Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov11e20
(607 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_47179| Best HMM Match : Carboxyl_trans (HMM E-Value=0) 89 3e-18
SB_36462| Best HMM Match : efhand (HMM E-Value=5.8e-09) 80 2e-16
SB_49196| Best HMM Match : efhand (HMM E-Value=3.4e-39) 46 2e-05
SB_44952| Best HMM Match : efhand (HMM E-Value=3.4e-39) 46 2e-05
SB_21204| Best HMM Match : efhand (HMM E-Value=1.7e-21) 45 4e-05
SB_27027| Best HMM Match : efhand (HMM E-Value=8.7e-08) 44 1e-04
SB_3425| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_36414| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 3e-04
SB_7126| Best HMM Match : efhand (HMM E-Value=2e-26) 42 5e-04
SB_53415| Best HMM Match : efhand (HMM E-Value=2.7e-12) 40 0.002
SB_37671| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.004
SB_21457| Best HMM Match : efhand (HMM E-Value=1.7e-29) 38 0.005
SB_5690| Best HMM Match : efhand (HMM E-Value=7.39998e-41) 37 0.011
SB_18942| Best HMM Match : efhand (HMM E-Value=1.7e-30) 37 0.015
SB_28695| Best HMM Match : Ras (HMM E-Value=0) 37 0.015
SB_8171| Best HMM Match : efhand (HMM E-Value=6.6e-12) 36 0.019
SB_58660| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.044
SB_42269| Best HMM Match : efhand (HMM E-Value=4.8e-05) 35 0.044
SB_38608| Best HMM Match : Peptidase_C2 (HMM E-Value=0) 35 0.044
SB_16925| Best HMM Match : efhand (HMM E-Value=3e-22) 35 0.044
SB_6736| Best HMM Match : efhand (HMM E-Value=2.6e-21) 35 0.059
SB_23574| Best HMM Match : efhand (HMM E-Value=2e-05) 34 0.10
SB_37032| Best HMM Match : efhand (HMM E-Value=4.7e-35) 33 0.14
SB_18908| Best HMM Match : efhand (HMM E-Value=5.5e-31) 33 0.24
SB_8146| Best HMM Match : efhand (HMM E-Value=1.2e-16) 32 0.31
SB_644| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.31
SB_57699| Best HMM Match : efhand (HMM E-Value=1e-08) 32 0.41
SB_43954| Best HMM Match : efhand (HMM E-Value=4.3e-23) 31 0.55
SB_50692| Best HMM Match : efhand (HMM E-Value=1.5e-15) 31 0.96
SB_10944| Best HMM Match : efhand (HMM E-Value=7.4e-24) 30 1.7
SB_45593| Best HMM Match : ArfGap (HMM E-Value=3.3e-37) 29 2.2
SB_46583| Best HMM Match : Hus1 (HMM E-Value=0) 29 2.9
SB_31141| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_14640| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_27337| Best HMM Match : efhand (HMM E-Value=2.9e-21) 28 5.1
SB_57618| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_49134| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_38969| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_37793| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_22989| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_18984| Best HMM Match : DNA_topoisoIV (HMM E-Value=0) 28 6.7
