Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11e23
         (241 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    23   0.46 
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    23   0.46 
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     22   0.80 
Z69742-1|CAA93624.1|   72|Tribolium castaneum arylphorin protein.      19   5.7  
AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.           19   5.7  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    19   9.9  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    19   9.9  

>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
          protein.
          Length = 302

 Score = 23.0 bits (47), Expect = 0.46
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -3

Query: 77 PTTTVHDDSTGSHYNVFS 24
          P     D S+G HYN+F+
Sbjct: 37 PCKVCGDFSSGKHYNIFA 54


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
          protein.
          Length = 406

 Score = 23.0 bits (47), Expect = 0.46
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -3

Query: 77 PTTTVHDDSTGSHYNVFS 24
          P     D S+G HYN+F+
Sbjct: 37 PCKVCGDFSSGKHYNIFA 54


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 22.2 bits (45), Expect = 0.80
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -3

Query: 113 RFKMVHAGSTQCPTTTVHDDST 48
           RF++++AG   CP     D+ T
Sbjct: 281 RFRVINAGFLNCPIEVSIDNHT 302


>Z69742-1|CAA93624.1|   72|Tribolium castaneum arylphorin protein.
          Length = 72

 Score = 19.4 bits (38), Expect = 5.7
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = +3

Query: 111 SFNYWVANIDLNPNEKADF 167
           SFN    N+D    E+ DF
Sbjct: 37  SFNQTAQNVDTFVREQIDF 55


>AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.
          Length = 253

 Score = 19.4 bits (38), Expect = 5.7
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +2

Query: 149 QRKSRF*HYCPQRRFMG*TGRSCRER 226
           +RK +F  Y PQ++      R+ RER
Sbjct: 70  KRKIQFMPYGPQQQPASVARRNARER 95


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 18.6 bits (36), Expect = 9.9
 Identities = 5/13 (38%), Positives = 11/13 (84%)
 Frame = -3

Query: 113 RFKMVHAGSTQCP 75
           RF+M+++ ++ CP
Sbjct: 345 RFRMINSFASVCP 357


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 18.6 bits (36), Expect = 9.9
 Identities = 5/13 (38%), Positives = 11/13 (84%)
 Frame = -3

Query: 113 RFKMVHAGSTQCP 75
           RF+M+++ ++ CP
Sbjct: 345 RFRMINSFASVCP 357


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 54,776
Number of Sequences: 336
Number of extensions: 967
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 46
effective length of database: 107,129
effective search space used:  3535257
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)