Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov11e20
(607 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006676-5|AAK71383.2| 172|Caenorhabditis elegans Hypothetical ... 78 4e-15
AJ132193-1|CAA10601.1| 149|Caenorhabditis elegans calmodulin pr... 48 7e-06
AF016429-2|AAB65364.1| 149|Caenorhabditis elegans Calmodulin pr... 48 7e-06
Z77653-1|CAB01124.1| 218|Caenorhabditis elegans Hypothetical pr... 46 2e-05
X04259-1|CAA27814.1| 161|Caenorhabditis elegans cal-1 protein. 46 2e-05
U70851-8|AAB09131.1| 164|Caenorhabditis elegans Calmodulin rela... 45 4e-05
Z82282-1|CAB05271.1| 182|Caenorhabditis elegans Hypothetical pr... 44 8e-05
Z70034-1|CAA93852.2| 171|Caenorhabditis elegans Hypothetical pr... 43 1e-04
AJ512489-1|CAD54672.1| 171|Caenorhabditis elegans calmodulin-li... 43 1e-04
Z48585-7|CAA88482.1| 160|Caenorhabditis elegans Hypothetical pr... 42 3e-04
AB079299-1|BAB84566.1| 160|Caenorhabditis elegans troponin C pr... 42 3e-04
AC084159-17|AAK39364.1| 116|Caenorhabditis elegans Hypothetical... 40 0.001
Z73906-16|CAA98123.1| 722|Caenorhabditis elegans Hypothetical p... 39 0.002
Z72516-4|CAA96690.1| 722|Caenorhabditis elegans Hypothetical pr... 39 0.002
U40423-5|AAA81454.2| 156|Caenorhabditis elegans Unidentified vi... 38 0.007
AC024205-5|ABA00164.1| 97|Caenorhabditis elegans Hypothetical ... 37 0.010
AF098504-1|AAC67412.1| 364|Caenorhabditis elegans Btb and math ... 34 0.091
Z70267-5|CAA94209.2| 143|Caenorhabditis elegans Hypothetical pr... 33 0.12
U88165-10|AAK21395.1| 161|Caenorhabditis elegans Paralysed arre... 33 0.16
D45896-1|BAA82524.1| 161|Caenorhabditis elegans troponin C prot... 33 0.16
D45895-1|BAA82523.1| 161|Caenorhabditis elegans troponin C prot... 33 0.16
Z77655-5|CAB01132.2| 458|Caenorhabditis elegans Hypothetical pr... 32 0.37
AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily a... 32 0.37
U41625-3|AAA83326.1| 264|Caenorhabditis elegans Hypothetical pr... 31 0.48
U97194-8|AAB52447.3| 1254|Caenorhabditis elegans Prion-like-(q/n... 31 0.64
U88169-4|AAB42239.2| 81|Caenorhabditis elegans Hypothetical pr... 29 1.9
Z78415-7|CAH60759.1| 844|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z78415-5|CAB01670.1| 925|Caenorhabditis elegans Hypothetical pr... 29 2.6
U41030-2|AAA82363.2| 191|Caenorhabditis elegans Neuronal calciu... 29 2.6
L33680-1|AAA85631.1| 191|Caenorhabditis elegans neuronal calciu... 29 2.6
U28740-5|AAA68320.1| 229|Caenorhabditis elegans Hypothetical pr... 28 4.5
U58764-3|AAB00725.1| 122|Caenorhabditis elegans Hypothetical pr... 28 5.9
AF099917-5|AAC68783.2| 219|Caenorhabditis elegans F-box a prote... 27 7.9
AF078783-5|AAC26922.1| 236|Caenorhabditis elegans Hypothetical ... 27 7.9
AC006670-5|AAF39912.2| 356|Caenorhabditis elegans Hypothetical ... 27 7.9
AC006670-4|AAU20843.1| 518|Caenorhabditis elegans Hypothetical ... 27 7.9
>AC006676-5|AAK71383.2| 172|Caenorhabditis elegans Hypothetical
protein M04F3.4 protein.