SB_20632| Best HMM Match : Cu_bind_like (HMM E-Value=0.51) 28 6.7
SB_30167| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.9
SB_13634| Best HMM Match : efhand (HMM E-Value=2e-24) 27 8.9
>SB_47179| Best HMM Match : Carboxyl_trans (HMM E-Value=0)
Length = 622
Score = 88.6 bits (210), Expect = 3e-18
Identities = 46/105 (43%), Positives = 61/105 (58%), Gaps = 2/105 (1%)
Frame = +3
Query: 288 GYPGQAAYGGMPPGQLEIGHGPYPSIGVGGT--ITPQVQQWFRAVDKDQSGFITSTELRS 461
GYP Q PPG G+G PS G P + WF AVD+D+SG I+S EL
Sbjct: 427 GYPPQQP--SYPPG----GYGGPPSAPYGAPPGADPTLWNWFIAVDRDRSGAISSDELEQ 480
Query: 462 ALVNAQGQTFSETACNLMIGMFDKDRNGQINLDEFDKLYTYVNQW 596
AL+N F++ C LMIG+FD D++G IN EF +L++Y+ QW
Sbjct: 481 ALMNNNWSRFNQETCRLMIGLFDHDQSGTINFQEFQQLWSYIQQW 525
>SB_36462| Best HMM Match : efhand (HMM E-Value=5.8e-09)
Length = 402
Score = 80.2 bits (189), Expect(2) = 2e-16
Identities = 46/100 (46%), Positives = 61/100 (61%), Gaps = 13/100 (13%)
Frame = +3
Query: 276 AYNSGYPGQAAYGGMPPGQ--LEIG-HGP----YP---SIGVGGT---ITPQVQQWFRAV 416
+YN GY G YG P G + G +GP YP S GG + P + QWF+AV
Sbjct: 51 SYNPGYGGHQGYGQQPHGYGGQQYGQYGPPPSAYPGQFSAPTGGPPPGVDPSLWQWFQAV 110
Query: 417 DKDQSGFITSTELRSALVNAQGQTFSETACNLMIGMFDKD 536
D+D++G IT++ELR+ALVN+ F+E C +MIGMFDKD
Sbjct: 111 DQDRTGKITASELRAALVNSNWSQFNEETCRMMIGMFDKD 150
Score = 33.9 bits (74), Expect = 0.10
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = +3
Query: 417 DKDQSGFITSTELRSALVNAQGQTFSETACNLMIGMFDKDRNGQINLDEF 566
D+D+SG I + EL +A + G S CNL + FD+ + D+F
Sbjct: 192 DRDRSGTIDAGELNTAF-STFGYRLSPQFCNLCVQKFDRSDRNTMKFDDF 240
Score = 22.6 bits (46), Expect(2) = 2e-16
Identities = 8/24 (33%), Positives = 15/24 (62%)
Frame = +3
Query: 510 LMIGMFDKDRNGQINLDEFDKLYT 581
+ I FD+DR+G I+ E + ++
Sbjct: 186 ICISSFDRDRSGTIDAGELNTAFS 209
>SB_49196| Best HMM Match : efhand (HMM E-Value=3.4e-39)
Length = 659
Score = 46.0 bits (104), Expect = 2e-05
Identities = 22/58 (37%), Positives = 36/58 (62%)
Frame = +3
Query: 390 QVQQWFRAVDKDQSGFITSTELRSALVNAQGQTFSETACNLMIGMFDKDRNGQINLDE 563
++++ FR DKD +GFI++ ELR + N G+ ++ + MI D D +GQ+N DE
Sbjct: 74 EIREAFRVFDKDGNGFISAAELRHVMTNL-GEKLTDEEVDEMIREADIDGDGQVNYDE 130
>SB_44952| Best HMM Match : efhand (HMM E-Value=3.4e-39)
Length = 250
Score = 46.0 bits (104), Expect = 2e-05
Identities = 22/58 (37%), Positives = 36/58 (62%)
Frame = +3
Query: 390 QVQQWFRAVDKDQSGFITSTELRSALVNAQGQTFSETACNLMIGMFDKDRNGQINLDE 563
++++ FR DKD +GFI++ ELR + N G+ ++ + MI D D +GQ+N DE
Sbjct: 74 EIREAFRVFDKDGNGFISAAELRHVMTNL-GEKLTDEEVDEMIREADIDGDGQVNYDE 130
>SB_21204| Best HMM Match : efhand (HMM E-Value=1.7e-21)
Length = 202
Score = 45.2 bits (102), Expect = 4e-05
