: Uncharacterized protein MG360 homolog; ... 43 0.008
UniRef50_A4F5J4 Cluster: Putative uncharacterized protein; n=1; ... 42 0.010
UniRef50_A4ECH9 Cluster: Putative uncharacterized protein; n=1; ... 42 0.010
UniRef50_Q4D5I0 Cluster: DNA polymerase kappa, putative; n=4; Tr... 42 0.010
UniRef50_Q6BM10 Cluster: Similar to YALI0C01573g Yarrowia lipoly... 42 0.010
UniRef50_Q8YC76 Cluster: DNA polymerase IV; n=57; Alphaproteobac... 42 0.010
UniRef50_Q8EWQ4 Cluster: DNA-damage repair protein MucB; n=1; My... 42 0.013
UniRef50_A4INK7 Cluster: DNA polymerase IV; n=1; Geobacillus the... 42 0.013
UniRef50_Q75EE5 Cluster: AAR136Wp; n=1; Eremothecium gossypii|Re... 42 0.013
UniRef50_Q6C2B9 Cluster: Yarrowia lipolytica chromosome F of str... 42 0.013
UniRef50_Q5KGG8 Cluster: Eta DNA polymerase, putative; n=2; Filo... 42 0.013
UniRef50_Q73P36 Cluster: DNA polymerase IV; n=1; Treponema denti... 42 0.018
UniRef50_A1D906 Cluster: DNA-directed polymerase kappa, putative... 42 0.018
UniRef50_Q0AX85 Cluster: DNA-directed DNA polymerase; n=1; Syntr... 41 0.023
UniRef50_A1SN18 Cluster: DNA-directed DNA polymerase; n=6; Actin... 41 0.023
UniRef50_O48585 Cluster: T19K24.14 protein; n=1; Arabidopsis tha... 41 0.023
UniRef50_Q2HFL9 Cluster: Putative uncharacterized protein; n=1; ... 41 0.023
UniRef50_Q09615 Cluster: Putative uncharacterized protein rev-1;... 41 0.031
UniRef50_Q6CIW8 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 41 0.031
UniRef50_Q4AAV0 Cluster: DNA polymerase IV; n=5; Mycoplasma hyop... 40 0.041
UniRef50_A7D013 Cluster: DNA-directed DNA polymerase; n=1; Opitu... 40 0.041
UniRef50_Q384G8 Cluster: DNA polymerase kappa, putative; n=11; T... 40 0.041
UniRef50_Q59Q77 Cluster: Putative uncharacterized protein REV1; ... 40 0.041
UniRef50_Q4PF20 Cluster: Putative uncharacterized protein; n=1; ... 40 0.041
UniRef50_A5DV91 Cluster: Putative uncharacterized protein; n=1; ... 40 0.041
UniRef50_Q847G6 Cluster: Putative ultraviolet light resistance p... 40 0.054
UniRef50_A3VTP3 Cluster: ImpB/MucB/SamB family protein; n=1; Par... 40 0.054
UniRef50_A1I8E9 Cluster: DNA-directed DNA polymerase; n=1; Candi... 40 0.054
UniRef50_Q015X2 Cluster: DNA polymerase iota/DNA damage inducibl... 40 0.054
UniRef50_P34409 Cluster: DNA polymerase kappa; n=2; Caenorhabdit... 40 0.054
UniRef50_UPI000050FCD1 Cluster: COG0389: Nucleotidyltransferase/... 40 0.071
UniRef50_Q1QKL2 Cluster: DNA-directed DNA polymerase; n=6; Alpha... 40 0.071
UniRef50_A6GF38 Cluster: DNA-directed DNA polymerase; n=1; Plesi... 40 0.071
UniRef50_Q6KI15 Cluster: DNA-damage repair protein; n=1; Mycopla... 39 0.094
UniRef50_Q2SS65 Cluster: ImpB/MucB/SamB family protein; n=2; Myc... 39 0.094
UniRef50_A4EK23 Cluster: DNA polymerase IV-AMBIGUITY; n=2; Rhodo... 39 0.094
UniRef50_A7AX68 Cluster: ImpB/MucB/SamB family protein; n=1; Bab... 39 0.094
UniRef50_Q9AK82 Cluster: DNA polymerase IV; n=8; Actinomycetales... 39 0.094
UniRef50_UPI00006A0370 Cluster: DNA repair protein REV1 (EC 2.7.... 39 0.12
UniRef50_Q2RNH1 Cluster: DNA-directed DNA polymerase; n=1; Rhodo... 39 0.12
UniRef50_A0K1P6 Cluster: DNA-directed DNA polymerase; n=3; Arthr... 39 0.12
UniRef50_Q6BS95 Cluster: Similar to CA1452|CaREV1 Candida albica... 39 0.12
UniRef50_Q6LIN6 Cluster: Putative uncharacterized protein T4291;... 38 0.16
UniRef50_Q0EYF1 Cluster: Putative uncharacterized protein; n=1; ... 38 0.16
UniRef50_A3XQV7 Cluster: DNA polymerase IV; n=12; Bacteroidetes|... 38 0.16
UniRef50_Q9W0P2 Cluster: CG12189-PA; n=3; Sophophora|Rep: CG1218... 38 0.16
UniRef50_UPI0000D56635 Cluster: PREDICTED: similar to CG12189-PA... 38 0.22
UniRef50_Q4Q8C5 Cluster: DNA polymerase kappa, putative; n=3; Le... 38 0.22
UniRef50_Q4S0P1 Cluster: Chromosome 2 SCAF14781, whole genome sh... 38 0.29
UniRef50_Q6F1D8 Cluster: DNA polymerase IV; n=1; Mesoplasma flor... 38 0.29
UniRef50_Q31B23 Cluster: DNA-directed DNA polymerase; n=5; Proch... 38 0.29
UniRef50_A7MTX6 Cluster: Putative uncharacterized protein; n=1; ... 38 0.29
UniRef50_Q0PGJ8 Cluster: AIBO80; n=1; Bos taurus|Rep: AIBO80 - B... 38 0.29
UniRef50_A2FMN4 Cluster: ImpB/MucB/SamB family protein; n=1; Tri... 38 0.29
UniRef50_A5E4H3 Cluster: Putative uncharacterized protein; n=1; ... 38 0.29
UniRef50_Q9UBZ9 Cluster: DNA repair protein REV1; n=32; Euteleos... 38 0.29
UniRef50_A6ET82 Cluster: Nucleotidyltransferase/DNA polymerase i... 37 0.38
UniRef50_A5GPY7 Cluster: Bacterial UmuC protein homolog; n=15; C... 37 0.38
UniRef50_P63986 Cluster: DNA polymerase IV 1; n=26; Actinomyceta... 37 0.38
UniRef50_UPI00004984F2 Cluster: deoxycytidyl transferase; n=1; E... 37 0.50
UniRef50_Q4FMY4 Cluster: UmuC; n=5; Bacteria|Rep: UmuC - Pelagib... 37 0.50
UniRef50_A6GT02 Cluster: UMUC-like DNA-repair protein; n=1; Limn... 37 0.50
UniRef50_A3TNV0 Cluster: Putative uncharacterized protein; n=1; ... 37 0.50
UniRef50_A4RD58 Cluster: Putative uncharacterized protein; n=1; ... 37 0.50
UniRef50_Q64V68 Cluster: SOS mutagenesis and repair protein UmuC... 36 0.66
UniRef50_Q6R286 Cluster: SOS inducible DNA polymerase; n=3; Ente... 36 0.66
UniRef50_Q5KPS9 Cluster: Putative uncharacterized protein; n=2; ... 36 0.66
UniRef50_Q46L62 Cluster: DNA-directed DNA polymerase; n=2; Proch... 36 0.88
UniRef50_Q2RYM0 Cluster: UmuC protein; n=2; Salinibacter ruber D... 36 0.88
UniRef50_Q2P505 Cluster: Polymerase V subunit; n=4; Xanthomonas|... 36 1.2
UniRef50_Q1NNX6 Cluster: Putative uncharacterized protein; n=1; ... 36 1.2
UniRef50_P12689 Cluster: DNA repair protein REV1; n=2; Saccharom... 36 1.2
UniRef50_P63988 Cluster: DNA polymerase IV 2; n=16; Corynebacter... 36 1.2
UniRef50_UPI0000E87FBE Cluster: DNA repair protein; n=1; Methylo... 35 1.5
UniRef50_Q5FNE8 Cluster: SOS (Error prone) mutagenesis protein U... 35 1.5
UniRef50_Q0ACU7 Cluster: DNA-directed DNA polymerase; n=2; Nitro... 35 1.5
UniRef50_A0Y5N4 Cluster: DNA polymerase IV, devoid of proofreadi... 35 1.5
UniRef50_P07375 Cluster: Protein mucB; n=124; root|Rep: Protein ... 35 1.5
UniRef50_UPI0000F1EB8F Cluster: PREDICTED: similar to Rev1S; n=3... 35 2.0
UniRef50_A6C5Y5 Cluster: UMUC-like DNA-repair protein; n=1; Plan... 35 2.0
UniRef50_A3VP13 Cluster: DNA polymerase IV; n=1; Parvularcula be... 35 2.0
UniRef50_Q8VMP6 Cluster: RuvB protein; n=4; Pseudomonas putida|R... 34 2.7
UniRef50_Q7Q6B2 Cluster: ENSANGP00000004566; n=1; Anopheles gamb... 34 2.7
UniRef50_Q6CYA8 Cluster: Similar to sgd|S0002827 Saccharomyces c... 34 2.7
UniRef50_Q4P422 Cluster: Putative uncharacterized protein; n=1; ... 34 2.7
UniRef50_Q11QJ9 Cluster: Nucleotidyltransferase/DNA polymerase i... 34 3.5
UniRef50_P22494 Cluster: Protein umuC; n=7; Gammaproteobacteria|... 34 3.5
UniRef50_Q6ZEK8 Cluster: Sll5122 protein; n=4; Chroococcales|Rep... 33 4.7
UniRef50_A3XES5 Cluster: UmuC protein; n=5; Proteobacteria|Rep: ... 33 4.7
UniRef50_A0L3I2 Cluster: DNA-directed DNA polymerase; n=1; Shewa... 33 4.7
UniRef50_Q759A8 Cluster: ADR369Cp; n=1; Eremothecium gossypii|Re... 33 4.7
UniRef50_A7TRR0 Cluster: Putative uncharacterized protein; n=1; ... 33 4.7
UniRef50_A5DN15 Cluster: Putative uncharacterized protein; n=1; ... 33 6.2
UniRef50_Q2GVP2 Cluster: Putative uncharacterized protein; n=1; ... 33 8.2
>UniRef50_Q7PXH4 Cluster: ENSANGP00000016819; n=2; Culicidae|Rep:
ENSANGP00000016819 - Anopheles gambiae str. PEST
Length = 877
Score = 164 bits (399), Expect = 1e-39
Identities = 72/91 (79%), Positives = 82/91 (90%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGD 570
RVVVL+DMDCFYCQVEEKLNP ++GKPIAVVQYNPW+GGGIIAVNY AR GVTRHMRGD
Sbjct: 15 RVVVLVDMDCFYCQVEEKLNPAIRGKPIAVVQYNPWQGGGIIAVNYPARAEGVTRHMRGD 74
Query: 571 EAKEKCPNIQLPSVPCHRGKADISKYRDAGK 663
EAK+ CP I+LP VP RGKAD+++YR+AGK
Sbjct: 75 EAKQHCPEIELPQVPQVRGKADLTRYREAGK 105
>UniRef50_UPI0000D5778B Cluster: PREDICTED: similar to CG7143-PA;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
CG7143-PA - Tribolium castaneum
Length = 679
Score = 161 bits (392), Expect = 1e-38
Identities = 74/91 (81%), Positives = 81/91 (89%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGD 570
RVVVL+DMDCFYCQVEEKLNP L+GKPIAVVQYN W+GGGIIAVNY ARD GVTRHMRG
Sbjct: 6 RVVVLVDMDCFYCQVEEKLNPALEGKPIAVVQYNAWQGGGIIAVNYPARDEGVTRHMRGF 65
Query: 571 EAKEKCPNIQLPSVPCHRGKADISKYRDAGK 663
EAK+KCP+I L VP RGKAD++KYRDAGK
Sbjct: 66 EAKKKCPSINLVQVPELRGKADLTKYRDAGK 96
>UniRef50_UPI0000DB6D74 Cluster: PREDICTED: similar to DNApol-
CG7143-PA; n=1; Apis mellifera|Rep: PREDICTED: similar
to DNApol- CG7143-PA - Apis mellifera
Length = 429
Score = 151 bits (367), Expect = 1e-35
Identities = 68/90 (75%), Positives = 77/90 (85%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGD 570
R+VVLIDMDCF+CQVE KL P+ GKP+AVVQYN W+ GGIIAVNY AR+ GVTRHMRG
Sbjct: 8 RIVVLIDMDCFFCQVETKLQPQYAGKPLAVVQYNQWQLGGIIAVNYEAREYGVTRHMRGK 67
Query: 571 EAKEKCPNIQLPSVPCHRGKADISKYRDAG 660
EAKEKCP++ L SVPC RGKADIS+YR AG
Sbjct: 68 EAKEKCPDLILVSVPCLRGKADISRYRSAG 97
>UniRef50_UPI00015B431D Cluster: PREDICTED: similar to
ENSANGP00000016819; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to ENSANGP00000016819 - Nasonia
vitripennis
Length = 1629
Score = 151 bits (365), Expect = 2e-35
Identities = 68/91 (74%), Positives = 76/91 (83%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGD 570
R+VVLIDMDCF+CQVE +L PE GKP+AVVQYN WK GGIIAVNY ARD GVTRHMRG+
Sbjct: 1000 RIVVLIDMDCFFCQVETRLKPEHAGKPLAVVQYNQWKLGGIIAVNYEARDFGVTRHMRGE 1059
Query: 571 EAKEKCPNIQLPSVPCHRGKADISKYRDAGK 663
EAKEKCP+I L VP RGKAD S+YR AG+
Sbjct: 1060 EAKEKCPDIVLAIVPSQRGKADTSRYRSAGR 1090
>UniRef50_Q9VNX1 Cluster: CG7143-PA; n=3; Sophophora|Rep: CG7143-PA
- Drosophila melanogaster (Fruit fly)
Length = 885
Score = 149 bits (361), Expect = 6e-35
Identities = 67/91 (73%), Positives = 76/91 (83%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGD 570
RVV+L+DMDCF+CQVEEK +PE + +P+AVVQYNPW+GGGIIAVNY AR GVTRHMRGD
Sbjct: 16 RVVLLVDMDCFFCQVEEKQHPEYRNRPLAVVQYNPWRGGGIIAVNYAARAKGVTRHMRGD 75
Query: 571 EAKEKCPNIQLPSVPCHRGKADISKYRDAGK 663
EAK+ CP I L VP R KAD SKYRDAGK
Sbjct: 76 EAKDLCPEIVLCQVPNIREKADTSKYRDAGK 106
>UniRef50_A7S226 Cluster: Predicted protein; n=3; Eumetazoa|Rep:
Predicted protein - Nematostella vectensis
Length = 345
Score = 142 bits (343), Expect = 9e-33
Identities = 64/90 (71%), Positives = 75/90 (83%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGD 570
RV+ L+DMDCFY QVE++ PELKGKP AVVQYN WKGGGIIAV+Y AR GVTR+MRGD
Sbjct: 6 RVIALVDMDCFYVQVEQRRCPELKGKPCAVVQYNAWKGGGIIAVSYEARACGVTRNMRGD 65
Query: 571 EAKEKCPNIQLPSVPCHRGKADISKYRDAG 660
EAK+KCP+I L VP RGKA+++ YRDAG
Sbjct: 66 EAKQKCPDIALVQVPVLRGKANLAHYRDAG 95
>UniRef50_Q5JLR9 Cluster: Putative DNA polymerase; n=2; Oryza sativa
(japonica cultivar-group)|Rep: Putative DNA polymerase -
Oryza sativa subsp. japonica (Rice)
Length = 642
Score = 129 bits (312), Expect = 5e-29
Identities = 58/90 (64%), Positives = 69/90 (76%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGD 570
RV+ +DMDCFY QVE++ NPEL+G+P AVVQYN WKGGG+IAV+Y AR GV R MRGD
Sbjct: 12 RVIAHVDMDCFYVQVEQRRNPELRGQPTAVVQYNDWKGGGLIAVSYEARKFGVKRSMRGD 71
Query: 571 EAKEKCPNIQLPSVPCHRGKADISKYRDAG 660
EAK CP+I L VP R KAD++ YR AG
Sbjct: 72 EAKMVCPSINLVQVPVARDKADLNVYRSAG 101
>UniRef50_A2WV83 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (indica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. indica
(Rice)
Length = 498
Score = 129 bits (312), Expect = 5e-29
Identities = 58/90 (64%), Positives = 69/90 (76%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGD 570
RV+ +DMDCFY QVE++ NPEL+G+P AVVQYN WKGGG+IAV+Y AR GV R MRGD
Sbjct: 12 RVIAHVDMDCFYVQVEQRRNPELRGQPTAVVQYNDWKGGGLIAVSYEARKFGVKRSMRGD 71
Query: 571 EAKEKCPNIQLPSVPCHRGKADISKYRDAG 660
EAK CP+I L VP R KAD++ YR AG
Sbjct: 72 EAKMVCPSINLVQVPVARDKADLNVYRSAG 101
>UniRef50_A4ZYA8 Cluster: Translesion synthesis DNA polymerase eta
splice variant; n=9; Magnoliophyta|Rep: Translesion
synthesis DNA polymerase eta splice variant -
Arabidopsis thaliana (Mouse-ear cress)
Length = 442
Score = 128 bits (310), Expect = 9e-29
Identities = 58/90 (64%), Positives = 68/90 (75%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGD 570
RV+ +DMDCFY QVE++ PEL+G P AVVQYN W+GGG+IAV+Y AR GV R MRGD
Sbjct: 12 RVIAHVDMDCFYVQVEQRKQPELRGLPSAVVQYNEWQGGGLIAVSYEARKCGVKRSMRGD 71
Query: 571 EAKEKCPNIQLPSVPCHRGKADISKYRDAG 660
EAK CP IQL VP RGKAD++ YR AG
Sbjct: 72 EAKAACPQIQLVQVPVARGKADLNLYRSAG 101
>UniRef50_Q6DCL9 Cluster: Polh-prov protein; n=6; Tetrapoda|Rep:
Polh-prov protein - Xenopus laevis (African clawed frog)
Length = 684
Score = 120 bits (290), Expect = 2e-26
Identities = 54/89 (60%), Positives = 68/89 (76%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGD 570
RVV L+DMDCFY QVE+++NP LK KP+ VVQY WKGGGIIAV+Y AR GVTR+M D
Sbjct: 7 RVVALVDMDCFYVQVEQRMNPALKNKPVVVVQYKTWKGGGIIAVSYEARAFGVTRNMFAD 66
Query: 571 EAKEKCPNIQLPSVPCHRGKADISKYRDA 657
+AK+ C ++QL V GKAD++ YR+A
Sbjct: 67 DAKKLCADLQLARVREAHGKADLTHYREA 95
>UniRef50_Q9Y253 Cluster: DNA polymerase eta; n=17; Mammalia|Rep:
DNA polymerase eta - Homo sapiens (Human)
Length = 713
Score = 119 bits (287), Expect = 5e-26
Identities = 54/89 (60%), Positives = 68/89 (76%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGD 570
RVV L+DMDCF+ QVE++ NP L+ KP AVVQY WKGGGIIAV+Y AR GVTR M D
Sbjct: 7 RVVALVDMDCFFVQVEQRQNPHLRNKPCAVVQYKSWKGGGIIAVSYEARAFGVTRSMWAD 66
Query: 571 EAKEKCPNIQLPSVPCHRGKADISKYRDA 657
+AK+ CP++ L V RGKA+++KYR+A
Sbjct: 67 DAKKLCPDLLLAQVRESRGKANLTKYREA 95
>UniRef50_Q0V979 Cluster: Zgc:136881; n=4; Danio rerio|Rep:
Zgc:136881 - Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 294
Score = 118 bits (285), Expect = 1e-25
Identities = 53/89 (59%), Positives = 67/89 (75%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGD 570
RVV L+DMDCFY QVE++L PELK KP V QY WKGGGIIAV+Y AR GV R+M D
Sbjct: 7 RVVALVDMDCFYVQVEQRLKPELKNKPCVVAQYKTWKGGGIIAVSYEARAHGVGRNMFAD 66
Query: 571 EAKEKCPNIQLPSVPCHRGKADISKYRDA 657
+A++ CP++Q+ VP GKAD++ YR+A
Sbjct: 67 DARKLCPDLQVARVPEAHGKADLTHYREA 95
>UniRef50_UPI000065E61F Cluster: DNA polymerase eta (EC 2.7.7.7)
(RAD30 homolog A) (Xeroderma pigmentosum variant type
protein).; n=1; Takifugu rubripes|Rep: DNA polymerase
eta (EC 2.7.7.7) (RAD30 homolog A) (Xeroderma
pigmentosum variant type protein). - Takifugu rubripes
Length = 775
Score = 115 bits (276), Expect = 1e-24
Identities = 53/89 (59%), Positives = 66/89 (74%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGD 570
RVV L+DMDCFY QVE++LNP LK P V QY WKGGGIIAV+Y AR GVTR+M D
Sbjct: 7 RVVALVDMDCFYVQVEQRLNPALKNTPCVVAQYKTWKGGGIIAVSYEARAHGVTRNMWVD 66
Query: 571 EAKEKCPNIQLPSVPCHRGKADISKYRDA 657
+AK+ CP++Q+ V GKAD++ YR+A
Sbjct: 67 DAKKLCPDLQVARVRESHGKADLTFYREA 95
>UniRef50_Q4SL60 Cluster: Chromosome 17 SCAF14563, whole genome
shotgun sequence; n=2; root|Rep: Chromosome 17
SCAF14563, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 671
Score = 114 bits (275), Expect = 2e-24
Identities = 52/89 (58%), Positives = 66/89 (74%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGD 570
RVV L+DMDCFY QVE+++NP LK P V QY WKGGGIIAV+Y AR GVTR+M D
Sbjct: 7 RVVALVDMDCFYVQVEQRINPALKNTPCVVAQYKTWKGGGIIAVSYEARAHGVTRNMWVD 66
Query: 571 EAKEKCPNIQLPSVPCHRGKADISKYRDA 657
+AK+ CP++Q+ V GKAD++ YR+A
Sbjct: 67 DAKKLCPDLQVARVRESHGKADLTLYREA 95
>UniRef50_Q5BVL2 Cluster: SJCHGC04877 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC04877 protein - Schistosoma
japonicum (Blood fluke)
Length = 193
Score = 107 bits (257), Expect = 2e-22
Identities = 48/89 (53%), Positives = 65/89 (73%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGD 570
R+V+L+DMDCFY QVE++ PE KGKP V QY+ WKGGG +A++Y AR LG+ R M GD
Sbjct: 5 RIVMLLDMDCFYVQVEQREAPETKGKPCIVSQYSEWKGGGALAISYEARALGIKRGMFGD 64
Query: 571 EAKEKCPNIQLPSVPCHRGKADISKYRDA 657
E + P++ + VP RGKA+++KYR A
Sbjct: 65 EIRAHYPDVIIFKVPEKRGKAELTKYRVA 93
>UniRef50_O17219 Cluster: Polh (Dna polymerase eta) homolog protein
1; n=2; Caenorhabditis|Rep: Polh (Dna polymerase eta)
homolog protein 1 - Caenorhabditis elegans
Length = 584
Score = 94.3 bits (224), Expect = 2e-18
Identities = 51/92 (55%), Positives = 62/92 (67%), Gaps = 3/92 (3%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYN-PWKGGGIIAVNYVARDLGVTRHMRG 567
RV+ LIDMDCFY QVE++ NP L G+P+ VVQ++ GGI+AV+Y AR GV R M
Sbjct: 3 RVISLIDMDCFYAQVEQRDNPSLWGQPVIVVQHSRQGIEGGILAVSYEARPFGVKRGMTV 62
Query: 568 DEAKEKCPNIQLPSVPC--HRGKADISKYRDA 657
EAK KCP I + VP + KADI KYRDA
Sbjct: 63 AEAKLKCPQISICHVPIGEYVDKADIQKYRDA 94
>UniRef50_Q9UNA4 Cluster: DNA polymerase iota; n=28;
Euteleostomi|Rep: DNA polymerase iota - Homo sapiens
(Human)
Length = 715
Score = 67.7 bits (158), Expect = 2e-10
Identities = 39/88 (44%), Positives = 54/88 (61%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGD 570
RV+V +D+DCFY QVE NPELK KP+ V Q ++ NY AR LGV + M
