Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov11f02
(665 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC015742-1|AAH15742.1| 414|Homo sapiens POLH protein protein. 119 8e-27
AY388614-1|AAQ81300.1| 713|Homo sapiens polymerase (DNA directe... 119 8e-27
AL355802-25|CAI42642.1| 713|Homo sapiens polymerase (DNA direct... 119 8e-27
AL355802-24|CAI42641.1| 414|Homo sapiens polymerase (DNA direct... 119 8e-27
AL353602-7|CAI12787.1| 713|Homo sapiens polymerase (DNA directe... 119 8e-27
AL353602-6|CAI12786.1| 414|Homo sapiens polymerase (DNA directe... 119 8e-27
AF158185-1|AAD43810.1| 713|Homo sapiens xeroderma pigmentosum v... 119 8e-27
AB038008-1|BAB18601.1| 713|Homo sapiens DNA polymerase eta prot... 119 8e-27
AB024313-1|BAA81666.1| 713|Homo sapiens DNA polymerase eta prot... 119 8e-27
BC142730-1|AAI42731.1| 705|Homo sapiens POLI protein protein. 68 3e-11
BC142674-1|AAI42675.1| 705|Homo sapiens POLI protein protein. 68 3e-11
BC032662-1|AAH32662.1| 715|Homo sapiens polymerase (DNA directe... 68 3e-11
AY094607-1|AAM11872.1| 715|Homo sapiens polymerase (DNA directe... 68 3e-11
AL136670-1|CAB66605.1| 715|Homo sapiens hypothetical protein pr... 68 3e-11
AF245438-1|AAF63383.1| 715|Homo sapiens DNA polymerase iota pro... 68 3e-11
AF140501-1|AAD50381.1| 715|Homo sapiens DNA polymerase iota pro... 68 3e-11
BC050718-1|AAH50718.1| 472|Homo sapiens POLK protein protein. 52 2e-06
BC014955-1|AAH14955.1| 313|Homo sapiens POLK protein protein. 52 2e-06
AY769932-1|AAV80830.1| 461|Homo sapiens polymerase kappa isofor... 52 2e-06
AY769931-1|AAV80829.1| 371|Homo sapiens polymerase kappa isofor... 52 2e-06
AY769930-1|AAV80828.1| 489|Homo sapiens polymerase kappa isofor... 52 2e-06
AY769929-1|AAV80827.1| 780|Homo sapiens polymerase kappa isofor... 52 2e-06
AY273797-1|AAP12648.1| 870|Homo sapiens polymerase (DNA directe... 52 2e-06
AK091659-1|BAC03714.1| 372|Homo sapiens protein ( Homo sapiens ... 52 2e-06
AF315602-1|AAN15780.1| 672|Homo sapiens DNA polymerase kappa pr... 52 2e-06
AF194973-1|AAF23270.1| 870|Homo sapiens DINP protein protein. 52 2e-06
AF163570-1|AAF02540.1| 870|Homo sapiens DINB protein protein. 52 2e-06
AB209291-1|BAD92528.1| 790|Homo sapiens polymerase (DNA directe... 52 2e-06
AB036935-1|BAB58976.1| 146|Homo sapiens DINB1 protein. 52 2e-06
AB027564-1|BAA86943.1| 870|Homo sapiens DINB1 protein. 52 2e-06
AB036934-2|BAB58975.1| 136|Homo sapiens DINB1 protein. 41 0.003
BC130411-1|AAI30412.1| 1250|Homo sapiens REV1 homolog (S. cerevi... 38 0.043
BC037734-1|AAH37734.1| 1114|Homo sapiens REV1 protein protein. 38 0.043
AF357886-1|AAK43708.1| 1251|Homo sapiens terminal deoxycytidyl t... 38 0.043
AF206019-1|AAF18986.1| 1251|Homo sapiens REV1 protein protein. 38 0.043
AF151538-1|AAF06731.1| 1251|Homo sapiens deoxycytidyl transferas... 38 0.043
AC018690-2|AAY24314.1| 1251|Homo sapiens unknown protein. 38 0.043
AB047646-1|BAB21441.1| 1250|Homo sapiens Rev1S protein. 38 0.043
AL355802-26|CAI42643.1| 72|Homo sapiens polymerase (DNA direct... 37 0.056
AJ131720-1|CAB38231.1| 774|Homo sapiens alpha integrin binding ... 30 6.5
>BC015742-1|AAH15742.1| 414|Homo sapiens POLH protein protein.