Identities = 26/65 (40%), Positives = 35/65 (53%)
Frame = +3
Query: 405 FRAVDKDQSGFITSTELRSALVNAQGQTFSETACNLMIGMFDKDRNGQINLDEFDKLYTY 584
F DKD SG IT+ EL ++ + G+ +E MI D D NG +N DEF KL
Sbjct: 56 FEHFDKDSSGSITTREL-GGIMRSLGENPTEIELQDMINSVDCDGNGLMNFDEFVKLMIT 114
Query: 585 VNQWL 599
NQ++
Sbjct: 115 KNQFM 119
>SB_27027| Best HMM Match : efhand (HMM E-Value=8.7e-08)
Length = 103
Score = 43.6 bits (98), Expect = 1e-04
Identities = 20/50 (40%), Positives = 34/50 (68%)
Frame = +3
Query: 417 DKDQSGFITSTELRSALVNAQGQTFSETACNLMIGMFDKDRNGQINLDEF 566
D+D SG+I+ ELR + ++ G+ SE +I MFDK+++GQ++ +EF
Sbjct: 4 DRDGSGYISPEELRYVVCHS-GEKLSEDEARELIDMFDKNKDGQLSWEEF 52
>SB_3425| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 304
Score = 42.7 bits (96), Expect = 2e-04
Identities = 20/58 (34%), Positives = 35/58 (60%)
Frame = +3
Query: 393 VQQWFRAVDKDQSGFITSTELRSALVNAQGQTFSETACNLMIGMFDKDRNGQINLDEF 566
++Q FR D++ G+I++ ELR A V G ++ +IGM D+D +G++ +EF
Sbjct: 219 LRQAFRVFDRNGDGYISAEELRVA-VTTLGDALTQDEAEELIGMLDQDGDGKLGYEEF 275
>SB_36414| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 299
Score = 42.3 bits (95), Expect = 3e-04
Identities = 20/57 (35%), Positives = 35/57 (61%)
Frame = +3
Query: 390 QVQQWFRAVDKDQSGFITSTELRSALVNAQGQTFSETACNLMIGMFDKDRNGQINLD 560
++++ FR DKD +GFI++ ELR + N G+ ++ + MI D D +GQ+N +
Sbjct: 85 EIREAFRVFDKDGNGFISAAELRHVMTNL-GEKLTDEEVDEMIREADIDGDGQVNYE 140
>SB_7126| Best HMM Match : efhand (HMM E-Value=2e-26)
Length = 213
Score = 41.5 bits (93), Expect = 5e-04
Identities = 20/57 (35%), Positives = 34/57 (59%)
Frame = +3
Query: 390 QVQQWFRAVDKDQSGFITSTELRSALVNAQGQTFSETACNLMIGMFDKDRNGQINLD 560
++++ FR DKD +GFI++ ELR + N G+ ++ MI D D +GQ+N +
Sbjct: 49 EIREAFRVFDKDGNGFISAAELRHVMTNL-GEKLTDEEVEEMIMEADIDGDGQVNYE 104
>SB_53415| Best HMM Match : efhand (HMM E-Value=2.7e-12)
Length = 923
Score = 39.9 bits (89), Expect = 0.002
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = +3
Query: 519 GMFDKDRNGQINLDEFDKLYTYVNQW 596
GMFD+D NG IN EF L+ Y+ W
Sbjct: 20 GMFDRDNNGTINFQEFSSLWKYITDW 45
Score = 34.3 bits (75), Expect = 0.078
Identities = 19/57 (33%), Positives = 29/57 (50%)
Frame = +3
Query: 396 QQWFRAVDKDQSGFITSTELRSALVNAQGQTFSETACNLMIGMFDKDRNGQINLDEF 566
Q FR D+D SG I EL++ G S+ +++I FD+ G +N D+F
Sbjct: 46 QTTFRNYDRDSSGTIDKNELQN------GYRLSDKFYSILIKKFDRSGRGVVNFDDF 96
>SB_37671| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 708
Score = 38.7 bits (86), Expect = 0.004
Identities = 18/55 (32%), Positives = 32/55 (58%)
Frame = +3
Query: 414 VDKDQSGFITSTELRSALVNAQGQTFSETACNLMIGMFDKDRNGQINLDEFDKLY 578
VD D+ GF+T ELR L+N + +T N + D +++G+++ +EF K +
Sbjct: 567 VDLDKDGFVTEDELRLRLLNT-SRKHRKTEVNSTVTFHDDNKDGKVSWEEFKKAH 620
>SB_21457| Best HMM Match : efhand (HMM E-Value=1.7e-29)
