Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11e16
         (663 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435329-1|ABD92644.1|  150|Apis mellifera OBP12 protein.              23   3.4  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    22   6.0  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    22   6.0  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    22   6.0  

>DQ435329-1|ABD92644.1|  150|Apis mellifera OBP12 protein.
          Length = 150

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 11/39 (28%), Positives = 20/39 (51%)
 Frame = +3

Query: 213 DVGEPVPELEDRSVWTLHKGKKRGTQDEVSIFLFDVQKN 329
           ++ + + +  DRS  T H+ KK     E  I L + ++N
Sbjct: 26  NIFQDIADCVDRSNMTFHELKKLRDSSEARIKLINEEEN 64


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/33 (27%), Positives = 17/33 (51%)
 Frame = +3

Query: 429 KFLYIATEYVEPLSTHLECMRLEGQQKDLFLAW 527
           K +Y     V+P + + E  R++G  K  ++ W
Sbjct: 370 KDMYEKMVQVDPTAPNAEERRVQGVTKPRYMVW 402


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/33 (27%), Positives = 17/33 (51%)
 Frame = +3

Query: 429 KFLYIATEYVEPLSTHLECMRLEGQQKDLFLAW 527
           K +Y     V+P + + E  R++G  K  ++ W
Sbjct: 285 KDMYEKMVQVDPTAPNAEERRVQGVTKPRYMVW 317


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/33 (27%), Positives = 17/33 (51%)
 Frame = +3

Query: 429 KFLYIATEYVEPLSTHLECMRLEGQQKDLFLAW 527
           K +Y     V+P + + E  R++G  K  ++ W
Sbjct: 604 KDMYEKMVQVDPTAPNAEERRVQGVTKPRYMVW 636



 Score = 21.4 bits (43), Expect = 7.9
 Identities = 8/30 (26%), Positives = 15/30 (50%)
 Frame = +2

Query: 197 KGFSVRCW*TRTRTGRQKCLDITQGEKKRY 286
           KG   RCW   +     + + +T  ++KR+
Sbjct: 209 KGSIARCWSLDSTAASDEDISLTTHQQKRH 238


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,385
Number of Sequences: 438
Number of extensions: 3557
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 19977660
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)