Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11e19
         (545 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT012300-1|AAS77425.1|  341|Drosophila melanogaster SD19704p pro...   173   1e-43
AY094845-1|AAM11198.1|  341|Drosophila melanogaster RE04530p pro...   173   1e-43
AE014296-422|AAN12216.1|  341|Drosophila melanogaster CG9018-PB,...   173   1e-43
AE014296-421|AAF47620.1|  375|Drosophila melanogaster CG9018-PA,...   173   1e-43
AE014134-2943|AAF53677.2|  822|Drosophila melanogaster CG15160-P...    84   1e-16
BT030168-1|ABN49307.1|  412|Drosophila melanogaster IP17766p pro...    38   0.012
AE013599-3146|AAF46686.2| 1215|Drosophila melanogaster CG4266-PA...    38   0.012
AY069521-1|AAL39666.2|  958|Drosophila melanogaster LD23810p pro...    29   4.1  
AE013599-3105|AAF46654.1|  957|Drosophila melanogaster CG9346-PA...    29   4.1  

>BT012300-1|AAS77425.1|  341|Drosophila melanogaster SD19704p
           protein.
          Length = 341

 Score =  173 bits (422), Expect = 1e-43
 Identities = 86/151 (56%), Positives = 110/151 (72%)
 Frame = +3

Query: 87  MAGFTENALVRKLQDLNSSQQSIQTLSLWLIHHRKHHAAVVKTWLKELLKAKDSKQLTFM 266
           M+ FT++AL++KL +LNSSQQSIQTLSLWLIHHRKH AA+V+TW +EL    + K+LTFM
Sbjct: 1   MSAFTDSALLKKLAELNSSQQSIQTLSLWLIHHRKHSAAIVRTWQRELENVPEPKKLTFM 60

Query: 267 YLANDVIQNSKKKGPEYGKEFGEVLVESFQHMAKTGMESKTKHSLHRILKIWEERGVYDA 446
           YLANDVIQNSKKKGPEYGKE+  VL + F H+ +     K   SL RIL IW ERGVYD 
Sbjct: 61  YLANDVIQNSKKKGPEYGKEYSLVLGKVFAHIGEKCNSDKLLGSLGRILNIWLERGVYDP 120

Query: 447 EKIKDFKDAIAGIEAPVTPSKVSKRKSTDTE 539
           + I D++  +   EAP + S  + + + D+E
Sbjct: 121 KTIADWRSRLHK-EAPGSSSSSNGKTNGDSE 150


>AY094845-1|AAM11198.1|  341|Drosophila melanogaster RE04530p
           protein.
          Length = 341

 Score =  173 bits (422), Expect = 1e-43
 Identities = 86/151 (56%), Positives = 110/151 (72%)
 Frame = +3

Query: 87  MAGFTENALVRKLQDLNSSQQSIQTLSLWLIHHRKHHAAVVKTWLKELLKAKDSKQLTFM 266
           M+ FT++AL++KL +LNSSQQSIQTLSLWLIHHRKH AA+V+TW +EL    + K+LTFM
Sbjct: 1   MSAFTDSALLKKLAELNSSQQSIQTLSLWLIHHRKHSAAIVRTWQRELENVPEPKKLTFM 60

Query: 267 YLANDVIQNSKKKGPEYGKEFGEVLVESFQHMAKTGMESKTKHSLHRILKIWEERGVYDA 446
           YLANDVIQNSKKKGPEYGKE+  VL + F H+ +     K   SL RIL IW ERGVYD 
Sbjct: 61  YLANDVIQNSKKKGPEYGKEYSLVLGKVFAHIGEKCNSDKLLGSLGRILNIWLERGVYDP 120

Query: 447 EKIKDFKDAIAGIEAPVTPSKVSKRKSTDTE 539
           + I D++  +   EAP + S  + + + D+E
Sbjct: 121 KTIADWRSRLHK-EAPGSSSSSNGKTNGDSE 150


>AE014296-422|AAN12216.1|  341|Drosophila melanogaster CG9018-PB,
           isoform B protein.
          Length = 341