Length = 420
Score = 38.3 bits (85), Expect = 0.005
Identities = 21/59 (35%), Positives = 35/59 (59%)
Frame = +3
Query: 390 QVQQWFRAVDKDQSGFITSTELRSALVNAQGQTFSETACNLMIGMFDKDRNGQINLDEF 566
++++ F DKD G I+S+EL + ++ + GQ +E MI D+D NG+I+ EF
Sbjct: 291 ELKEAFALFDKDGGGSISSSEL-AHVMRSLGQNPTEQELKDMIAEVDQDDNGEIDFPEF 348
>SB_5690| Best HMM Match : efhand (HMM E-Value=7.39998e-41)
Length = 153
Score = 37.1 bits (82), Expect = 0.011
Identities = 20/54 (37%), Positives = 30/54 (55%)
Frame = +3
Query: 405 FRAVDKDQSGFITSTELRSALVNAQGQTFSETACNLMIGMFDKDRNGQINLDEF 566
F DKD SG I++ EL ++ + GQ S+ MI D D NG+++ +EF
Sbjct: 6 FSLFDKDGSGTISNEELE-VVMKSLGQNPSDEELQQMIQEVDADGNGEVDFEEF 58
>SB_18942| Best HMM Match : efhand (HMM E-Value=1.7e-30)
Length = 233
Score = 36.7 bits (81), Expect = 0.015
Identities = 24/73 (32%), Positives = 34/73 (46%)
Frame = +3
Query: 372 GGTITPQVQQWFRAVDKDQSGFITSTELRSALVNAQGQTFSETACNLMIGMFDKDRNGQI 551
G + ++ Q F+ D DQSG IT L+ + G +ET MI DKD + I
Sbjct: 159 GRDVHDEIVQGFKMFDTDQSGRITLENLKQ-VSRMCGVKLNETELKEMILEADKDGDSSI 217
Query: 552 NLDEFDKLYTYVN 590
+ DEF + N
Sbjct: 218 DQDEFINMMLKTN 230
>SB_28695| Best HMM Match : Ras (HMM E-Value=0)
Length = 1058
Score = 36.7 bits (81), Expect = 0.015
Identities = 19/57 (33%), Positives = 31/57 (54%)
Frame = +3
Query: 396 QQWFRAVDKDQSGFITSTELRSALVNAQGQTFSETACNLMIGMFDKDRNGQINLDEF 566
++ F D D+ G+IT T+L V+ F + +L+ D+D NG++ LDEF
Sbjct: 426 RELFYLCDSDRKGYITKTDLHRVAVDLS-LNFDQL--DLIFNQLDQDGNGRLTLDEF 479
Score = 29.9 bits (64), Expect = 1.7
Identities = 14/63 (22%), Positives = 28/63 (44%)
Frame = +3
Query: 378 TITPQVQQWFRAVDKDQSGFITSTELRSALVNAQGQTFSETACNLMIGMFDKDRNGQINL 557
T+ + + F D++ G+IT +L + + + + D D+NG + L
Sbjct: 336 TLRERATELFSLCDQESKGYITQNDLVAVITDLE-LPLDAAQVQQAFSKLDDDQNGYLTL 394
Query: 558 DEF 566
+EF
Sbjct: 395 EEF 397
>SB_8171| Best HMM Match : efhand (HMM E-Value=6.6e-12)
Length = 77
Score = 36.3 bits (80), Expect = 0.019
Identities = 21/58 (36%), Positives = 30/58 (51%)
Frame = +3
Query: 393 VQQWFRAVDKDQSGFITSTELRSALVNAQGQTFSETACNLMIGMFDKDRNGQINLDEF 566
+++ F D D +G IT EL A+ +A G +I +DKD+NG I DEF
Sbjct: 19 LKESFDEFDVDHNGHITVKEL-GAVFSAAGAEVPGYKVREVISEYDKDQNGTIEFDEF 75
>SB_58660| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 960
Score = 35.1 bits (77), Expect = 0.044
Identities = 18/58 (31%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Frame = +3
Query: 396 QQWFRAVDKDQSGFITSTELRSALVNAQGQTFSETACNLMIGMFD-KDRNGQINLDEF 566
+ +F DKD+ GFI EL AL + Q+ + N ++GM + ++ + +I+L +F
Sbjct: 315 RHYFTKNDKDKDGFINHRELLKALRDLYAQSITVEQVNAILGMLEIEEMSKKIDLSKF 372
>SB_42269| Best HMM Match : efhand (HMM E-Value=4.8e-05)
Length = 901
Score = 35.1 bits (77), Expect = 0.044
