Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11e23
         (241 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC000576-1|AAH00576.1|  244|Homo sapiens QDPR protein protein.         68   5e-12
AK223437-1|BAD97157.1|  244|Homo sapiens quinoid dihydropteridin...    68   5e-12
AB053170-1|BAB20429.1|  244|Homo sapiens dihydropteridine reduct...    68   5e-12
X04882-1|CAA28571.1|  244|Homo sapiens protein ( Human mRNA for ...    68   6e-12
M16447-1|AAA52305.1|  244|Homo sapiens QDPR protein.                   68   6e-12
AJ006239-1|CAA06930.1|  244|Homo sapiens dihydropteridine reduct...    68   6e-12
AF471168-1|AAQ05343.1|  118|Homo sapiens Ig heavy chain variable...    29   3.5  

>BC000576-1|AAH00576.1|  244|Homo sapiens QDPR protein protein.
          Length = 244

 Score = 68.1 bits (159), Expect = 5e-12
 Identities = 30/61 (49%), Positives = 43/61 (70%)
 Frame = +3

Query: 51  RIVVYGGRGALGAACVNHFKSFNYWVANIDLNPNEKADFNITVPKDASWVEQEDHVVNEL 230
           R++VYGGRGALG+ CV  F++ N+WVA++D+  NE+A  +I V    S+ EQ D V  E+
Sbjct: 12  RVLVYGGRGALGSRCVQAFRARNWWVASVDVVENEEASASIIVKMTDSFTEQADQVTAEV 71

Query: 231 G 233
           G
Sbjct: 72  G 72


>AK223437-1|BAD97157.1|  244|Homo sapiens quinoid dihydropteridine
           reductase variant protein.
          Length = 244

 Score = 68.1 bits (159), Expect = 5e-12
 Identities = 30/61 (49%), Positives = 43/61 (70%)
 Frame = +3

Query: 51  RIVVYGGRGALGAACVNHFKSFNYWVANIDLNPNEKADFNITVPKDASWVEQEDHVVNEL 230
           R++VYGGRGALG+ CV  F++ N+WVA++D+  NE+A  +I V    S+ EQ D V  E+
Sbjct: 12  RVLVYGGRGALGSRCVQAFRARNWWVASVDVVENEEASASIIVKMTDSFTEQADQVTAEV 71

Query: 231 G 233
           G
Sbjct: 72  G 72


>AB053170-1|BAB20429.1|  244|Homo sapiens dihydropteridine reductase
           protein.
          Length = 244

 Score = 68.1 bits (159), Expect = 5e-12
 Identities = 30/61 (49%), Positives = 43/61 (70%)
 Frame = +3

Query: 51  RIVVYGGRGALGAACVNHFKSFNYWVANIDLNPNEKADFNITVPKDASWVEQEDHVVNEL 230
           R++VYGGRGALG+ CV  F++ N+WVA++D+  NE+A  +I V    S+ EQ D V  E+
Sbjct: 12  RVLVYGGRGALGSRCVQAFRARNWWVASVDVVENEEASASIIVKMTDSFTEQADQVTAEV 71

Query: 231 G 233
           G
Sbjct: 72  G 72


>X04882-1|CAA28571.1|  244|Homo sapiens protein ( Human mRNA for
           dihydropteridine reductase (hDHPR). ).
          Length = 244

 Score = 67.7 bits (158), Expect = 6e-12
 Identities = 30/61 (49%), Positives = 42/61 (68%)
 Frame = +3

Query: 51  RIVVYGGRGALGAACVNHFKSFNYWVANIDLNPNEKADFNITVPKDASWVEQEDHVVNEL 230
           R++VYGGRGALG+ CV  F++ N+WVA++D+  NE+A   I V    S+ EQ D V  E+
Sbjct: 12  RVLVYGGRGALGSRCVQAFRARNWWVASVDVVENEEASATIIVKMTDSFTEQADQVTAEV 71

Query: 231 G 233
           G
Sbjct: 72  G 72


>M16447-1|AAA52305.1|  244|Homo sapiens QDPR protein.
          Length = 244

 Score = 67.7 bits (158), Expect = 6e-12
 Identities = 30/61 (49%), Positives = 42/61 (68%)
 Frame = +3

Query: 51  RIVVYGGRGALGAACVNHFKSFNYWVANIDLNPNEKADFNITVPKDASWVEQEDHVVNEL 230
           R++VYGGRGALG+ CV  F++ N+WVA++D+  NE+A   I V    S+ EQ D V  E+
Sbjct: 12  RVLVYGGRGALGSRCVQAFRARNWWVASVDVVENEEASATIIVKMTDSFTEQADQVTAEV 71

Query: 231 G 233
           G
Sbjct: 72  G 72


>AJ006239-1|CAA06930.1|  244|Homo sapiens dihydropteridine reductase
           protein.
          Length = 244

 Score = 67.7 bits (158), Expect = 6e-12
 Identities = 30/61 (49%), Positives = 42/61 (68%)
 Frame = +3

Query: 51  RIVVYGGRGALGAACVNHFKSFNYWVANIDLNPNEKADFNITVPKDASWVEQEDHVVNEL 230
           R++VYGGRGALG+ CV  F++ N+WVA++D+  NE+A   I V    S+ EQ D V  E+
Sbjct: 12  RVLVYGGRGALGSRCVQAFRARNWWVASVDVVENEEASATIIVKMTDSFTEQADQVTAEV 71

Query: 231 G 233
           G
Sbjct: 72  G 72


>AF471168-1|AAQ05343.1|  118|Homo sapiens Ig heavy chain variable
           region, VH3 family protein.
          Length = 118

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 18/62 (29%), Positives = 28/62 (45%)
 Frame = +3

Query: 33  VVMATGRIVVYGGRGALGAACVNHFKSFNYWVANIDLNPNEKADFNITVPKDASWVEQED 212
           +V + G +V  GG   L  A  + F    YW++ +   P E  +F   + +D S V   D
Sbjct: 4   LVQSGGGLVQPGGSLRLSCAA-SGFSFSTYWMSWVRQGPGETLEFVANINEDGSVVNYVD 62

Query: 213 HV 218
            V
Sbjct: 63  SV 64


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,257,380
Number of Sequences: 237096
Number of extensions: 524781
Number of successful extensions: 1342
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1332
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1342
length of database: 76,859,062
effective HSP length: 58
effective length of database: 63,107,494
effective search space used: 1325257374
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)