Sbjct: 28 RVIVHVDLDCFYAQVEMISNPELKDKPLGVQQKYL-----VVTCNYEARKLGVKKLMNVR 82
Query: 571 EAKEKCPNIQLPSVPCHRGKADISKYRD 654
+AKEKCP + L + G+ D+++YR+
Sbjct: 83 DAKEKCPQLVLVN-----GE-DLTRYRE 104
>UniRef50_Q0IJ37 Cluster: DNA polymerase iota; n=2; Xenopus
tropicalis|Rep: DNA polymerase iota - Xenopus tropicalis
(Western clawed frog) (Silurana tropicalis)
Length = 742
Score = 67.3 bits (157), Expect = 3e-10
Identities = 35/73 (47%), Positives = 45/73 (61%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGD 570
RV+V IDMDCFY QVE NPEL+ KP+ + Q ++ NY AR GVT+ M
Sbjct: 50 RVIVHIDMDCFYAQVEMIRNPELRNKPLGIQQKYI-----VVTCNYEARKFGVTKLMLIK 104
Query: 571 EAKEKCPNIQLPS 609
+A+EKCP + L S
Sbjct: 105 DAREKCPQLVLVS 117
>UniRef50_A0DAQ7 Cluster: Chromosome undetermined scaffold_43, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_43,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 521
Score = 62.9 bits (146), Expect = 7e-09
Identities = 35/91 (38%), Positives = 51/91 (56%), Gaps = 3/91 (3%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGD 570
+V + IDMD +Y Q E+KL + +P+ Q+N +IA+NY ARD G+ R M +
Sbjct: 6 QVYIHIDMDAYYAQAEQKLLNIPEDQPVCARQWN-----SLIAINYPARDAGIKRGMLSE 60
Query: 571 EAKEKCPNIQLPSVPCHR---GKADISKYRD 654
EA + CPN+ LP V + GK S +D
Sbjct: 61 EAIKLCPNVMLPHVETFKVIDGKMVFSTLKD 91
>UniRef50_Q175B7 Cluster: DNA polymerase iota; n=2; Culicidae|Rep:
DNA polymerase iota - Aedes aegypti (Yellowfever
mosquito)
Length = 654
Score = 62.1 bits (144), Expect = 1e-08
Identities = 31/72 (43%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQ-YNPWKGGGIIAVNYVARDLGVTRHMRG 567
RV++ +DMD FY QVEE L+P LK KP+ V Q +N ++ NY+AR+ G+ + M
Sbjct: 15 RVIIHVDMDYFYAQVEEILDPSLKDKPVGVKQRFN------VVTSNYIAREYGIKKMMLI 68
Query: 568 DEAKEKCPNIQL 603
+EA + CP++ L
Sbjct: 69 NEATKLCPDLVL 80
>UniRef50_Q568P0 Cluster: Zgc:110185; n=2; Danio rerio|Rep:
Zgc:110185 - Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 710
Score = 61.7 bits (143), Expect = 2e-08
Identities = 32/71 (45%), Positives = 43/71 (60%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGD 570
RV++ D+DCFY QVE NP L+ KP+ + Q I+ NYVAR+LGV + M
Sbjct: 37 RVILHFDLDCFYAQVEMIRNPALRTKPLGIQQKYI-----IVTSNYVARELGVNKLMSVT 91
Query: 571 EAKEKCPNIQL 603
+A EKCP + L
Sbjct: 92 DAVEKCPQLVL 102
>UniRef50_Q00YX1 Cluster: Translesion DNA polymerase-REV1
deoxycytidyl transferase; n=2; Ostreococcus|Rep:
Translesion DNA polymerase-REV1 deoxycytidyl transferase
- Ostreococcus tauri
Length = 595
Score = 61.7 bits (143), Expect = 2e-08
Identities = 41/111 (36%), Positives = 56/111 (50%), Gaps = 21/111 (18%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGI------------------- 513
RVV +D+D FYCQVE + P+ V QY+P++ GG+
Sbjct: 6 RVVAHLDLDAFYCQVERAAHGIDVNVPLVVAQYDPFERGGVRTRDQGARRILRDGLERHS 65
Query: 514 -IAVNYVARDLGVTRHMRGDEAKEKC-PNIQLPSVPCHRGKADISKYRDAG 660
IAV+Y AR GV R+MR +A+ C + VP R KAD++ YR AG
Sbjct: 66 LIAVSYEARARGVKRNMRAIDARRLCGDGAVVVQVPTRRSKADLTAYRRAG 116
>UniRef50_A1CAF9 Cluster: Sister chromatid cohesion protein (Eso1),
putative; n=7; Trichocomaceae|Rep: Sister chromatid
cohesion protein (Eso1), putative - Aspergillus clavatus
Length = 674
Score = 61.3 bits (142), Expect = 2e-08
Identities = 36/89 (40%), Positives = 49/89 (55%), Gaps = 1/89 (1%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGD 570
RV+ ID+D FY Q E + + P+AV Q++ +IA+NY AR G+TR M D
Sbjct: 44 RVIAHIDLDAFYAQCEMVRLAKPRETPLAVRQWD-----SLIAINYPARSFGITRMMSAD 98
Query: 571 EAKEKCPNIQLPSVPCHR-GKADISKYRD 654
EA++ CP I L V R G+ YRD
Sbjct: 99 EARKHCPEIVLQHVATFREGEGGQWAYRD 127
>UniRef50_UPI0000DB6FEF Cluster: PREDICTED: similar to DNApol-
CG7602-PA, isoform A; n=1; Apis mellifera|Rep:
PREDICTED: similar to DNApol- CG7602-PA, isoform A -
Apis mellifera
Length = 540
Score = 60.9 bits (141), Expect = 3e-08
Identities = 29/71 (40%), Positives = 42/71 (59%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGD 570
R ++ ID+DCFY QVE +PEL+ KP+ V Q N ++ NY+AR+ G+ + M
Sbjct: 14 RTIIHIDVDCFYAQVEMLRHPELENKPLGVQQKNM-----VVTSNYIAREYGIKKCMSVQ 68
Query: 571 EAKEKCPNIQL 603
EA CP + L
Sbjct: 69 EALRLCPGLAL 79
>UniRef50_Q6CDC9 Cluster: Yarrowia lipolytica chromosome C of strain
CLIB122 of Yarrowia lipolytica; n=1; Yarrowia
lipolytica|Rep: Yarrowia lipolytica chromosome C of
strain CLIB122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 640
Score = 60.9 bits (141), Expect = 3e-08
Identities = 32/84 (38%), Positives = 48/84 (57%)
Frame = +1
Query: 397 VVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGDEA 576
+V +DMD F+ QVE+ G P+A Q++ G+IAV Y AR G+TRHMR EA
Sbjct: 26 IVHLDMDAFFAQVEQVRLGLPPGTPVACRQWD-----GLIAVGYAARASGITRHMRAPEA 80
Query: 577 KEKCPNIQLPSVPCHRGKADISKY 648
++ CPN+ + + D+ +Y
Sbjct: 81 QKLCPNLVMAHAASFKRGEDMWEY 104
>UniRef50_A7SBP1 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 403
Score = 60.5 bits (140), Expect = 4e-08
Identities = 35/88 (39%), Positives = 56/88 (63%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGD 570
RV+V ID+DCFY QVE NP L+ +P+ V Q + ++ NYVAR +G+ + +
Sbjct: 3 RVIVHIDIDCFYAQVEMIRNPCLRDRPVGVSQKHI-----LVTCNYVARAMGLKKLISLA 57
Query: 571 EAKEKCPNIQLPSVPCHRGKADISKYRD 654
EAK+KCP++ + + G+ D++KYR+
Sbjct: 58 EAKKKCPDLVIIN-----GE-DLTKYRE 79
>UniRef50_UPI0000E48503 Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 642
Score = 59.7 bits (138), Expect = 6e-08
Identities = 32/73 (43%), Positives = 43/73 (58%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGD 570
R +V ID+DCFY QVE NP L+ KP+ + Q N ++ NYVAR GV++
Sbjct: 65 RTIVHIDLDCFYAQVEMLRNPTLRDKPLGIQQKNI-----VVTTNYVARARGVSKLSYIK 119
Query: 571 EAKEKCPNIQLPS 609
EA KCP++ L S
Sbjct: 120 EALIKCPDLVLVS 132
>UniRef50_UPI0000D56959 Cluster: PREDICTED: similar to CG7602-PA,
isoform A; n=1; Tribolium castaneum|Rep: PREDICTED:
similar to CG7602-PA, isoform A - Tribolium castaneum
Length = 537
Score = 59.3 bits (137), Expect = 8e-08
Identities = 28/71 (39%), Positives = 42/71 (59%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGD 570
R ++ ID+DCFY QVE NP L+ P+ + Q N ++ NY AR+ G+ + M
Sbjct: 9 RTIIHIDLDCFYAQVEMNKNPSLRTVPLGIQQKNI-----VVTSNYTAREFGIKKCMLIP 63
Query: 571 EAKEKCPNIQL 603
EAK+ CP++ L
Sbjct: 64 EAKKLCPSLVL 74
>UniRef50_Q3ABL2 Cluster: DNA polymerase IV-AMBIGUITY; n=1;
Carboxydothermus hydrogenoformans Z-2901|Rep: DNA
polymerase IV-AMBIGUITY - Carboxydothermus
hydrogenoformans (strain Z-2901 / DSM 6008)
Length = 391
Score = 59.3 bits (137), Expect = 8e-08
Identities = 30/68 (44%), Positives = 42/68 (61%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGD 570
RV++ +DMD F+ VE++ NPELKGKP+ +V P + G + A +Y AR GV M
Sbjct: 4 RVIIHVDMDAFFAAVEQRDNPELKGKPV-IVGGVPGERGVVAAASYEARKFGVRSAMSLW 62
Query: 571 EAKEKCPN 594
EA CP+
Sbjct: 63 EAARLCPH 70
>UniRef50_Q8EQ56 Cluster: DNA polymerase IV; n=61; Bacillaceae|Rep:
DNA polymerase IV - Oceanobacillus iheyensis
Length = 419
Score = 59.3 bits (137), Expect = 8e-08
Identities = 30/71 (42%), Positives = 42/71 (59%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGD 570
R++ IDM+CFY VE NP LKGKP+A+ + G I+ +Y AR GV M
Sbjct: 10 RIIFHIDMNCFYASVEMAHNPSLKGKPLAIAGNPEERKGIIVTSSYEARGKGVKTTMPIW 69
Query: 571 EAKEKCPNIQL 603
+AK+ CP++ L
Sbjct: 70 QAKKLCPDLIL 80
>UniRef50_Q98NW7 Cluster: DNA polymerase IV 3; n=25; Bacteria|Rep:
DNA polymerase IV 3 - Rhizobium loti (Mesorhizobium
loti)
Length = 361
Score = 58.8 bits (136), Expect = 1e-07
Identities = 30/69 (43%), Positives = 40/69 (57%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGD 570
R ++ +DMD FY VE++ NPEL+GKP+AV G + A +Y AR GV M
Sbjct: 10 RKIIHVDMDAFYASVEQRDNPELRGKPLAV--GGAAARGVVAAASYEARAFGVRSAMPSV 67
Query: 571 EAKEKCPNI 597
AK KCP +
Sbjct: 68 TAKRKCPEL 76
>UniRef50_A5WGS2 Cluster: DNA-directed DNA polymerase; n=2;
Psychrobacter|Rep: DNA-directed DNA polymerase -
Psychrobacter sp. PRwf-1
Length = 369
Score = 58.4 bits (135), Expect = 1e-07
Identities = 29/67 (43%), Positives = 41/67 (61%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGD 570
R ++ +DMD FY VE++ NP+L+GKP+ VV +P G + A +Y R GV M
Sbjct: 17 RKIIHLDMDAFYASVEQRDNPQLRGKPL-VVGGDPSGRGVVAAASYEIRKFGVRSAMSCY 75
Query: 571 EAKEKCP 591
EAK +CP
Sbjct: 76 EAKRRCP 82
>UniRef50_A7QW56 Cluster: Chromosome chr3 scaffold_199, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr3 scaffold_199, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 1130
Score = 58.0 bits (134), Expect = 2e-07
Identities = 30/69 (43%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Frame = +1
Query: 394 VVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKG-GGIIAVNYVARDLGVTRHMRGD 570
V++ +DMDCF+ V + NPEL+ KP+AV N KG I + NY ARD GV +
Sbjct: 388 VIIHMDMDCFFVSVVIRNNPELQDKPVAVCHSNNPKGTAEISSANYPARDYGVKAGIFVR 447
Query: 571 EAKEKCPNI 597
+AK CP++
Sbjct: 448 DAKALCPHL 456
>UniRef50_Q6MQV5 Cluster: DNA polymerase IV; n=4;
Proteobacteria|Rep: DNA polymerase IV - Bdellovibrio
bacteriovorus
Length = 356
Score = 57.6 bits (133), Expect = 3e-07
Identities = 36/90 (40%), Positives = 46/90 (51%), Gaps = 2/90 (2%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGD 570
R ++ IDMDCFY VE K PELKGKP+ + P + +Y AR GV M
Sbjct: 2 RKIIHIDMDCFYAAVEVKYRPELKGKPLG-IGGPPNTRSVLCTASYEARKFGVRSAMPSS 60
Query: 571 EAKEKCPNIQLPSVPCHRG--KADISKYRD 654
+A CP QL +P H KA+ K R+
Sbjct: 61 QAVRLCP--QLVLIPPHFDLYKAESRKVRE 88
>UniRef50_A7AL65 Cluster: Putative uncharacterized protein; n=1;
Parabacteroides merdae ATCC 43184|Rep: Putative
uncharacterized protein - Parabacteroides merdae ATCC
43184
Length = 364
Score = 57.6 bits (133), Expect = 3e-07
Identities = 30/73 (41%), Positives = 40/73 (54%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGD 570
R ++ IDMD FY VE++ NPEL+G P+AV + G + A +Y AR GV M
Sbjct: 3 RKIIHIDMDAFYASVEQRDNPELRGIPLAVGHAE--ERGVVAAASYEARKFGVRSAMSSQ 60
Query: 571 EAKEKCPNIQLPS 609
AK CP + S
Sbjct: 61 RAKRLCPQLTFVS 73
>UniRef50_Q98JM5 Cluster: DNA polymerase IV 2; n=2;
Mesorhizobium|Rep: DNA polymerase IV 2 - Rhizobium loti
(Mesorhizobium loti)
Length = 415
Score = 57.2 bits (132), Expect = 3e-07
Identities = 29/63 (46%), Positives = 39/63 (61%)
Frame = +1
Query: 409 DMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGDEAKEKC 588
D+D FY VE+ L+P L+GKPIAV GG ++A +Y AR GV M G +A+E C
Sbjct: 11 DLDAFYASVEQLLDPSLRGKPIAV------GGGVVLAASYEARAFGVRGGMPGRKARELC 64
Query: 589 PNI 597
P +
Sbjct: 65 PQL 67
>UniRef50_Q88V07 Cluster: DNA polymerase IV; n=19;
Lactobacillales|Rep: DNA polymerase IV - Lactobacillus
plantarum
Length = 366
Score = 56.8 bits (131), Expect = 4e-07
Identities = 30/83 (36%), Positives = 47/83 (56%), Gaps = 5/83 (6%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGG---IIAVNYVARDLGVTRHM 561
R ++ +DMD FY +EE+ +P K +P+ V+ ++P + GG + NYVAR GV M
Sbjct: 5 RKIIHVDMDAFYASIEEREHPAYKTQPL-VIAHDPRQTGGRGVVTTANYVARQFGVHSAM 63
Query: 562 RGDEAKEKCPN--IQLPSVPCHR 624
+A E CP + P+ P +R
Sbjct: 64 PAAKALELCPTAVFKTPNFPLYR 86
>UniRef50_Q8UJK7 Cluster: DNA polymerase IV 2; n=27;
Proteobacteria|Rep: DNA polymerase IV 2 - Agrobacterium
tumefaciens (strain C58 / ATCC 33970)
Length = 357
Score = 56.8 bits (131), Expect = 4e-07
Identities = 27/69 (39%), Positives = 42/69 (60%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGD 570
R ++ +DMD FY VE++ NPEL+G+P+AV + G + A +Y AR+ GV M
Sbjct: 2 RKIIHVDMDAFYASVEQRDNPELRGRPVAV--GSAAARGVVAAASYEAREFGVRSAMPSV 59
Query: 571 EAKEKCPNI 597
A +CP++
Sbjct: 60 TAARRCPDL 68
>UniRef50_A6NWJ9 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 424
Score = 56.4 bits (130), Expect = 6e-07
Identities = 28/75 (37%), Positives = 45/75 (60%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGD 570
R ++ DM+CFY VE + +PEL+ P+AV + G ++ NY+A+ GV M
Sbjct: 12 RHILHCDMNCFYASVEMQRHPELRDTPLAVCGSQEERHGIVLTANYIAKPYGVKTGMAIW 71
Query: 571 EAKEKCPNIQLPSVP 615
+AK++CP QL ++P
Sbjct: 72 QAKQRCP--QLVTLP 84
>UniRef50_A4RBE3 Cluster: Putative uncharacterized protein; n=4;
Sordariomycetes|Rep: Putative uncharacterized protein -
Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 668
Score = 56.4 bits (130), Expect = 6e-07
Identities = 34/87 (39%), Positives = 48/87 (55%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGD 570
RV+ ID+D FY Q E + +P+AV Q W+G +IAVNY AR G++RH D
Sbjct: 48 RVISHIDLDAFYAQCEMVRLGVDEDRPLAVQQ---WQG--LIAVNYPARKFGISRHCAID 102
Query: 571 EAKEKCPNIQLPSVPCHRGKADISKYR 651
+A + CP +Q+ V R + YR
Sbjct: 103 DALKLCPELQVQHVATWREGDNTWAYR 129
>UniRef50_O42917 Cluster: N-acetyltransferase eso1; n=1;
Schizosaccharomyces pombe|Rep: N-acetyltransferase eso1
- Schizosaccharomyces pombe (Fission yeast)
Length = 872
Score = 56.4 bits (130), Expect = 6e-07
Identities = 35/88 (39%), Positives = 45/88 (51%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGD 570
RVV ID D FY QVE P+AV Q W+G +IAVNY AR ++RH
Sbjct: 27 RVVAHIDQDAFYAQVESVRLGLDHSVPLAVQQ---WQG--LIAVNYAARAANISRHETVT 81
Query: 571 EAKEKCPNIQLPSVPCHRGKADISKYRD 654
EAK+KCP + V + +KY +
Sbjct: 82 EAKKKCPELCTAHVKTWKAGESEAKYHE 109
>UniRef50_Q9PQ53 Cluster: DNA polymerase IV; n=2; Ureaplasma
parvum|Rep: DNA polymerase IV - Ureaplasma parvum
(Ureaplasma urealyticum biotype 1)
Length = 360
Score = 56.4 bits (130), Expect = 6e-07
Identities = 34/74 (45%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGD 570
++++ +D+D FY V E L+PE K PIAV N + G I + NY+AR GV M
Sbjct: 7 KIIMHLDIDAFYATVSELLHPEYKNFPIAVGSLNS-RTGIISSPNYLARSYGVKAAMPIF 65
Query: 571 EAKEKCPN-IQLPS 609
AKE CPN I LPS
Sbjct: 66 LAKELCPNLIILPS 79
>UniRef50_Q83EN5 Cluster: DNA-damage-inducible protein P; n=4;
Bacteria|Rep: DNA-damage-inducible protein P - Coxiella
burnetii
Length = 357
Score = 56.0 bits (129), Expect = 8e-07
Identities = 29/81 (35%), Positives = 45/81 (55%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGD 570
R ++ +DMDCFY +E + NP+L+ KP+A V G I NY+AR GV +
Sbjct: 10 RKIIHVDMDCFYVAIEMRDNPKLREKPVA-VGGAAHSRGVICTANYIARGYGVQSAISSS 68
Query: 571 EAKEKCPNIQLPSVPCHRGKA 633
AK+ CP++ + V + +A
Sbjct: 69 YAKKLCPSLIILPVNMEKYRA 89
>UniRef50_Q38C71 Cluster: DNA polymerase eta, putative; n=3;
Trypanosoma|Rep: DNA polymerase eta, putative -
Trypanosoma brucei
Length = 525
Score = 56.0 bits (129), Expect = 8e-07
Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEE-KLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRG 567
R + IDMDCFY QVE +L + + +P + Q+ G +IAVNY AR G+ R
Sbjct: 2 RCIAHIDMDCFYAQVEAVRLGVDCRTEPYVLSQW-----GNLIAVNYPARKFGIGRFDTV 56
Query: 568 DEAKEKCPNIQLPSV 612
+A EKCP++++ V
Sbjct: 57 TDALEKCPHVKISHV 71
>UniRef50_P54560 Cluster: DNA polymerase IV 2; n=4; Bacillus|Rep:
DNA polymerase IV 2 - Bacillus subtilis
Length = 412
Score = 56.0 bits (129), Expect = 8e-07
Identities = 29/68 (42%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGII-AVNYVARDLGVTRHMRG 567
+V+ L+DM FY VE+ NP LK +P+ +V +P K GG++ A +A+ GV R
Sbjct: 5 KVIFLVDMQSFYASVEKAENPHLKNRPV-IVSGDPEKRGGVVLAACPLAKQKGVVNASRL 63
Query: 568 DEAKEKCP 591
EA+EKCP
Sbjct: 64 WEAQEKCP 71
>UniRef50_Q4QCF2 Cluster: DNA polymerase eta, putative; n=3;
Leishmania|Rep: DNA polymerase eta, putative -
Leishmania major
Length = 760
Score = 55.6 bits (128), Expect = 1e-06
Identities = 32/87 (36%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEE-KLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRG 567
R + +DMDCFY QVE +L + + P+ + Q+ G +IAVNY AR GV R
Sbjct: 15 RCIAHMDMDCFYAQVEAVRLGVDCRVTPLVLSQW-----GSLIAVNYPARARGVRRFSNV 69
Query: 568 DEAKEKCPNIQLPSVPCHRGKADISKY 648
EA+ CP + + P +R +S+Y
Sbjct: 70 SEAQALCPGLIVALSPSYRMGEAVSQY 96
>UniRef50_A2YGF9 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 1176
Score = 55.2 bits (127), Expect = 1e-06
Identities = 28/70 (40%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Frame = +1
Query: 397 VVLIDMDCFYCQVEEKLNPELKGKPIAVVQY-NPWKGGGIIAVNYVARDLGVTRHMRGDE 573
++ IDMDCF+ V + PEL KP+AV NP I + NY AR+ G+ M E
Sbjct: 346 IIHIDMDCFFVSVVIRNKPELHDKPVAVCHSDNPKGTAEISSANYPARNYGIKAGMFVRE 405
Query: 574 AKEKCPNIQL 603
AK +CP++ +
Sbjct: 406 AKARCPHLMI 415
>UniRef50_P96022 Cluster: DNA polymerase IV; n=9; Sulfolobaceae|Rep:
DNA polymerase IV - Sulfolobus solfataricus
Length = 354
Score = 55.2 bits (127), Expect = 1e-06
Identities = 28/69 (40%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Frame = +1
Query: 394 VVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYN--PWKGGGIIAVNYVARDLGVTRHMRG 567
+V+ +D D F+ QVEE LNP+ KGKP+ V Y+ G + NY AR LGV M
Sbjct: 2 IVIFVDFDYFFAQVEEVLNPQYKGKPLVVCVYSGRTKTSGAVATANYEARKLGVKAGMPI 61
Query: 568 DEAKEKCPN 594
+A + P+
Sbjct: 62 IKAMQIAPS 70
>UniRef50_UPI000023CC7C Cluster: hypothetical protein FG06286.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG06286.1 - Gibberella zeae PH-1
Length = 616
Score = 54.8 bits (126), Expect = 2e-06
Identities = 35/85 (41%), Positives = 44/85 (51%)
Frame = +1
Query: 409 DMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGDEAKEKC 588
D DCFY QV E PELK P+ V Q N + NY AR G+T+ M EAK KC