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Frame = +3
Query: 369 VGGTITPQVQQWFRAVDKDQSGFITSTELRSALVNAQGQTFSETACNLMIG--MFDKDRN 542
+G I ++ +R D D G I+ TE+ LV+ FSE M+ DK+ N
Sbjct: 181 IGMKIEATTEETYREWDYDGDGVISVTEIMHNLVDLSDLYFSEDDVKTMLRDLNIDKNGN 240
Query: 543 GQINLDEF 566
G ++L+EF
Sbjct: 241 GVMDLNEF 248
>SB_38608| Best HMM Match : Peptidase_C2 (HMM E-Value=0)
Length = 842
Score = 35.1 bits (77), Expect = 0.044
Identities = 20/62 (32%), Positives = 36/62 (58%)
Frame = +3
Query: 405 FRAVDKDQSGFITSTELRSALVNAQGQTFSETACNLMIGMFDKDRNGQINLDEFDKLYTY 584
F+ D+D+SG + + ELR AL A G T S + + + +G++N+D+F ++ T
Sbjct: 716 FQVFDEDKSGEMDTYELRGALKEA-GFTLSNSVLYAVSARYSTG-DGKVNVDDFMEILTR 773
Query: 585 VN 590
+N
Sbjct: 774 LN 775
>SB_16925| Best HMM Match : efhand (HMM E-Value=3e-22)
Length = 132
Score = 35.1 bits (77), Expect = 0.044
Identities = 21/62 (33%), Positives = 33/62 (53%)
Frame = +3
Query: 390 QVQQWFRAVDKDQSGFITSTELRSALVNAQGQTFSETACNLMIGMFDKDRNGQINLDEFD 569
+++ F DKD SG I + ELR ++ G+ S+ MI DKD +G+I +F
Sbjct: 4 EMRDVFSMFDKDNSGSIDTDELRD-VMRELGENPSDKEIQDMIADADKDGSGEIRFAQFM 62
Query: 570 KL 575
+L
Sbjct: 63 QL 64
>SB_6736| Best HMM Match : efhand (HMM E-Value=2.6e-21)
Length = 198
Score = 34.7 bits (76), Expect = 0.059
Identities = 18/62 (29%), Positives = 35/62 (56%)
Frame = +3
Query: 381 ITPQVQQWFRAVDKDQSGFITSTELRSALVNAQGQTFSETACNLMIGMFDKDRNGQINLD 560
+T ++++ F+ +D+D SG+I E+ +AL S ++ GM D + + +I+ D
Sbjct: 66 VTLRLEKIFQEIDEDNSGYIDHNEISNALKKLDINLPSRQIDGILKGM-DLNNDNRIDFD 124
Query: 561 EF 566
EF
Sbjct: 125 EF 126
>SB_23574| Best HMM Match : efhand (HMM E-Value=2e-05)
Length = 69
Score = 33.9 bits (74), Expect = 0.10
Identities = 17/54 (31%), Positives = 29/54 (53%)
Frame = +3
Query: 405 FRAVDKDQSGFITSTELRSALVNAQGQTFSETACNLMIGMFDKDRNGQINLDEF 566
F+ D++ +G I + ELR L + + E NLM+G +D GQ+ ++F
Sbjct: 11 FKVFDRNGNGLIGAAELRHLLASLGDKLSDEEVDNLMVGF--EDNQGQVFYEDF 62
>SB_37032| Best HMM Match : efhand (HMM E-Value=4.7e-35)
Length = 552
Score = 33.5 bits (73), Expect = 0.14
Identities = 18/59 (30%), Positives = 31/59 (52%)
Frame = +3
Query: 390 QVQQWFRAVDKDQSGFITSTELRSALVNAQGQTFSETACNLMIGMFDKDRNGQINLDEF 566
++++ FRA+DKD SG + R L + E + + +DKD G+I+ +EF
Sbjct: 489 EMRRAFRAIDKDGSGLCNPLDFRQMLKRFKIDLNEEEFFH-VYSFYDKDMTGKISYNEF 546
>SB_18908| Best HMM Match : efhand (HMM E-Value=5.5e-31)
Length = 156
Score = 32.7 bits (71), Expect = 0.24
Identities = 20/66 (30%), Positives = 32/66 (48%)
Frame = +3
Query: 393 VQQWFRAVDKDQSGFITSTELRSALVNAQGQTFSETACNLMIGMFDKDRNGQINLDEFDK 572
V+ F DKD SG + TE+ L G + + + DKD +G ++ DEF
Sbjct: 16 VKSLFTKYDKDGSGRLQKTEMMELLKVDLG--LDDKQAETFLLLVDKDGSGSVSFDEF-- 71
Query: 573 LYTYVN 590
YT+++
Sbjct: 72 -YTWIH 76
Score = 31.5 bits (68), Expect = 0.55