Length = 172
Score = 78.2 bits (184), Expect = 4e-15
Identities = 35/70 (50%), Positives = 46/70 (65%)
Frame = +3
Query: 387 PQVQQWFRAVDKDQSGFITSTELRSALVNAQGQTFSETACNLMIGMFDKDRNGQINLDEF 566
P +QQ F +VDKD+SG I+S EL++AL N F+ C LMIGMFD + +G IN EF
Sbjct: 6 PNLQQIFSSVDKDRSGQISSDELQTALSNGTWNPFNPETCRLMIGMFDSNGDGAINFQEF 65
Query: 567 DKLYTYVNQW 596
L+ Y+N W
Sbjct: 66 QALWRYINDW 75
Score = 38.7 bits (86), Expect = 0.003
Identities = 21/57 (36%), Positives = 31/57 (54%)
Frame = +3
Query: 405 FRAVDKDQSGFITSTELRSALVNAQGQTFSETACNLMIGMFDKDRNGQINLDEFDKL 575
FR D D SG I +EL +AL G S N+++ FD+ + +IN D+F +L
Sbjct: 79 FRGFDTDGSGNIDKSELTNALTQF-GYRLSPQFYNILMHKFDRSHSNRINFDDFIQL 134
>AJ132193-1|CAA10601.1| 149|Caenorhabditis elegans calmodulin
protein.
Length = 149
Score = 47.6 bits (108), Expect = 7e-06
Identities = 23/64 (35%), Positives = 39/64 (60%)
Frame = +3
Query: 390 QVQQWFRAVDKDQSGFITSTELRSALVNAQGQTFSETACNLMIGMFDKDRNGQINLDEFD 569
++++ FR DKD +GFI++ ELR + N G+ ++ + MI D D +GQ+N +EF
Sbjct: 85 EIREAFRVFDKDGNGFISAAELRHVMTNL-GEKLTDEEVDEMIREADIDGDGQVNYEEFV 143
Query: 570 KLYT 581
+ T
Sbjct: 144 TMMT 147
>AF016429-2|AAB65364.1| 149|Caenorhabditis elegans Calmodulin
protein 1 protein.
Length = 149
Score = 47.6 bits (108), Expect = 7e-06
Identities = 23/64 (35%), Positives = 39/64 (60%)
Frame = +3
Query: 390 QVQQWFRAVDKDQSGFITSTELRSALVNAQGQTFSETACNLMIGMFDKDRNGQINLDEFD 569
++++ FR DKD +GFI++ ELR + N G+ ++ + MI D D +GQ+N +EF
Sbjct: 85 EIREAFRVFDKDGNGFISAAELRHVMTNL-GEKLTDEEVDEMIREADIDGDGQVNYEEFV 143
Query: 570 KLYT 581
+ T
Sbjct: 144 TMMT 147
>Z77653-1|CAB01124.1| 218|Caenorhabditis elegans Hypothetical
protein C13C12.1 protein.
Length = 218
Score = 46.0 bits (104), Expect = 2e-05
Identities = 25/66 (37%), Positives = 39/66 (59%)
Frame = +3
Query: 378 TITPQVQQWFRAVDKDQSGFITSTELRSALVNAQGQTFSETACNLMIGMFDKDRNGQINL 557
T + +++ FR DKD +G IT+ E R +V+ G FSE + MI D D +G+I+
Sbjct: 150 TDSEMIREAFRVFDKDGNGVITAQEFRYFMVH-MGMQFSEEEVDEMIKEVDVDGDGEIDY 208
Query: 558 DEFDKL 575
+EF K+
Sbjct: 209 EEFVKM 214
>X04259-1|CAA27814.1| 161|Caenorhabditis elegans cal-1 protein.