Sbjct: 71 DYDCFYAQVFENKKPELKNFPVGVKQKN-----CLATCNYNARARGLTKLMSVSEAKRKC 125
Query: 589 PNIQLPSVPCHRGKADISKYRDAGK 663
P + L G+ D++ +RD K
Sbjct: 126 PELVLVD-----GE-DLTPFRDMSK 144
>UniRef50_Q7R5M9 Cluster: GLP_487_58318_60345; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_487_58318_60345 - Giardia lamblia
ATCC 50803
Length = 675
Score = 54.8 bits (126), Expect = 2e-06
Identities = 27/69 (39%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Frame = +1
Query: 394 VVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAV-NYVARDLGVTRHMRGD 570
V+ ++D DCFY +EE+ NP L+GKP+ + GG I+ NY AR GV M
Sbjct: 89 VIAVLDFDCFYASIEERDNPSLRGKPVIIT------GGSIVCTSNYAARKYGVRSAMPTH 142
Query: 571 EAKEKCPNI 597
AK C ++
Sbjct: 143 VAKALCKDV 151
>UniRef50_Q9VHV1 Cluster: CG7602-PA, isoform A; n=2; Sophophora|Rep:
CG7602-PA, isoform A - Drosophila melanogaster (Fruit
fly)
Length = 737
Score = 54.4 bits (125), Expect = 2e-06
Identities = 29/71 (40%), Positives = 42/71 (59%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGD 570
R ++ +DMD FY QVEE +P L+ K + + Q N ++ NYVAR GVT+ M
Sbjct: 15 RTIIHLDMDYFYAQVEEIRDPTLRSKALGIQQKNI-----VVTCNYVARAKGVTKLMLIA 69
Query: 571 EAKEKCPNIQL 603
EA+ CP++ L
Sbjct: 70 EAQRICPDLVL 80
>UniRef50_UPI00015B5F58 Cluster: PREDICTED: similar to CG7602-PA;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
CG7602-PA - Nasonia vitripennis
Length = 1055
Score = 54.0 bits (124), Expect = 3e-06
Identities = 30/71 (42%), Positives = 41/71 (57%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGD 570
R +V ID+D FY QVE +PE +GKP+ V Q N ++ NY AR GV + M +
Sbjct: 10 RSIVHIDVDYFYAQVEMMRHPEFQGKPLGVQQKNI-----VVTCNYEARAFGVKKCMLIE 64
Query: 571 EAKEKCPNIQL 603
EA CP++ L
Sbjct: 65 EALRLCPSLIL 75
>UniRef50_UPI000023E7DE Cluster: hypothetical protein FG01035.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG01035.1 - Gibberella zeae PH-1
Length = 1143
Score = 54.0 bits (124), Expect = 3e-06
Identities = 29/71 (40%), Positives = 40/71 (56%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGD 570
R V+ +D D F+C V K PEL KP AVV ++ G I + NY AR+ GV M
Sbjct: 359 RYVMHVDFDSFFCAVSIKKKPELINKP-AVVAHSIGSGSEIASCNYPAREFGVKNGMWMK 417
Query: 571 EAKEKCPNIQL 603
A E CP++++
Sbjct: 418 SALELCPDLKV 428
>UniRef50_Q2LU75 Cluster: DNA polymerase IV; n=1; Syntrophus
aciditrophicus SB|Rep: DNA polymerase IV - Syntrophus
aciditrophicus (strain SB)
Length = 362
Score = 54.0 bits (124), Expect = 3e-06
Identities = 31/74 (41%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAV-VQYNPWKGGGIIAVNYVARDLGVTRHMRG 567
R ++ IDMD F+ VEE PELKGKP+ + +P K G + NY AR G++ M
Sbjct: 14 RRILHIDMDAFFASVEENRKPELKGKPVVIGGMGDPSKRGVVSTANYEARKYGISSAMPL 73
Query: 568 DEAKEKCPN-IQLP 606
A + CP I LP
Sbjct: 74 RTAYKLCPRAIFLP 87
>UniRef50_A1HLX7 Cluster: DNA-directed DNA polymerase; n=1;
Thermosinus carboxydivorans Nor1|Rep: DNA-directed DNA
polymerase - Thermosinus carboxydivorans Nor1
Length = 382
Score = 54.0 bits (124), Expect = 3e-06
Identities = 26/69 (37%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIA-VNYVARDLGVTRHMRG 567
R ++ +DMD FY VE++ NPE +G+P+ + G G++A +Y AR GV M
Sbjct: 3 RWIIHVDMDAFYAAVEQRDNPEFRGRPVIIGGVG---GRGVVATASYEARQFGVRSAMSM 59
Query: 568 DEAKEKCPN 594
EA+ +CP+
Sbjct: 60 AEARRRCPH 68
>UniRef50_Q0U034 Cluster: Putative uncharacterized protein; n=4;
Pezizomycotina|Rep: Putative uncharacterized protein -
Phaeosphaeria nodorum (Septoria nodorum)
Length = 720
Score = 54.0 bits (124), Expect = 3e-06
Identities = 32/77 (41%), Positives = 47/77 (61%), Gaps = 3/77 (3%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEK---LNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHM 561
RV+ +D+D FY Q E L+P L P+AV Q W+G +IA+NY AR G++RH+
Sbjct: 44 RVIAHVDLDAFYAQCETVRLGLDPSL---PLAVQQ---WQG--LIAINYPARAFGLSRHV 95
Query: 562 RGDEAKEKCPNIQLPSV 612
EA ++CP++ L V
Sbjct: 96 TSSEALKQCPDLILQHV 112
>UniRef50_Q2L7B2 Cluster: REV1; n=5; Neurospora|Rep: REV1 -
Neurospora crassa
Length = 1343
Score = 53.6 bits (123), Expect = 4e-06
Identities = 28/71 (39%), Positives = 39/71 (54%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGD 570
R ++ +D D F+C V K PE + KP AVV + KG I + NY AR GV M
Sbjct: 366 RYIMHVDFDSFFCAVSLKKAPEYRDKP-AVVAHGNGKGSEIASCNYPARKFGVKNGMWMK 424
Query: 571 EAKEKCPNIQL 603
A E CP++++
Sbjct: 425 HALELCPDLKI 435
>UniRef50_Q97SC7 Cluster: DNA polymerase IV; n=37; Bacilli|Rep: DNA
polymerase IV - Streptococcus pneumoniae
Length = 353
Score = 53.6 bits (123), Expect = 4e-06
Identities = 28/70 (40%), Positives = 42/70 (60%), Gaps = 3/70 (4%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGG---IIAVNYVARDLGVTRHM 561
R ++ IDMD F+ VE + NP+L+GKP+ ++ +P + GG + +Y AR GV M
Sbjct: 12 RKIIHIDMDAFFAAVEIRDNPKLRGKPV-IIGSDPRQTGGRGVVSTCSYEARAFGVHSAM 70
Query: 562 RGDEAKEKCP 591
EA E+CP
Sbjct: 71 SSKEAYERCP 80
>UniRef50_Q62IX2 Cluster: DNA polymerase IV; n=32; Bacteria|Rep: DNA
polymerase IV - Burkholderia mallei (Pseudomonas mallei)
Length = 400
Score = 53.2 bits (122), Expect = 5e-06
Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 4/92 (4%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGD 570
R ++ D DCFY VE + +P L+G+P+A V P + G I NY AR GV M
Sbjct: 19 RKIIHCDCDCFYASVEMRDDPSLRGRPLA-VGGRPDQRGVIATCNYDARRYGVHSAMSSA 77
Query: 571 EAKEKCPNIQL--PSVPCHRGKADI--SKYRD 654
A KCP++ + P++ +R + + + YRD
Sbjct: 78 LAMRKCPDLLILPPAMDKYRAASRLIMAIYRD 109
>UniRef50_Q8DBI7 Cluster: DNA polymerase IV; n=68;
Gammaproteobacteria|Rep: DNA polymerase IV - Vibrio
vulnificus
Length = 354
Score = 53.2 bits (122), Expect = 5e-06
Identities = 27/69 (39%), Positives = 39/69 (56%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGD 570
R ++ IDMDCFY VE + NP + +P+AV + + G I NY AR GV M
Sbjct: 6 RKIIHIDMDCFYAAVEMRDNPNFRSRPLAVGGHEKQR-GVISTCNYEARKFGVRSAMPTA 64
Query: 571 EAKEKCPNI 597
+A + CP++
Sbjct: 65 QALKLCPSL 73
>UniRef50_A6DIV6 Cluster: DNA polymerase IV; n=1; Lentisphaera
araneosa HTCC2155|Rep: DNA polymerase IV - Lentisphaera
araneosa HTCC2155
Length = 354
Score = 52.8 bits (121), Expect = 7e-06
Identities = 28/69 (40%), Positives = 39/69 (56%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGD 570
R ++ +DMDCF+ VE + PELKGK +AV + G I A NY AR+ GV +
Sbjct: 6 RKIIHVDMDCFFAAVEVRDQPELKGKAVAVGGAAK-RRGVIAAANYEARNFGVHSALSTA 64
Query: 571 EAKEKCPNI 597
A +CP +
Sbjct: 65 IALRRCPEL 73
>UniRef50_A5N2U5 Cluster: DinB; n=3; Clostridium|Rep: DinB -
Clostridium kluyveri DSM 555
Length = 400
Score = 52.4 bits (120), Expect = 9e-06
Identities = 27/69 (39%), Positives = 37/69 (53%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGD 570
RV+ L+DM+ F+ E +PE+ GKP AV + G I+ NY AR GV M
Sbjct: 3 RVIFLVDMNAFFISCESTRHPEIIGKPAAVAGDPKNRSGIILTANYEARKFGVKTTMVLH 62
Query: 571 EAKEKCPNI 597
+ + CPNI
Sbjct: 63 KVLKLCPNI 71
>UniRef50_A5EBX2 Cluster: DNA polymerase IV; n=2;
Bradyrhizobiaceae|Rep: DNA polymerase IV -
Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182)
Length = 330
Score = 52.4 bits (120), Expect = 9e-06
Identities = 29/69 (42%), Positives = 39/69 (56%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGD 570
R ++ IDMD FY VE++ NP L+GKP+AV + G + A +Y AR GV MR
Sbjct: 26 RKIIHIDMDAFYASVEQRDNPGLRGKPVAV--GGSKERGVVAAASYEARAFGVRSAMRSV 83
Query: 571 EAKEKCPNI 597
AK +I
Sbjct: 84 TAKRNMQDI 92
>UniRef50_A4RZL9 Cluster: Predicted protein; n=1; Ostreococcus
lucimarinus CCE9901|Rep: Predicted protein -
Ostreococcus lucimarinus CCE9901
Length = 429
Score = 52.4 bits (120), Expect = 9e-06
Identities = 26/63 (41%), Positives = 39/63 (61%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGD 570
R V +D D F+ VE++ NP L+ P+AV Q+ G II V++ AR+LG T+HM D
Sbjct: 28 RCVAHVDADAFFAAVEKQRNPRLRDVPVAVRQH-----GDIICVDHRARELGATKHMNPD 82
Query: 571 EAK 579
+ +
Sbjct: 83 KCR 85
>UniRef50_Q7USY7 Cluster: DNA polymerase IV; n=1; Pirellula sp.|Rep:
DNA polymerase IV - Rhodopirellula baltica
Length = 396
Score = 52.4 bits (120), Expect = 9e-06
Identities = 25/68 (36%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Frame = +1
Query: 394 VVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGII-AVNYVARDLGVTRHMRGD 570
+++ +DMD FY VE++ PEL+G+P+ V +G G++ A +Y AR+ G+ M G
Sbjct: 1 MILHVDMDAFYASVEQRDRPELRGRPVVV---GGSEGRGVVTAASYEAREYGIHSAMPGS 57
Query: 571 EAKEKCPN 594
A + CP+
Sbjct: 58 RAIKLCPH 65
>UniRef50_Q7NAR2 Cluster: UmuC/DinP-like; n=1; Mycoplasma
gallisepticum|Rep: UmuC/DinP-like - Mycoplasma
gallisepticum
Length = 405
Score = 52.0 bits (119), Expect = 1e-05
Identities = 26/74 (35%), Positives = 39/74 (52%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGD 570
+ + ID D F+ VEE NPE KP+ V + G + + NY+AR GV M
Sbjct: 11 KTIFHIDFDAFFASVEENFNPEYNNKPLVVGSKS--NGSIVSSANYIARKFGVRSAMPIF 68
Query: 571 EAKEKCPNIQLPSV 612
+AK+ CP++ + V
Sbjct: 69 QAKKLCPSLIIAEV 82
>UniRef50_A2TVA1 Cluster: DNA polymerase IV; n=10; cellular
organisms|Rep: DNA polymerase IV - Dokdonia donghaensis
MED134
Length = 370
Score = 52.0 bits (119), Expect = 1e-05
Identities = 27/67 (40%), Positives = 40/67 (59%)
Frame = +1
Query: 397 VVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGDEA 576
++ +DMD FY VE+ NP+L+GK IAV + G + A +Y AR GV M G A
Sbjct: 9 IIHVDMDAFYASVEQLDNPDLRGKAIAV--GGGGERGVVSAASYEARKYGVRSAMAGALA 66
Query: 577 KEKCPNI 597
++ CP++
Sbjct: 67 RKLCPDL 73
>UniRef50_Q015N2 Cluster: DNA-directed polymerase kappa; AtPOLK;
n=2; Ostreococcus|Rep: DNA-directed polymerase kappa;
AtPOLK - Ostreococcus tauri
Length = 605
Score = 52.0 bits (119), Expect = 1e-05
Identities = 36/88 (40%), Positives = 43/88 (48%)
Frame = +1
Query: 400 VLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGDEAK 579
V++DMD FY EE NPELK P+AV P + NYVAR GV M G AK
Sbjct: 166 VVVDMDGFYAACEELANPELKKVPVAVAA-GP--SCVLTTANYVARKFGVRAAMPGFIAK 222
Query: 580 EKCPNIQLPSVPCHRGKADISKYRDAGK 663
+ CP + K D +KY A K
Sbjct: 223 KLCPELVFV-------KPDFTKYVKASK 243
>UniRef50_Q0UFK5 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 1197
Score = 52.0 bits (119), Expect = 1e-05
Identities = 27/71 (38%), Positives = 40/71 (56%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGD 570
R ++ +D D F+ V K +P+ K KP AVV + G I + NY AR GV M
Sbjct: 396 RYILHVDFDSFFAAVSLKKHPQYKDKP-AVVAHGQGSGSEIASCNYPARKFGVKNGMWMK 454
Query: 571 EAKEKCPNIQL 603
+A+E CP+I++
Sbjct: 455 KAQELCPDIKI 465
>UniRef50_Q9UBT6-3 Cluster: Isoform 3 of Q9UBT6 ; n=4;
Catarrhini|Rep: Isoform 3 of Q9UBT6 - Homo sapiens
(Human)
Length = 672
Score = 51.6 bits (118), Expect = 2e-05
Identities = 39/89 (43%), Positives = 44/89 (49%)
Frame = +1
Query: 397 VVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGDEA 576
+V IDMD FY VE + NPELK KPIAV + + NY AR GV M G A
Sbjct: 103 IVHIDMDAFYAAVEMRDNPELKDKPIAVGSMSM-----LSTSNYHARRFGVRAAMPGFIA 157
Query: 577 KEKCPNIQLPSVPCHRGKADISKYRDAGK 663
K CP QL VP + KYR K
Sbjct: 158 KRLCP--QLIIVP-----PNFDKYRAVSK 179
>UniRef50_Q5Q9H7 Cluster: Polymerase kappa isoform 2; n=14;
Murinae|Rep: Polymerase kappa isoform 2 - Mus musculus
(Mouse)
Length = 793
Score = 51.6 bits (118), Expect = 2e-05
Identities = 38/89 (42%), Positives = 44/89 (49%)
Frame = +1
Query: 397 VVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGDEA 576
+V +DMD FY VE + NPELK KPIAV + + NY AR GV M G A
Sbjct: 102 IVHVDMDAFYAAVEMRDNPELKDKPIAVGSMSM-----LATSNYHARRFGVRAAMPGFIA 156
Query: 577 KEKCPNIQLPSVPCHRGKADISKYRDAGK 663
K CP QL VP + KYR K
Sbjct: 157 KRLCP--QLIIVP-----PNFDKYRAVSK 178
>UniRef50_Q74H50 Cluster: ImpB/MucB/SamB family protein; n=11;
Bacteria|Rep: ImpB/MucB/SamB family protein - Geobacter
sulfurreducens
Length = 413
Score = 51.6 bits (118), Expect = 2e-05
Identities = 30/74 (40%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGG---IIAVNYVARDLGVTRHM 561
R ++ IDM+ F+ VE++ NP L+GKPIAVV G G + +Y AR GV M
Sbjct: 9 RTILHIDMNAFFASVEQQANPSLQGKPIAVV------GSGRTVVTTASYEARAFGVKTGM 62
Query: 562 RGDEAKEKCPNIQL 603
EA + CP++ L
Sbjct: 63 NKWEALQACPHLIL 76
>UniRef50_A0D236 Cluster: Chromosome undetermined scaffold_35, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_35,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 591
Score = 51.6 bits (118), Expect = 2e-05
Identities = 33/77 (42%), Positives = 38/77 (49%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGD 570
R+ DMD FY E PELK KP+AV Q + NYVAR GV M G
Sbjct: 86 RIWAHFDMDMFYVACELLDKPELKDKPVAVGQTI------VSTANYVARKFGVRSAMPGF 139
Query: 571 EAKEKCPNIQLPSVPCH 621
AK+ CP I +PCH
Sbjct: 140 VAKKLCPEIIF--IPCH 154
>UniRef50_Q4PIG2 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 865
Score = 51.6 bits (118), Expect = 2e-05
Identities = 34/75 (45%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVE-EKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRG 567
RVV D+D Y Q E +L + PIAV Q W+G +IAVNY ARD GV+R
Sbjct: 114 RVVAHCDVDAAYAQFEASRLGLDATVVPIAVQQ---WQG--LIAVNYPARDAGVSRFESI 168
Query: 568 DEAKEKCPNIQLPSV 612
EA +KCP++ L V
Sbjct: 169 PEALKKCPDLHLVHV 183
>UniRef50_Q9UBT6 Cluster: DNA polymerase kappa; n=39; Tetrapoda|Rep:
DNA polymerase kappa - Homo sapiens (Human)
Length = 870
Score = 51.6 bits (118), Expect = 2e-05
Identities = 39/89 (43%), Positives = 44/89 (49%)
Frame = +1
Query: 397 VVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGDEA 576
+V IDMD FY VE + NPELK KPIAV + + NY AR GV M G A
Sbjct: 103 IVHIDMDAFYAAVEMRDNPELKDKPIAVGSMSM-----LSTSNYHARRFGVRAAMPGFIA 157
Query: 577 KEKCPNIQLPSVPCHRGKADISKYRDAGK 663
K CP QL VP + KYR K
Sbjct: 158 KRLCP--QLIIVP-----PNFDKYRAVSK 179
>UniRef50_Q67QM6 Cluster: DinP-like DNA-damage-inducible protein;
n=1; Symbiobacterium thermophilum|Rep: DinP-like
DNA-damage-inducible protein - Symbiobacterium
thermophilum
Length = 361
Score = 51.2 bits (117), Expect = 2e-05
Identities = 25/65 (38%), Positives = 37/65 (56%)
Frame = +1
Query: 397 VVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGDEA 576
V+ +DMD F+ +E++ NP L+GKP+ +V +P G + +Y AR GV M EA
Sbjct: 7 VIHLDMDAFFASIEQRDNPRLRGKPV-IVGGSPNSRGVVSTCSYEARRFGVRSAMPSREA 65
Query: 577 KEKCP 591
CP
Sbjct: 66 LRLCP 70
>UniRef50_Q5QZ82 Cluster: DinP; n=2; Idiomarina|Rep: DinP -
Idiomarina loihiensis
Length = 356
Score = 51.2 bits (117), Expect = 2e-05
Identities = 25/69 (36%), Positives = 36/69 (52%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGD 570
R + L+D+D F+ EE +P LK +P AV + G + NY+AR GV M G
Sbjct: 6 RKIALLDLDAFFASAEELRDPSLKTRPFAV--GGGGERGVVATANYLARQFGVKSAMPGS 63
Query: 571 EAKEKCPNI 597
A+ CP +
Sbjct: 64 HARRLCPQL 72
>UniRef50_A6QNV6 Cluster: MGC152198 protein; n=3; Eutheria|Rep:
MGC152198 protein - Bos taurus (Bovine)
Length = 877
Score = 51.2 bits (117), Expect = 2e-05
Identities = 31/67 (46%), Positives = 36/67 (53%)
Frame = +1
Query: 397 VVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGDEA 576
+V IDMD FY VE + NPELK KPIAV + + NY AR GV M G A
Sbjct: 110 IVHIDMDAFYAAVEMRDNPELKDKPIAVGSMSM-----LSTSNYHARRFGVRAAMPGFIA 164
Query: 577 KEKCPNI 597
K CP +
Sbjct: 165 KRLCPQL 171
>UniRef50_A7F1S2 Cluster: Putative uncharacterized protein; n=1;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 465
Score = 51.2 bits (117), Expect = 2e-05
Identities = 30/78 (38%), Positives = 40/78 (51%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGD 570
RV+ L+D D FY Q E +P+AV Q+N IIA+NY AR G +R +
Sbjct: 36 RVIALVDYDAFYAQCEMVRLKLDASQPLAVQQWN-----AIIALNYAARGFGFSRGASVE 90
Query: 571 EAKEKCPNIQLPSVPCHR 624
E + CPNI + V R
Sbjct: 91 EVRRLCPNIIMQHVATWR 108
>UniRef50_A2QTI4 Cluster: Contig An09c0050, complete genome; n=6;
Eurotiomycetidae|Rep: Contig An09c0050, complete genome
- Aspergillus niger
Length = 1165
Score = 51.2 bits (117), Expect = 2e-05
Identities = 25/71 (35%), Positives = 38/71 (53%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGD 570
R ++ +D DCF+ V PEL+GKP+AV + G I + NY AR G+ M
Sbjct: 372 RYIMHVDFDCFFAAVSTLKRPELQGKPVAVA-HGTGSGSEIASCNYEARAHGIKNGMWMK 430
Query: 571 EAKEKCPNIQL 603
A + CP +++
Sbjct: 431 GALQTCPELKV 441
>UniRef50_Q4L7K8 Cluster: DNA polymerase IV; n=16;
Staphylococcus|Rep: DNA polymerase IV - Staphylococcus
haemolyticus (strain JCSC1435)
Length = 358
Score = 51.2 bits (117), Expect = 2e-05
Identities = 28/68 (41%), Positives = 38/68 (55%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGD 570
R ++ IDMD F+ QVE + NP LKGKP+ +V G + +Y AR GV M
Sbjct: 4 RRIIHIDMDYFFAQVEMRDNPTLKGKPV-IVGGKASTRGVVSTASYEARKYGVHSAMPMS 62
Query: 571 EAKEKCPN 594
+A + CPN
Sbjct: 63 QAHKLCPN 70
>UniRef50_Q8XK37 Cluster: DNA polymerase IV; n=29; Bacteria|Rep: DNA
polymerase IV - Clostridium perfringens
Length = 359
Score = 51.2 bits (117), Expect = 2e-05
Identities = 25/67 (37%), Positives = 39/67 (58%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGD 570
R ++ IDMD FY +E++ NP+ KGKP+ +V +P + G + +Y AR G+ M
Sbjct: 5 RKIIHIDMDAFYASIEQRDNPKYKGKPL-IVGGDPNRRGVVATCSYEARKYGIHSAMPSL 63
Query: 571 EAKEKCP 591
A + CP
Sbjct: 64 TAYKLCP 70
>UniRef50_Q03VU4 Cluster: Nucleotidyltransferase/DNA polymerase for
DNA repair; n=1; Leuconostoc mesenteroides subsp.