Length = 414
Score = 119 bits (287), Expect = 8e-27
Identities = 54/89 (60%), Positives = 68/89 (76%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGD 570
RVV L+DMDCF+ QVE++ NP L+ KP AVVQY WKGGGIIAV+Y AR GVTR M D
Sbjct: 7 RVVALVDMDCFFVQVEQRQNPHLRNKPCAVVQYKSWKGGGIIAVSYEARAFGVTRSMWAD 66
Query: 571 EAKEKCPNIQLPSVPCHRGKADISKYRDA 657
+AK+ CP++ L V RGKA+++KYR+A
Sbjct: 67 DAKKLCPDLLLAQVRESRGKANLTKYREA 95
>AY388614-1|AAQ81300.1| 713|Homo sapiens polymerase (DNA directed),
eta protein.
Length = 713
Score = 119 bits (287), Expect = 8e-27
Identities = 54/89 (60%), Positives = 68/89 (76%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGD 570
RVV L+DMDCF+ QVE++ NP L+ KP AVVQY WKGGGIIAV+Y AR GVTR M D
Sbjct: 7 RVVALVDMDCFFVQVEQRQNPHLRNKPCAVVQYKSWKGGGIIAVSYEARAFGVTRSMWAD 66
Query: 571 EAKEKCPNIQLPSVPCHRGKADISKYRDA 657
+AK+ CP++ L V RGKA+++KYR+A
Sbjct: 67 DAKKLCPDLLLAQVRESRGKANLTKYREA 95
>AL355802-25|CAI42642.1| 713|Homo sapiens polymerase (DNA
directed), eta protein.
Length = 713
Score = 119 bits (287), Expect = 8e-27
Identities = 54/89 (60%), Positives = 68/89 (76%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGD 570
RVV L+DMDCF+ QVE++ NP L+ KP AVVQY WKGGGIIAV+Y AR GVTR M D
Sbjct: 7 RVVALVDMDCFFVQVEQRQNPHLRNKPCAVVQYKSWKGGGIIAVSYEARAFGVTRSMWAD 66
Query: 571 EAKEKCPNIQLPSVPCHRGKADISKYRDA 657
+AK+ CP++ L V RGKA+++KYR+A
Sbjct: 67 DAKKLCPDLLLAQVRESRGKANLTKYREA 95
>AL355802-24|CAI42641.1| 414|Homo sapiens polymerase (DNA
directed), eta protein.
Length = 414
Score = 119 bits (287), Expect = 8e-27
Identities = 54/89 (60%), Positives = 68/89 (76%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGD 570
RVV L+DMDCF+ QVE++ NP L+ KP AVVQY WKGGGIIAV+Y AR GVTR M D
Sbjct: 7 RVVALVDMDCFFVQVEQRQNPHLRNKPCAVVQYKSWKGGGIIAVSYEARAFGVTRSMWAD 66
Query: 571 EAKEKCPNIQLPSVPCHRGKADISKYRDA 657
+AK+ CP++ L V RGKA+++KYR+A
Sbjct: 67 DAKKLCPDLLLAQVRESRGKANLTKYREA 95
>AL353602-7|CAI12787.1| 713|Homo sapiens polymerase (DNA directed),
eta protein.
Length = 713
Score = 119 bits (287), Expect = 8e-27
Identities = 54/89 (60%), Positives = 68/89 (76%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGD 570
RVV L+DMDCF+ QVE++ NP L+ KP AVVQY WKGGGIIAV+Y AR GVTR M D
Sbjct: 7 RVVALVDMDCFFVQVEQRQNPHLRNKPCAVVQYKSWKGGGIIAVSYEARAFGVTRSMWAD 66
Query: 571 EAKEKCPNIQLPSVPCHRGKADISKYRDA 657
+AK+ CP++ L V RGKA+++KYR+A
Sbjct: 67 DAKKLCPDLLLAQVRESRGKANLTKYREA 95
>AL353602-6|CAI12786.1| 414|Homo sapiens polymerase (DNA directed),
eta protein.
Length = 414
Score = 119 bits (287), Expect = 8e-27
Identities = 54/89 (60%), Positives = 68/89 (76%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGD 570
RVV L+DMDCF+ QVE++ NP L+ KP AVVQY WKGGGIIAV+Y AR GVTR M D
Sbjct: 7 RVVALVDMDCFFVQVEQRQNPHLRNKPCAVVQYKSWKGGGIIAVSYEARAFGVTRSMWAD 66
Query: 571 EAKEKCPNIQLPSVPCHRGKADISKYRDA 657
+AK+ CP++ L V RGKA+++KYR+A
Sbjct: 67 DAKKLCPDLLLAQVRESRGKANLTKYREA 95
>AF158185-1|AAD43810.1| 713|Homo sapiens xeroderma pigmentosum
variant RAD30 protein.
