Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11e22
         (614 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q17219 Cluster: Egg-specific protein precursor; n=2; Bo...   216   4e-55
UniRef50_Q86M39 Cluster: KK-42-binding protein precursor; n=1; A...    47   4e-04
UniRef50_O77107 Cluster: Yolk polypeptide 2; n=1; Plodia interpu...    39   0.11 
UniRef50_Q5LS88 Cluster: Cytochrome c-type biogenesis protein Cc...    34   2.3  
UniRef50_A4S0L4 Cluster: Predicted protein; n=2; Ostreococcus|Re...    33   7.1  
UniRef50_Q7RPI5 Cluster: Putative uncharacterized protein PY0147...    33   7.1  
UniRef50_A6R123 Cluster: Predicted protein; n=1; Ajellomyces cap...    33   7.1  
UniRef50_Q6N5B2 Cluster: Putative uncharacterized protein precur...    32   9.4  
UniRef50_A0YAG6 Cluster: Putative uncharacterized protein; n=1; ...    32   9.4  

>UniRef50_Q17219 Cluster: Egg-specific protein precursor; n=2;
           Bombyx mori|Rep: Egg-specific protein precursor - Bombyx
           mori (Silk moth)
          Length = 559

 Score =  216 bits (527), Expect = 4e-55
 Identities = 110/159 (69%), Positives = 110/159 (69%)
 Frame = +3

Query: 21  MKTIYALLCLTLVQSISCSIFMTKQHSQDDIIQHPLDYVEXXXXXXXXXXXXXTLNKXXX 200
           MKTIYALLCLTLVQSISCSIFMTKQHSQDDIIQHPLDYVE             TLNK   
Sbjct: 1   MKTIYALLCLTLVQSISCSIFMTKQHSQDDIIQHPLDYVEQQIHQQKQKLQKQTLNKRSH 60

Query: 201 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEDETKQVHDKMNVKHHSPVYSVIMKLKKE 380
                                         QEDE K V DKMNVKHHSPVYSVIMKLKKE
Sbjct: 61  QHSDSDSDSASRAAASHSASQSSSSQSSSSQEDEAKHVQDKMNVKHHSPVYSVIMKLKKE 120

Query: 381 VDINHGDSVVWKNIEMASGPNSPVQTEQDIEDIFGDSLK 497
           VDINHGDSVVWKNIEMASGPNSPVQTEQDIEDIFGDSLK
Sbjct: 121 VDINHGDSVVWKNIEMASGPNSPVQTEQDIEDIFGDSLK 159



 Score = 53.2 bits (122), Expect = 5e-06
 Identities = 21/24 (87%), Positives = 22/24 (91%)
 Frame = +1

Query: 496 KTWDHFTDDAKKNTFHDAISENSK 567
           KTWDHFTDDAKKNTFHDAISE  +
Sbjct: 159 KTWDHFTDDAKKNTFHDAISETQR 182



 Score = 42.3 bits (95), Expect = 0.009
 Identities = 18/19 (94%), Positives = 19/19 (100%)
 Frame = +2

Query: 557 KTQRENNEDFHLNATELLK 613
           +TQRENNEDFHLNATELLK
Sbjct: 179 ETQRENNEDFHLNATELLK 197


>UniRef50_Q86M39 Cluster: KK-42-binding protein precursor; n=1;
           Antheraea yamamai|Rep: KK-42-binding protein precursor -
           Antheraea yamamai (Japanese oak silkmoth)
          Length = 502

 Score = 46.8 bits (106), Expect = 4e-04
 Identities = 17/50 (34%), Positives = 33/50 (66%)
 Frame = +3

Query: 342 SPVYSVIMKLKKEVDINHGDSVVWKNIEMASGPNSPVQTEQDIEDIFGDS 491
           SP+Y  + K+   +   +G+ ++WK++E+ +  N+ V T +DI+ IFGD+
Sbjct: 104 SPLYVSVTKVNNVMSPTYGEPIMWKDLELTNNQNTQVATTEDIKKIFGDA 153


>UniRef50_O77107 Cluster: Yolk polypeptide 2; n=1; Plodia
           interpunctella|Rep: Yolk polypeptide 2 - Plodia
           interpunctella (Indianmeal moth)
          Length = 616

 Score = 38.7 bits (86), Expect = 0.11
 Identities = 22/59 (37%), Positives = 32/59 (54%)
 Frame = +3