mesenteroides ATCC 8293|Rep: Nucleotidyltransferase/DNA
polymerase for DNA repair - Leuconostoc mesenteroides
subsp. mesenteroides (strain ATCC 8293 /NCDO 523)
Length = 361
Score = 50.8 bits (116), Expect = 3e-05
Identities = 27/71 (38%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWK--GGGIIA-VNYVARDLGVTRHM 561
R ++ +D+D FY Q+E + +PEL+ P+ ++ +P + G G++A NY AR LGV M
Sbjct: 11 RRIIHVDLDAFYAQIEMRDHPELRDLPL-IISRDPIESNGRGVVATANYAARKLGVHSAM 69
Query: 562 RGDEAKEKCPN 594
EAK P+
Sbjct: 70 SAAEAKRLAPD 80
>UniRef50_Q4QCF3 Cluster: DNA polymerase eta, putative; n=3;
Leishmania|Rep: DNA polymerase eta, putative -
Leishmania major
Length = 786
Score = 50.8 bits (116), Expect = 3e-05
Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 2/76 (2%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEE-KLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRH-MR 564
R + +DMDCFY QVE +L + + P A+VQ+ G IAVNY AR GV R +
Sbjct: 34 RCIAHMDMDCFYAQVEAVRLGVDCRVTPFALVQW-----GSFIAVNYPARARGVRRFCLS 88
Query: 565 GDEAKEKCPNIQLPSV 612
DE + + P++++ +
Sbjct: 89 PDEVRRELPDVRMSHI 104
>UniRef50_A4RF27 Cluster: Putative uncharacterized protein; n=1;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 1201
Score = 50.8 bits (116), Expect = 3e-05
Identities = 28/71 (39%), Positives = 37/71 (52%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGD 570
R ++ +D D F+C V K PE KP AVV + G I + NY AR+ GV M
Sbjct: 384 RYIMHVDFDSFFCAVSLKTAPEYIDKP-AVVAHGNGTGSEIASCNYPAREFGVKNGMWMK 442
Query: 571 EAKEKCPNIQL 603
A E CP I++
Sbjct: 443 RALELCPTIKV 453
>UniRef50_Q8TIW3 Cluster: DNA polymerase IV; n=4;
Methanosarcinaceae|Rep: DNA polymerase IV -
Methanosarcina acetivorans
Length = 366
Score = 50.8 bits (116), Expect = 3e-05
Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWK--GGGIIAVNYVARDLGVTRHMR 564
RV++ +DMD FY +EE+ PEL GK + V + G + NY+AR+ G+ M
Sbjct: 4 RVIIHVDMDYFYAAIEEREKPELLGKAVVVCMLSGRSELSGSVSTCNYIAREFGIRSGMP 63
Query: 565 GDEAKEKCP 591
AK+ P
Sbjct: 64 CSRAKKLNP 72
>UniRef50_Q9HQT4 Cluster: DNA polymerase IV; n=5;
Halobacteriaceae|Rep: DNA polymerase IV - Halobacterium
salinarium (Halobacterium halobium)
Length = 411
Score = 50.8 bits (116), Expect = 3e-05
Identities = 27/69 (39%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAV-VQYNPWKGGGIIA-VNYVARDLGVTRHMR 564
R+VV +DMDCFY E + P L+G P+ V + Y P + G +A +Y AR+ GV
Sbjct: 16 RIVVHVDMDCFYASCERRREPALRGAPVVVGMGYEPDQTVGAVATASYEAREYGVESAQA 75
Query: 565 GDEAKEKCP 591
A E+ P
Sbjct: 76 ISAALERLP 84
>UniRef50_Q4RUQ7 Cluster: Chromosome 12 SCAF14993, whole genome
shotgun sequence; n=10; Eumetazoa|Rep: Chromosome 12
SCAF14993, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 520
Score = 50.4 bits (115), Expect = 4e-05
Identities = 29/69 (42%), Positives = 39/69 (56%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGD 570
R +V +DMD FY VE + PELK KP+AV + + NY+AR GV M G
Sbjct: 93 RAIVHVDMDAFYAAVEMRDCPELKDKPMAVGSMSM-----LSTSNYLARKYGVRAAMPGF 147
Query: 571 EAKEKCPNI 597
AK+ CP++
Sbjct: 148 IAKKLCPHL 156
>UniRef50_Q0HUM1 Cluster: DNA-directed DNA polymerase; n=25;
Proteobacteria|Rep: DNA-directed DNA polymerase -
Shewanella sp. (strain MR-7)
Length = 418
Score = 50.4 bits (115), Expect = 4e-05
Identities = 25/65 (38%), Positives = 36/65 (55%)
Frame = +1
Query: 403 LIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGDEAKE 582
L+D + FYC E+ P+ +GKPI V+ N G I+A N AR+LGV + KE
Sbjct: 4 LVDANSFYCSAEQVFRPDWRGKPIIVLSNN---DGCIVAANRQARELGVPKFAPYFHVKE 60
Query: 583 KCPNI 597
+C +
Sbjct: 61 QCAKL 65
>UniRef50_A7HFE4 Cluster: DNA-directed DNA polymerase; n=1;
Anaeromyxobacter sp. Fw109-5|Rep: DNA-directed DNA
polymerase - Anaeromyxobacter sp. Fw109-5
Length = 459
Score = 50.4 bits (115), Expect = 4e-05
Identities = 29/72 (40%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Frame = +1
Query: 397 VVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGDEA 576
+ +D+D F+ VE L+P L+GKP+ VV P G + A +Y R LGV M EA
Sbjct: 18 ICCLDLDTFFVSVERLLDPTLEGKPV-VVGGKPGSRGVVTAASYEVRRLGVKSGMSLFEA 76
Query: 577 KEKCPN-IQLPS 609
++ PN I LP+
Sbjct: 77 GKRAPNAIYLPT 88
>UniRef50_Q010L0 Cluster: Translesion DNA polymerase-REV1
deoxycytidyl transferase; n=2; Ostreococcus|Rep:
Translesion DNA polymerase-REV1 deoxycytidyl transferase
- Ostreococcus tauri
Length = 878
Score = 50.4 bits (115), Expect = 4e-05
Identities = 27/69 (39%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Frame = +1
Query: 394 VVVLIDMDCFYCQVEEKLNPELKGKPIAVV-QYNPWKGGGIIAVNYVARDLGVTRHMRGD 570
V++ +DMDCF+ V + + EL+ KP+AV + G I + NY AR GV M D
Sbjct: 53 VIMHVDMDCFFASVATRNDEELRSKPVAVTWGTTKSQRGEISSCNYRARAFGVRAGMWLD 112
Query: 571 EAKEKCPNI 597
EA CP +
Sbjct: 113 EALRACPTL 121
>UniRef50_Q5CPV1 Cluster: DinB/family X-type DNA polymerase; n=1;
Cryptosporidium parvum Iowa II|Rep: DinB/family X-type
DNA polymerase - Cryptosporidium parvum Iowa II
Length = 358
Score = 50.4 bits (115), Expect = 4e-05
Identities = 28/72 (38%), Positives = 40/72 (55%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGD 570
R++ LIDMD F+ QV + KP+AV+ N ++AVNY +R+ GV R M +
Sbjct: 35 RIISLIDMDAFFAQVCHVEYNIPRDKPLAVINNNV-----VLAVNYPSREKGVNRKMSKE 89
Query: 571 EAKEKCPNIQLP 606
E CP I +P
Sbjct: 90 EILSICPEIIIP 101
>UniRef50_Q4Q8C4 Cluster: DNA polymerase kappa, putative; n=3;
Leishmania|Rep: DNA polymerase kappa, putative -
Leishmania major
Length = 598
Score = 50.4 bits (115), Expect = 4e-05
Identities = 28/69 (40%), Positives = 34/69 (49%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGD 570
R + IDMD FY VEEK P L+GKP V + NY+AR GV M G
Sbjct: 143 RRYIHIDMDMFYAAVEEKKTPSLRGKPFGVGSQQM-----LSTTNYIARQYGVRSGMPGF 197
Query: 571 EAKEKCPNI 597
K+ CP +
Sbjct: 198 IGKKLCPEL 206
>UniRef50_Q2UN38 Cluster: Translesion DNA polymerase - REV1
deoxycytidyl transferase; n=2; Trichocomaceae|Rep:
Translesion DNA polymerase - REV1 deoxycytidyl
transferase - Aspergillus oryzae
Length = 1087
Score = 50.4 bits (115), Expect = 4e-05
Identities = 25/71 (35%), Positives = 38/71 (53%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGD 570
R ++ +D DCF+ V NP +GKP+AV + G I + NY AR GV M
Sbjct: 363 RYIMHVDFDCFFAAVSTLRNPGYEGKPVAVA-HGTGSGSEIASCNYAARAHGVKNGMWMK 421
Query: 571 EAKEKCPNIQL 603
A + CP++++
Sbjct: 422 GALQACPDLKV 432
>UniRef50_Q8XZ19 Cluster: DNA polymerase IV; n=46; Bacteria|Rep: DNA
polymerase IV - Ralstonia solanacearum (Pseudomonas
solanacearum)
Length = 357
Score = 50.4 bits (115), Expect = 4e-05
Identities = 24/69 (34%), Positives = 39/69 (56%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGD 570
R ++ D DCFY +E + +P L G+P+A V P + G + NY AR G+ M
Sbjct: 2 RKIIHCDCDCFYAAIEMRDDPRLVGRPLA-VGGRPERRGVVATCNYEARKFGIHSAMPMA 60
Query: 571 EAKEKCPNI 597
+A ++CP++
Sbjct: 61 QAVKRCPDL 69
>UniRef50_A4VCZ3 Cluster: DNA polymerase IV / kappa; n=1;
Tetrahymena thermophila SB210|Rep: DNA polymerase IV /
kappa - Tetrahymena thermophila SB210
Length = 950
Score = 50.0 bits (114), Expect = 5e-05
Identities = 37/89 (41%), Positives = 44/89 (49%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGD 570
R+ V DMD FY E K P+LK P+AV + I NYVAR GV M G
Sbjct: 104 RIWVHFDMDMFYVACELKDRPQLKDLPVAVGGMSM-----ISTANYVARKFGVRSAMPGF 158
Query: 571 EAKEKCPNIQLPSVPCHRGKADISKYRDA 657
AK+ CP QL +PC + KYR A
Sbjct: 159 IAKKLCP--QLILIPC-----NFEKYRKA 180
>UniRef50_Q39ZU3 Cluster: Damage-inducible protein DinP; n=1;
Pelobacter carbinolicus DSM 2380|Rep: Damage-inducible
protein DinP - Pelobacter carbinolicus (strain DSM 2380
/ Gra Bd 1)
Length = 399
Score = 49.6 bits (113), Expect = 7e-05
Identities = 25/67 (37%), Positives = 37/67 (55%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGD 570
R+++ +DMD FY VE+ +PELKG+P+ V + G + A +Y AR G+ M
Sbjct: 9 RIILHLDMDAFYASVEQLDSPELKGQPVVVGGHR--SRGVVCACSYEARTFGIHSAMPMS 66
Query: 571 EAKEKCP 591
A CP
Sbjct: 67 RALRLCP 73
>UniRef50_Q6TFZ1 Cluster: MucB; n=7; root|Rep: MucB - Erwinia
amylovora (Fire blight bacteria)
Length = 434
Score = 49.6 bits (113), Expect = 7e-05
Identities = 23/54 (42%), Positives = 33/54 (61%)
Frame = +1
Query: 394 VVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTR 555
V LID++ YC EE P+L+G+P+ V+ N G ++AVN A+ LGV R
Sbjct: 14 VYALIDVNSMYCSCEEAFRPDLRGRPVVVLSNN---DGALVAVNRAAKALGVRR 64
>UniRef50_Q6KZW2 Cluster: DNA polymerase IV; n=3; Archaea|Rep: DNA
polymerase IV - Picrophilus torridus
Length = 344
Score = 49.6 bits (113), Expect = 7e-05
Identities = 25/58 (43%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Frame = +1
Query: 394 VVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYN--PWKGGGIIAVNYVARDLGVTRHM 561
+++LID D F+ QVEE +P LKGKP+ V Y+ + G + NY AR LG+ M
Sbjct: 1 MIMLIDFDYFFAQVEEINDPSLKGKPVVVSVYSGRNERSGAVATSNYEARALGIKSGM 58
>UniRef50_A0LG84 Cluster: DNA-directed DNA polymerase; n=4;
Deltaproteobacteria|Rep: DNA-directed DNA polymerase -
Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB)
Length = 425
Score = 49.2 bits (112), Expect = 9e-05
Identities = 30/73 (41%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGD 570
R ++ +DMD FY VE+ PE KGKP+ V + G + A +Y AR GV M
Sbjct: 35 RRIMHVDMDAFYASVEQADRPEFKGKPVIV---GGARRGVVSAASYEARRFGVHSAMPVF 91
Query: 571 EAKEKCP-NIQLP 606
+AK CP I LP
Sbjct: 92 QAKRLCPGGIFLP 104
>UniRef50_Q6FFG4 Cluster: DNA polymerase IV, devoid of proofreading,
damage-inducible protein P; n=2; Acinetobacter|Rep: DNA
polymerase IV, devoid of proofreading, damage-inducible
protein P - Acinetobacter sp. (strain ADP1)
Length = 351
Score = 48.8 bits (111), Expect = 1e-04
Identities = 25/69 (36%), Positives = 39/69 (56%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGD 570
R ++ IDMD FY VE + PELK P+ + ++P I A +Y AR G+ M
Sbjct: 2 RKIIHIDMDAFYASVELRERPELKTLPVVISSHHP--RAVIAAASYPARVYGLRSAMPMG 59
Query: 571 EAKEKCPNI 597
+A++ CP++
Sbjct: 60 QARKLCPDL 68
>UniRef50_A5FSS1 Cluster: DNA-directed DNA polymerase; n=3;
Dehalococcoides|Rep: DNA-directed DNA polymerase -
Dehalococcoides sp. BAV1
Length = 390
Score = 48.8 bits (111), Expect = 1e-04
Identities = 25/67 (37%), Positives = 37/67 (55%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGD 570
R V+ +D+D F+ VE+ + PE K KP+ +V P + G + A +Y AR G+ M
Sbjct: 4 RRVMHVDLDAFFVSVEQAVRPEFKDKPV-IVGGKPERRGVVAAASYEARKFGIHSGMPLI 62
Query: 571 EAKEKCP 591
AK CP
Sbjct: 63 TAKHLCP 69
>UniRef50_A1SQG1 Cluster: DNA-directed DNA polymerase; n=12;
Actinomycetales|Rep: DNA-directed DNA polymerase -
Nocardioides sp. (strain BAA-499 / JS614)
Length = 419
Score = 48.8 bits (111), Expect = 1e-04
Identities = 23/62 (37%), Positives = 37/62 (59%)
Frame = +1
Query: 409 DMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGDEAKEKC 588
D+D F+ VE++ +P L+G+P+ V GG ++A +Y A+ GV M G EA +C
Sbjct: 22 DLDSFFASVEQRDDPRLRGRPVIV------GGGVVLAASYEAKAFGVRSAMGGREAARRC 75
Query: 589 PN 594
P+
Sbjct: 76 PD 77
>UniRef50_Q5BYF2 Cluster: SJCHGC07422 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC07422 protein - Schistosoma
japonicum (Blood fluke)
Length = 179
Score = 48.8 bits (111), Expect = 1e-04
Identities = 29/76 (38%), Positives = 39/76 (51%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGD 570
R +V +DMD FY VE + PEL+ P+AV + NY+AR GV + G
Sbjct: 111 RSIVHVDMDAFYAAVEIRDQPELRHHPVAV-----GSNSMLSTSNYIARRFGVRAGLPGF 165
Query: 571 EAKEKCPNIQLPSVPC 618
K+ CP QL +PC
Sbjct: 166 LGKKLCP--QLKIIPC 179
>UniRef50_Q2FKS4 Cluster: DNA-directed DNA polymerase; n=1;
Methanospirillum hungatei JF-1|Rep: DNA-directed DNA
polymerase - Methanospirillum hungatei (strain JF-1 /
DSM 864)
Length = 368
Score = 48.8 bits (111), Expect = 1e-04
Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 3/71 (4%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGG---IIAVNYVARDLGVTRHM 561
++++ +DMD FY VE + NP+L GKP+ V+ +P +G G + +Y AR G+ M
Sbjct: 16 QIILHLDMDSFYASVEIRNNPDLSGKPV-VIGADPMQGTGRGVVSTCSYEARAFGIHSAM 74
Query: 562 RGDEAKEKCPN 594
+A CP+
Sbjct: 75 PISQAYHLCPH 85
>UniRef50_Q1IRF1 Cluster: DNA-directed DNA polymerase; n=2;
Acidobacteria|Rep: DNA-directed DNA polymerase -
Acidobacteria bacterium (strain Ellin345)
Length = 425
Score = 48.4 bits (110), Expect = 2e-04
Identities = 26/68 (38%), Positives = 37/68 (54%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGD 570
RV+ +DMD F+ VEE +P LKGK + V + + G + A +Y AR GV M
Sbjct: 16 RVIFHVDMDAFFVSVEELFDPSLKGKAVVVGGHRD-ERGVVSAASYAARKFGVHSAMPLR 74
Query: 571 EAKEKCPN 594
A + CP+
Sbjct: 75 TAAKLCPD 82
>UniRef50_O94623 Cluster: Deoxycytidyl transferase Rev1; n=3;
Schizosaccharomyces pombe|Rep: Deoxycytidyl transferase
Rev1 - Schizosaccharomyces pombe (Fission yeast)
Length = 935
Score = 48.4 bits (110), Expect = 2e-04
Identities = 24/71 (33%), Positives = 39/71 (54%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGD 570
R ++ +D DCF+ V + + EL+ KP+AV + K I + NY AR G+ M
Sbjct: 277 RFLLHVDFDCFFASVSTRFSHELRLKPVAVA--HGIKNSEIASCNYEARKFGIKNGMYVG 334
Query: 571 EAKEKCPNIQL 603
AK CP++++
Sbjct: 335 TAKNLCPSLRV 345
>UniRef50_Q14N03 Cluster: Putative dna polymerase iv c-terminal
truncated protein; n=1; Spiroplasma citri|Rep: Putative
dna polymerase iv c-terminal truncated protein -
Spiroplasma citri
Length = 90
Score = 48.0 bits (109), Expect = 2e-04
Identities = 24/71 (33%), Positives = 39/71 (54%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGD 570
+V+ IDM+ F+ + NP L+GKP+ V N + + NY AR LG+ M
Sbjct: 2 KVIFHIDMNSFFASCHQVANPHLQGKPLVVA--NSSRQAVVTTANYEARQLGINSPMPLY 59
Query: 571 EAKEKCPNIQL 603
+AKE C ++++
Sbjct: 60 KAKEICHHLEI 70
>UniRef50_Q4DBR5 Cluster: DNA damage repair protein, putative; n=3;
Trypanosoma|Rep: DNA damage repair protein, putative -
Trypanosoma cruzi
Length = 615
Score = 48.0 bits (109), Expect = 2e-04
Identities = 28/73 (38%), Positives = 41/73 (56%), Gaps = 3/73 (4%)
Frame = +1
Query: 400 VLIDMDCFYCQV--EEKLNPELKGKPIAVVQYNPWKGGG-IIAVNYVARDLGVTRHMRGD 570
V +DMD F+C V ++ N ++ KP+ + KG I + NY+AR GV M +
Sbjct: 66 VHLDMDAFFCSVVLAKEENAHMREKPVCIAA---GKGNSDISSSNYIARSFGVRAGMYVN 122
Query: 571 EAKEKCPNIQLPS 609
AKE CPN+Q+ S
Sbjct: 123 AAKELCPNLQVLS 135
>UniRef50_Q5K8U2 Cluster: Putative uncharacterized protein; n=2;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 658
Score = 48.0 bits (109), Expect = 2e-04
Identities = 27/71 (38%), Positives = 38/71 (53%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGD 570
+ ++ +DMD FY VE + +P LKGK V + G + +Y AR GV M G
Sbjct: 219 QTIIHVDMDAFYASVEVQRDPSLKGKAFGVGK------GVLCTASYEARKFGVRSAMAGF 272
Query: 571 EAKEKCPNIQL 603
AK+ CP+I L
Sbjct: 273 IAKKLCPHIIL 283
>UniRef50_Q1E8M0 Cluster: Putative uncharacterized protein; n=1;
Coccidioides immitis|Rep: Putative uncharacterized
protein - Coccidioides immitis
Length = 1021
Score = 48.0 bits (109), Expect = 2e-04
Identities = 23/71 (32%), Positives = 38/71 (53%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGD 570
R ++ +D D F+ V + NPEL KP+A+ + G I + NY AR G+ M
Sbjct: 348 RYILHVDFDSFFAAVSIRKNPELADKPVAIA-HGTGAGSEIASCNYPARAFGIQNGMWMQ 406
Query: 571 EAKEKCPNIQL 603
A + CP++++
Sbjct: 407 GALQMCPDLKV 417
>UniRef50_P58965 Cluster: DNA polymerase IV; n=11; Clostridia|Rep:
DNA polymerase IV - Thermoanaerobacter tengcongensis
Length = 384
Score = 48.0 bits (109), Expect = 2e-04
Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAV-NYVARDLGVTRHMRG 567
R ++ +DMD F+ +E++ NPE +GKP+ V G G+++ +Y AR G+ M
Sbjct: 3 RKIIHVDMDAFFASIEQQDNPEYRGKPVIV---GGLSGRGVVSTCSYEARKYGIHSAMPM 59
Query: 568 DEAKEKCP-NIQLP 606
AK+ CP I LP
Sbjct: 60 YMAKKLCPQGIFLP 73
>UniRef50_Q9I534 Cluster: DNA polymerase IV; n=8;
Gammaproteobacteria|Rep: DNA polymerase IV - Pseudomonas
aeruginosa
Length = 349
Score = 48.0 bits (109), Expect = 2e-04
Identities = 26/69 (37%), Positives = 39/69 (56%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGD 570
R ++ ID DCFY +E + +P L+GK +A V +P K G + +Y AR GV M
Sbjct: 2 RKIIHIDCDCFYAALEMRDDPSLRGKALA-VGGSPDKRGVVATCSYEARAYGVRSAMAMR 60
Query: 571 EAKEKCPNI 597
A + CP++
Sbjct: 61 TALKLCPDL 69
>UniRef50_Q41FB7 Cluster: DNA-directed DNA polymerase; n=1;
Exiguobacterium sibiricum 255-15|Rep: DNA-directed DNA
polymerase - Exiguobacterium sibiricum 255-15
Length = 360
Score = 47.6 bits (108), Expect = 3e-04
Identities = 24/67 (35%), Positives = 35/67 (52%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGD 570
R ++ +DMD FY VE++ P LKG P+ +V P G + +Y AR G+ M
Sbjct: 4 RKIIHVDMDAFYASVEQRDRPHLKGVPV-IVGGPPHARGVVATCSYEARKYGIHSAMPSR 62
Query: 571 EAKEKCP 591
A + CP
Sbjct: 63 RAFQLCP 69
>UniRef50_Q54KS3 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 517
Score = 47.6 bits (108), Expect = 3e-04
Identities = 31/74 (41%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGD 570
R + IDMD FY VEE N EL G P+AV + ++ NY AR GV + G
Sbjct: 81 RTFIHIDMDAFYANVEEMDNKELIGHPVAVGSIDM-----LVTSNYAARAYGVRSGLPGL 135
Query: 571 EAKEKCPN-IQLPS 609
A + CP+ I LPS
Sbjct: 136 LAMKLCPHLIILPS 149
>UniRef50_Q4WQ07 Cluster: DNA polymerase iota, putative; n=5;
Trichocomaceae|Rep: DNA polymerase iota, putative -
Aspergillus fumigatus (Sartorya fumigata)
Length = 596
Score = 47.6 bits (108), Expect = 3e-04
Identities = 30/91 (32%), Positives = 48/91 (52%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGD 570
R+++ D DCFY V E P LK P+AV Q ++ NY AR G+ +
Sbjct: 10 RIIIHFDYDCFYASVFEAEQPVLKSLPLAVQQKQI-----VVTCNYEARRRGLRKLQLIK 64
Query: 571 EAKEKCPNIQLPSVPCHRGKADISKYRDAGK 663
EAK+ CP++ + G+ D++++R+A K
Sbjct: 65 EAKQICPDVVIV-----LGE-DLTRFRNASK 89
>UniRef50_A7DSF9 Cluster: DNA-directed DNA polymerase; n=1;
Candidatus Nitrosopumilus maritimus SCM1|Rep:
DNA-directed DNA polymerase - Candidatus Nitrosopumilus
maritimus SCM1
Length = 364
Score = 47.6 bits (108), Expect = 3e-04
Identities = 25/54 (46%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKG--GGIIAVNYVARDLG 546
R+V ID D FY Q EE +PELK KP+ V ++ G G I NY AR G
Sbjct: 4 RIVFHIDFDYFYAQCEEIRSPELKSKPVCVCVFSDRGGDSGAIATANYTARKYG 57
>UniRef50_Q8G430 Cluster: DNA-damage-inducible protein P; n=4;
Bifidobacterium|Rep: DNA-damage-inducible protein P -
Bifidobacterium longum
Length = 448
Score = 47.2 bits (107), Expect = 4e-04
Identities = 29/71 (40%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Frame = +1
Query: 397 VVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGDEA 576
V+ IDMD FY +E NP LKGKP+ ++ P + A +Y AR G+ M A
Sbjct: 47 VLHIDMDAFYASLEVARNPGLKGKPV-IIGTGP--RAVVSAASYEARKYGINSAMPAARA 103
Query: 577 KEKCPN-IQLP 606
CPN I LP
Sbjct: 104 HRLCPNGIFLP 114
>UniRef50_Q1N612 Cluster: DNA polymerase IV; n=1; Oceanobacter sp.