Length = 713
Score = 119 bits (287), Expect = 8e-27
Identities = 54/89 (60%), Positives = 68/89 (76%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGD 570
RVV L+DMDCF+ QVE++ NP L+ KP AVVQY WKGGGIIAV+Y AR GVTR M D
Sbjct: 7 RVVALVDMDCFFVQVEQRQNPHLRNKPCAVVQYKSWKGGGIIAVSYEARAFGVTRSMWAD 66
Query: 571 EAKEKCPNIQLPSVPCHRGKADISKYRDA 657
+AK+ CP++ L V RGKA+++KYR+A
Sbjct: 67 DAKKLCPDLLLAQVRESRGKANLTKYREA 95
>AB038008-1|BAB18601.1| 713|Homo sapiens DNA polymerase eta
protein.
Length = 713
Score = 119 bits (287), Expect = 8e-27
Identities = 54/89 (60%), Positives = 68/89 (76%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGD 570
RVV L+DMDCF+ QVE++ NP L+ KP AVVQY WKGGGIIAV+Y AR GVTR M D
Sbjct: 7 RVVALVDMDCFFVQVEQRQNPHLRNKPCAVVQYKSWKGGGIIAVSYEARAFGVTRSMWAD 66
Query: 571 EAKEKCPNIQLPSVPCHRGKADISKYRDA 657
+AK+ CP++ L V RGKA+++KYR+A
Sbjct: 67 DAKKLCPDLLLAQVRESRGKANLTKYREA 95
>AB024313-1|BAA81666.1| 713|Homo sapiens DNA polymerase eta
protein.
Length = 713
Score = 119 bits (287), Expect = 8e-27
Identities = 54/89 (60%), Positives = 68/89 (76%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGD 570
RVV L+DMDCF+ QVE++ NP L+ KP AVVQY WKGGGIIAV+Y AR GVTR M D
Sbjct: 7 RVVALVDMDCFFVQVEQRQNPHLRNKPCAVVQYKSWKGGGIIAVSYEARAFGVTRSMWAD 66
Query: 571 EAKEKCPNIQLPSVPCHRGKADISKYRDA 657
+AK+ CP++ L V RGKA+++KYR+A
Sbjct: 67 DAKKLCPDLLLAQVRESRGKANLTKYREA 95
>BC142730-1|AAI42731.1| 705|Homo sapiens POLI protein protein.
Length = 705
Score = 67.7 bits (158), Expect = 3e-11
Identities = 39/88 (44%), Positives = 54/88 (61%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGD 570
RV+V +D+DCFY QVE NPELK KP+ V Q ++ NY AR LGV + M
Sbjct: 18 RVIVHVDLDCFYAQVEMISNPELKDKPLGVQQKYL-----VVTCNYEARKLGVKKLMNVR 72
Query: 571 EAKEKCPNIQLPSVPCHRGKADISKYRD 654
+AKEKCP + L + G+ D+++YR+
Sbjct: 73 DAKEKCPQLVLVN-----GE-DLTRYRE 94
>BC142674-1|AAI42675.1| 705|Homo sapiens POLI protein protein.
Length = 705
Score = 67.7 bits (158), Expect = 3e-11
Identities = 39/88 (44%), Positives = 54/88 (61%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGD 570
RV+V +D+DCFY QVE NPELK KP+ V Q ++ NY AR LGV + M
Sbjct: 18 RVIVHVDLDCFYAQVEMISNPELKDKPLGVQQKYL-----VVTCNYEARKLGVKKLMNVR 72
Query: 571 EAKEKCPNIQLPSVPCHRGKADISKYRD 654
+AKEKCP + L + G+ D+++YR+
Sbjct: 73 DAKEKCPQLVLVN-----GE-DLTRYRE 94
>BC032662-1|AAH32662.1| 715|Homo sapiens polymerase (DNA directed)
iota protein.
