Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11e23
         (241 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    23   2.0  
AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    21   6.0  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            21   6.0  
AY146734-1|AAO12094.1|  176|Anopheles gambiae odorant-binding pr...    21   6.0  
AY146752-1|AAO12067.1|  277|Anopheles gambiae odorant-binding pr...    21   7.9  

>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
           protein.
          Length = 3325

 Score = 22.6 bits (46), Expect = 2.0
 Identities = 9/15 (60%), Positives = 9/15 (60%)
 Frame = -2

Query: 105 NGSRRQHPMPHDHRT 61
           NG R Q  MP  HRT
Sbjct: 537 NGKRLQQMMPSKHRT 551



 Score = 21.4 bits (43), Expect = 4.5
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = +3

Query: 165 FNITVPKDASWVEQEDHVVNEL 230
           F  T+P++AS VE+E  V+  L
Sbjct: 259 FPETIPEEASSVEEERVVIFRL 280


>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 21.0 bits (42), Expect = 6.0
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -3

Query: 86  TQCPTTTVHDD 54
           TQ PTT++H D
Sbjct: 446 TQFPTTSIHGD 456


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 21.0 bits (42), Expect = 6.0
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -3

Query: 134  VSDPIIKRFKMVHAGSTQC 78
            VSD  + R  +VH   T+C
Sbjct: 1968 VSDDKVAREALVHLNETEC 1986


>AY146734-1|AAO12094.1|  176|Anopheles gambiae odorant-binding
           protein AgamOBP24 protein.
          Length = 176

 Score = 21.0 bits (42), Expect = 6.0
 Identities = 9/19 (47%), Positives = 13/19 (68%), Gaps = 2/19 (10%)
 Frame = -1

Query: 109 LKWFTQAAPNAPRP--PYT 59
           ++ FT +AP  PRP  P+T
Sbjct: 3   IELFTLSAPTVPRPGGPHT 21


>AY146752-1|AAO12067.1|  277|Anopheles gambiae odorant-binding
           protein AgamOBP35 protein.
          Length = 277

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 10/35 (28%), Positives = 16/35 (45%)
 Frame = +3

Query: 30  DVVMATGRIVVYGGRGALGAACVNHFKSFNYWVAN 134
           D    T R +VY  +   G  CV  +++F  +  N
Sbjct: 102 DNAKRTERCLVYLPQECNGEPCVQAYRAFQCYYQN 136


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 245,554
Number of Sequences: 2352
Number of extensions: 4187
Number of successful extensions: 12
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 53
effective length of database: 439,323
effective search space used: 11422398
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)