RED65|Rep: DNA polymerase IV - Oceanobacter sp. RED65
Length = 366
Score = 47.2 bits (107), Expect = 4e-04
Identities = 25/71 (35%), Positives = 40/71 (56%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGD 570
R V+ +D DCF+ VE + +P+ + P+A+ + + G I NYVAR GV M
Sbjct: 3 RQVLHVDCDCFFAAVEMRDSPQYRDIPLAIGGSSD-RRGVISTCNYVARAYGVRSAMPSG 61
Query: 571 EAKEKCPNIQL 603
+A + CP++ L
Sbjct: 62 QALKLCPDLML 72
>UniRef50_A6X194 Cluster: DNA-directed DNA polymerase; n=1;
Ochrobactrum anthropi ATCC 49188|Rep: DNA-directed DNA
polymerase - Ochrobactrum anthropi (strain ATCC 49188 /
DSM 6882 / NCTC 12168)
Length = 424
Score = 47.2 bits (107), Expect = 4e-04
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Frame = +1
Query: 406 IDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGDEAKEK 585
+D D F+ VE++ + L+G+PI VV + +IA + A++ GV M EAK
Sbjct: 12 LDFDGFFASVEQQCDRRLRGRPIGVVPFEGTDRTAVIACSKEAKNFGVKNVMPIKEAKRL 71
Query: 586 CPN-IQLPSVP 615
CP+ I +P P
Sbjct: 72 CPDLILVPQKP 82
>UniRef50_A6CAV0 Cluster: DNA-damage-inducible protein P; n=1;
Planctomyces maris DSM 8797|Rep: DNA-damage-inducible
protein P - Planctomyces maris DSM 8797
Length = 388
Score = 47.2 bits (107), Expect = 4e-04
Identities = 25/60 (41%), Positives = 34/60 (56%)
Frame = +1
Query: 412 MDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGDEAKEKCP 591
MD FY +EE+ +PEL+G+PI +V G + A NY AR GV M A++ CP
Sbjct: 1 MDAFYASIEERDHPELQGQPI-IVGGRAEHRGVVSAANYPARKFGVHSAMPMKTARQLCP 59
>UniRef50_A3EWL3 Cluster: Polymerase ATREV1-1105; n=8; Arabidopsis
thaliana|Rep: Polymerase ATREV1-1105 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 1105
Score = 47.2 bits (107), Expect = 4e-04
Identities = 31/74 (41%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Frame = +1
Query: 397 VVLIDMDCFYCQVEEKLNPELKGKPIAVVQY-NPWKGGGIIAVNYVARDLGVTRHMRGDE 573
++ ID+DCF+ V K EL KP+AV NP I + NY AR GV M
Sbjct: 375 IIHIDLDCFFVSVVIKNRLELHDKPVAVCHSDNPKGTAEISSANYPARAYGVKAGMFVRH 434
Query: 574 AKEKCPNIQLPSVP 615
AK+ CP QL VP
Sbjct: 435 AKDLCP--QLVIVP 446
>UniRef50_Q4Q268 Cluster: DNA damage repair protein, putative; n=3;
Leishmania|Rep: DNA damage repair protein, putative -
Leishmania major
Length = 619
Score = 47.2 bits (107), Expect = 4e-04
Identities = 30/74 (40%), Positives = 40/74 (54%), Gaps = 5/74 (6%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPE---LKGKPIAVV--QYNPWKGGGIIAVNYVARDLGVTR 555
R V IDMD F+C V+ PE LK KP+ + +YN I + NYVAR G+
Sbjct: 57 RTFVHIDMDAFFCSVQ-LAKPEYAHLKTKPVGIAAGKYN----SDISSCNYVARSYGIHA 111
Query: 556 HMRGDEAKEKCPNI 597
M + AKE+CP +
Sbjct: 112 GMYVNSAKERCPEL 125
>UniRef50_A3GH67 Cluster: DNA repair protein; n=1; Pichia
stipitis|Rep: DNA repair protein - Pichia stipitis
(Yeast)
Length = 1118
Score = 47.2 bits (107), Expect = 4e-04
Identities = 27/71 (38%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPEL--KGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMR 564
RV+ +D DCF+ PEL PIAV + K + + NYVAR+ GV M
Sbjct: 405 RVIFHVDFDCFFATASCLNRPELDINKDPIAVT--HGGKSSDVASCNYVARNFGVKNGMW 462
Query: 565 GDEAKEKCPNI 597
+AK+ CPN+
Sbjct: 463 VSQAKKLCPNL 473
>UniRef50_A7I5X9 Cluster: DNA-directed DNA polymerase; n=1;
Candidatus Methanoregula boonei 6A8|Rep: DNA-directed
DNA polymerase - Methanoregula boonei (strain 6A8)
Length = 365
Score = 47.2 bits (107), Expect = 4e-04
Identities = 28/70 (40%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGG---IIAVNYVARDLGVTRHM 561
R+V+ DMDCFY VE +PE+ GK + VV +P G G + +Y AR GV M
Sbjct: 11 RIVLHADMDCFYAAVEMHDHPEIAGKAV-VVGADPQGGAGRGVVSTASYEARAFGVRSAM 69
Query: 562 RGDEAKEKCP 591
+A CP
Sbjct: 70 PISQAYRLCP 79
>UniRef50_UPI0000DB76DA Cluster: PREDICTED: similar to Rev1
CG12189-PA; n=1; Apis mellifera|Rep: PREDICTED: similar
to Rev1 CG12189-PA - Apis mellifera
Length = 844
Score = 46.8 bits (106), Expect = 5e-04
Identities = 28/73 (38%), Positives = 39/73 (53%), Gaps = 4/73 (5%)
Frame = +1
Query: 394 VVVLIDMDCFYCQVEEKLNPELKGKPIAVV----QYNPWKGGGIIAVNYVARDLGVTRHM 561
V++ IDMDCF+ V + PELKG P+AV N I + +Y AR GV M
Sbjct: 226 VIMHIDMDCFFVSVGLRDKPELKGLPVAVTHAKGNKNSCSLSEIASCSYEARKAGVKNGM 285
Query: 562 RGDEAKEKCPNIQ 600
EA + CP+++
Sbjct: 286 FLGEALKICPDLR 298
>UniRef50_A7E7M1 Cluster: Putative uncharacterized protein; n=1;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 1255
Score = 46.8 bits (106), Expect = 5e-04
Identities = 27/71 (38%), Positives = 37/71 (52%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGD 570
R ++ +D D F+C V K PE KP AVV + G I + NY AR GV M
Sbjct: 435 RYIMHVDFDSFFCAVSLKSAPEYFDKP-AVVAHGNGTGSEIASCNYPARVFGVKNGMWMK 493
Query: 571 EAKEKCPNIQL 603
A + CP+I++
Sbjct: 494 NAIKLCPDIKV 504
>UniRef50_A6SHZ0 Cluster: Putative uncharacterized protein; n=1;
Botryotinia fuckeliana B05.10|Rep: Putative
uncharacterized protein - Botryotinia fuckeliana B05.10
Length = 1122
Score = 46.8 bits (106), Expect = 5e-04
Identities = 26/71 (36%), Positives = 37/71 (52%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGD 570
R V+ +D D F+C V K E KP AVV + G I + NY AR+ G+ M
Sbjct: 435 RYVMHVDFDSFFCAVSLKSASEFVDKP-AVVAHGSGTGSEIASCNYPAREFGIKNGMWMK 493
Query: 571 EAKEKCPNIQL 603
A + CP+I++
Sbjct: 494 SAIKLCPDIKV 504
>UniRef50_A5DE10 Cluster: Putative uncharacterized protein; n=1;
Pichia guilliermondii|Rep: Putative uncharacterized
protein - Pichia guilliermondii (Yeast) (Candida
guilliermondii)
Length = 673
Score = 46.8 bits (106), Expect = 5e-04
Identities = 27/71 (38%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Frame = +1
Query: 394 VVVLIDMDCFYCQVEE-KLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGD 570
V+ L+DM+ F+ QVE+ +LN + P+ VQ+ +IAV+Y AR G+ R
Sbjct: 43 VIALVDMNAFFAQVEQTRLNLSIDD-PVVCVQWLT-----LIAVSYAARKYGINRMDNVK 96
Query: 571 EAKEKCPNIQL 603
A+EKCP++ L
Sbjct: 97 SAREKCPDVIL 107
>UniRef50_Q2S2C0 Cluster: Putative DNA polymerase IV; n=1;
Salinibacter ruber DSM 13855|Rep: Putative DNA
polymerase IV - Salinibacter ruber (strain DSM 13855)
Length = 373
Score = 46.4 bits (105), Expect = 6e-04
Identities = 28/70 (40%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPE-LKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRG 567
R +V +DMD FY Q+E++ P+ GKPIAV P G + +Y AR GV
Sbjct: 19 RRIVHVDMDAFYAQIEQRDFPDRYAGKPIAVGGDPP--RGVVQTASYEARPYGVHSAQPA 76
Query: 568 DEAKEKCPNI 597
EA KCP++
Sbjct: 77 VEADRKCPDL 86
>UniRef50_Q11UG7 Cluster: DNA polymerase IV; n=1; Cytophaga
hutchinsonii ATCC 33406|Rep: DNA polymerase IV -
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 385
Score = 46.4 bits (105), Expect = 6e-04
Identities = 23/67 (34%), Positives = 38/67 (56%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGD 570
R ++ +D+D F+ VE PELKGKP+ + + + G + + +Y AR G+ M
Sbjct: 3 RSIIHMDLDSFFVSVELLRRPELKGKPLIIGGSS--ERGVVASCSYEARKFGIHSAMSSQ 60
Query: 571 EAKEKCP 591
+AK+ CP
Sbjct: 61 KAKKLCP 67
>UniRef50_Q0FDK2 Cluster: UMUC-like DNA-repair protein; n=1; alpha
proteobacterium HTCC2255|Rep: UMUC-like DNA-repair
protein - alpha proteobacterium HTCC2255
Length = 401
Score = 46.4 bits (105), Expect = 6e-04
Identities = 25/68 (36%), Positives = 36/68 (52%)
Frame = +1
Query: 400 VLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGDEAK 579
+ IDM+ F+ VE+ P L+GKP+ + G ++A +Y A+ GV M EAK
Sbjct: 7 IYIDMNSFFASVEQHEEPYLRGKPVGITAME-GDVGCLVAASYEAKYFGVKTTMSIKEAK 65
Query: 580 EKCPNIQL 603
CP I L
Sbjct: 66 ILCPKIIL 73
>UniRef50_A6QW93 Cluster: Putative uncharacterized protein; n=1;
Ajellomyces capsulatus NAm1|Rep: Putative
uncharacterized protein - Ajellomyces capsulatus NAm1
Length = 744
Score = 46.4 bits (105), Expect = 6e-04
Identities = 32/91 (35%), Positives = 49/91 (53%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGD 570
R+++ D D FY V E NP LK P+AV Q ++ NY A G+ +
Sbjct: 14 RIILHFDYDSFYASVFEVENPALKAVPLAVQQKQI-----VVTCNYEACRRGLRKLQLIK 68
Query: 571 EAKEKCPNIQLPSVPCHRGKADISKYRDAGK 663
EAK+ CP++ + VP G+ D++++RDA K
Sbjct: 69 EAKKVCPDVVI--VP---GE-DLTRFRDASK 93
>UniRef50_O74944 Cluster: DNA polymerase kappa; n=1;
Schizosaccharomyces pombe|Rep: DNA polymerase kappa -
Schizosaccharomyces pombe (Fission yeast)
Length = 547
Score = 46.4 bits (105), Expect = 6e-04
Identities = 25/69 (36%), Positives = 38/69 (55%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGD 570
+++V +D D FY +EE NP+LK P+AV + + NYVAR GV M
Sbjct: 130 QIIVHVDCDAFYASIEELKNPKLKSLPMAVGK------SVLCTANYVARKFGVRSAMPEF 183
Query: 571 EAKEKCPNI 597
A++ CP++
Sbjct: 184 IARKICPDL 192
>UniRef50_Q6AL48 Cluster: Probable DNA-damage-inducible protein P;
n=1; Desulfotalea psychrophila|Rep: Probable
DNA-damage-inducible protein P - Desulfotalea
psychrophila
Length = 376
Score = 46.0 bits (104), Expect = 8e-04
Identities = 25/69 (36%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAV-NYVARDLGVTRHMRG 567
R ++ IDMD F+ +E++ PEL+ KP+ +V P +G G++A Y AR G+ M
Sbjct: 4 RKIIHIDMDAFFASIEQRDRPELRKKPL-IVGGLP-RGRGVVATCCYEARRYGIHSAMSA 61
Query: 568 DEAKEKCPN 594
+ A + CP+
Sbjct: 62 NRAYKLCPH 70
>UniRef50_Q5FLW9 Cluster: DNA-damage-inducible protein; n=5;
Lactobacillus|Rep: DNA-damage-inducible protein -
Lactobacillus acidophilus
Length = 412
Score = 46.0 bits (104), Expect = 8e-04
Identities = 29/77 (37%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQ-YNPWKGGGIIAV-NYVARDLGVTRHMR 564
R ++ +DMD FY VE +PE K K + V Q G G++A NYVAR GV M
Sbjct: 53 RRIIHLDMDAFYASVEINRHPEYKDKALVVGQDPRDNNGHGVVATCNYVARKYGVHSAMA 112
Query: 565 GDEAKEKCPNIQLPSVP 615
+A P ++ VP
Sbjct: 113 SIQALRLVPKDKIVFVP 129
>UniRef50_Q2AFE9 Cluster: UMUC-like DNA-repair protein; n=1;
Halothermothrix orenii H 168|Rep: UMUC-like DNA-repair
protein - Halothermothrix orenii H 168
Length = 385
Score = 46.0 bits (104), Expect = 8e-04
Identities = 23/65 (35%), Positives = 34/65 (52%)
Frame = +1
Query: 397 VVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGDEA 576
++ +DMD F+ VE+ NPE + KP+ V + G + +Y AR GV M EA
Sbjct: 5 IMHVDMDAFFASVEQLDNPEFRRKPVIVGGIDLENRGVVSTASYEARKYGVKSAMSVVEA 64
Query: 577 KEKCP 591
+ CP
Sbjct: 65 RRLCP 69
>UniRef50_A6NU31 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 414
Score = 46.0 bits (104), Expect = 8e-04
Identities = 29/80 (36%), Positives = 45/80 (56%), Gaps = 2/80 (2%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELK--GKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMR 564
R ++ D++ FY VE PEL+ GKP+AV + G I+A N A+ +GV
Sbjct: 3 RTILHCDLNSFYASVELLSLPELRESGKPVAVCGDPESRHGIILAKNEPAKAMGVKTAET 62
Query: 565 GDEAKEKCPNIQLPSVPCHR 624
+A++KCP++ L +P HR
Sbjct: 63 IWQARQKCPDLVL--LPAHR 80
>UniRef50_A2QJ22 Cluster: Contig An04c0170, complete genome; n=1;
Aspergillus niger|Rep: Contig An04c0170, complete genome
- Aspergillus niger
Length = 615
Score = 46.0 bits (104), Expect = 8e-04
Identities = 31/85 (36%), Positives = 44/85 (51%)
Frame = +1
Query: 409 DMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGDEAKEKC 588
D DCFY V E P LK P+AV Q ++ NY AR G+ + EAK+ C
Sbjct: 62 DYDCFYASVFEVEQPVLKSLPLAVQQKQI-----VVTCNYEARRRGLRKLQLIKEAKQIC 116
Query: 589 PNIQLPSVPCHRGKADISKYRDAGK 663
P++ + G+ D+S++RDA K
Sbjct: 117 PDVVIV-----LGE-DLSRFRDASK 135
>UniRef50_Q8F8Q2 Cluster: DNA polymerase IV; n=6; Bacteria|Rep: DNA
polymerase IV - Leptospira interrogans
Length = 364
Score = 46.0 bits (104), Expect = 8e-04
Identities = 25/67 (37%), Positives = 36/67 (53%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGD 570
R ++ +DMD FY VE++ PE KGKP+ +V P + A +Y AR GV M
Sbjct: 6 RKIIHVDMDAFYASVEQRDFPEYKGKPL-IVGGPPNSRSVVSAASYEARKFGVRSAMPCS 64
Query: 571 EAKEKCP 591
+A + P
Sbjct: 65 KAAQLAP 71
>UniRef50_Q18V51 Cluster: UMUC-like DNA-repair protein; n=2;
Desulfitobacterium hafniense|Rep: UMUC-like DNA-repair
protein - Desulfitobacterium hafniense (strain DCB-2)
Length = 423
Score = 45.6 bits (103), Expect = 0.001
Identities = 28/83 (33%), Positives = 43/83 (51%)
Frame = +1
Query: 397 VVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGDEA 576
+VL D + +Y + +NPEL+GKP+ V + G I+ +Y AR GV M +A
Sbjct: 16 IVLFDANSYYASCHQAVNPELQGKPLLVAGDPRNRTGIILTASYEARFYGVKTAMPLFQA 75
Query: 577 KEKCPNIQLPSVPCHRGKADISK 645
+ CP + S P R D+S+
Sbjct: 76 LKLCPEAVVLS-PDFRLYLDLSR 97
>UniRef50_A3ZXX8 Cluster: ImpB/MucB/SamB family protein; n=1;
Blastopirellula marina DSM 3645|Rep: ImpB/MucB/SamB
family protein - Blastopirellula marina DSM 3645
Length = 407
Score = 45.6 bits (103), Expect = 0.001
Identities = 24/66 (36%), Positives = 39/66 (59%)
Frame = +1
Query: 406 IDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGDEAKEK 585
+DM+ ++ VE++L PEL+ +P+ VV + IIA +Y A+ GV + +A+
Sbjct: 9 MDMNSYFASVEQQLRPELRKQPVGVVPLDT-DSTCIIAASYDAKRSGVKVGTKVYDARRL 67
Query: 586 CPNIQL 603
CP IQL
Sbjct: 68 CPGIQL 73
>UniRef50_A0LDH9 Cluster: DNA-directed DNA polymerase; n=1;
Magnetococcus sp. MC-1|Rep: DNA-directed DNA polymerase
- Magnetococcus sp. (strain MC-1)
Length = 357
Score = 45.6 bits (103), Expect = 0.001
Identities = 24/69 (34%), Positives = 35/69 (50%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGD 570
R ++ IDMD F+ VE++ P L+GKP+ V P + A +Y AR G+ M
Sbjct: 4 RKIIHIDMDAFFASVEQRDFPHLQGKPVVVGGLGP--RAVVAAASYEARQFGIHSAMPMG 61
Query: 571 EAKEKCPNI 597
AK C +
Sbjct: 62 RAKNLCDQL 70
>UniRef50_Q04049 Cluster: DNA polymerase eta; n=4;
Saccharomycetales|Rep: DNA polymerase eta -
Saccharomyces cerevisiae (Baker's yeast)
Length = 632
Score = 45.6 bits (103), Expect = 0.001
Identities = 29/83 (34%), Positives = 41/83 (49%)
Frame = +1
Query: 406 IDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGDEAKEK 585
IDM+ F+ QVE+ K P+ VQ+N IIAV+Y AR G++R EA +K
Sbjct: 29 IDMNAFFAQVEQMRCGLSKEDPVVCVQWN-----SIIAVSYAARKYGISRMDTIQEALKK 83
Query: 586 CPNIQLPSVPCHRGKADISKYRD 654
C N+ + D +Y D
Sbjct: 84 CSNLIPIHTAVFKKGEDFWQYHD 106
>UniRef50_A5D243 Cluster: Nucleotidyltransferase/DNA polymerase;
n=2; Clostridia|Rep: Nucleotidyltransferase/DNA
polymerase - Pelotomaculum thermopropionicum SI
Length = 402
Score = 45.2 bits (102), Expect = 0.001
Identities = 23/65 (35%), Positives = 34/65 (52%)
Frame = +1
Query: 397 VVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGDEA 576
++L DM+ FY V + + P LKGKP+ V + G ++A + A+ GV M EA
Sbjct: 5 ILLADMNSFYASVHQAMEPRLKGKPVIVGGDPARRHGIVLAASVEAKACGVKTGMTVREA 64
Query: 577 KEKCP 591
CP
Sbjct: 65 AALCP 69
>UniRef50_A0YE03 Cluster: DNA polymerase IV; n=1; marine gamma
proteobacterium HTCC2143|Rep: DNA polymerase IV - marine
gamma proteobacterium HTCC2143
Length = 388
Score = 45.2 bits (102), Expect = 0.001
Identities = 29/87 (33%), Positives = 44/87 (50%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGD 570
R ++ D DCF+ VE + +P L G+P+A V + + G I NY AR GV M
Sbjct: 29 RKIIHCDADCFFVAVEMRDDPSLFGRPVA-VGGSADRRGVISTCNYEARAYGVGSAMATA 87
Query: 571 EAKEKCPNIQLPSVPCHRGKADISKYR 651
A+ CP++ + S + K S+ R
Sbjct: 88 TARRLCPDLIVLSGNMEKYKLAASQMR 114
>UniRef50_Q4Q8C3 Cluster: DNA polymerase kappa, putative; n=2;
Leishmania|Rep: DNA polymerase kappa, putative -
Leishmania major
Length = 293
Score = 45.2 bits (102), Expect = 0.001
Identities = 25/59 (42%), Positives = 33/59 (55%)
Frame = +1
Query: 421 FYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGDEAKEKCPNI 597
FY VEEKL+P L+ +P AV Y + NY+AR GV M G AK+ CP++
Sbjct: 2 FYAAVEEKLDPSLRERPFAVGSY-----AMLTPSNYIARAYGVRSGMPGFIAKKLCPSL 55
>UniRef50_A7REV5 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 870
Score = 45.2 bits (102), Expect = 0.001
Identities = 21/40 (52%), Positives = 29/40 (72%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGG 510
RV++ IDMDCF+ V + +PEL GKP+AV ++N GGG
Sbjct: 284 RVIMHIDMDCFFVSVYVRDHPELDGKPVAVSRFN---GGG 320
>UniRef50_A7H6L7 Cluster: DNA-directed DNA polymerase; n=4;
Cystobacterineae|Rep: DNA-directed DNA polymerase -
Anaeromyxobacter sp. Fw109-5
Length = 399
Score = 44.8 bits (101), Expect = 0.002
Identities = 22/67 (32%), Positives = 38/67 (56%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGD 570
R ++ +D+D F+ VE+ + L+G+P+ V P + G + A +Y AR GV M
Sbjct: 5 RTILHLDLDAFFASVEQLDDASLRGRPVIV--GGPSRRGVVCAASYEARRFGVRSAMPTA 62
Query: 571 EAKEKCP 591
+A++ CP
Sbjct: 63 QARKLCP 69
>UniRef50_A7BD32 Cluster: Putative uncharacterized protein; n=1;
Actinomyces odontolyticus ATCC 17982|Rep: Putative
uncharacterized protein - Actinomyces odontolyticus ATCC
17982
Length = 447
Score = 44.8 bits (101), Expect = 0.002
Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Frame = +1
Query: 397 VVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGII-AVNYVARDLGVTRHMRGDE 573
++ +DMD F+ QVE + +P L G+PI V G G++ + Y AR LGV M
Sbjct: 23 ILHVDMDSFFAQVEMREDPSLVGRPIIV---GGTSGRGVVTSATYEARALGVRAGMPTSR 79
Query: 574 AKEKCP 591
A+ CP
Sbjct: 80 ARALCP 85
>UniRef50_Q5AHQ7 Cluster: Putative uncharacterized protein RAD30;
n=2; Candida albicans|Rep: Putative uncharacterized
protein RAD30 - Candida albicans (Yeast)
Length = 640
Score = 44.8 bits (101), Expect = 0.002
Identities = 23/67 (34%), Positives = 35/67 (52%)
Frame = +1
Query: 397 VVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGDEA 576
+ LID++ F+ QVE+ P+ Q+N +IAV+Y +R G+TR
Sbjct: 49 IALIDLNAFFAQVEQIRLNLTNQDPVVCAQWN-----SVIAVSYASRKFGITRMDTIASC 103
Query: 577 KEKCPNI 597
K KCPN+
Sbjct: 104 KSKCPNV 110
>UniRef50_A0RUK5 Cluster: Nucleotidyltransferase/DNA polymerase
involved in DNA repair; n=2; Thermoprotei|Rep:
Nucleotidyltransferase/DNA polymerase involved in DNA
repair - Cenarchaeum symbiosum
Length = 363
Score = 44.8 bits (101), Expect = 0.002
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKG--GGIIAVNYVARDLGVTRHMR 564
R+V+ +D D F+ Q EE PEL+ P+ V ++ G G + NY AR GV +
Sbjct: 3 RIVLHVDFDHFFAQCEEARRPELRSGPVVVCVFSDRGGDSGAVATANYAARKFGVKSGIP 62
Query: 565 GDEAKEK 585
AK +
Sbjct: 63 ISHAKSR 69
>UniRef50_Q2LSC9 Cluster: Nucleotidyltransferase/DNA polymerase
protein; n=2; Syntrophus aciditrophicus SB|Rep:
Nucleotidyltransferase/DNA polymerase protein -
Syntrophus aciditrophicus (strain SB)
Length = 435
Score = 44.4 bits (100), Expect = 0.003
Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGD 570
+ ++ ID D F+ EE ++PEL+GKPI + G + +Y A+ GV R +
Sbjct: 13 QAILHIDGDAFFTSCEEAIHPELRGKPIIA----GGERGIVACASYAAKKQGVMRGVPLH 68
Query: 571 EAKEKCPN-IQLPS 609
+A++ CP + LPS
Sbjct: 69 QARKMCPGLVILPS 82
>UniRef50_Q0AWD6 Cluster: DNA-directed DNA polymerase; n=7;
Clostridiales|Rep: DNA-directed DNA polymerase -
Syntrophomonas wolfei subsp. wolfei (strain Goettingen)
Length = 419
Score = 44.4 bits (100), Expect = 0.003
Identities = 24/79 (30%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGD 570
RV++ D++ FY VE PE++ K +AV + G ++A NY+A++ G+
Sbjct: 3 RVILHSDLNNFYASVECLHRPEIRNKAVAVCGDPAARHGIVLAKNYLAKESGIQTGEVIW 62
Query: 571 EAKEKCPNIQL--PSVPCH 621
+A++KCP + + P+ P +
Sbjct: 63 QAQQKCPELVVVPPNYPLY 81
>UniRef50_A0RN38 Cluster: DNA polymerase IV 1, putative; n=1;
Campylobacter fetus subsp. fetus 82-40|Rep: DNA
polymerase IV 1, putative - Campylobacter fetus subsp.