Length = 715
Score = 67.7 bits (158), Expect = 3e-11
Identities = 39/88 (44%), Positives = 54/88 (61%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGD 570
RV+V +D+DCFY QVE NPELK KP+ V Q ++ NY AR LGV + M
Sbjct: 28 RVIVHVDLDCFYAQVEMISNPELKDKPLGVQQKYL-----VVTCNYEARKLGVKKLMNVR 82
Query: 571 EAKEKCPNIQLPSVPCHRGKADISKYRD 654
+AKEKCP + L + G+ D+++YR+
Sbjct: 83 DAKEKCPQLVLVN-----GE-DLTRYRE 104
>AY094607-1|AAM11872.1| 715|Homo sapiens polymerase (DNA directed)
iota protein.
Length = 715
Score = 67.7 bits (158), Expect = 3e-11
Identities = 39/88 (44%), Positives = 54/88 (61%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGD 570
RV+V +D+DCFY QVE NPELK KP+ V Q ++ NY AR LGV + M
Sbjct: 28 RVIVHVDLDCFYAQVEMISNPELKDKPLGVQQKYL-----VVTCNYEARKLGVKKLMNVR 82
Query: 571 EAKEKCPNIQLPSVPCHRGKADISKYRD 654
+AKEKCP + L + G+ D+++YR+
Sbjct: 83 DAKEKCPQLVLVN-----GE-DLTRYRE 104
>AL136670-1|CAB66605.1| 715|Homo sapiens hypothetical protein
protein.
Length = 715
Score = 67.7 bits (158), Expect = 3e-11
Identities = 39/88 (44%), Positives = 54/88 (61%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGD 570
RV+V +D+DCFY QVE NPELK KP+ V Q ++ NY AR LGV + M
Sbjct: 28 RVIVHVDLDCFYAQVEMISNPELKDKPLGVQQKYL-----VVTCNYEARKLGVKKLMNVR 82
Query: 571 EAKEKCPNIQLPSVPCHRGKADISKYRD 654
+AKEKCP + L + G+ D+++YR+
Sbjct: 83 DAKEKCPQLVLVN-----GE-DLTRYRE 104
>AF245438-1|AAF63383.1| 715|Homo sapiens DNA polymerase iota
protein.
Length = 715
Score = 67.7 bits (158), Expect = 3e-11
Identities = 39/88 (44%), Positives = 54/88 (61%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGD 570
RV+V +D+DCFY QVE NPELK KP+ V Q ++ NY AR LGV + M
Sbjct: 28 RVIVHVDLDCFYAQVEMISNPELKDKPLGVQQKYL-----VVTCNYEARKLGVKKLMNVR 82
Query: 571 EAKEKCPNIQLPSVPCHRGKADISKYRD 654
+AKEKCP + L + G+ D+++YR+
Sbjct: 83 DAKEKCPQLVLVN-----GE-DLTRYRE 104
>AF140501-1|AAD50381.1| 715|Homo sapiens DNA polymerase iota
protein.
Length = 715
Score = 67.7 bits (158), Expect = 3e-11
Identities = 39/88 (44%), Positives = 54/88 (61%)
Frame = +1
Query: 391 RVVVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGD 570
RV+V +D+DCFY QVE NPELK KP+ V Q ++ NY AR LGV + M
Sbjct: 28 RVIVHVDLDCFYAQVEMISNPELKDKPLGVQQKYL-----VVTCNYEARKLGVKKLMNVR 82
Query: 571 EAKEKCPNIQLPSVPCHRGKADISKYRD 654
+AKEKCP + L + G+ D+++YR+
Sbjct: 83 DAKEKCPQLVLVN-----GE-DLTRYRE 104
>BC050718-1|AAH50718.1| 472|Homo sapiens POLK protein protein.
Length = 472
Score = 51.6 bits (118), Expect = 2e-06
Identities = 39/89 (43%), Positives = 44/89 (49%)
Frame = +1
Query: 397 VVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGDEA 576
+V IDMD FY VE + NPELK KPIAV + + NY AR GV M G A
Sbjct: 103 IVHIDMDAFYAAVEMRDNPELKDKPIAVGSMSM-----LSTSNYHARRFGVRAAMPGFIA 157
Query: 577 KEKCPNIQLPSVPCHRGKADISKYRDAGK 663
K CP QL VP + KYR K
Sbjct: 158 KRLCP--QLIIVP-----PNFDKYRAVSK 179
>BC014955-1|AAH14955.1| 313|Homo sapiens POLK protein protein.
