Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11e16
         (663 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    26   0.92 
AF063021-1|AAC16246.1|   69|Anopheles gambiae unknown protein.         24   4.9  
AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            23   6.5  

>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
            growth factor receptorprotein.
          Length = 1433

 Score = 26.2 bits (55), Expect = 0.92
 Identities = 21/84 (25%), Positives = 38/84 (45%), Gaps = 2/84 (2%)
 Frame = +3

Query: 372  LKTTRHPSLLHYLDSCETEKFLYIATEYVEPLSTHLECMRLEGQQ--KDLFLAWGVFQIT 545
            + +  HP+LL  L  C T + + I    + PL   L+ +R    +      L W   QI 
Sbjct: 888  MASVEHPNLLKLLAVCMTSQMMLIT--QLMPLGCLLDYVRNNKDKIGSKALLNWST-QIA 944

Query: 546  RALSFLNNDGNMRHNNVCLYSVFV 617
            R +++L  +  + H ++   +V V
Sbjct: 945  RGMAYL-EERRLVHRDLAARNVLV 967


>AF063021-1|AAC16246.1|   69|Anopheles gambiae unknown protein.
          Length = 69

 Score = 23.8 bits (49), Expect = 4.9
 Identities = 11/26 (42%), Positives = 14/26 (53%), Gaps = 3/26 (11%)
 Frame = +1

Query: 163 ALC---GHFSLEILQRIFRTMLVNPY 231
           ALC       +E+  RIFR +L  PY
Sbjct: 26  ALCDCAARVQVEVFSRIFRRLLTKPY 51


>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 23.4 bits (48), Expect = 6.5
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -1

Query: 354 LLCQTMSPNSFERRTKILILHPE 286
           LLC+  + NS    T   +LHPE
Sbjct: 47  LLCRLRTINSELENTNFSVLHPE 69


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 638,329
Number of Sequences: 2352
Number of extensions: 11939
Number of successful extensions: 10
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66068490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)