 Score =  173 bits (422), Expect = 1e-43
 Identities = 86/151 (56%), Positives = 110/151 (72%)
 Frame = +3

Query: 87  MAGFTENALVRKLQDLNSSQQSIQTLSLWLIHHRKHHAAVVKTWLKELLKAKDSKQLTFM 266
           M+ FT++AL++KL +LNSSQQSIQTLSLWLIHHRKH AA+V+TW +EL    + K+LTFM
Sbjct: 1   MSAFTDSALLKKLAELNSSQQSIQTLSLWLIHHRKHSAAIVRTWQRELENVPEPKKLTFM 60

Query: 267 YLANDVIQNSKKKGPEYGKEFGEVLVESFQHMAKTGMESKTKHSLHRILKIWEERGVYDA 446
           YLANDVIQNSKKKGPEYGKE+  VL + F H+ +     K   SL RIL IW ERGVYD 
Sbjct: 61  YLANDVIQNSKKKGPEYGKEYSLVLGKVFAHIGEKCNSDKLLGSLGRILNIWLERGVYDP 120

Query: 447 EKIKDFKDAIAGIEAPVTPSKVSKRKSTDTE 539
           + I D++  +   EAP + S  + + + D+E
Sbjct: 121 KTIADWRSRLHK-EAPGSSSSSNGKTNGDSE 150


>AE014296-421|AAF47620.1|  375|Drosophila melanogaster CG9018-PA,
           isoform A protein.
          Length = 375

 Score =  173 bits (422), Expect = 1e-43
 Identities = 86/151 (56%), Positives = 110/151 (72%)
 Frame = +3

Query: 87  MAGFTENALVRKLQDLNSSQQSIQTLSLWLIHHRKHHAAVVKTWLKELLKAKDSKQLTFM 266
           M+ FT++AL++KL +LNSSQQSIQTLSLWLIHHRKH AA+V+TW +EL    + K+LTFM
Sbjct: 1   MSAFTDSALLKKLAELNSSQQSIQTLSLWLIHHRKHSAAIVRTWQRELENVPEPKKLTFM 60

Query: 267 YLANDVIQNSKKKGPEYGKEFGEVLVESFQHMAKTGMESKTKHSLHRILKIWEERGVYDA 446
           YLANDVIQNSKKKGPEYGKE+  VL + F H+ +     K   SL RIL IW ERGVYD 
Sbjct: 61  YLANDVIQNSKKKGPEYGKEYSLVLGKVFAHIGEKCNSDKLLGSLGRILNIWLERGVYDP 120

Query: 447 EKIKDFKDAIAGIEAPVTPSKVSKRKSTDTE 539
           + I D++  +   EAP + S  + + + D+E
Sbjct: 121 KTIADWRSRLHK-EAPGSSSSSNGKTNGDSE 150


>AE014134-2943|AAF53677.2|  822|Drosophila melanogaster CG15160-PA
           protein.
          Length = 822

 Score = 84.2 bits (199), Expect = 1e-16
 Identities = 42/122 (34%), Positives = 64/122 (52%)
 Frame = +3

Query: 96  FTENALVRKLQDLNSSQQSIQTLSLWLIHHRKHHAAVVKTWLKELLKAKDSKQLTFMYLA 275
           F E     +L+ L  +Q+ IQ +S W + HR +H  +++ WL    + +   +L   YLA
Sbjct: 5   FDEELFETRLEALKDTQEGIQQMSNWCLQHRSNHKKIIQCWLNVFKRVRVDHRLVLFYLA 64

Query: 276 NDVIQNSKKKGPEYGKEFGEVLVESFQHMAKTGMESKTKHSLHRILKIWEERGVYDAEKI 455
           NDVIQ SK+K   Y  EF E    + Q       + + K  + RI KIWE+R +Y+ E +
Sbjct: 65  NDVIQYSKRK--RY--EFVECWATALQRATTMVRDERVKDKILRIFKIWEQREIYNEEYL 120