Length = 313
Score = 51.6 bits (118), Expect = 2e-06
Identities = 39/89 (43%), Positives = 44/89 (49%)
Frame = +1
Query: 397 VVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGDEA 576
+V IDMD FY VE + NPELK KPIAV + + NY AR GV M G A
Sbjct: 103 IVHIDMDAFYAAVEMRDNPELKDKPIAVGSMSM-----LSTSNYHARRFGVRAAMPGFIA 157
Query: 577 KEKCPNIQLPSVPCHRGKADISKYRDAGK 663
K CP QL VP + KYR K
Sbjct: 158 KRLCP--QLIIVP-----PNFDKYRAVSK 179
>AY769932-1|AAV80830.1| 461|Homo sapiens polymerase kappa isoform 4
protein.
Length = 461
Score = 51.6 bits (118), Expect = 2e-06
Identities = 39/89 (43%), Positives = 44/89 (49%)
Frame = +1
Query: 397 VVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGDEA 576
+V IDMD FY VE + NPELK KPIAV + + NY AR GV M G A
Sbjct: 103 IVHIDMDAFYAAVEMRDNPELKDKPIAVGSMSM-----LSTSNYHARRFGVRAAMPGFIA 157
Query: 577 KEKCPNIQLPSVPCHRGKADISKYRDAGK 663
K CP QL VP + KYR K
Sbjct: 158 KRLCP--QLIIVP-----PNFDKYRAVSK 179
>AY769931-1|AAV80829.1| 371|Homo sapiens polymerase kappa isoform 3
protein.
Length = 371
Score = 51.6 bits (118), Expect = 2e-06
Identities = 39/89 (43%), Positives = 44/89 (49%)
Frame = +1
Query: 397 VVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGDEA 576
+V IDMD FY VE + NPELK KPIAV + + NY AR GV M G A
Sbjct: 13 IVHIDMDAFYAAVEMRDNPELKDKPIAVGSMSM-----LSTSNYHARRFGVRAAMPGFIA 67
Query: 577 KEKCPNIQLPSVPCHRGKADISKYRDAGK 663
K CP QL VP + KYR K
Sbjct: 68 KRLCP--QLIIVP-----PNFDKYRAVSK 89
>AY769930-1|AAV80828.1| 489|Homo sapiens polymerase kappa isoform 2
protein.
Length = 489
Score = 51.6 bits (118), Expect = 2e-06
Identities = 39/89 (43%), Positives = 44/89 (49%)
Frame = +1
Query: 397 VVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGDEA 576
+V IDMD FY VE + NPELK KPIAV + + NY AR GV M G A
Sbjct: 103 IVHIDMDAFYAAVEMRDNPELKDKPIAVGSMSM-----LSTSNYHARRFGVRAAMPGFIA 157
Query: 577 KEKCPNIQLPSVPCHRGKADISKYRDAGK 663
K CP QL VP + KYR K
Sbjct: 158 KRLCP--QLIIVP-----PNFDKYRAVSK 179
>AY769929-1|AAV80827.1| 780|Homo sapiens polymerase kappa isoform 1
protein.
Length = 780
Score = 51.6 bits (118), Expect = 2e-06
Identities = 39/89 (43%), Positives = 44/89 (49%)
Frame = +1
Query: 397 VVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGDEA 576
+V IDMD FY VE + NPELK KPIAV + + NY AR GV M G A
Sbjct: 13 IVHIDMDAFYAAVEMRDNPELKDKPIAVGSMSM-----LSTSNYHARRFGVRAAMPGFIA 67
Query: 577 KEKCPNIQLPSVPCHRGKADISKYRDAGK 663
K CP QL VP + KYR K
Sbjct: 68 KRLCP--QLIIVP-----PNFDKYRAVSK 89
>AY273797-1|AAP12648.1| 870|Homo sapiens polymerase (DNA directed)
kappa protein.
Length = 870
Score = 51.6 bits (118), Expect = 2e-06
Identities = 39/89 (43%), Positives = 44/89 (49%)
Frame = +1
Query: 397 VVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGDEA 576
+V IDMD FY VE + NPELK KPIAV + + NY AR GV M G A
Sbjct: 103 IVHIDMDAFYAAVEMRDNPELKDKPIAVGSMSM-----LSTSNYHARRFGVRAAMPGFIA 157
Query: 577 KEKCPNIQLPSVPCHRGKADISKYRDAGK 663
K CP QL VP + KYR K
Sbjct: 158 KRLCP--QLIIVP-----PNFDKYRAVSK 179
>AK091659-1|BAC03714.1| 372|Homo sapiens protein ( Homo sapiens
cDNA FLJ34340 fis, clone FEBRA2009754, highly similar to
Homo sapiens DINB protein (DINB1) mRNA. ).