Length = 161
Score = 46.0 bits (104), Expect = 2e-05
Identities = 25/66 (37%), Positives = 39/66 (59%)
Frame = +3
Query: 378 TITPQVQQWFRAVDKDQSGFITSTELRSALVNAQGQTFSETACNLMIGMFDKDRNGQINL 557
T + +++ FR DKD +G IT+ E R +V+ G FSE + MI D D +G+I+
Sbjct: 93 TDSEMIREAFRVFDKDGNGVITAQEFRYFMVH-MGMQFSEEEVDEMIKEVDVDGDGEIDY 151
Query: 558 DEFDKL 575
+EF K+
Sbjct: 152 EEFVKM 157
>U70851-8|AAB09131.1| 164|Caenorhabditis elegans Calmodulin related
genes protein 3 protein.
Length = 164
Score = 45.2 bits (102), Expect = 4e-05
Identities = 21/68 (30%), Positives = 39/68 (57%)
Frame = +3
Query: 378 TITPQVQQWFRAVDKDQSGFITSTELRSALVNAQGQTFSETACNLMIGMFDKDRNGQINL 557
T + +++ F+ D+D +G IT+ E + ++N G F E M+ D D NG+I+
Sbjct: 98 TDSEMIREAFKIFDRDGNGVITANEFKLFMIN-MGMCFDEVEVEEMMNEVDCDGNGEIDY 156
Query: 558 DEFDKLYT 581
+EF K+++
Sbjct: 157 EEFVKIFS 164
>Z82282-1|CAB05271.1| 182|Caenorhabditis elegans Hypothetical
protein T07G12.1 protein.
Length = 182
Score = 44.0 bits (99), Expect = 8e-05
Identities = 22/54 (40%), Positives = 33/54 (61%)
Frame = +3
Query: 405 FRAVDKDQSGFITSTELRSALVNAQGQTFSETACNLMIGMFDKDRNGQINLDEF 566
F+ DKD +G+IT+ E + + G+ FSE + +I DKD + QI+LDEF
Sbjct: 101 FKVFDKDGNGYITAQEFKH-FMTTMGERFSEEEVDEIIREVDKDGDEQIDLDEF 153
>Z70034-1|CAA93852.2| 171|Caenorhabditis elegans Hypothetical
protein C18E9.1 protein.
Length = 171
Score = 43.2 bits (97), Expect = 1e-04
Identities = 21/63 (33%), Positives = 37/63 (58%)
Frame = +3
Query: 393 VQQWFRAVDKDQSGFITSTELRSALVNAQGQTFSETACNLMIGMFDKDRNGQINLDEFDK 572
+++ FR D+D +GFIT+ E R + + G FS+ + +I D D +GQI+ +EF
Sbjct: 109 IREAFRVFDRDGNGFITADEFRYFMTH-MGDQFSDQEVDEIIAEIDIDGDGQIDYEEFAS 167
Query: 573 LYT 581
++
Sbjct: 168 TFS 170
>AJ512489-1|CAD54672.1| 171|Caenorhabditis elegans calmodulin-like
protein protein.
Length = 171
Score = 43.2 bits (97), Expect = 1e-04
Identities = 21/63 (33%), Positives = 37/63 (58%)
Frame = +3
Query: 393 VQQWFRAVDKDQSGFITSTELRSALVNAQGQTFSETACNLMIGMFDKDRNGQINLDEFDK 572
+++ FR D+D +GFIT+ E R + + G FS+ + +I D D +GQI+ +EF
Sbjct: 109 IREAFRVFDRDGNGFITADEFRYFMTH-MGDQFSDQEVDEIIAEIDIDGDGQIDYEEFAS 167
Query: 573 LYT 581
++
Sbjct: 168 TFS 170
>Z48585-7|CAA88482.1| 160|Caenorhabditis elegans Hypothetical
protein ZK673.7 protein.