Identities = 18/56 (32%), Positives = 28/56 (50%)
Frame = +3
Query: 399 QWFRAVDKDQSGFITSTELRSALVNAQGQTFSETACNLMIGMFDKDRNGQINLDEF 566
+ F+ DKD SG I E + + +T ++ + + DKD NGQI+ EF
Sbjct: 98 EMFKKYDKDASGSIDREEFKQLM----HETGNKVNIDKALKKLDKDGNGQISFTEF 149
>SB_8146| Best HMM Match : efhand (HMM E-Value=1.2e-16)
Length = 285
Score = 32.3 bits (70), Expect = 0.31
Identities = 16/57 (28%), Positives = 31/57 (54%)
Frame = +3
Query: 384 TPQVQQWFRAVDKDQSGFITSTELRSALVNAQGQTFSETACNLMIGMFDKDRNGQIN 554
T +++ F+++DKD GFIT +L+ + + S+ MI D D +G+++
Sbjct: 72 TQEIRMAFKSMDKDGDGFITFGDLKKTMQECD-ENLSDDDLKRMIIDADLDEDGRVS 127
>SB_644| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 350
Score = 32.3 bits (70), Expect = 0.31
Identities = 17/64 (26%), Positives = 29/64 (45%)
Frame = +3
Query: 390 QVQQWFRAVDKDQSGFITSTELRSALVNAQGQTFSETACNLMIGMFDKDRNGQINLDEFD 569
+++ + DKD SG I E + + +E+ +FDKD NG I+ E
Sbjct: 52 ELKAMIKQADKDGSGDIDLPEFIELMASKSKNDTTESDLREAFSLFDKDGNGLISAQEMK 111
Query: 570 KLYT 581
++T
Sbjct: 112 FVFT 115
Score = 30.7 bits (66), Expect = 0.96
Identities = 17/64 (26%), Positives = 28/64 (43%)
Frame = +3
Query: 390 QVQQWFRAVDKDQSGFITSTELRSALVNAQGQTFSETACNLMIGMFDKDRNGQINLDEFD 569
+++ + DKD SG I E + + +E+ +FDKD NG I+ E
Sbjct: 181 ELKAMIKQADKDGSGDIDLPEFIELMASKSKNDTTESDLREAFSLFDKDGNGLISAQEMK 240
Query: 570 KLYT 581
+ T
Sbjct: 241 FVLT 244
>SB_57699| Best HMM Match : efhand (HMM E-Value=1e-08)
Length = 676
Score = 31.9 bits (69), Expect = 0.41
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = +3
Query: 405 FRAVDKDQSGFITSTELRSALVNAQGQTFSETACNLMIGMFDKDRNGQINLDEF 566
F DKD S +T E + L G S+ ++I + D+D +G+I+ EF
Sbjct: 611 FNQFDKDNSLSVTRDEFYTGLKGI-GVPMSDKDLTMLIDLLDEDGDGEIDFSEF 663
>SB_43954| Best HMM Match : efhand (HMM E-Value=4.3e-23)
Length = 308
Score = 31.5 bits (68), Expect = 0.55
Identities = 18/54 (33%), Positives = 26/54 (48%)
Frame = +3
Query: 405 FRAVDKDQSGFITSTELRSALVNAQGQTFSETACNLMIGMFDKDRNGQINLDEF 566
F A D ++ GF+T E+ L SE I D+D++G I+L EF
Sbjct: 155 FDAADTNKDGFLTREEMAIFLHPESSPEMSEVHILETIEDIDRDKDGLISLKEF 208
>SB_50692| Best HMM Match : efhand (HMM E-Value=1.5e-15)
Length = 150
Score = 30.7 bits (66), Expect = 0.96
Identities = 18/53 (33%), Positives = 26/53 (49%)
Frame = +3
Query: 408 RAVDKDQSGFITSTELRSALVNAQGQTFSETACNLMIGMFDKDRNGQINLDEF 566
R D D SG I ELR L + +L+ G+ +D+ GQI+ +EF
Sbjct: 93 RVFDNDGSGMINEGELRHILTTLGEKLTDSEVDSLIQGL--EDKQGQIDCEEF 143
>SB_10944| Best HMM Match : efhand (HMM E-Value=7.4e-24)
Length = 127
Score = 29.9 bits (64), Expect = 1.7
Identities = 16/59 (27%), Positives = 31/59 (52%)
Frame = +3
Query: 390 QVQQWFRAVDKDQSGFITSTELRSALVNAQGQTFSETACNLMIGMFDKDRNGQINLDEF 566
++ + F+ D D++G I+ L+ + G+ ++ MI D+D +G+IN EF