Length = 372
Score = 51.6 bits (118), Expect = 2e-06
Identities = 39/89 (43%), Positives = 44/89 (49%)
Frame = +1
Query: 397 VVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGDEA 576
+V IDMD FY VE + NPELK KPIAV + + NY AR GV M G A
Sbjct: 13 IVHIDMDAFYAAVEMRDNPELKDKPIAVGSMSM-----LSTSNYHARRFGVRAAMPGFIA 67
Query: 577 KEKCPNIQLPSVPCHRGKADISKYRDAGK 663
K CP QL VP + KYR K
Sbjct: 68 KRLCP--QLIIVP-----PNFDKYRAVSK 89
>AF315602-1|AAN15780.1| 672|Homo sapiens DNA polymerase kappa
protein.
Length = 672
Score = 51.6 bits (118), Expect = 2e-06
Identities = 39/89 (43%), Positives = 44/89 (49%)
Frame = +1
Query: 397 VVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGDEA 576
+V IDMD FY VE + NPELK KPIAV + + NY AR GV M G A
Sbjct: 103 IVHIDMDAFYAAVEMRDNPELKDKPIAVGSMSM-----LSTSNYHARRFGVRAAMPGFIA 157
Query: 577 KEKCPNIQLPSVPCHRGKADISKYRDAGK 663
K CP QL VP + KYR K
Sbjct: 158 KRLCP--QLIIVP-----PNFDKYRAVSK 179
>AF194973-1|AAF23270.1| 870|Homo sapiens DINP protein protein.
Length = 870
Score = 51.6 bits (118), Expect = 2e-06
Identities = 39/89 (43%), Positives = 44/89 (49%)
Frame = +1
Query: 397 VVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGDEA 576
+V IDMD FY VE + NPELK KPIAV + + NY AR GV M G A
Sbjct: 103 IVHIDMDAFYAAVEMRDNPELKDKPIAVGSMSM-----LSTSNYHARRFGVRAAMPGFIA 157
Query: 577 KEKCPNIQLPSVPCHRGKADISKYRDAGK 663
K CP QL VP + KYR K
Sbjct: 158 KRLCP--QLIIVP-----PNFDKYRAVSK 179
>AF163570-1|AAF02540.1| 870|Homo sapiens DINB protein protein.
Length = 870
Score = 51.6 bits (118), Expect = 2e-06
Identities = 39/89 (43%), Positives = 44/89 (49%)
Frame = +1
Query: 397 VVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGDEA 576
+V IDMD FY VE + NPELK KPIAV + + NY AR GV M G A
Sbjct: 103 IVHIDMDAFYAAVEMRDNPELKDKPIAVGSMSM-----LSTSNYHARRFGVRAAMPGFIA 157
Query: 577 KEKCPNIQLPSVPCHRGKADISKYRDAGK 663
K CP QL VP + KYR K
Sbjct: 158 KRLCP--QLIIVP-----PNFDKYRAVSK 179
>AB209291-1|BAD92528.1| 790|Homo sapiens polymerase (DNA directed)
kappa variant protein.
Length = 790
Score = 51.6 bits (118), Expect = 2e-06
Identities = 39/89 (43%), Positives = 44/89 (49%)
Frame = +1
Query: 397 VVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGDEA 576
+V IDMD FY VE + NPELK KPIAV + + NY AR GV M G A
Sbjct: 23 IVHIDMDAFYAAVEMRDNPELKDKPIAVGSMSM-----LSTSNYHARRFGVRAAMPGFIA 77
Query: 577 KEKCPNIQLPSVPCHRGKADISKYRDAGK 663
K CP QL VP + KYR K
Sbjct: 78 KRLCP--QLIIVP-----PNFDKYRAVSK 99
>AB036935-1|BAB58976.1| 146|Homo sapiens DINB1 protein.
Length = 146
Score = 51.6 bits (118), Expect = 2e-06
Identities = 39/89 (43%), Positives = 44/89 (49%)
Frame = +1
Query: 397 VVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGDEA 576
+V IDMD FY VE + NPELK KPIAV + + NY AR GV M G A
Sbjct: 18 IVHIDMDAFYAAVEMRDNPELKDKPIAVGSMSM-----LSTSNYHARRFGVRAAMPGFIA 72
Query: 577 KEKCPNIQLPSVPCHRGKADISKYRDAGK 663
K CP QL VP + KYR K
Sbjct: 73 KRLCP--QLIIVP-----PNFDKYRAVSK 94
>AB027564-1|BAA86943.1| 870|Homo sapiens DINB1 protein.