fetus (strain 82-40)
Length = 380
Score = 44.4 bits (100), Expect = 0.003
Identities = 25/71 (35%), Positives = 37/71 (52%), Gaps = 7/71 (9%)
Frame = +1
Query: 406 IDMDCFYCQVEEKLNPELKGKPIAVVQYNPW-------KGGGIIAVNYVARDLGVTRHMR 564
ID+DCF+ +NP+L GK +AV N + G I++ +Y AR LG+ M
Sbjct: 5 IDLDCFFVSASRTVNPDLNGKVVAVAGGNKTDIFGDFIESGIIVSASYEARRLGIGCTMH 64
Query: 565 GDEAKEKCPNI 597
A++ PNI
Sbjct: 65 SSIARKIYPNI 75
>UniRef50_Q86ZI6 Cluster: Related to DNA Polymerase iota; n=2;
Neurospora crassa|Rep: Related to DNA Polymerase iota -
Neurospora crassa
Length = 753
Score = 44.4 bits (100), Expect = 0.003
Identities = 30/87 (34%), Positives = 43/87 (49%)
Frame = +1
Query: 403 LIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGDEAKE 582
L D+DCFY QV E P LK P+ + Q + + NY AR LGV + M A
Sbjct: 47 LSDLDCFYAQVYENKTPSLKSLPLGIRQKSL-----LATCNYPARRLGVKKLMSIASALA 101
Query: 583 KCPNIQLPSVPCHRGKADISKYRDAGK 663
CP++ + G+ D++ +RD K
Sbjct: 102 ICPDLVIVD-----GE-DLTPFRDVSK 122
>UniRef50_A3LN71 Cluster: DNA polymerase eta subunit; n=1; Pichia
stipitis|Rep: DNA polymerase eta subunit - Pichia
stipitis (Yeast)
Length = 733
Score = 44.4 bits (100), Expect = 0.003
Identities = 26/69 (37%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Frame = +1
Query: 394 VVVLIDMDCFYCQVEE-KLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGD 570
V+ LID++ F+ QVE+ +L ++ P+ VQ++ +IAV+Y AR G+ R
Sbjct: 45 VISLIDLNAFFAQVEQLRLGLPVE-TPVVCVQWST-----LIAVSYAARKFGIGRLDTLQ 98
Query: 571 EAKEKCPNI 597
AK+KCPN+
Sbjct: 99 SAKQKCPNL 107
>UniRef50_Q9KPS5 Cluster: DNA polymerase IV; n=56; cellular
organisms|Rep: DNA polymerase IV - Vibrio cholerae
Length = 360
Score = 44.4 bits (100), Expect = 0.003
Identities = 24/71 (33%), Positives = 37/71 (52%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGD 570
R ++ +DMDCF+ VE + NP + +AV + + G I NY AR GV M
Sbjct: 6 RKIIHVDMDCFFAAVEMRDNPAYREIALAVGGHEKQR-GVISTCNYQARKFGVRSAMPTA 64
Query: 571 EAKEKCPNIQL 603
+A + CP + +
Sbjct: 65 QALKLCPQLHV 75
>UniRef50_Q1ZIG5 Cluster: DNA polymerase IV; n=2;
Alteromonadales|Rep: DNA polymerase IV - Psychromonas
sp. CNPT3
Length = 361
Score = 44.0 bits (99), Expect = 0.003
Identities = 23/69 (33%), Positives = 38/69 (55%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGD 570
R ++ IDMDCFY VE + +P+ + +A + + + NY+AR GV M
Sbjct: 8 RKIIHIDMDCFYAAVEMRDHPQYRDIALA-IGGRVDRRSVLSTCNYLARQFGVHSAMPSF 66
Query: 571 EAKEKCPNI 597
+AK+ CP++
Sbjct: 67 KAKQLCPDL 75
>UniRef50_Q0BVN8 Cluster: DNA polymerase IV; n=3;
Alphaproteobacteria|Rep: DNA polymerase IV -
Granulobacter bethesdensis (strain ATCC BAA-1260 /
CGDNIH1)
Length = 427
Score = 44.0 bits (99), Expect = 0.003
Identities = 29/81 (35%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
Frame = +1
Query: 397 VVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGDEA 576
V +D D FY VE+ PEL KP+ V K G + A Y+AR GV M +A
Sbjct: 39 VAHVDCDAFYASVEKHDRPELAAKPVLV---GGGKRGVVAAACYIARMQGVRSAMPMFQA 95
Query: 577 KEKCPN--IQLPSVPCHRGKA 633
+ CP+ + P P +R A
Sbjct: 96 LKACPDAVVLPPDFPKYRAAA 116
>UniRef50_A7D0X1 Cluster: DNA-directed DNA polymerase; n=1;
Halorubrum lacusprofundi ATCC 49239|Rep: DNA-directed
DNA polymerase - Halorubrum lacusprofundi ATCC 49239
Length = 476
Score = 44.0 bits (99), Expect = 0.003
Identities = 25/69 (36%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAV-VQYNPWKG-GGIIAVNYVARDLGVTRHMR 564
R+V +DMDCFY E PEL +P+ V + Y + G + +Y AR GV M
Sbjct: 19 RIVFHVDMDCFYASCERLRRPELADEPLVVGMGYEAGEAIGAVATASYEARAFGVESAMP 78
Query: 565 GDEAKEKCP 591
EA + P
Sbjct: 79 ISEALDLLP 87
>UniRef50_A6X583 Cluster: DNA-directed DNA polymerase; n=3;
Rhizobiales|Rep: DNA-directed DNA polymerase -
Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 /
NCTC 12168)
Length = 453
Score = 43.6 bits (98), Expect = 0.004
Identities = 25/63 (39%), Positives = 34/63 (53%)
Frame = +1
Query: 406 IDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGDEAKEK 585
ID D FY VE++ NPEL+ KP+ + K G + Y+AR GV M +A E
Sbjct: 60 IDCDAFYASVEKRDNPELRDKPLII---GGGKRGVVSTACYLARIHGVRSAMPMFKALEA 116
Query: 586 CPN 594
CP+
Sbjct: 117 CPD 119
>UniRef50_Q8PT42 Cluster: DNA polymerase IV 2; n=4;
Methanomicrobia|Rep: DNA polymerase IV 2 -
Methanosarcina mazei (Methanosarcina frisia)
Length = 369
Score = 43.6 bits (98), Expect = 0.004
Identities = 27/72 (37%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGG---GIIAV-NYVARDLGVTRH 558
R+V +DMD F+ VE + PELK P+ +V +P KGG G+++ +Y AR G+
Sbjct: 15 RIVFHVDMDSFFASVEVRERPELKNLPV-IVGSDP-KGGSGRGVVSTCSYEARKYGIHSA 72
Query: 559 MRGDEAKEKCPN 594
M +A CP+
Sbjct: 73 MPISQAYRFCPD 84
>UniRef50_Q8E897 Cluster: SO_S mutagenesis protein RulB; n=19;
Gammaproteobacteria|Rep: SO_S mutagenesis protein RulB -
Shewanella oneidensis
Length = 418
Score = 43.2 bits (97), Expect = 0.006
Identities = 18/62 (29%), Positives = 35/62 (56%)
Frame = +1
Query: 403 LIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGDEAKE 582
L+D + FYC E+ P+ +GKP+ V+ N G ++A N A++ G+ + + + ++
Sbjct: 4 LVDANSFYCSCEQVFRPDWRGKPVVVLSNN---DGMVVAANRQAKEAGIPKFVPYFQIRD 60
Query: 583 KC 588
C
Sbjct: 61 LC 62
>UniRef50_A0JV83 Cluster: DNA-directed DNA polymerase; n=12;
Actinobacteria (class)|Rep: DNA-directed DNA polymerase
- Arthrobacter sp. (strain FB24)
Length = 408
Score = 43.2 bits (97), Expect = 0.006
Identities = 24/66 (36%), Positives = 36/66 (54%)
Frame = +1
Query: 397 VVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGDEA 576
++ +DMD F+ VE + PEL GKP+ +V Y P +++ +Y AR GV M A
Sbjct: 22 IMHVDMDAFFVSVELRSRPELVGKPV-IVGY-PADRSVVLSASYEARKFGVKSAMPMAMA 79
Query: 577 KEKCPN 594
CP+
Sbjct: 80 ARICPS 85
>UniRef50_A5BB36 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 500
Score = 43.2 bits (97), Expect = 0.006
Identities = 25/60 (41%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Frame = +1
Query: 421 FYCQVEEKLNPELKGKPIAVVQYNPWKGGG-IIAVNYVARDLGVTRHMRGDEAKEKCPNI 597
F V + NPEL+ KP+AV N KG I + NY ARD GV + +AK CP++
Sbjct: 258 FLSPVVIRXNPELQDKPVAVCHSNNPKGTAEISSANYPARDYGVKAGIFVRDAKALCPHL 317
>UniRef50_Q8REB0 Cluster: DNA polymerase IV; n=3; Fusobacterium
nucleatum|Rep: DNA polymerase IV - Fusobacterium
nucleatum subsp. nucleatum
Length = 350
Score = 43.2 bits (97), Expect = 0.006
Identities = 24/70 (34%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGII-AVNYVARDLGVTRHMRG 567
R+++ DMD FY +E NP+LK KP+ V G I+ +Y AR + M+
Sbjct: 3 RIIMHYDMDAFYASIEINRNPKLKNKPLVV-------GENIVTTASYEARKYDIHSAMKV 55
Query: 568 DEAKEKCPNI 597
+AK CP +
Sbjct: 56 SDAKLLCPKL 65
>UniRef50_A3VPN3 Cluster: UMUC-like DNA-repair protein; n=4;
Alphaproteobacteria|Rep: UMUC-like DNA-repair protein -
Parvularcula bermudensis HTCC2503
Length = 418
Score = 42.7 bits (96), Expect = 0.008
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Frame = +1
Query: 406 IDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKG--GGIIAVNYVARDLGVTRHMRGDEAK 579
+D D F+ V ++ P L+GKP+ V+ ++ +IA + A+ GV MR EA+
Sbjct: 12 LDFDGFFASVMQQAMPHLRGKPVGVIPFDTASAQYTTVIACSKEAKARGVQNVMRVPEAR 71
Query: 580 EKCPNIQL 603
CP+I L
Sbjct: 72 AICPDIVL 79
>UniRef50_P75241 Cluster: Uncharacterized protein MG360 homolog;
n=3; Mycoplasma|Rep: Uncharacterized protein MG360
homolog - Mycoplasma pneumoniae
Length = 412
Score = 42.7 bits (96), Expect = 0.008
Identities = 24/61 (39%), Positives = 31/61 (50%)
Frame = +1
Query: 409 DMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGDEAKEKC 588
D D F+ VEE NPELK +P+ V N + NY+AR G+ M +A E C
Sbjct: 24 DFDAFFASVEEIENPELKNQPLIV--GNRTSRSVVSTCNYLARSYGIKSGMPIAKALELC 81
Query: 589 P 591
P
Sbjct: 82 P 82
>UniRef50_A4F5J4 Cluster: Putative uncharacterized protein; n=1;
uncultured bacterium|Rep: Putative uncharacterized
protein - uncultured bacterium
Length = 418
Score = 42.3 bits (95), Expect = 0.010
Identities = 28/77 (36%), Positives = 41/77 (53%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGD 570
R ++ DM+ FY VE L+P LK PIAV + G ++A NY A+ V
Sbjct: 10 RSILHCDMNNFYASVECMLDPALKKYPIAVCGSVEERHGIVLAKNYKAKAFDVKTGDAVW 69
Query: 571 EAKEKCPNIQLPSVPCH 621
+AK+KC ++ + VP H
Sbjct: 70 QAKQKCKDLVV--VPPH 84
>UniRef50_A4ECH9 Cluster: Putative uncharacterized protein; n=1;
Collinsella aerofaciens ATCC 25986|Rep: Putative
uncharacterized protein - Collinsella aerofaciens ATCC
25986
Length = 417
Score = 42.3 bits (95), Expect = 0.010
Identities = 24/65 (36%), Positives = 35/65 (53%)
Frame = +1
Query: 397 VVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGDEA 576
V L+D+D F+ VE +PE +GKP+ +V + G + +Y AR GV M EA
Sbjct: 26 VGLMDLDAFFASVEMLDHPEWRGKPL-IVGGDADSRGVVSTCSYEARRFGVHSAMPSAEA 84
Query: 577 KEKCP 591
+ CP
Sbjct: 85 RRLCP 89
>UniRef50_Q4D5I0 Cluster: DNA polymerase kappa, putative; n=4;
Trypanosoma cruzi|Rep: DNA polymerase kappa, putative -
Trypanosoma cruzi
Length = 604
Score = 42.3 bits (95), Expect = 0.010
Identities = 26/69 (37%), Positives = 34/69 (49%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGD 570
R V +DMD FY VE K NP L P+ V ++ + NYVAR GV M G
Sbjct: 157 RNYVHVDMDMFYAAVEMKKNPSLVDVPLGVGTFDM-----LSTTNYVARRYGVRSGMPGY 211
Query: 571 EAKEKCPNI 597
+ CP++
Sbjct: 212 IGVKLCPSL 220
>UniRef50_Q6BM10 Cluster: Similar to YALI0C01573g Yarrowia
lipolytica; n=1; Debaryomyces hansenii|Rep: Similar to
YALI0C01573g Yarrowia lipolytica - Debaryomyces hansenii
(Yeast) (Torulaspora hansenii)
Length = 770
Score = 42.3 bits (95), Expect = 0.010
Identities = 24/68 (35%), Positives = 36/68 (52%)
Frame = +1
Query: 394 VVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGDE 573
VV +D++ F+ QVE+ P+ Q W+ +IAV+Y AR G+ R
Sbjct: 44 VVAHVDLNAFFAQVEQVRLNLTADDPVVCAQ---WQS--LIAVSYAARKFGIGRMDTIQS 98
Query: 574 AKEKCPNI 597
A++KCPNI
Sbjct: 99 ARQKCPNI 106
>UniRef50_Q8YC76 Cluster: DNA polymerase IV; n=57;
Alphaproteobacteria|Rep: DNA polymerase IV - Brucella
melitensis
Length = 445
Score = 42.3 bits (95), Expect = 0.010
Identities = 24/63 (38%), Positives = 34/63 (53%)
Frame = +1
Query: 406 IDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGDEAKEK 585
+D D FY VE++ NP+L+ KP+ V K G + Y+AR GV M +A E
Sbjct: 52 VDCDAFYASVEKRDNPDLRDKPLIV---GGGKRGVVSTACYLARIHGVRSAMPMFKALEA 108
Query: 586 CPN 594
CP+
Sbjct: 109 CPD 111
>UniRef50_Q8EWQ4 Cluster: DNA-damage repair protein MucB; n=1;
Mycoplasma penetrans|Rep: DNA-damage repair protein MucB
- Mycoplasma penetrans
Length = 386
Score = 41.9 bits (94), Expect = 0.013
Identities = 28/67 (41%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Frame = +1
Query: 406 IDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIA-VNYVARDLGVTRHMRGDEAKE 582
IDMD F+ VE PE + P+AV G +IA NYVAR LGV M +AK+
Sbjct: 8 IDMDSFFASVELAERPEYEKLPLAV-------GHLVIASANYVARGLGVKSAMNIVDAKK 60
Query: 583 KCPNIQL 603
CP + +
Sbjct: 61 ICPQLTI 67
>UniRef50_A4INK7 Cluster: DNA polymerase IV; n=1; Geobacillus
thermodenitrificans NG80-2|Rep: DNA polymerase IV -
Geobacillus thermodenitrificans (strain NG80-2)
Length = 409
Score = 41.9 bits (94), Expect = 0.013
Identities = 21/70 (30%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVAR-DLGVTRHMRG 567
R++ +D + F+ E +P L+ KP+ V + G ++A +YVA+ G+ M
Sbjct: 10 RIIFHVDANSFFASCEIARDPSLQKKPVVVAGDPKERKGIVLAASYVAKQQFGIYTTMPL 69
Query: 568 DEAKEKCPNI 597
EAK++CP++
Sbjct: 70 WEAKKRCPSL 79
>UniRef50_Q75EE5 Cluster: AAR136Wp; n=1; Eremothecium gossypii|Rep:
AAR136Wp - Ashbya gossypii (Yeast) (Eremothecium
gossypii)
Length = 617
Score = 41.9 bits (94), Expect = 0.013
Identities = 27/86 (31%), Positives = 41/86 (47%)
Frame = +1
Query: 397 VVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGDEA 576
V ID++ F+ QVE+ K P+ VQ++ +IAV+Y R G+TR EA
Sbjct: 26 VAHIDVNAFFAQVEQVRCGYGKDDPVVCVQWS-----SVIAVSYACRKYGITRLDSVAEA 80
Query: 577 KEKCPNIQLPSVPCHRGKADISKYRD 654
+KCP + + D +Y D
Sbjct: 81 MKKCPTLIPIHTAVFKKGEDFWQYHD 106
>UniRef50_Q6C2B9 Cluster: Yarrowia lipolytica chromosome F of strain
CLIB122 of Yarrowia lipolytica; n=1; Yarrowia
lipolytica|Rep: Yarrowia lipolytica chromosome F of
strain CLIB122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 1219
Score = 41.9 bits (94), Expect = 0.013
Identities = 23/70 (32%), Positives = 35/70 (50%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGD 570
R+++ +D D F+ V P+L KP+AV + I + NY AR GV M
Sbjct: 517 RIIMHLDFDSFFVAVSTLDRPDLTRKPVAVGSGGS-RNADIASCNYEARKYGVKNGMWMS 575
Query: 571 EAKEKCPNIQ 600
A + CP++Q
Sbjct: 576 RALKLCPDLQ 585
>UniRef50_Q5KGG8 Cluster: Eta DNA polymerase, putative; n=2;
Filobasidiella neoformans|Rep: Eta DNA polymerase,
putative - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 690
Score = 41.9 bits (94), Expect = 0.013
Identities = 27/88 (30%), Positives = 42/88 (47%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGD 570
R + D+D Y Q E+ P+ Q W+ IIAVNY AR G+ R +
Sbjct: 35 RTIAHCDIDAAYAQFEQVRLGLPDDIPLICAQ---WQS--IIAVNYPARKYGIKRFTSIE 89
Query: 571 EAKEKCPNIQLPSVPCHRGKADISKYRD 654
+AK+ CP++++ V +R + Y D
Sbjct: 90 DAKKMCPHLRIQHVATYRNGESEAGYWD 117
>UniRef50_Q73P36 Cluster: DNA polymerase IV; n=1; Treponema
denticola|Rep: DNA polymerase IV - Treponema denticola
Length = 395
Score = 41.5 bits (93), Expect = 0.018
Identities = 23/68 (33%), Positives = 37/68 (54%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGD 570
+V +D+D F+ VE+ NPE GKP+ V + + G + +Y AR GV M
Sbjct: 5 KVFFHVDIDAFFASVEQLDNPEYMGKPVIVGGQS--ERGVVSTCSYEARKFGVHSAMPIL 62
Query: 571 EAKEKCPN 594
+A++ CP+
Sbjct: 63 QARKLCPS 70
>UniRef50_A1D906 Cluster: DNA-directed polymerase kappa, putative;
n=17; Pezizomycotina|Rep: DNA-directed polymerase kappa,
putative - Neosartorya fischeri (strain ATCC 1020 / DSM
3700 / NRRL 181)(Aspergillus fischerianus (strain ATCC
1020 / DSM 3700 / NRRL 181))
Length = 614
Score = 41.5 bits (93), Expect = 0.018
Identities = 27/68 (39%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Frame = +1
Query: 397 VVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAV-NYVARDLGVTRHMRGDE 573
VV +D D F+ VEE PELK P+AV G G++ NY AR G M
Sbjct: 115 VVHVDCDAFFAAVEELDRPELKTVPMAV-------GKGVLTTCNYEARKYGCRSGMASFV 167
Query: 574 AKEKCPNI 597
AK+ CP +
Sbjct: 168 AKKLCPQL 175
>UniRef50_Q0AX85 Cluster: DNA-directed DNA polymerase; n=1;
Syntrophomonas wolfei subsp. wolfei str. Goettingen|Rep:
DNA-directed DNA polymerase - Syntrophomonas wolfei
subsp. wolfei (strain Goettingen)
Length = 393
Score = 41.1 bits (92), Expect = 0.023
Identities = 22/61 (36%), Positives = 32/61 (52%)
Frame = +1
Query: 409 DMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGDEAKEKC 588
D+D F+ VE+ NP L+GKP+ VV + G + +Y AR G+ M +A C
Sbjct: 11 DLDAFFASVEQLDNPSLRGKPV-VVGGSMHSRGVVSTCSYEARKFGIRSAMPIAQAYRLC 69
Query: 589 P 591
P
Sbjct: 70 P 70
>UniRef50_A1SN18 Cluster: DNA-directed DNA polymerase; n=6;