Sbjct: 60 EILKAFKLFDDDETGKISFKNLKR-VAKELGENLTDEELQEMIDEADRDGDGEINEAEF 117
>SB_45593| Best HMM Match : ArfGap (HMM E-Value=3.3e-37)
Length = 732
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/47 (31%), Positives = 22/47 (46%)
Frame = +3
Query: 252 TFSETLQMAYNSGYPGQAAYGGMPPGQLEIGHGPYPSIGVGGTITPQ 392
+F + + +SG+ GQ G P GQ HG G+GG + Q
Sbjct: 608 SFGQAAPTSQSSGFGGQGGMFGTPGGQQSGFHGGIGGGGMGGGFSGQ 654
>SB_46583| Best HMM Match : Hus1 (HMM E-Value=0)
Length = 646
Score = 29.1 bits (62), Expect = 2.9
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +3
Query: 408 RAVDKDQSGFITSTELRSALVNAQGQTFSETACNLMIGMFDKDRNGQINLD 560
R D+D +G + + ELRS L++ G+ S+ + D D +G IN +
Sbjct: 596 RVFDRDGTGTVLAAELRSVLMSL-GEKLSDEEVTTLFAPVD-DSSGHINYE 644
>SB_31141| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 189
Score = 28.7 bits (61), Expect = 3.9
Identities = 17/56 (30%), Positives = 29/56 (51%)
Frame = +3
Query: 405 FRAVDKDQSGFITSTELRSALVNAQGQTFSETACNLMIGMFDKDRNGQINLDEFDK 572
F D D SG+I EL +A+ + + E + D DR+G+I+++EF +
Sbjct: 14 FGTCDLDGSGYIDKQEL-AAVCDLDAEDLGE-----VFNKLDADRDGRISIEEFSE 63
>SB_14640| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 321
Score = 28.7 bits (61), Expect = 3.9
Identities = 16/57 (28%), Positives = 28/57 (49%)
Frame = +3
Query: 405 FRAVDKDQSGFITSTELRSALVNAQGQTFSETACNLMIGMFDKDRNGQINLDEFDKL 575
F D D G+I ++ELR L + + E M+ + D++ ++ L EF +L
Sbjct: 227 FHVFDSDDKGYIEASELRDLLCGME-KKIPEDELQDMLRYYGLDKDRRVLLMEFAEL 282
>SB_27337| Best HMM Match : efhand (HMM E-Value=2.9e-21)
Length = 172
Score = 28.3 bits (60), Expect = 5.1
Identities = 14/54 (25%), Positives = 25/54 (46%)
Frame = +3
Query: 405 FRAVDKDQSGFITSTELRSALVNAQGQTFSETACNLMIGMFDKDRNGQINLDEF 566
FR D D + + E R + + G ++ + FDKD +G ++ +EF
Sbjct: 44 FRIFDDDGNRALNIDEFRKGMQDF-GTKLTDDEVKQLFAQFDKDGSGSLDFEEF 96
>SB_57618| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 162
Score = 27.9 bits (59), Expect = 6.7
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 4/48 (8%)
Frame = +3
Query: 336 EIGHGPYPSIGVGGTITPQVQQWFRA----VDKDQSGFITSTELRSAL 467
E GHG P GVGG + R+ +D S F+ +TE +S++
Sbjct: 96 EAGHGKGPCDGVGGAAKRMADEAVRSGKVVIDDAHSFFVWATEYQSSV 143
>SB_49134| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1060
Score = 27.9 bits (59), Expect = 6.7
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 4/48 (8%)
Frame = +3
Query: 336 EIGHGPYPSIGVGGTITPQVQQWFRA----VDKDQSGFITSTELRSAL 467
E GHG P GVGG + R+ +D S F+ +TE +S++
Sbjct: 917 EAGHGKGPCDGVGGAAKRMADEAVRSGKVVIDDAHSFFVWATEYQSSV 964
>SB_38969| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 200
Score = 27.9 bits (59), Expect = 6.7
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 4/48 (8%)
Frame = +3