Length = 870
Score = 51.6 bits (118), Expect = 2e-06
Identities = 39/89 (43%), Positives = 44/89 (49%)
Frame = +1
Query: 397 VVLIDMDCFYCQVEEKLNPELKGKPIAVVQYNPWKGGGIIAVNYVARDLGVTRHMRGDEA 576
+V IDMD FY VE + NPELK KPIAV + + NY AR GV M G A
Sbjct: 103 IVHIDMDAFYAAVEMRDNPELKDKPIAVGSMSM-----LSTSNYHARRFGVRAAMPGFIA 157
Query: 577 KEKCPNIQLPSVPCHRGKADISKYRDAGK 663
K CP QL VP + KYR K
Sbjct: 158 KRLCP--QLIIVP-----PNFDKYRAVSK 179
>AB036934-2|BAB58975.1| 136|Homo sapiens DINB1 protein.
Length = 136
Score = 41.1 bits (92), Expect = 0.003
Identities = 19/28 (67%), Positives = 21/28 (75%)
Frame = +1
Query: 397 VVLIDMDCFYCQVEEKLNPELKGKPIAV 480
+V IDMD FY VE + NPELK KPIAV
Sbjct: 103 IVHIDMDAFYAAVEMRDNPELKDKPIAV 130
>BC130411-1|AAI30412.1| 1250|Homo sapiens REV1 homolog (S.
cerevisiae) protein.
Length = 1250
Score = 37.5 bits (83), Expect = 0.043
Identities = 14/28 (50%), Positives = 21/28 (75%)
Frame = +1
Query: 397 VVLIDMDCFYCQVEEKLNPELKGKPIAV 480
++ +DMDCF+ V + P+LKGKP+AV
Sbjct: 419 IMHVDMDCFFVSVGIRNRPDLKGKPVAV 446
Score = 30.3 bits (65), Expect = 6.5
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = +1
Query: 511 IIAVNYVARDLGVTRHMRGDEAKEKCPNIQLPSVPCHRGK 630
I + +Y AR LG+ M AK+ CPN+Q H K
Sbjct: 507 IASCSYEARQLGIKNGMFFGHAKQLCPNLQAVPYDFHAYK 546
>BC037734-1|AAH37734.1| 1114|Homo sapiens REV1 protein protein.
Length = 1114
Score = 37.5 bits (83), Expect = 0.043
Identities = 14/28 (50%), Positives = 21/28 (75%)
Frame = +1
Query: 397 VVLIDMDCFYCQVEEKLNPELKGKPIAV 480
++ +DMDCF+ V + P+LKGKP+AV
Sbjct: 348 IMHVDMDCFFVSVGIRNRPDLKGKPVAV 375
Score = 30.3 bits (65), Expect = 6.5
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = +1
Query: 511 IIAVNYVARDLGVTRHMRGDEAKEKCPNIQLPSVPCHRGK 630
I + +Y AR LG+ M AK+ CPN+Q H K
Sbjct: 436 IASCSYEARQLGIKNGMFFGHAKQLCPNLQAVPYDFHAYK 475
>AF357886-1|AAK43708.1| 1251|Homo sapiens terminal deoxycytidyl
transferase protein.
Length = 1251
Score = 37.5 bits (83), Expect = 0.043
Identities = 14/28 (50%), Positives = 21/28 (75%)
Frame = +1
Query: 397 VVLIDMDCFYCQVEEKLNPELKGKPIAV 480
++ +DMDCF+ V + P+LKGKP+AV
Sbjct: 419 IMHVDMDCFFVSVGIRNRPDLKGKPVAV 446
Score = 30.3 bits (65), Expect = 6.5
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = +1
Query: 511 IIAVNYVARDLGVTRHMRGDEAKEKCPNIQLPSVPCHRGK 630
I + +Y AR LG+ M AK+ CPN+Q H K
Sbjct: 508 IASCSYEARQLGIKNGMFFGHAKQLCPNLQAVPYDFHAYK 547
>AF206019-1|AAF18986.1| 1251|Homo sapiens REV1 protein protein.