Query: 456 KD 461
            D
Sbjct: 121 SD 122


>BT030168-1|ABN49307.1|  412|Drosophila melanogaster IP17766p
           protein.
          Length = 412

 Score = 37.5 bits (83), Expect = 0.012
 Identities = 23/98 (23%), Positives = 53/98 (54%), Gaps = 4/98 (4%)
 Frame = +3

Query: 189 KHHAAVVKTWLKELLKAKDSKQLTFMYLANDVIQNSKKK-GPE---YGKEFGEVLVESFQ 356
           K +  VV++  K +LK K   ++  +Y+ + +++ S+ + G +   +   F   L E+F 
Sbjct: 38  KLYKHVVQSVEKFILKCKPEYKVPGLYVIDSIVRQSRHQYGMDKDLFAPRFQRNLTETFA 97

Query: 357 HMAKTGMESKTKHSLHRILKIWEERGVYDAEKIKDFKD 470
           ++ +   E K++  + R+L +W++  V+ +E I+   D
Sbjct: 98  NLFRCAPEDKSR--IIRVLNLWQKNNVFKSEVIQPIFD 133


>AE013599-3146|AAF46686.2| 1215|Drosophila melanogaster CG4266-PA
           protein.
          Length = 1215

 Score = 37.5 bits (83), Expect = 0.012
 Identities = 23/98 (23%), Positives = 53/98 (54%), Gaps = 4/98 (4%)
 Frame = +3

Query: 189 KHHAAVVKTWLKELLKAKDSKQLTFMYLANDVIQNSKKK-GPE---YGKEFGEVLVESFQ 356
           K +  VV++  K +LK K   ++  +Y+ + +++ S+ + G +   +   F   L E+F 
Sbjct: 38  KLYKHVVQSVEKFILKCKPEYKVPGLYVIDSIVRQSRHQYGMDKDLFAPRFQRNLTETFA 97

Query: 357 HMAKTGMESKTKHSLHRILKIWEERGVYDAEKIKDFKD 470
           ++ +   E K++  + R+L +W++  V+ +E I+   D
Sbjct: 98  NLFRCAPEDKSR--IIRVLNLWQKNNVFKSEVIQPIFD 133


>AY069521-1|AAL39666.2|  958|Drosophila melanogaster LD23810p
           protein.
          Length = 958

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 23/83 (27%), Positives = 39/83 (46%), Gaps = 1/83 (1%)
 Frame = +3

Query: 288 QNSKKK-GPEYGKEFGEVLVESFQHMAKTGMESKTKHSLHRILKIWEERGVYDAEKIKDF 464
           Q SKK+   +  KE       +F+   +T  ++ T  S     K+W + G YDA   ++ 
Sbjct: 39  QLSKKELEDQKKKEDAAAAAHAFKEFVETFQDAPTPSS-----KVWVKAGTYDAGSRRED 93

Query: 465 KDAIAGIEAPVTPSKVSKRKSTD 533
           K     +  PV  SK+ ++ S+D
Sbjct: 94  KSEKGKLYKPV--SKLMEKSSSD 114


>AE013599-3105|AAF46654.1|  957|Drosophila melanogaster CG9346-PA
           protein.
          Length = 957

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 23/83 (27%), Positives = 39/83 (46%), Gaps = 1/83 (1%)
 Frame = +3

Query: 288 QNSKKK-GPEYGKEFGEVLVESFQHMAKTGMESKTKHSLHRILKIWEERGVYDAEKIKDF 464
           Q SKK+   +  KE       +F+   +T  ++ T  S     K+W + G YDA   ++ 
Sbjct: 38  QLSKKELEDQKKKEDAAAAAHAFKEFVETFQDAPTPSS-----KVWVKAGTYDAGSRRED 92

Query: 465 KDAIAGIEAPVTPSKVSKRKSTD 533
           K     +  PV  SK+ ++ S+D
Sbjct: 93  KSEKGKLYKPV--SKLMEKSSSD 113


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,531,371
Number of Sequences: 53049
Number of extensions: 415618
Number of successful extensions: 1243
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1211
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1237
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2069139900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)