Query: 336 EIGHGPYPSIGVGGTITPQVQQWFRA----VDKDQSGFITSTELRSAL 467
E GHG P GVGG + R+ +D S F+ +TE +S++
Sbjct: 32 EAGHGKGPCDGVGGAAKRMADEAVRSGKVVIDDAHSFFVWATEYQSSV 79
>SB_37793| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 698
Score = 27.9 bits (59), Expect = 6.7
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 4/48 (8%)
Frame = +3
Query: 336 EIGHGPYPSIGVGGTITPQVQQWFRA----VDKDQSGFITSTELRSAL 467
E GHG P GVGG + R+ +D S F+ +TE +S++
Sbjct: 470 EAGHGKGPCDGVGGAAKRMADEAVRSGKVVIDDAHSFFVWATEYQSSV 517
>SB_22989| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 278
Score = 27.9 bits (59), Expect = 6.7
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 4/48 (8%)
Frame = +3
Query: 336 EIGHGPYPSIGVGGTITPQVQQWFRA----VDKDQSGFITSTELRSAL 467
E GHG P GVGG + R+ +D S F+ +TE +S++
Sbjct: 66 EAGHGKGPCDGVGGAAKRMADEAVRSGKVVIDDAHSFFVWATEYQSSV 113
>SB_18984| Best HMM Match : DNA_topoisoIV (HMM E-Value=0)
Length = 1182
Score = 27.9 bits (59), Expect = 6.7
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 4/48 (8%)
Frame = +3
Query: 336 EIGHGPYPSIGVGGTITPQVQQWFRA----VDKDQSGFITSTELRSAL 467
E GHG P GVGG + R+ +D S F+ +TE +S++
Sbjct: 176 EAGHGKGPCDGVGGAAKRMADEAVRSGKVVIDDAHSFFVWATEYQSSV 223
>SB_20632| Best HMM Match : Cu_bind_like (HMM E-Value=0.51)
Length = 388
Score = 27.9 bits (59), Expect = 6.7
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 4/48 (8%)
Frame = +3
Query: 336 EIGHGPYPSIGVGGTITPQVQQWFRA----VDKDQSGFITSTELRSAL 467
E GHG P GVGG + R+ +D S F+ +TE +S++
Sbjct: 176 EAGHGKGPCDGVGGAAKRMADEAVRSGKVVIDDAHSFFVWATEYQSSV 223
>SB_30167| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 81
Score = 27.5 bits (58), Expect = 8.9
Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Frame = +3
Query: 405 FRAVDKDQSGFITSTELRSALVNAQGQTFSETACNLMIGMFDKDRNGQINLDE-FDKL 575
FR D D G+I S E+R L G+ E N ++ R +I +E DKL
Sbjct: 19 FRTFDGDDKGYIFSNEIRYVL-RHMGENIPEHDINDILKDASHGRKRKITFEETIDKL 75
>SB_13634| Best HMM Match : efhand (HMM E-Value=2e-24)
Length = 176
Score = 27.5 bits (58), Expect = 8.9
Identities = 18/54 (33%), Positives = 27/54 (50%)
Frame = +3
Query: 405 FRAVDKDQSGFITSTELRSALVNAQGQTFSETACNLMIGMFDKDRNGQINLDEF 566
FR +D D SG ++ E S L Q + +I +FD D NG+++ EF
Sbjct: 48 FRKLDLDNSGSLSVEEFMS-LPELQQNPLVQR----VITIFDADGNGEVDFKEF 96
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,896,921
Number of Sequences: 59808
Number of extensions: 363705
Number of successful extensions: 977
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 889
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 968
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1475788250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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