Length = 1251
Score = 37.5 bits (83), Expect = 0.043
Identities = 14/28 (50%), Positives = 21/28 (75%)
Frame = +1
Query: 397 VVLIDMDCFYCQVEEKLNPELKGKPIAV 480
++ +DMDCF+ V + P+LKGKP+AV
Sbjct: 419 IMHVDMDCFFVSVGIRNRPDLKGKPVAV 446
Score = 30.3 bits (65), Expect = 6.5
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = +1
Query: 511 IIAVNYVARDLGVTRHMRGDEAKEKCPNIQLPSVPCHRGK 630
I + +Y AR LG+ M AK+ CPN+Q H K
Sbjct: 508 IASCSYEARQLGIKNGMFFGHAKQLCPNLQAVPYDFHAYK 547
>AF151538-1|AAF06731.1| 1251|Homo sapiens deoxycytidyl transferase
protein.
Length = 1251
Score = 37.5 bits (83), Expect = 0.043
Identities = 14/28 (50%), Positives = 21/28 (75%)
Frame = +1
Query: 397 VVLIDMDCFYCQVEEKLNPELKGKPIAV 480
++ +DMDCF+ V + P+LKGKP+AV
Sbjct: 419 IMHVDMDCFFVSVGIRNRPDLKGKPVAV 446
Score = 30.3 bits (65), Expect = 6.5
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = +1
Query: 511 IIAVNYVARDLGVTRHMRGDEAKEKCPNIQLPSVPCHRGK 630
I + +Y AR LG+ M AK+ CPN+Q H K
Sbjct: 508 IASCSYEARQLGIKNGMFFGHAKQLCPNLQAVPYDFHAYK 547
>AC018690-2|AAY24314.1| 1251|Homo sapiens unknown protein.
Length = 1251
Score = 37.5 bits (83), Expect = 0.043
Identities = 14/28 (50%), Positives = 21/28 (75%)
Frame = +1
Query: 397 VVLIDMDCFYCQVEEKLNPELKGKPIAV 480
++ +DMDCF+ V + P+LKGKP+AV
Sbjct: 419 IMHVDMDCFFVSVGIRNRPDLKGKPVAV 446
Score = 30.3 bits (65), Expect = 6.5
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = +1
Query: 511 IIAVNYVARDLGVTRHMRGDEAKEKCPNIQLPSVPCHRGK 630
I + +Y AR LG+ M AK+ CPN+Q H K
Sbjct: 508 IASCSYEARQLGIKNGMFFGHAKQLCPNLQAVPYDFHAYK 547
>AB047646-1|BAB21441.1| 1250|Homo sapiens Rev1S protein.
Length = 1250
Score = 37.5 bits (83), Expect = 0.043
Identities = 14/28 (50%), Positives = 21/28 (75%)
Frame = +1
Query: 397 VVLIDMDCFYCQVEEKLNPELKGKPIAV 480
++ +DMDCF+ V + P+LKGKP+AV
Sbjct: 419 IMHVDMDCFFVSVGIRNRPDLKGKPVAV 446
Score = 30.3 bits (65), Expect = 6.5
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = +1
Query: 511 IIAVNYVARDLGVTRHMRGDEAKEKCPNIQLPSVPCHRGK 630
I + +Y AR LG+ M AK+ CPN+Q H K
Sbjct: 507 IASCSYEARQLGIKNGMFFGHAKQLCPNLQAVPYDFHAYK 546
>AL355802-26|CAI42643.1| 72|Homo sapiens polymerase (DNA
directed), eta protein.
Length = 72
Score = 37.1 bits (82), Expect = 0.056
Identities = 16/33 (48%), Positives = 24/33 (72%)
Frame = +1
Query: 559 MRGDEAKEKCPNIQLPSVPCHRGKADISKYRDA 657
M D+AK+ CP++ L V RGKA+++KYR+A
Sbjct: 1 MWADDAKKLCPDLLLAQVRESRGKANLTKYREA 33
>AJ131720-1|CAB38231.1| 774|Homo sapiens alpha integrin binding
protein 80 protein.
Length = 774
Score = 30.3 bits (65), Expect = 6.5
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = +1
Query: 511 IIAVNYVARDLGVTRHMRGDEAKEKCPNIQLPSVPCHRGK 630
I + +Y AR LG+ M AK+ CPN+Q H K
Sbjct: 31 IASCSYEARQLGIKNGMFFGHAKQLCPNLQAVPYDFHAYK 70
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,394,059
Number of Sequences: 237096
Number of extensions: 1711368
Number of successful extensions: 2522
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 2436
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2515
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7535049140
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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