BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bmov11e18 (523 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 08_01_0202 - 1638978-1639571 73 1e-13 02_01_0158 - 1103461-1104186 73 1e-13 03_06_0157 - 32039020-32039175,32039267-32039338,32039478-320396... 30 1.3 05_02_0119 + 6793292-6793613,6795793-6795952,6796416-6796458,679... 29 2.3 04_04_1582 - 34590698-34591199,34593849-34594690 29 2.3 03_01_0483 + 3689155-3689814 29 3.0 11_06_0416 + 23307984-23308281,23310083-23310900 28 4.0 03_06_0609 - 35042276-35042388,35042476-35042527,35042624-350427... 28 4.0 01_06_0756 - 31731607-31731752,31732368-31732467,31732716-317329... 28 4.0 08_02_0503 - 17848739-17849004,17849109-17849268,17849368-178496... 28 5.2 08_01_0229 + 1834102-1834358,1834442-1834901 28 5.2 01_01_0569 - 4214513-4214669,4215082-4216031,4216488-4216547 28 5.2 11_08_0034 - 27827583-27827998,27828111-27829430,27829568-27831008 27 9.1 09_02_0515 + 10121849-10122149,10132151-10132187,10132314-101327... 27 9.1 08_01_0246 - 2028701-2029060,2029149-2030606,2030729-2031160 27 9.1 07_03_0592 + 19805647-19805817,19805960-19806332,19807347-19807474 27 9.1 02_03_0120 + 15463163-15465250 27 9.1 >08_01_0202 - 1638978-1639571 Length = 197 Score = 73.3 bits (172), Expect = 1e-13 Identities = 40/93 (43%), Positives = 57/93 (61%), Gaps = 2/93 (2%) Frame = +2 Query: 203 AEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVA 382 +E+V GTVKWF+ G+GFI +D ED+FVHQ+++ + RS+ DG+ VEF+V + Sbjct: 3 SERVKGTVKWFDATKGFGFITPDDGGEDLFVHQSSLKSD----GYRSLNDGDVVEFSVGS 58 Query: 383 GEKG-FEAAGVTGPGGEPVK-GSPYAADKRRGY 475 G G +A VT PGG + GS + RGY Sbjct: 59 GNDGRTKAVDVTAPGGGALTGGSRPSGGGDRGY 91 >02_01_0158 - 1103461-1104186 Length = 241 Score = 72.9 bits (171), Expect = 1e-13 Identities = 39/81 (48%), Positives = 51/81 (62%), Gaps = 1/81 (1%) Frame = +2 Query: 203 AEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVA 382 A + GTVKWFN G+GFI+ +D ED+FVHQ++I + RS+ +GE VEFA+ Sbjct: 4 AARHRGTVKWFNDTKGFGFISPDDGSEDLFVHQSSIKAD----GFRSLAEGEQVEFAISE 59 Query: 383 GEKG-FEAAGVTGPGGEPVKG 442 E G +A VTGP G VKG Sbjct: 60 SEDGRTKAVDVTGPDGSFVKG 80 >03_06_0157 - 32039020-32039175,32039267-32039338,32039478-32039602, 32039678-32040559,32040623-32040692,32041248-32041739, 32041985-32042044,32042541-32042618,32043322-32044344 Length = 985 Score = 29.9 bits (64), Expect = 1.3 Identities = 14/30 (46%), Positives = 17/30 (56%) Frame = +2 Query: 353 GEAVEFAVVAGEKGFEAAGVTGPGGEPVKG 442 GE+ E ++ GE E V GPGGEP G Sbjct: 388 GESKEDEIIEGEPDPEMEVVAGPGGEPKVG 417 >05_02_0119 + 6793292-6793613,6795793-6795952,6796416-6796458, 6797015-6797335 Length = 281 Score = 29.1 bits (62), Expect = 2.3 Identities = 29/94 (30%), Positives = 35/94 (37%), Gaps = 13/94 (13%) Frame = +2 Query: 230 WFNVKSGYGF-INRNDTKEDVFVHQTAIARNNPRKAVRSVGDGE--------AVEFAVVA 382 W NV SG R +E V R +P +A + G E VA Sbjct: 8 