Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11e19
         (545 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like pr...    24   1.00 
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    23   1.3  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    23   1.3  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    23   2.3  
EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic acetyl...    22   4.0  
EF127809-1|ABL67946.1|  311|Tribolium castaneum nicotinic acetyl...    22   4.0  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    22   4.0  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    22   4.0  
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    21   7.0  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    21   7.0  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   7.0  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    21   7.0  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   9.3  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    21   9.3  

>AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like
           protein protein.
          Length = 242

 Score = 23.8 bits (49), Expect = 1.00
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = +3

Query: 135 NSSQQSIQTLSLWLIHHRKH 194
           N++++S  TL  WL  H+K+
Sbjct: 90  NATRESTATLKAWLNEHKKN 109


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 23.4 bits (48), Expect = 1.3
 Identities = 12/37 (32%), Positives = 20/37 (54%)
 Frame = -2

Query: 544 LSSVSVDLRLLTLLGVTGASMPAIASLKSLIFSASYT 434
           L+S+    ++LT+LG+   S P    +  +IF A  T
Sbjct: 12  LNSLKCITKVLTILGLLSCSFPKKKLVYCIIFGAIAT 48


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 23.4 bits (48), Expect = 1.3
 Identities = 12/37 (32%), Positives = 20/37 (54%)
 Frame = -2

Query: 544 LSSVSVDLRLLTLLGVTGASMPAIASLKSLIFSASYT 434
           L+S+    ++LT+LG+   S P    +  +IF A  T
Sbjct: 8   LNSLKCITKVLTILGLLSCSFPKKKLVYCIIFGAIAT 44


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 10/33 (30%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
 Frame = -1

Query: 344 YKNFPKLLSIFRSLFLTVLYYIISKIHE--CEL 252
           Y+   +LL+ ++ +     +Y++SKI    CEL
Sbjct: 157 YRQMHRLLANYKVITSDEFFYLVSKIESLACEL 189


>EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           5 protein.
          Length = 311

 Score = 21.8 bits (44), Expect = 4.0
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = +1

Query: 355 NIWPKLEWN 381
           NIW  LEWN
Sbjct: 53  NIWLSLEWN 61


>EF127809-1|ABL67946.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           4 protein.
          Length = 311

 Score = 21.8 bits (44), Expect = 4.0
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = +1

Query: 355 NIWPKLEWN 381
           NIW  LEWN
Sbjct: 53  NIWLSLEWN 61


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 21.8 bits (44), Expect = 4.0
 Identities = 6/19 (31%), Positives = 12/19 (63%)
 Frame = -1

Query: 458 LNFFCIIYTSFFPYLQYSM 402
           L+ FC++Y     +L Y++
Sbjct: 171 LHLFCVLYVVLLHFLTYNL 189


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 21.8 bits (44), Expect = 4.0
 Identities = 6/19 (31%), Positives = 12/19 (63%)
 Frame = -1

Query: 458 LNFFCIIYTSFFPYLQYSM 402
           L+ FC++Y     +L Y++
Sbjct: 171 LHLFCVLYVVLLHFLTYNL 189


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 21.0 bits (42), Expect = 7.0
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = -2

Query: 487 SMPAIASLKSLIFSASY 437
           SMPA    ++L+FSA++
Sbjct: 338 SMPATGERQTLMFSATF 354


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.0 bits (42), Expect = 7.0
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -1

Query: 452 FFCIIYTSFFPYLQY 408
           F C+ + S+F YL Y
Sbjct: 79  FLCLPFYSYFFYLSY 93


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.0 bits (42), Expect = 7.0
 Identities = 9/32 (28%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
 Frame = -1

Query: 344 YKNFPKLLSIF-RSLFLTVLYYIISKIHECEL 252
           Y +  +L+ +F   ++L  +YYI   +HE  +
Sbjct: 137 YVSLLQLVFVFCYFIYLFTVYYIYYSVHEASI 168


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 21.0 bits (42), Expect = 7.0
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -1

Query: 452 FFCIIYTSFFPYLQY 408
           F C+ + S+F YL Y
Sbjct: 35  FLCLPFYSYFFYLSY 49


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 20.6 bits (41), Expect = 9.3
 Identities = 12/47 (25%), Positives = 21/47 (44%)
 Frame = -2

Query: 523 LRLLTLLGVTGASMPAIASLKSLIFSASYTPLSSHIFNILCKECFVL 383
           + LL LL +       I     L+F  ++   + H+  +LC + F L
Sbjct: 158 VHLLFLLCIYHFFCAFIIFTMHLLFCCAFIFFNMHLLFLLCLDYFTL 204


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 20.6 bits (41), Expect = 9.3
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -2

Query: 415 FNILCKECFVLD 380
           +N LC  CF+LD
Sbjct: 271 YNRLCHLCFLLD 282


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,968
Number of Sequences: 336
Number of extensions: 2611
Number of successful extensions: 14
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13411456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)