Length = 160
Score = 41.9 bits (94), Expect = 3e-04
Identities = 19/59 (32%), Positives = 33/59 (55%)
Frame = +3
Query: 390 QVQQWFRAVDKDQSGFITSTELRSALVNAQGQTFSETACNLMIGMFDKDRNGQINLDEF 566
Q +++F DK+ G+I +T++ ++ GQ F E +I FD D +G+I +EF
Sbjct: 19 QFRKYFNMFDKEGKGYIRATQV-GQILRTMGQAFEERDLKQLIKEFDADGSGEIEFEEF 76
Score = 38.7 bits (86), Expect = 0.003
Identities = 19/59 (32%), Positives = 34/59 (57%)
Frame = +3
Query: 390 QVQQWFRAVDKDQSGFITSTELRSALVNAQGQTFSETACNLMIGMFDKDRNGQINLDEF 566
++++ FR DK+ +G+I ++LR ++ A SE + MI D D +G ++ DEF
Sbjct: 96 ELREAFRLYDKEGNGYINVSDLRD-ILRALDDNVSEEELDEMIAEIDADGSGTVDFDEF 153
>AB079299-1|BAB84566.1| 160|Caenorhabditis elegans troponin C
protein.
Length = 160
Score = 41.9 bits (94), Expect = 3e-04
Identities = 19/59 (32%), Positives = 33/59 (55%)
Frame = +3
Query: 390 QVQQWFRAVDKDQSGFITSTELRSALVNAQGQTFSETACNLMIGMFDKDRNGQINLDEF 566
Q +++F DK+ G+I +T++ ++ GQ F E +I FD D +G+I +EF
Sbjct: 19 QFRKYFNMFDKEGKGYIRATQV-GQILRTMGQAFEERDLKQLIKEFDADGSGEIEFEEF 76
Score = 38.7 bits (86), Expect = 0.003
Identities = 19/59 (32%), Positives = 34/59 (57%)
Frame = +3
Query: 390 QVQQWFRAVDKDQSGFITSTELRSALVNAQGQTFSETACNLMIGMFDKDRNGQINLDEF 566
++++ FR DK+ +G+I ++LR ++ A SE + MI D D +G ++ DEF
Sbjct: 96 ELREAFRLYDKEGNGYINVSDLRD-ILRALDDNVSEEELDEMIAEIDADGSGTVDFDEF 153
>AC084159-17|AAK39364.1| 116|Caenorhabditis elegans Hypothetical
protein Y73B3A.12 protein.
Length = 116
Score = 39.9 bits (89), Expect = 0.001
Identities = 20/54 (37%), Positives = 33/54 (61%)
Frame = +3
Query: 390 QVQQWFRAVDKDQSGFITSTELRSALVNAQGQTFSETACNLMIGMFDKDRNGQI 551
++++ FR DKD +GFI++ ELR + N G+ ++ + MI D D +GQI
Sbjct: 34 EIREAFRVFDKDGNGFISAAELRHVMTNL-GEKLTDEEVDEMIREADIDGDGQI 86
>Z73906-16|CAA98123.1| 722|Caenorhabditis elegans Hypothetical
protein T25G3.4 protein.
Length = 722
Score = 39.1 bits (87), Expect = 0.002
Identities = 19/64 (29%), Positives = 35/64 (54%)
Frame = +3
Query: 390 QVQQWFRAVDKDQSGFITSTELRSALVNAQGQTFSETACNLMIGMFDKDRNGQINLDEFD 569
+ ++ F+ +DKD+ G IT +LR Q E + ++ D ++NG+I + EF
Sbjct: 628 RAKERFQQLDKDRKGHITVNDLRKHF-REHNQKIDERVLHELLNEVDLNKNGEIEIAEFF 686
Query: 570 KLYT 581
+LY+
Sbjct: 687 QLYS 690
>Z72516-4|CAA96690.1| 722|Caenorhabditis elegans Hypothetical
protein T25G3.4 protein.
Length = 722
Score = 39.1 bits (87), Expect = 0.002
Identities = 19/64 (29%), Positives = 35/64 (54%)
Frame = +3
Query: 390 QVQQWFRAVDKDQSGFITSTELRSALVNAQGQTFSETACNLMIGMFDKDRNGQINLDEFD 569
+ ++ F+ +DKD+ G IT +LR Q E + ++ D ++NG+I + EF
Sbjct: 628 RAKERFQQLDKDRKGHITVNDLRKHF-REHNQKIDERVLHELLNEVDLNKNGEIEIAEFF 686
Query: 570 KLYT 581
+LY+
Sbjct: 687 QLYS 690
>U40423-5|AAA81454.2| 156|Caenorhabditis elegans Unidentified
vitellogenin-linkedtranscript protein 2 protein.