WINVSSGLDSGRQRGRRREGALVAWGGAQRTSPVEAAARMESGGWHRRTSMIVREELEVA 67 Query: 383 GE----KGFEAAGVTGPGGEPVKGSPYAADKRRG 472 G+ G EA G +GPGGE D RRG Sbjct: 68 GDGRRASGVEAPGGSGPGGERTMAPANIDDSRRG 101 >04_04_1582 - 34590698-34591199,34593849-34594690 Length = 447 Score = 29.1 bits (62), Expect = 2.3 Identities = 15/41 (36%), Positives = 21/41 (51%) Frame = +2 Query: 347 GDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKRR 469 GDG E + G+KG G G GG KGS ++++ R Sbjct: 229 GDGGVEEGSAGGGKKGGGGGGGGGGGGHGEKGSAKSSEQER 269 >03_01_0483 + 3689155-3689814 Length = 219 Score = 28.7 bits (61), Expect = 3.0 Identities = 18/42 (42%), Positives = 22/42 (52%) Frame = +2 Query: 347 GDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKRRG 472 GDG A AG G +AA G G +PV+GS +D RG Sbjct: 62 GDGGADPVRGSAG--GSDAARGDGGGADPVRGSAGGSDAARG 101 Score = 27.9 bits (59), Expect = 5.2 Identities = 16/42 (38%), Positives = 21/42 (50%) Frame = +2 Query: 347 GDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKRRG 472 GDG + V G +AA G G +PV+GS +D RG Sbjct: 81 GDGGGAD-PVRGSAGGSDAARGDGGGADPVRGSAGGSDAARG 121 >11_06_0416 + 23307984-23308281,23310083-23310900 Length = 371 Score = 28.3 bits (60), Expect = 4.0 Identities = 12/27 (44%), Positives = 17/27 (62%) Frame = -3 Query: 503 HLDEGNIGGGSHGACLQHKVSLLLAHH 423 HLD+ N+ G +G + K+SLL A H Sbjct: 89 HLDDPNVDGVRNGVRARFKISLLAAAH 115 >03_06_0609 - 35042276-35042388,35042476-35042527,35042624-35042725, 35043546-35043745,35045258-35045336,35045541-35045595, 35045947-35046122,35046386-35046988,35047077-35047265, 35048150-35048201,35048289-35048356,35048873-35048911, 35048912-35048970,35049639-35049782,35050136-35050238, 35050368-35050467,35050596-35050612 Length = 716 Score = 28.3 bits (60), Expect = 4.0 Identities = 13/43 (30%), Positives = 22/43 (51%) Frame = -1 Query: 418 TSNTSCFKAFLPGNHGKLHRLSVADRAHSLTWVVTGDGSLMHK 290 T N ++ FLP G + L + D ++ W ++ + SL HK Sbjct: 293 TENDCAWQRFLPS--GPIALLPIGDNYSNIVWTMSPEESLRHK 333 >01_06_0756 - 31731607-31731752,31732368-31732467,31732716-31732943, 31733390-31733474,31733583-31733662,31733755-31733826, 31733964-31734058,31735442-31735523,31735646-31735927 Length = 389 Score = 28.3 bits (60), Expect = 4.0 Identities = 24/95 (25%), Positives = 42/95 (44%), Gaps = 2/95 (2%) Frame = +2 Query: 197 VIAEKVSGTVKWFNVKSGYGF--INRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEF 370 +++EK GT +V+S + +N N + ED+ HQ A+ + +S G G+ + Sbjct: 281 MVSEKNGGTD---SVESAFDNENVNSNISHEDMHQHQKVNAKGGRKGRYKSQGRGQIQQN 337 Query: 371 AVVAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGY 475 G A + +P+ G P D RG+ Sbjct: 338 TSGQGHVSSPATSGSDHVNKPIPG-PRMPDGTRGF 371 >08_02_0503 - 17848739-17849004,17849109-17849268,17849368-17849691, 17849787-17850209 Length = 390 Score = 27.9 bits (59), Expect = 5.2 Identities = 18/57 (31%), Positives = 27/57 (47%) Frame = +2 Query: 272 DTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKG 442 D +D + + A A