Query: 360 IMKLKKEVDINHGDSVVWKNIEMASGPNSPVQTEQDIEDIFGDSLKDVGSFH*RCKEKY 536
           ++K   E    +GD   W+ I+ A GPNS V  ++DIE IF ++ K +       KEKY
Sbjct: 168 LLKKNTERTETYGDVADWRGIKYAVGPNSKV-LKKDIESIFYEAQKSMKHPSEETKEKY 225


>UniRef50_Q5LS88 Cluster: Cytochrome c-type biogenesis protein CcmF;
           n=2; Rhodobacterales|Rep: Cytochrome c-type biogenesis
           protein CcmF - Silicibacter pomeroyi
          Length = 654

 Score = 34.3 bits (75), Expect = 2.3
 Identities = 11/30 (36%), Positives = 24/30 (80%)
 Frame = -3

Query: 531 FLCIVSEMIPRLLGSHRKYPQYLALSEPAS 442
           F+  + +M+  L+G+H+++P ++AL+EPA+
Sbjct: 14  FMVAIVQMVVPLIGAHKRWPGWMALAEPAA 43


>UniRef50_A4S0L4 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
           Predicted protein - Ostreococcus lucimarinus CCE9901
          Length = 741

 Score = 32.7 bits (71), Expect = 7.1
 Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
 Frame = +3

Query: 321 KMNVKHHSPVYSVIMKLKK-EVDINHGDSVVWKNIEMASGP 440
           K N+KHH  V+S+I  L K E+  +HG   +  NIE+   P
Sbjct: 180 KYNLKHHENVFSMIGDLMKFEIMYHHGGLYMDTNIELLRDP 220


>UniRef50_Q7RPI5 Cluster: Putative uncharacterized protein PY01474;
           n=8; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein PY01474 - Plasmodium yoelii yoelii
          Length = 938

 Score = 32.7 bits (71), Expect = 7.1
 Identities = 14/48 (29%), Positives = 29/48 (60%)
 Frame = +3

Query: 360 IMKLKKEVDINHGDSVVWKNIEMASGPNSPVQTEQDIEDIFGDSLKDV 503
           ++++KKE  + +GDSV   N    +G    V+  ++I+++  D +K+V
Sbjct: 1   MIQIKKEDFLKNGDSVETSNTNECNGEVKEVKEAEEIKEVKADEIKEV 48


>UniRef50_A6R123 Cluster: Predicted protein; n=1; Ajellomyces
           capsulatus NAm1|Rep: Predicted protein - Ajellomyces
           capsulatus NAm1
          Length = 1359

 Score = 32.7 bits (71), Expect = 7.1
 Identities = 15/44 (34%), Positives = 25/44 (56%)
 Frame = +3

Query: 315 HDKMNVKHHSPVYSVIMKLKKEVDINHGDSVVWKNIEMASGPNS 446
           H K+NV H S + S+     +++D  H  ++ W+NIE+   P S
Sbjct: 693 HGKLNVGHISDLESIE---PQQMDQKHAPAISWENIEVLDSPGS 733


>UniRef50_Q6N5B2 Cluster: Putative uncharacterized protein
           precursor; n=1; Rhodopseudomonas palustris|Rep: Putative
           uncharacterized protein precursor - Rhodopseudomonas
           palustris
          Length = 431

 Score = 32.3 bits (70), Expect = 9.4
 Identities = 14/39 (35%), Positives = 25/39 (64%)
 Frame = +1

Query: 64  ASPAASS*RNNTVRMTSFNTLWTMSNSRSISRNKNYTSK 180
           A+PA ++ ++NTV  TS N  W+ S++ ++  N + T K
Sbjct: 211 AAPAPAAEQSNTVTPTSMNDRWSDSSAGNVQANTDVTDK 249


>UniRef50_A0YAG6 Cluster: Putative uncharacterized protein; n=1;
           marine gamma proteobacterium HTCC2143|Rep: Putative
           uncharacterized protein - marine gamma proteobacterium
           HTCC2143
          Length = 448

 Score = 32.3 bits (70), Expect = 9.4
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = +3

Query: 399 DSVVWKNIEMASGPNSPVQTEQDIEDIFGDSLKDV 503
           D  +W NI +A G ++P   +  I D+ GD   DV
Sbjct: 84  DPDIWTNITIAEGTDAPAPEDAAIADVNGDGFPDV 118


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 502,398,396
Number of Sequences: 1657284
Number of extensions: 8275803
Number of successful extensions: 22422
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 21851
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22419
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 44392209541
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)