Length = 156
Score = 37.5 bits (83), Expect = 0.007
Identities = 19/59 (32%), Positives = 32/59 (54%)
Frame = +3
Query: 405 FRAVDKDQSGFITSTELRSALVNAQGQTFSETACNLMIGMFDKDRNGQINLDEFDKLYT 581
F +D D G+IT +ELR+A G + S+ + D++ +G+IN EF ++ T
Sbjct: 96 FEELDVDGDGYITRSELRTAF-QRMGHSLSDQDIKAIYRHVDQNNDGKINFQEFCEMMT 153
Score = 35.5 bits (78), Expect = 0.030
Identities = 20/54 (37%), Positives = 29/54 (53%)
Frame = +3
Query: 405 FRAVDKDQSGFITSTELRSALVNAQGQTFSETACNLMIGMFDKDRNGQINLDEF 566
FR D + G+I ELR A++ GQ+ +E + M DKD +G I+ EF
Sbjct: 27 FREFDLNGDGYIQREELR-AVMQKMGQSPTEDELDAMFQAADKDCDGNIDFQEF 79
>AC024205-5|ABA00164.1| 97|Caenorhabditis elegans Hypothetical
protein Y73C8B.5 protein.
Length = 97
Score = 37.1 bits (82), Expect = 0.010
Identities = 22/62 (35%), Positives = 31/62 (50%)
Frame = +3
Query: 405 FRAVDKDQSGFITSTELRSALVNAQGQTFSETACNLMIGMFDKDRNGQINLDEFDKLYTY 584
F+ D+D +GFI+ EL N Q + +E D DRNGQ++LDE +
Sbjct: 34 FQEFDEDGNGFISVAELEPLFSNFQARLSAE-GIRKTFRYTDIDRNGQVDLDELIDVTRA 92
Query: 585 VN 590
VN
Sbjct: 93 VN 94
>AF098504-1|AAC67412.1| 364|Caenorhabditis elegans Btb and math
domain containingprotein 25 protein.
Length = 364
Score = 33.9 bits (74), Expect = 0.091
Identities = 19/69 (27%), Positives = 38/69 (55%)
Frame = +3
Query: 390 QVQQWFRAVDKDQSGFITSTELRSALVNAQGQTFSETACNLMIGMFDKDRNGQINLDEFD 569
++++ F+ +DKD GFI+ EL++ + N Q +E + I D +G ++L+EF
Sbjct: 280 EIRKVFQDLDKDGDGFISVAELQAVMTNLQA-WLTEEEIDDGIRSADISGDGLVDLEEFI 338
Query: 570 KLYTYVNQW 596
+ + Q+
Sbjct: 339 DVTMHSQQY 347
>Z70267-5|CAA94209.2| 143|Caenorhabditis elegans Hypothetical
protein K04C1.4 protein.
Length = 143
Score = 33.5 bits (73), Expect = 0.12
Identities = 20/52 (38%), Positives = 26/52 (50%)
Frame = +3
Query: 417 DKDQSGFITSTELRSALVNAQGQTFSETACNLMIGMFDKDRNGQINLDEFDK 572
DK+ GFITS ELR L + E L+ G D NG+I ++ F K
Sbjct: 91 DKEGEGFITSAELRQVLTTMGDKLSDEEFDKLVAGQED---NGKIKIETFVK 139
>U88165-10|AAK21395.1| 161|Caenorhabditis elegans Paralysed arrest
at two-fold protein10 protein.