NP A R G +A + + + G++ AGV G VKG Sbjct: 106 DIADDQVLVRVAAAALNPVDAKRRAGKFKATD-SPLPTVPGYDVAGVVVKAGRKVKG 161 >08_01_0229 + 1834102-1834358,1834442-1834901 Length = 238 Score = 27.9 bits (59), Expect = 5.2 Identities = 9/12 (75%), Positives = 11/12 (91%) Frame = -1 Query: 100 GVIGERRWWQRW 65 GV+GERR W+RW Sbjct: 134 GVVGERRRWRRW 145 >01_01_0569 - 4214513-4214669,4215082-4216031,4216488-4216547 Length = 388 Score = 27.9 bits (59), Expect = 5.2 Identities = 17/38 (44%), Positives = 17/38 (44%) Frame = +2 Query: 335 VRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSP 448 VR G G A FAV G A G GGEP SP Sbjct: 53 VRGGGGGGAALFAVPRLFVGLAAKRGAGDGGEPASRSP 90 >11_08_0034 - 27827583-27827998,27828111-27829430,27829568-27831008 Length = 1058 Score = 27.1 bits (57), Expect = 9.1 Identities = 13/35 (37%), Positives = 20/35 (57%) Frame = -1 Query: 436 YWLTTGTSNTSCFKAFLPGNHGKLHRLSVADRAHS 332 + + +NTS LPG+ GKLHRL + D ++ Sbjct: 102 FLIVLNLANTS-LTGTLPGDIGKLHRLELLDLGYN 135 >09_02_0515 + 10121849-10122149,10132151-10132187,10132314-10132790, 10133184-10133733 Length = 454 Score = 27.1 bits (57), Expect = 9.1 Identities = 11/24 (45%), Positives = 13/24 (54%) Frame = +2 Query: 212 VSGTVKWFNVKSGYGFINRNDTKE 283 V+ VKW +KSG F N KE Sbjct: 195 VAAAVKWLKIKSGQAFAVENYVKE 218 >08_01_0246 - 2028701-2029060,2029149-2030606,2030729-2031160 Length = 749 Score = 27.1 bits (57), Expect = 9.1 Identities = 18/66 (27%), Positives = 26/66 (39%), Gaps = 4/66 (6%) Frame = +2 Query: 296 HQTAIARNNPRKAVRSVGDGEA----VEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADK 463 HQ + P+ S DG A +E + G E+ G G GG P + Sbjct: 29 HQQHQHQLPPQATTTSESDGRAPRDELEMSKSGGSDNLESGGGGGGGGSGGDQDPNQRPR 88 Query: 464 RRGYHR 481 ++ YHR Sbjct: 89 KKRYHR 94 >07_03_0592 + 19805647-19805817,19805960-19806332,19807347-19807474 Length = 223 Score = 27.1 bits (57), Expect = 9.1 Identities = 15/28 (53%), Positives = 16/28 (57%) Frame = +2 Query: 302 TAIARNNPRKAVRSVGDGEAVEFAVVAG 385 TAI N AV +VGD AV F V AG Sbjct: 68 TAILINGETLAVANVGDSRAVAFDVRAG 95 >02_03_0120 + 15463163-15465250 Length = 695 Score = 27.1 bits (57), Expect = 9.1 Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 2/43 (4%) Frame = +2 Query: 305 AIARNNPRKAVRSVGDGEAVEFAVVA--GEKGFEAAGVTGPGG 427 ++ R N AV S GEA VA KGF++ V G GG Sbjct: 357 SVRRKNQEHAVASEDMGEATLSMEVARAATKGFDSGNVIGVGG 399 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 12,997,475 Number of Sequences: 37544 Number of extensions: 225280 Number of successful extensions: 986 Number of sequences better than 10.0: 17 Number of HSP's better than 10.0 without gapping: 951 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 983 length of database: 14,793,348 effective HSP length: 77 effective length of database: 11,902,460 effective search space used: 1142636160 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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