Actinomycetales|Rep: DNA-directed DNA polymerase -
Nocardioides sp. (strain BAA-499 / JS614)
Length = 362
Score = 41.1 bits (92), Expect = 0.023
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = +1
Query: 397 VVLIDMDCFYCQVEEKLNPELKGKPIAV-VQYNPWKGGGIIAVNYVARDLGVTRHMRGDE 573
V+ +D+D F VE PEL G+P+ V + +P + G + +Y AR GV M
Sbjct: 10 VLHVDLDQFIAAVEVLRRPELAGRPVVVGGRGDPTERGVVATASYEARAFGVGSGMPLRV 69
Query: 574 AKEKCPN 594
A KCP+
Sbjct: 70 AARKCPD 76
>UniRef50_O48585 Cluster: T19K24.14 protein; n=1; Arabidopsis
thaliana|Rep: T19K24.14 protein - Arabidopsis thaliana
(Mouse-ear cress)
Length = 955
Score = 41.1 bits (92), Expect = 0.023
Identities = 29/68 (42%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = +1
Query: 415 DCFYCQVEEKLNPELKGKPIAVVQY-NPWKGGGIIAVNYVARDLGVTRHMRGDEAKEKCP 591
DCF+ V K EL KP+AV NP I + NY AR GV M AK+ CP
Sbjct: 329 DCFFVSVVIKNRLELHDKPVAVCHSDNPKGTAEISSANYPARAYGVKAGMFVRHAKDLCP 388
Query: 592 NIQLPSVP 615
QL VP
Sbjct: 389 --QLVIVP 394
>UniRef50_Q2HFL9 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 1141
Score = 41.1 bits (92), Expect = 0.023
Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVE-EKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRG 567
R ++ +D D F+C V + P+ + KP VV ++ G I + NY AR GV M
Sbjct: 311 RYIMHVDFDSFFCAVSLNRHAPDHRDKP-TVVAHSTGSGSEIASCNYPARKFGVKNGMWM 369
Query: 568 DEAKEKCPNIQL 603
A+E P+I++
Sbjct: 370 KRAQELYPDIKV 381
>UniRef50_Q09615 Cluster: Putative uncharacterized protein rev-1;
n=2; Caenorhabditis|Rep: Putative uncharacterized
protein rev-1 - Caenorhabditis elegans
Length = 1027
Score = 40.7 bits (91), Expect = 0.031
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Frame = +1
Query: 406 IDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAV---NYVARDLGVTRHMRGDEA 576
+D+DCF+ V + +LK K +A+ + V +Y ARD GV M +A
Sbjct: 443 VDLDCFFVSVAVRNRIDLKHKEVAITHSKGTISNSMSEVASCSYAARDCGVKNGMLVRDA 502
Query: 577 KEKCPNIQL 603
+KCP + L
Sbjct: 503 LQKCPQLTL 511
>UniRef50_Q6CIW8 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome F of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=1; Kluyveromyces lactis|Rep: Kluyveromyces
lactis strain NRRL Y-1140 chromosome F of strain NRRL Y-
1140 of Kluyveromyces lactis - Kluyveromyces lactis
(Yeast) (Candida sphaerica)
Length = 829
Score = 40.7 bits (91), Expect = 0.031
Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Frame = +1
Query: 406 IDMDCFYCQVEEKLNP--ELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGDEAK 579
ID DCF+ QV K++ ++ PIA+ + I + NYVAR GV M A
Sbjct: 219 IDFDCFFAQVSAKIDGKYDIHATPIAIS--HGINNSDISSCNYVARSFGVYNGMWVSSAL 276
Query: 580 EKCPNIQL 603
+ CP++++
Sbjct: 277 KLCPDLKI 284
>UniRef50_Q4AAV0 Cluster: DNA polymerase IV; n=5; Mycoplasma
hyopneumoniae|Rep: DNA polymerase IV - Mycoplasma
hyopneumoniae (strain J / ATCC 25934 / NCTC 10110)
Length = 385
Score = 40.3 bits (90), Expect = 0.041
Identities = 21/69 (30%), Positives = 39/69 (56%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGD 570
+++ ID+D F+ E KLNP+LKG+PI + + + ++V+ + G + +
Sbjct: 3 KIIAHIDIDNFFVSSELKLNPKLKGQPIVISRSEDF--AMAVSVSKEVKSKGFKISDKIN 60
Query: 571 EAKEKCPNI 597
E K+K PN+
Sbjct: 61 EIKKKIPNL 69
>UniRef50_A7D013 Cluster: DNA-directed DNA polymerase; n=1;
Opitutaceae bacterium TAV2|Rep: DNA-directed DNA
polymerase - Opitutaceae bacterium TAV2
Length = 416
Score = 40.3 bits (90), Expect = 0.041
Identities = 29/84 (34%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Frame = +1
Query: 397 VVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGDEA 576
+V +D D F+ VE L P+ +GK +AV + G I + +Y AR GV M A
Sbjct: 21 IVHLDADAFFVSVELALQPQYRGKKVAV---GGRERGIIASASYEARACGVYTPMPTARA 77
Query: 577 KEKCPNIQLPSVPCHRGK-ADISK 645
+ CP++ L +P H+G D+S+
Sbjct: 78 LKICPDLIL--LP-HKGSYGDVSR 98
>UniRef50_Q384G8 Cluster: DNA polymerase kappa, putative; n=11;
Trypanosoma brucei|Rep: DNA polymerase kappa, putative -
Trypanosoma brucei
Length = 572
Score = 40.3 bits (90), Expect = 0.041
Identities = 23/64 (35%), Positives = 33/64 (51%)
Frame = +1
Query: 406 IDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGDEAKEK 585
+DMD FY VE K +PE P+A+ + NY+AR G+ + M G A +
Sbjct: 138 LDMDMFYAAVEIKKHPEYATIPLAIGTMT-----RLQTANYIARGRGIRQGMPGFLALKI 192
Query: 586 CPNI 597
CPN+
Sbjct: 193 CPNL 196
>UniRef50_Q59Q77 Cluster: Putative uncharacterized protein REV1;
n=1; Candida albicans|Rep: Putative uncharacterized
protein REV1 - Candida albicans (Yeast)
Length = 1113
Score = 40.3 bits (90), Expect = 0.041
Identities = 22/71 (30%), Positives = 34/71 (47%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGD 570
+V++ ID DCF+ P+L + + K I + NYVAR GV M
Sbjct: 390 KVIMHIDFDCFFATASCLKRPDLDSSKHPIAVSHGGKTSDIASCNYVARKYGVKNGMWLM 449
Query: 571 EAKEKCPNIQL 603
+A + CP++ L
Sbjct: 450 QATKLCPDLIL 460
>UniRef50_Q4PF20 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 763
Score = 40.3 bits (90), Expect = 0.041
Identities = 23/71 (32%), Positives = 37/71 (52%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGD 570
RV++ +D+D FY K +P L G PI + Q + ++Y AR GV +
Sbjct: 59 RVIIALDLDAFYVSACRKRDPSLVGIPIGIQQ-----KALVATISYEARAAGVGKLDSIK 113
Query: 571 EAKEKCPNIQL 603
+A +KCP++ L
Sbjct: 114 DALKKCPDMIL 124
>UniRef50_A5DV91 Cluster: Putative uncharacterized protein; n=1;
Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
uncharacterized protein - Lodderomyces elongisporus
(Yeast) (Saccharomyces elongisporus)
Length = 731
Score = 40.3 bits (90), Expect = 0.041
Identities = 26/68 (38%), Positives = 38/68 (55%)
Frame = +1
Query: 394 VVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGDE 573
V+ L+D++ FY QVE + L + V Q W+ IIAV+Y AR G++R
Sbjct: 46 VIALVDLNAFYAQVE-CVRLGLSDEDPVVCQQ--WQS--IIAVSYAARKYGISRLDTVHS 100
Query: 574 AKEKCPNI 597
AK KCP++
Sbjct: 101 AKLKCPHL 108
>UniRef50_Q847G6 Cluster: Putative ultraviolet light resistance
protein B; n=1; Pseudomonas putida|Rep: Putative
ultraviolet light resistance protein B - Pseudomonas
putida
Length = 179
Score = 39.9 bits (89), Expect = 0.054
Identities = 20/52 (38%), Positives = 30/52 (57%)
Frame = +1
Query: 394 VVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGV 549
V L+D + FYC E PEL+GKP+ V+ + G I+A A++LG+
Sbjct: 9 VFSLVDANKFYCSCERIFRPELRGKPVVVLSNS---DGCIVACTNEAKELGL 57
>UniRef50_A3VTP3 Cluster: ImpB/MucB/SamB family protein; n=1;
Parvularcula bermudensis HTCC2503|Rep: ImpB/MucB/SamB
family protein - Parvularcula bermudensis HTCC2503
Length = 453
Score = 39.9 bits (89), Expect = 0.054
Identities = 19/64 (29%), Positives = 32/64 (50%)
Frame = +1
Query: 406 IDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGDEAKEK 585
ID + F+ + P L G+P+ + + + IAV+Y AR G+ R + EA+
Sbjct: 16 IDFNAFFAAAAQHDEPALAGRPVVITPHRS-EYSSAIAVSYEARPFGIRRGTKIREARHL 74
Query: 586 CPNI 597
CP +
Sbjct: 75 CPAV 78
>UniRef50_A1I8E9 Cluster: DNA-directed DNA polymerase; n=1;
Candidatus Desulfococcus oleovorans Hxd3|Rep:
DNA-directed DNA polymerase - Candidatus Desulfococcus
oleovorans Hxd3
Length = 384
Score = 39.9 bits (89), Expect = 0.054
Identities = 22/68 (32%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Frame = +1
Query: 394 VVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGII-AVNYVARDLGVTRHMRGD 570
+++ +DMD F+ VE+ +PE +G+ + V + + G G++ A +Y AR GV M
Sbjct: 1 MILHVDMDAFFASVEQLDHPEWRGRAVVVGRSS---GRGVVAAASYEARVFGVHSAMPMS 57
Query: 571 EAKEKCPN 594
A + CP+
Sbjct: 58 RALKLCPD 65
>UniRef50_Q015X2 Cluster: DNA polymerase iota/DNA damage inducible
protein; n=1; Ostreococcus tauri|Rep: DNA polymerase
iota/DNA damage inducible protein - Ostreococcus tauri
Length = 492
Score = 39.9 bits (89), Expect = 0.054
Identities = 23/56 (41%), Positives = 32/56 (57%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRH 558
R V+ +D D F+ QVE + L+G PIAV Q+ G I+ V + AR LG +H
Sbjct: 21 RCVLHVDADAFFAQVEALRDERLRGIPIAVRQH-----GDIVCVCHRARALGAKKH 71
>UniRef50_P34409 Cluster: DNA polymerase kappa; n=2;
Caenorhabditis|Rep: DNA polymerase kappa -
Caenorhabditis elegans
Length = 518
Score = 39.9 bits (89), Expect = 0.054
Identities = 24/71 (33%), Positives = 36/71 (50%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGD 570
R V IDMD ++ VE + NP L+ P+AV + NY+AR GV M G
Sbjct: 83 RDCVCIDMDAYFAAVEMRDNPALRTVPMAV-----GSSAMLSTSNYLARRFGVRAGMPGF 137
Query: 571 EAKEKCPNIQL 603
+ + CP++ +
Sbjct: 138 ISNKLCPSLTI 148
>UniRef50_UPI000050FCD1 Cluster: COG0389: Nucleotidyltransferase/DNA
polymerase involved in DNA repair; n=1; Brevibacterium
linens BL2|Rep: COG0389: Nucleotidyltransferase/DNA
polymerase involved in DNA repair - Brevibacterium
linens BL2
Length = 419
Score = 39.5 bits (88), Expect = 0.071
Identities = 22/62 (35%), Positives = 32/62 (51%)
Frame = +1
Query: 406 IDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGDEAKEK 585
+DMD F+ VE PEL G+P+ V + G +++ +Y AR+ GV M A
Sbjct: 28 LDMDSFFVSVELLSRPELVGRPVIVGGRS--GRGVVVSASYEAREFGVHAAMPMGRAMNL 85
Query: 586 CP 591
CP
Sbjct: 86 CP 87
>UniRef50_Q1QKL2 Cluster: DNA-directed DNA polymerase; n=6;
Alphaproteobacteria|Rep: DNA-directed DNA polymerase -
Nitrobacter hamburgensis (strain X14 / DSM 10229)
Length = 429
Score = 39.5 bits (88), Expect = 0.071
Identities = 23/63 (36%), Positives = 32/63 (50%)
Frame = +1
Query: 406 IDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGDEAKEK 585
ID D FY VE++ NP L KP+ + + G + A Y+AR GV M +A
Sbjct: 49 IDCDAFYATVEKRDNPALADKPVII---GGGRRGVVSAACYIARTYGVHSAMPMFKALAL 105
Query: 586 CPN 594
CP+
Sbjct: 106 CPS 108
>UniRef50_A6GF38 Cluster: DNA-directed DNA polymerase; n=1;
Plesiocystis pacifica SIR-1|Rep: DNA-directed DNA
polymerase - Plesiocystis pacifica SIR-1
Length = 409
Score = 39.5 bits (88), Expect = 0.071
Identities = 20/60 (33%), Positives = 32/60 (53%)
Frame = +1
Query: 412 MDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGDEAKEKCP 591
MD F+ +E++ +P L+GKP+ V + K G + A +Y AR G A+ +CP
Sbjct: 1 MDAFFASIEQRDDPRLRGKPVLV--GHAGKRGVVAAASYEARRFGCHSAQPMAVARRRCP 58
>UniRef50_Q6KI15 Cluster: DNA-damage repair protein; n=1; Mycoplasma
mobile|Rep: DNA-damage repair protein - Mycoplasma
mobile
Length = 411
Score = 39.1 bits (87), Expect = 0.094
Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGII-AVNYVARDLGVTRHMRG 567
+ + ID D F+ + PELKGK +AV + K I+ +++Y A+ G M+
Sbjct: 5 KTIFHIDADSFFVNSIITIRPELKGKEVAV---SSTKSSSIVSSLSYEAKQKGAKVPMQM 61
Query: 568 DEAKEKCPNI 597
E ++ CPNI
Sbjct: 62 REVRKYCPNI 71
>UniRef50_Q2SS65 Cluster: ImpB/MucB/SamB family protein; n=2;
Mycoplasma|Rep: ImpB/MucB/SamB family protein -
Mycoplasma capricolum subsp. capricolum (strain
California kid / ATCC27343 / NCTC 10154)
Length = 408
Score = 39.1 bits (87), Expect = 0.094
Identities = 23/69 (33%), Positives = 35/69 (50%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGD 570
+ ++ IDMD F+ + +PELK KPI + N + I A +Y AR + M
Sbjct: 4 KTIIHIDMDAFFASCMQLKHPELKNKPIVI--SNSFDKSIISAASYEARKYNIKAAMPLF 61
Query: 571 EAKEKCPNI 597
+AK+ P I
Sbjct: 62 KAKKLYPKI 70
>UniRef50_A4EK23 Cluster: DNA polymerase IV-AMBIGUITY; n=2;
Rhodobacteraceae|Rep: DNA polymerase IV-AMBIGUITY -
Roseobacter sp. CCS2
Length = 452
Score = 39.1 bits (87), Expect = 0.094
Identities = 20/64 (31%), Positives = 34/64 (53%)
Frame = +1
Query: 406 IDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGDEAKEK 585
+D D F+ E+ NP L+G+P+ VV + G IA++ A+ LGV R + +
Sbjct: 23 LDFDSFFATAEQHFNPALRGRPVGVVPLDS-PHTGCIAISREAKALGVKSMARIADTRRI 81
Query: 586 CPNI 597
P++
Sbjct: 82 VPDM 85
>UniRef50_A7AX68 Cluster: ImpB/MucB/SamB family protein; n=1;
Babesia bovis|Rep: ImpB/MucB/SamB family protein -
Babesia bovis
Length = 1246
Score = 39.1 bits (87), Expect = 0.094
Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Frame = +1
Query: 406 IDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGG--IIAVNYVARDLGVTRHMRGDEAK 579
IDMD F+ V K LK P+ + Y + I NY AR GV++ M +A
Sbjct: 435 IDMDAFFVSVAIKGKQHLKNMPLCI-SYGTGRNSASEIATCNYAARVYGVSKGMWVRDAV 493
Query: 580 EKCPNIQ 600
+ CP++Q
Sbjct: 494 QLCPSLQ 500
>UniRef50_Q9AK82 Cluster: DNA polymerase IV; n=8;
Actinomycetales|Rep: DNA polymerase IV - Streptomyces
coelicolor
Length = 479
Score = 39.1 bits (87), Expect = 0.094
Identities = 21/66 (31%), Positives = 33/66 (50%)
Frame = +1
Query: 397 VVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGDEA 576
++ +DMD F+ VE+ P L+GK + V P G + +Y AR GV M +A
Sbjct: 7 ILHLDMDAFFASVEQASKPSLRGKAVVVGGLGP--RGVVATCSYEARVFGVHSAMPMGQA 64
Query: 577 KEKCPN 594
+ P+
Sbjct: 65 RRLAPH 70
>UniRef50_UPI00006A0370 Cluster: DNA repair protein REV1 (EC
2.7.7.-) (Rev1-like terminal deoxycytidyl transferase)
(Alpha integrin-binding protein 80) (AIBP80).; n=1;
Xenopus tropicalis|Rep: DNA repair protein REV1 (EC
2.7.7.-) (Rev1-like terminal deoxycytidyl transferase)
(Alpha integrin-binding protein 80) (AIBP80). - Xenopus
tropicalis
Length = 1225
Score = 38.7 bits (86), Expect = 0.12
Identities = 14/28 (50%), Positives = 21/28 (75%)
Frame = +1
Query: 397 VVLIDMDCFYCQVEEKLNPELKGKPIAV 480
++ +DMDCF+ V + P+LKGKP+AV
Sbjct: 405 IIHVDMDCFFVSVAIRNRPDLKGKPVAV 432
>UniRef50_Q2RNH1 Cluster: DNA-directed DNA polymerase; n=1;
Rhodospirillum rubrum ATCC 11170|Rep: DNA-directed DNA
polymerase - Rhodospirillum rubrum (strain ATCC 11170 /
NCIB 8255)
Length = 421
Score = 38.7 bits (86), Expect = 0.12
Identities = 22/62 (35%), Positives = 30/62 (48%)
Frame = +1
Query: 406 IDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGDEAKEK 585
ID D FY VE++ NP L+ +P+ V +P G Y+AR G M + E
Sbjct: 41 IDCDAFYASVEKRDNPSLRDRPLIV--GHPGGRGVATTACYIARRFGARSAMPMFKCLEL 98
Query: 586 CP 591
CP
Sbjct: 99 CP 100
>UniRef50_A0K1P6 Cluster: DNA-directed DNA polymerase; n=3;
Arthrobacter|Rep: DNA-directed DNA polymerase -
Arthrobacter sp. (strain FB24)
Length = 437
Score = 38.7 bits (86), Expect = 0.12
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYN 492
R + L+D++CFY E +P L+G+P+ V+ N
Sbjct: 16 RQIALVDVNCFYASAERAFDPSLEGRPLVVLSNN 49
>UniRef50_Q6BS95 Cluster: Similar to CA1452|CaREV1 Candida albicans
CaREV1; n=1; Debaryomyces hansenii|Rep: Similar to
CA1452|CaREV1 Candida albicans CaREV1 - Debaryomyces
hansenii (Yeast) (Torulaspora hansenii)
Length = 1175
Score = 38.7 bits (86), Expect = 0.12
Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = +1
Query: 397 VVLIDMDCFYCQVEEKLNPEL--KGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGD 570
++ +D DCF+ +P L PIAV + I + NYVAR GV M
Sbjct: 458 ILHVDFDCFFATASCLNHPNLDINKDPIAVTHGG--RTSDIASCNYVARKFGVRNGMWSG 515
Query: 571 EAKEKCPNI 597
+AK+ CP +
Sbjct: 516 KAKQLCPEL 524
>UniRef50_Q6LIN6 Cluster: Putative uncharacterized protein T4291;
n=4; Vibrionaceae|Rep: Putative uncharacterized protein
T4291 - Photobacterium profundum (Photobacterium sp.