Length = 161
Score = 33.1 bits (72), Expect = 0.16
Identities = 17/66 (25%), Positives = 36/66 (54%)
Frame = +3
Query: 378 TITPQVQQWFRAVDKDQSGFITSTELRSALVNAQGQTFSETACNLMIGMFDKDRNGQINL 557
T+ ++++ FR DK+ +G+I+ L+ AL+ ++ + D+D +G+I
Sbjct: 91 TLEKELREAFRLFDKEGNGYISRPTLK-ALLKEIADDLTDQQLEEAVDEIDEDGSGKIEF 149
Query: 558 DEFDKL 575
+EF +L
Sbjct: 150 EEFWEL 155
>D45896-1|BAA82524.1| 161|Caenorhabditis elegans troponin C
protein.
Length = 161
Score = 33.1 bits (72), Expect = 0.16
Identities = 17/66 (25%), Positives = 36/66 (54%)
Frame = +3
Query: 378 TITPQVQQWFRAVDKDQSGFITSTELRSALVNAQGQTFSETACNLMIGMFDKDRNGQINL 557
T+ ++++ FR DK+ +G+I+ L+ AL+ ++ + D+D +G+I
Sbjct: 91 TLEKELREAFRLFDKEGNGYISRPTLK-ALLKEIADDLTDQQLEEAVDEIDEDGSGKIEF 149
Query: 558 DEFDKL 575
+EF +L
Sbjct: 150 EEFWEL 155
>D45895-1|BAA82523.1| 161|Caenorhabditis elegans troponin C
protein.
Length = 161
Score = 33.1 bits (72), Expect = 0.16
Identities = 17/66 (25%), Positives = 36/66 (54%)
Frame = +3
Query: 378 TITPQVQQWFRAVDKDQSGFITSTELRSALVNAQGQTFSETACNLMIGMFDKDRNGQINL 557
T+ ++++ FR DK+ +G+I+ L+ AL+ ++ + D+D +G+I
Sbjct: 91 TLEKELREAFRLFDKEGNGYISRPTLK-ALLKEIADDLTDQQLEEAVDEIDEDGSGKIEF 149
Query: 558 DEFDKL 575
+EF +L
Sbjct: 150 EEFWEL 155
>Z77655-5|CAB01132.2| 458|Caenorhabditis elegans Hypothetical
protein C56A3.6 protein.
Length = 458
Score = 31.9 bits (69), Expect = 0.37
Identities = 22/57 (38%), Positives = 31/57 (54%)
Frame = +3
Query: 396 QQWFRAVDKDQSGFITSTELRSALVNAQGQTFSETACNLMIGMFDKDRNGQINLDEF 566
+ +FR +D QSG I+ +E L T S+ A + MFD+D NG I+ DEF
Sbjct: 140 KHFFRTMD--QSGIISYSEYIFLLTLL---TKSKAAFRIAFLMFDEDDNGNIDRDEF 191
>AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily
assigned gene nameprotein 192 protein.
Length = 2957
Score = 31.9 bits (69), Expect = 0.37
Identities = 23/69 (33%), Positives = 26/69 (37%)
Frame = +3
Query: 279 YNSGYPGQAAYGGMPPGQLEIGHGPYPSIGVGGTITPQVQQWFRAVDKDQSGFITSTELR 458
Y GY G YGG PP Q + G P Q +QW R D I E
Sbjct: 246 YWDGYQG---YGGPPPSQQQQQQGGGPVTAPQSMQMAQQEQWGRVGTNDLMNVIAQVEKS 302
Query: 459 SALVNAQGQ 485
SA A+ Q
Sbjct: 303 SAECKARIQ 311
Score = 28.7 bits (61), Expect = 3.4
Identities = 13/28 (46%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
Frame = +3
Query: 273 MAYNSGYPGQAA-YGGMPPGQLEIGHGP 353
M GYP Q A YGG+PP +GP
Sbjct: 115 MMRQGGYPNQMAMYGGVPPPHYPSSNGP 142
>U41625-3|AAA83326.1| 264|Caenorhabditis elegans Hypothetical
protein K03A1.4a protein.
