Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11e16
         (663 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    26   0.24 
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    26   0.24 
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    21   6.8  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    21   6.8  

>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 26.2 bits (55), Expect = 0.24
 Identities = 12/37 (32%), Positives = 22/37 (59%)
 Frame = -1

Query: 366 SEKLLLCQTMSPNSFERRTKILILHPEYLFFSPCVMS 256
           S  + +CQT+S   + +R  +L++   YL+F   V+S
Sbjct: 194 SYNIYVCQTVSNFEYFQRKILLMIQLYYLYFDVIVIS 230


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 26.2 bits (55), Expect = 0.24
 Identities = 12/37 (32%), Positives = 22/37 (59%)
 Frame = -1

Query: 366 SEKLLLCQTMSPNSFERRTKILILHPEYLFFSPCVMS 256
           S  + +CQT+S   + +R  +L++   YL+F   V+S
Sbjct: 120 SYNIYVCQTVSNFEYFQRKILLMIQLYYLYFDVIVIS 156


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 10/33 (30%), Positives = 17/33 (51%)
 Frame = +3

Query: 231 PELEDRSVWTLHKGKKRGTQDEVSIFLFDVQKN 329
           PE  +R +        + T+ EV +FL  ++KN
Sbjct: 342 PEFRERLLNVNLSAVDQKTRQEVHMFLMAIEKN 374


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 10/33 (30%), Positives = 17/33 (51%)
 Frame = +3

Query: 231 PELEDRSVWTLHKGKKRGTQDEVSIFLFDVQKN 329
           PE  +R +        + T+ EV +FL  ++KN
Sbjct: 342 PEFRERLLNVNLSAVDQKTRQEVHMFLMAIEKN 374


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,781
Number of Sequences: 336
Number of extensions: 3257
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17177325
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)