(strain SS9))
Length = 434
Score = 38.3 bits (85), Expect = 0.16
Identities = 19/55 (34%), Positives = 31/55 (56%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTR 555
+V L+D+ FYC E+ +P L +P+ V+ N G +AV+ A+ LG+ R
Sbjct: 11 QVWALVDVKSFYCSCEQLFDPSLVNQPVVVLSNN---DGCCVAVSEQAKALGIQR 62
>UniRef50_Q0EYF1 Cluster: Putative uncharacterized protein; n=1;
Mariprofundus ferrooxydans PV-1|Rep: Putative
uncharacterized protein - Mariprofundus ferrooxydans
PV-1
Length = 410
Score = 38.3 bits (85), Expect = 0.16
Identities = 21/63 (33%), Positives = 33/63 (52%)
Frame = +1
Query: 406 IDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGDEAKEK 585
+D D FY E +P+L+G+PI V+ + +IA +Y AR LG+ EA+
Sbjct: 13 VDCDAFYASCEAARHPKLRGRPICVLSNH---NAMVIAKSYDARALGIRTGTPVWEARRM 69
Query: 586 CPN 594
P+
Sbjct: 70 APH 72
>UniRef50_A3XQV7 Cluster: DNA polymerase IV; n=12;
Bacteroidetes|Rep: DNA polymerase IV - Leeuwenhoekiella
blandensis MED217
Length = 406
Score = 38.3 bits (85), Expect = 0.16
Identities = 22/67 (32%), Positives = 33/67 (49%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGD 570
R ++ +D+D F+ E +LN L GKP+ V G + A +Y R GV M
Sbjct: 3 RNILHLDLDTFFVSCERRLNSSLIGKPVIV--GGTGDRGVVSAASYECRAFGVHSGMAMR 60
Query: 571 EAKEKCP 591
A++ CP
Sbjct: 61 MARQLCP 67
>UniRef50_Q9W0P2 Cluster: CG12189-PA; n=3; Sophophora|Rep:
CG12189-PA - Drosophila melanogaster (Fruit fly)
Length = 995
Score = 38.3 bits (85), Expect = 0.16
Identities = 17/30 (56%), Positives = 21/30 (70%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAV 480
R V+ IDMDCF+ V + PEL+G PIAV
Sbjct: 273 RYVMHIDMDCFFVSVGLRTRPELRGLPIAV 302
>UniRef50_UPI0000D56635 Cluster: PREDICTED: similar to CG12189-PA;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
CG12189-PA - Tribolium castaneum
Length = 825
Score = 37.9 bits (84), Expect = 0.22
Identities = 16/29 (55%), Positives = 21/29 (72%)
Frame = +1
Query: 394 VVVLIDMDCFYCQVEEKLNPELKGKPIAV 480
VV+ IDMDCF+ V + PEL+G P+AV
Sbjct: 209 VVMHIDMDCFFVSVGLRTRPELRGLPVAV 237
>UniRef50_Q4Q8C5 Cluster: DNA polymerase kappa, putative; n=3;
Leishmania|Rep: DNA polymerase kappa, putative -
Leishmania major
Length = 751
Score = 37.9 bits (84), Expect = 0.22
Identities = 26/74 (35%), Positives = 34/74 (45%)
Frame = +1
Query: 394 VVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGDE 573
+ V +DMD F+ VE K NP+ P+ + + + NYVAR GV M G
Sbjct: 232 IYVHMDMDMFFAAVEMKKNPQYAEVPLGIGSMSM-----LSTTNYVARKYGVQSGMPGFI 286
Query: 574 AKEKCPNIQLPSVP 615
CP QL VP
Sbjct: 287 GMRLCP--QLVIVP 298
>UniRef50_Q4S0P1 Cluster: Chromosome 2 SCAF14781, whole genome
shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 2
SCAF14781, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 1313
Score = 37.5 bits (83), Expect = 0.29
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = +1
Query: 406 IDMDCFYCQVEEKLNPELKGKPIAV 480
+DMDCF+ V + P+LKGKP+AV
Sbjct: 512 VDMDCFFVSVAIRNRPDLKGKPVAV 536
>UniRef50_Q6F1D8 Cluster: DNA polymerase IV; n=1; Mesoplasma
florum|Rep: DNA polymerase IV - Mesoplasma florum
(Acholeplasma florum)
Length = 370
Score = 37.5 bits (83), Expect = 0.29
Identities = 21/64 (32%), Positives = 34/64 (53%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGD 570
+V++ +DMD F+ E+ + LK KP+ V + N I+A +Y AR G+
Sbjct: 4 KVILHLDMDAFFASCEQAHDKTLKNKPVVVARNN--DRSIIVAASYDARKYGIKAGTPIF 61
Query: 571 EAKE 582
EAK+
Sbjct: 62 EAKQ 65
>UniRef50_Q31B23 Cluster: DNA-directed DNA polymerase; n=5;
Prochlorococcus marinus|Rep: DNA-directed DNA polymerase
- Prochlorococcus marinus (strain MIT 9312)
Length = 428
Score = 37.5 bits (83), Expect = 0.29
Identities = 22/63 (34%), Positives = 33/63 (52%)
Frame = +1
Query: 397 VVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGDEA 576
+ LID + FY E+ +NP L+ KP+ ++ N G IIA + AR L + +
Sbjct: 9 IALIDANNFYASCEQTINPHLRNKPVVILSNN---DGCIIARSPEARALKIKMGTPYFKV 65
Query: 577 KEK 585
KEK
Sbjct: 66 KEK 68
>UniRef50_A7MTX6 Cluster: Putative uncharacterized protein; n=1;
Vibrio harveyi ATCC BAA-1116|Rep: Putative
uncharacterized protein - Vibrio harveyi ATCC BAA-1116
Length = 86
Score = 37.5 bits (83), Expect = 0.29
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +1
Query: 403 LIDMDCFYCQVEEKLNPELKGKPIAVVQYN 492
L+D + FYC E+ PE +GKPI V+ N
Sbjct: 4 LVDANAFYCSAEQVFRPEWRGKPIVVLSNN 33
>UniRef50_Q0PGJ8 Cluster: AIBO80; n=1; Bos taurus|Rep: AIBO80 - Bos
taurus (Bovine)
Length = 285
Score = 37.5 bits (83), Expect = 0.29
Identities = 14/28 (50%), Positives = 21/28 (75%)
Frame = +1
Query: 397 VVLIDMDCFYCQVEEKLNPELKGKPIAV 480
++ +DMDCF+ V + P+LKGKP+AV
Sbjct: 77 IMHVDMDCFFVSVGIRNRPDLKGKPVAV 104
>UniRef50_A2FMN4 Cluster: ImpB/MucB/SamB family protein; n=1;
Trichomonas vaginalis G3|Rep: ImpB/MucB/SamB family
protein - Trichomonas vaginalis G3
Length = 519
Score = 37.5 bits (83), Expect = 0.29
Identities = 24/65 (36%), Positives = 32/65 (49%)
Frame = +1
Query: 409 DMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGDEAKEKC 588
D+D F+ VE L+P LKG AV K G I +Y AR GV M A + C
Sbjct: 95 DLDSFFASVEALLDPSLKGTAFAV--GGSVKRGIISTSSYEARKYGVRSGMAVFVAMKLC 152
Query: 589 PNIQL 603
P++ +
Sbjct: 153 PHLNV 157
>UniRef50_A5E4H3 Cluster: Putative uncharacterized protein; n=1;
Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
uncharacterized protein - Lodderomyces elongisporus
(Yeast) (Saccharomyces elongisporus)
Length = 1301
Score = 37.5 bits (83), Expect = 0.29
Identities = 21/71 (29%), Positives = 33/71 (46%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGD 570
R+++ ID DCF+ +P L + + + + + NYVAR GV M
Sbjct: 535 RIIMHIDFDCFFATASCLKHPNLDIDRDPIAVGHGGETSDVASCNYVARKYGVRNGMWFR 594
Query: 571 EAKEKCPNIQL 603
A+ CPN+ L
Sbjct: 595 LAQALCPNLTL 605
>UniRef50_Q9UBZ9 Cluster: DNA repair protein REV1; n=32;
Euteleostomi|Rep: DNA repair protein REV1 - Homo sapiens
(Human)
Length = 1251
Score = 37.5 bits (83), Expect = 0.29
Identities = 14/28 (50%), Positives = 21/28 (75%)
Frame = +1
Query: 397 VVLIDMDCFYCQVEEKLNPELKGKPIAV 480
++ +DMDCF+ V + P+LKGKP+AV
Sbjct: 419 IMHVDMDCFFVSVGIRNRPDLKGKPVAV 446
>UniRef50_A6ET82 Cluster: Nucleotidyltransferase/DNA polymerase
involved in DNA repair; n=4; Bacteroidetes|Rep:
Nucleotidyltransferase/DNA polymerase involved in DNA
repair - unidentified eubacterium SCB49
Length = 421
Score = 37.1 bits (82), Expect = 0.38
Identities = 19/50 (38%), Positives = 28/50 (56%)
Frame = +1
Query: 394 VVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDL 543
++ L+D + FY E+ P+L GKP+ V+ N G IIA N A+ L
Sbjct: 1 MIALVDCNSFYASCEQVFRPDLWGKPVVVLSNN---DGCIIAANREAKAL 47
>UniRef50_A5GPY7 Cluster: Bacterial UmuC protein homolog; n=15;
Cyanobacteria|Rep: Bacterial UmuC protein homolog -
Synechococcus sp. (strain RCC307)
Length = 426
Score = 37.1 bits (82), Expect = 0.38
Identities = 19/51 (37%), Positives = 30/51 (58%)
Frame = +1
Query: 397 VVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGV 549
+ LID + FY E+ +P L+G+P+ V+ N G I+A + AR LG+
Sbjct: 5 LALIDCNNFYASCEQLFDPALQGRPVVVLSNN---DGCIVARSREARQLGI 52
>UniRef50_P63986 Cluster: DNA polymerase IV 1; n=26;
Actinomycetales|Rep: DNA polymerase IV 1 - Mycobacterium
bovis
Length = 468
Score = 37.1 bits (82), Expect = 0.38
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIA-VNYVARDLGVTRHMRG 567
R V+ +DMD F+ VE+ P L+G+P+ V G G++A +Y AR G M
Sbjct: 4 RWVLHLDMDAFFASVEQLTRPTLRGRPVLV---GGLGGRGVVAGASYEARAYGARSAMPM 60
Query: 568 DEAK 579
+A+
Sbjct: 61 HQAR 64
>UniRef50_UPI00004984F2 Cluster: deoxycytidyl transferase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: deoxycytidyl
transferase - Entamoeba histolytica HM-1:IMSS
Length = 708
Score = 36.7 bits (81), Expect = 0.50
Identities = 19/67 (28%), Positives = 33/67 (49%)
Frame = +1
Query: 397 VVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGDEA 576
++ +D+D F+ V + EL+GKP+ V + + + NY AR G+ M +A
Sbjct: 172 IMHVDIDSFFASVTISKHTELQGKPVVV--SHGGNNADVSSCNYEARKYGIKNGMWLKQA 229
Query: 577 KEKCPNI 597
CP +
Sbjct: 230 YNLCPQL 236
>UniRef50_Q4FMY4 Cluster: UmuC; n=5; Bacteria|Rep: UmuC -
Pelagibacter ubique
Length = 426
Score = 36.7 bits (81), Expect = 0.50
Identities = 21/62 (33%), Positives = 33/62 (53%)
Frame = +1
Query: 397 VVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGDEA 576
+ L+D + FY E NP+++ KP+ V+ N G IIA + A+ LG+ +A
Sbjct: 10 IALVDCNSFYVSCERLFNPKIRNKPVVVLSNN---DGCIIARSNEAKFLGIKMGEPYFKA 66
Query: 577 KE 582
KE
Sbjct: 67 KE 68
>UniRef50_A6GT02 Cluster: UMUC-like DNA-repair protein; n=1;
Limnobacter sp. MED105|Rep: UMUC-like DNA-repair protein
- Limnobacter sp. MED105
Length = 397
Score = 36.7 bits (81), Expect = 0.50
Identities = 29/89 (32%), Positives = 45/89 (50%), Gaps = 16/89 (17%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAV-----VQYNP---------WKGGGII-AVN 525
R++ +DMD FY E NP L+G P+AV +Q P ++G G++ N
Sbjct: 11 RIIAHLDMDAFYANAELVRNPALRGLPVAVGGRRGMQPLPGQQFPTLAQYEGRGVLTTAN 70
Query: 526 YVARDLGVTRHMRGDEAKEKCPN-IQLPS 609
Y AR LG+ M +A + P+ + LP+
Sbjct: 71 YEARALGLHSAMPTMKAAKLAPHAVLLPA 99
>UniRef50_A3TNV0 Cluster: Putative uncharacterized protein; n=1;
Janibacter sp. HTCC2649|Rep: Putative uncharacterized
protein - Janibacter sp. HTCC2649
Length = 347
Score = 36.7 bits (81), Expect = 0.50
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIA-VNYVARDLGVTRHMRG 567
RV++ D D F+ VE++ +P L+G+P+ V G ++A +Y AR LGV M
Sbjct: 7 RVLIHADADAFFASVEQRDHPHLRGRPMVV-------GPQVVACASYEARALGVHAGMPL 59
Query: 568 DEAKEKCPNI 597
+A + P +
Sbjct: 60 FQAVRRWPEL 69
>UniRef50_A4RD58 Cluster: Putative uncharacterized protein; n=1;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 617
Score = 36.7 bits (81), Expect = 0.50
Identities = 26/77 (33%), Positives = 39/77 (50%)
Frame = +1
Query: 433 VEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGDEAKEKCPNIQLPSV 612
V E P LK P+ + Q + + NYVAR GV + MR EA++ CP++ L
Sbjct: 61 VVENKEPSLKSLPVGIKQKSI-----LATCNYVARRRGVKKLMRISEARDICPDLVLVD- 114
Query: 613 PCHRGKADISKYRDAGK 663
G+ D++ +RD K
Sbjct: 115 ----GE-DLTPFRDTSK 126
>UniRef50_Q64V68 Cluster: SOS mutagenesis and repair protein UmuC
homolog; n=3; Bacteroidetes|Rep: SOS mutagenesis and
repair protein UmuC homolog - Bacteroides fragilis
Length = 427
Score = 36.3 bits (80), Expect = 0.66
Identities = 20/49 (40%), Positives = 27/49 (55%)
Frame = +1
Query: 403 LIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGV 549
L+D + FY E NP L GKPI V+ N G +IA + A+ LG+
Sbjct: 4 LMDCNNFYASCERVFNPALNGKPIVVLSNN---DGCVIARSNEAKTLGI 49
>UniRef50_Q6R286 Cluster: SOS inducible DNA polymerase; n=3;
Enterobacteriaceae|Rep: SOS inducible DNA polymerase -
Escherichia coli
Length = 395
Score = 36.3 bits (80), Expect = 0.66
Identities = 20/49 (40%), Positives = 27/49 (55%)
Frame = +1
Query: 403 LIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGV 549
L D++ FY E P+L GKP+ V+ N G +IA N A+ LGV
Sbjct: 4 LCDVNAFYASCETVFRPDLWGKPVVVLSNN---DGCVIARNAEAKALGV 49
>UniRef50_Q5KPS9 Cluster: Putative uncharacterized protein; n=2;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 1246
Score = 36.3 bits (80), Expect = 0.66
Identities = 24/68 (35%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGG----IIAVNYVARDLGVTRH 558
RV+ +D D F+ P LKGKP VV ++ +G G I + +Y AR+ GV
Sbjct: 452 RVIFHVDFDAFFVSCGLATRPHLKGKP-TVVCHSSGRGVGSTSEIASCSYEAREKGVRNG 510
Query: 559 MRGDEAKE 582
M A+E
Sbjct: 511 MSLGRARE 518
>UniRef50_Q46L62 Cluster: DNA-directed DNA polymerase; n=2;
Prochlorococcus marinus|Rep: DNA-directed DNA polymerase
- Prochlorococcus marinus (strain NATL2A)
Length = 425
Score = 35.9 bits (79), Expect = 0.88
Identities = 19/53 (35%), Positives = 32/53 (60%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGV 549
+V++ ID + FY E+ ++P +KGK + V+ N G IIA + AR +G+
Sbjct: 3 KVILQIDGNNFYASCEQMIDPSIKGKGLVVLSNN---DGCIIARSSEARRMGI 52
>UniRef50_Q2RYM0 Cluster: UmuC protein; n=2; Salinibacter ruber DSM
13855|Rep: UmuC protein - Salinibacter ruber (strain DSM
13855)
Length = 432
Score = 35.9 bits (79), Expect = 0.88
Identities = 19/52 (36%), Positives = 29/52 (55%)
Frame = +1
Query: 394 VVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGV 549
V LID + FY E +P L+G+P+AV+ N G +IA + ++ GV
Sbjct: 4 VFALIDCENFYVSCERVFDPSLRGRPVAVLSNN---DGCVIARSEEVKEAGV 52
>UniRef50_Q2P505 Cluster: Polymerase V subunit; n=4;
Xanthomonas|Rep: Polymerase V subunit - Xanthomonas
oryzae pv. oryzae (strain MAFF 311018)
Length = 428
Score = 35.5 bits (78), Expect = 1.2
Identities = 21/50 (42%), Positives = 28/50 (56%)
Frame = +1
Query: 403 LIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVT 552
LID + FY E PEL+G+P+ V+ N G IA + A+ LGVT
Sbjct: 4 LIDGNNFYASCERVFQPELRGRPLVVLSNN---DGCAIARSDEAKALGVT 50
>UniRef50_Q1NNX6 Cluster: Putative uncharacterized protein; n=1;
delta proteobacterium MLMS-1|Rep: Putative
uncharacterized protein - delta proteobacterium MLMS-1
Length = 139
Score = 35.5 bits (78), Expect = 1.2
Identities = 18/49 (36%), Positives = 29/49 (59%)
Frame = +1
Query: 403 LIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGV 549
L+D + FY E +P L+G+P+ V+ N GG+IA + A+ LG+
Sbjct: 23 LLDCNSFYVSCERLFDPGLEGQPVVVLSNN---DGGVIARSNEAKALGL 68
>UniRef50_P12689 Cluster: DNA repair protein REV1; n=2;
Saccharomyces cerevisiae|Rep: DNA repair protein REV1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 985
Score = 35.5 bits (78), Expect = 1.2
Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 7/81 (8%)
Frame = +1
Query: 394 VVVLIDMDCFY------CQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTR 555
++ ID DCF+ C+ + K PI V K I + NYVAR G+
Sbjct: 357 IIFHIDFDCFFATVAYLCRSSSFSACDFKRDPIVVCHGT--KNSDIASCNYVARSYGIKN 414
Query: 556 HMRGDEAKEKCPN-IQLPSVP 615
M +A++ PN I+L S+P
Sbjct: 415 GMWVSQAEKMLPNGIKLISLP 435
>UniRef50_P63988 Cluster: DNA polymerase IV 2; n=16;
Corynebacterineae|Rep: DNA polymerase IV 2 -
Mycobacterium bovis
Length = 346
Score = 35.5 bits (78), Expect = 1.2
Identities = 30/96 (31%), Positives = 44/96 (45%), Gaps = 6/96 (6%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAV-VQYNPWKGGGII-AVNYVARDLGVTRHMR 564
R ++ +D+D F VE +PEL G P+ V +P + ++ +Y AR GV M
Sbjct: 7 RWILHVDLDQFLASVELLRHPELAGLPVIVGGNGDPTEPRKVVTCASYEARAYGVRAGMP 66
Query: 565 GDEAKEKCPNIQ-LPSVPCHRGKAD---ISKYRDAG 660
A +CP LPS P A ++ RD G
Sbjct: 67 LRTAARRCPEATFLPSNPAAYNAASEEVVALLRDLG 102
>UniRef50_UPI0000E87FBE Cluster: DNA repair protein; n=1;
Methylophilales bacterium HTCC2181|Rep: DNA repair
protein - Methylophilales bacterium HTCC2181
Length = 419
Score = 35.1 bits (77), Expect = 1.5
Identities = 18/52 (34%), Positives = 30/52 (57%)
Frame = +1
Query: 394 VVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGV 549
++ L+D++ FY E NP L KP+ V+ N G II+ + A++LG+
Sbjct: 1 MIALVDVNNFYVSCERLFNPYLINKPVVVLSNN---DGCIISRSQEAKNLGI 49
>UniRef50_Q5FNE8 Cluster: SOS (Error prone) mutagenesis protein
UmuC; n=2; Acetobacteraceae|Rep: SOS (Error prone)
mutagenesis protein UmuC - Gluconobacter oxydans
(Gluconobacter suboxydans)
Length = 420
Score = 35.1 bits (77), Expect = 1.5
Identities = 20/53 (37%), Positives = 27/53 (50%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGV 549
RV LID + FYC + P LK +P+ V+ N G IA A+ LG+
Sbjct: 3 RVFGLIDGNSFYCSCQRAFEPRLKRRPVVVLSNN---DGCAIARTREAKALGI 52
>UniRef50_Q0ACU7 Cluster: DNA-directed DNA polymerase; n=2;
Nitrosomonas eutropha C91|Rep: DNA-directed DNA
polymerase - Nitrosomonas eutropha (strain C71)
Length = 431
Score = 35.1 bits (77), Expect = 1.5
Identities = 20/53 (37%), Positives = 29/53 (54%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGV 549
++ LID + FYC E P+L+ KP+ V+ N G IA + A+ LGV
Sbjct: 2 KLFALIDGNNFYCSCERVFQPQLQNKPLIVLSNN---DGCAIARSEQAKALGV 51
>UniRef50_A0Y5N4 Cluster: DNA polymerase IV, devoid of proofreading,
damage-inducible protein P; n=1; Alteromonadales
bacterium TW-7|Rep: DNA polymerase IV, devoid of
proofreading, damage-inducible protein P -
Alteromonadales bacterium TW-7
Length = 333
Score = 35.1 bits (77), Expect = 1.5
Identities = 17/50 (34%), Positives = 28/50 (56%)
Frame = +1
Query: 448 NPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGDEAKEKCPNI 597
NP+L P+A+ + + G + NY+AR+ GV M AK+ CP++
Sbjct: 4 NPKLANVPLAIGGNS--RRGVLSTANYIAREFGVRSAMSNYHAKQLCPDL 51
>UniRef50_P07375 Cluster: Protein mucB; n=124; root|Rep: Protein
mucB - Escherichia coli
Length = 420
Score = 35.1 bits (77), Expect = 1.5
Identities = 17/49 (34%), Positives = 28/49 (57%)
Frame = +1
Query: 403 LIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGV 549
LID++ Y E+ P+L + +AV+ N G I+A NY+A+ G+
Sbjct: 4 LIDVNGMYASCEQAFRPDLANRAVAVLSNN---DGNIVARNYLAKKAGL 49
>UniRef50_UPI0000F1EB8F Cluster: PREDICTED: similar to Rev1S; n=3;
Danio rerio|Rep: PREDICTED: similar to Rev1S - Danio
rerio
Length = 1268
Score = 34.7 bits (76), Expect = 2.0
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = +1
Query: 397 VVLIDMDCFYCQVEEKLNPELKGKPIAV 480
V+ +DMDCF+ V + P+L GKP+AV
Sbjct: 452 VLHVDMDCFFVSVGIRHRPDLIGKPVAV 479
>UniRef50_A6C5Y5 Cluster: UMUC-like DNA-repair protein; n=1;
Planctomyces maris DSM 8797|Rep: UMUC-like DNA-repair
protein - Planctomyces maris DSM 8797
Length = 405
Score = 34.7 bits (76), Expect = 2.0
Identities = 22/63 (34%), Positives = 31/63 (49%)
Frame = +1
Query: 406 IDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGDEAKEK 585
ID DCFY E + L+G P V+ +G +IA +Y + GV EAK+
Sbjct: 9 IDSDCFYVSCERIRSYSLRGVPCGVLGN---QGACVIAKSYELKAYGVKTGHPIWEAKKL 65
Query: 586 CPN 594
CP+
Sbjct: 66 CPH 68
>UniRef50_A3VP13 Cluster: DNA polymerase IV; n=1; Parvularcula
bermudensis HTCC2503|Rep: DNA polymerase IV -
Parvularcula bermudensis HTCC2503
Length = 422
Score = 34.7 bits (76), Expect = 2.0
Identities = 19/62 (30%), Positives = 30/62 (48%)
Frame = +1
Query: 406 IDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGDEAKEK 585
+D D F+ +E++ +P L KP+ V G + Y+AR G+ M +AK
Sbjct: 38 VDCDAFFAAIEKRDDPSLVDKPVLV---GGGHRGVVSTCCYIARSYGIHSAMPMFKAKAL 94
Query: 586 CP 591
CP
Sbjct: 95 CP 96
>UniRef50_Q8VMP6 Cluster: RuvB protein; n=4; Pseudomonas putida|Rep:
RuvB protein - Pseudomonas putida
Length = 402
Score = 34.3 bits (75), Expect = 2.7
Identities = 17/49 (34%), Positives = 28/49 (57%)
Frame = +1
Query: 403 LIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGV 549
L+D++ FYC E PEL+ +P+ V+ + G I+A A+ LG+
Sbjct: 12 LVDVNSFYCSCERIFRPELRHRPVVVLSNS---DGCIVARTNEAKALGL 57
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 603,196,056
Number of Sequences: 1657284
Number of extensions: 11016542
Number of successful extensions: 20381
Number of sequences better than 10.0: 262
Number of HSP's better than 10.0 without gapping: 19558
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20064
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 50826451017
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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