Length = 264
Score = 31.5 bits (68), Expect = 0.48
Identities = 20/57 (35%), Positives = 27/57 (47%)
Frame = +3
Query: 405 FRAVDKDQSGFITSTELRSALVNAQGQTFSETACNLMIGMFDKDRNGQINLDEFDKL 575
F D + G IT EL A+ GQ ++ L++ D D+NG I DEF L
Sbjct: 134 FNFFDANNDGRITIDELEKAMQKC-GQKPTKLELRLIMYHGDNDQNGVITFDEFAHL 189
Score = 27.5 bits (58), Expect = 7.9
Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = +3
Query: 390 QVQQWFRAVDKDQSGFITSTELRSALVNAQGQ-TFSETACNLMIGMFDKDRNGQINLD 560
Q+++ F DKD+ GFI E+ S + Q +F + D D +G+I+ +
Sbjct: 203 QLREQFDMFDKDKDGFIEKMEMLSIVRELSLQASFPRQVVEQLFNEADIDGDGKISFE 260
>U97194-8|AAB52447.3| 1254|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 20
protein.
Length = 1254
Score = 31.1 bits (67), Expect = 0.64
Identities = 20/45 (44%), Positives = 20/45 (44%)
Frame = +3
Query: 270 QMAYNSGYPGQAAYGGMPPGQLEIGHGPYPSIGVGGTITPQVQQW 404
QM GYPGQ Y GMPP Q G P GG Q Q W
Sbjct: 711 QMVQQPGYPGQ-GYPGMPPPQGAFPPGYLP----GGAQPTQQQIW 750
>U88169-4|AAB42239.2| 81|Caenorhabditis elegans Hypothetical
protein T03F1.11 protein.
Length = 81
Score = 29.5 bits (63), Expect = 1.9
Identities = 22/75 (29%), Positives = 38/75 (50%), Gaps = 7/75 (9%)
Frame = +3
Query: 390 QVQQWFRAVDKDQSGFITSTELRSALVNAQGQTFSETA--CNL-----MIGMFDKDRNGQ 548
++++ F DKD SGFI+ ++ L+ A+ + NL +I DKD + +
Sbjct: 7 ELREMFSLHDKDMSGFISKDDVICMLLGAEKDDKKDPVFKTNLKFLIQVIKEADKDGDSK 66
Query: 549 INLDEFDKLYTYVNQ 593
I DEF + Y+N+
Sbjct: 67 ITFDEFKE---YINK 78
>Z78415-7|CAH60759.1| 844|Caenorhabditis elegans Hypothetical
protein C17G1.4b protein.
Length = 844
Score = 29.1 bits (62), Expect = 2.6
Identities = 18/38 (47%), Positives = 19/38 (50%)
Frame = +3
Query: 294 PGQAAYGGMPPGQLEIGHGPYPSIGVGGTITPQVQQWF 407
P YGGMPPG IG GP P GG+ QQ F
Sbjct: 45 PPANGYGGMPPGPPNIG-GPQPP---GGSQQKGQQQQF 78
>Z78415-5|CAB01670.1| 925|Caenorhabditis elegans Hypothetical
protein C17G1.4a protein.
Length = 925
Score = 29.1 bits (62), Expect = 2.6
Identities = 18/38 (47%), Positives = 19/38 (50%)
Frame = +3
Query: 294 PGQAAYGGMPPGQLEIGHGPYPSIGVGGTITPQVQQWF 407
P YGGMPPG IG GP P GG+ QQ F
Sbjct: 45 PPANGYGGMPPGPPNIG-GPQPP---GGSQQKGQQQQF 78
>U41030-2|AAA82363.2| 191|Caenorhabditis elegans Neuronal calcium
sensor familyprotein 1 protein.
Length = 191
Score = 29.1 bits (62), Expect = 2.6
Identities = 21/80 (26%), Positives = 36/80 (45%), Gaps = 11/80 (13%)
Frame = +3
Query: 360 SIGVGGTITPQVQQWFRAVDKDQSGFITSTELRSALVNA-----------QGQTFSETAC 506
SI G + ++ F+ D DQ GFIT E+ S + + + + E
Sbjct: 90 SITSRGNLDEKLHWAFKLYDLDQDGFITRNEMLSIVDSIYKMVGSSVQLPEEENTPEKRV 149
Query: 507 NLMIGMFDKDRNGQINLDEF 566
+ + M DK+ + Q+ L+EF
Sbjct: 150 DRIFRMMDKNNDAQLTLEEF 169
>L33680-1|AAA85631.1| 191|Caenorhabditis elegans neuronal calcium
binding protein protein.
Length = 191
Score = 29.1 bits (62), Expect = 2.6
Identities = 21/80 (26%), Positives = 36/80 (45%), Gaps = 11/80 (13%)
Frame = +3
Query: 360 SIGVGGTITPQVQQWFRAVDKDQSGFITSTELRSALVNA-----------QGQTFSETAC 506
SI G + ++ F+ D DQ GFIT E+ S + + + + E
Sbjct: 90 SITSRGNLDEKLHWAFKLYDLDQDGFITRNEMLSIVDSIYKMVGSSVQLPEEENTPEKRV 149
Query: 507 NLMIGMFDKDRNGQINLDEF 566
+ + M DK+ + Q+ L+EF
Sbjct: 150 DRIFRMMDKNNDAQLTLEEF 169
>U28740-5|AAA68320.1| 229|Caenorhabditis elegans Hypothetical
protein B0563.7 protein.
Length = 229
Score = 28.3 bits (60), Expect = 4.5
Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = +3
Query: 390 QVQQWFRAVDKDQSGFITSTELRSALVNAQG--QTFSETACNLMIGMFDKDRNGQINLDE 563
++ + VD D +G I E + + +Q ++ +E +FD+DRNG I +E
Sbjct: 88 EIDNVIKEVDADGNGEIDFEEFCACMKKSQNIVKSTNEELIRECFEIFDQDRNGIITENE 147
Query: 564 F 566
F
Sbjct: 148 F 148
>U58764-3|AAB00725.1| 122|Caenorhabditis elegans Hypothetical
protein M03E7.2 protein.
Length = 122
Score = 27.9 bits (59), Expect = 5.9
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +3
Query: 309 YGGMPPGQLEIGHGPYPSIGVGG 377
YGGMPP G PY G+GG
Sbjct: 53 YGGMPPPMPPPGMSPYGMGGMGG 75
>AF099917-5|AAC68783.2| 219|Caenorhabditis elegans F-box a protein
protein 24 protein.
Length = 219
Score = 27.5 bits (58), Expect = 7.9
Identities = 9/32 (28%), Positives = 21/32 (65%)
Frame = +1
Query: 343 DMDRTLPLELGVLLRPKYSSGSEL*IKINLDS 438
D ++ P+E+ + +P Y+ G+E I+ ++D+
Sbjct: 166 DKSKSNPIEIAKVFKPDYAGGNEFLIEYSIDN 197
>AF078783-5|AAC26922.1| 236|Caenorhabditis elegans Hypothetical
protein H10E21.4 protein.
Length = 236
Score = 27.5 bits (58), Expect = 7.9
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +3
Query: 393 VQQWFRAVDKDQSGFITSTEL 455
VQQ F +DK+Q G++T EL
Sbjct: 196 VQQIFAMLDKNQDGYLTENEL 216
>AC006670-5|AAF39912.2| 356|Caenorhabditis elegans Hypothetical
protein K07A3.3a protein.
Length = 356
Score = 27.5 bits (58), Expect = 7.9
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +3
Query: 516 IGMFDKDRNGQINLDEFDKLYT 581
+G +K + G + LDEFDK+YT
Sbjct: 252 MGDIEKCQRGIVFLDEFDKIYT 273
>AC006670-4|AAU20843.1| 518|Caenorhabditis elegans Hypothetical
protein K07A3.3b protein.
Length = 518
Score = 27.5 bits (58), Expect = 7.9
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +3
Query: 516 IGMFDKDRNGQINLDEFDKLYT 581
+G +K + G + LDEFDK+YT
Sbjct: 252 MGDIEKCQRGIVFLDEFDKIYT 273
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,526,866
Number of Sequences: 27780
Number of extensions: 283937
Number of successful extensions: 805
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 725
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 794
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1300523034
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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