Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11e14
         (535 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y17392-1|CAA76759.1|  122|Homo sapiens prefoldin subunit 1 protein.    84   3e-16
AK223394-1|BAD97114.1|  122|Homo sapiens prefoldin 1 variant pro...    84   3e-16
BC011869-1|AAH11869.1|  122|Homo sapiens prefoldin subunit 1 pro...    84   3e-16
BC006202-1|AAH06202.1|  122|Homo sapiens prefoldin subunit 1 pro...    84   3e-16
BC003620-1|AAH03620.1|  122|Homo sapiens prefoldin subunit 1 pro...    84   3e-16
BX571742-1|CAE11868.1|  902|Homo sapiens hypothetical protein pr...    32   1.1  
BC040956-1|AAH40956.1|  699|Homo sapiens zinc finger CCCH-type, ...    32   1.1  
BC033105-1|AAH33105.1|  699|Homo sapiens zinc finger CCCH-type, ...    32   1.1  
BC025308-1|AAH25308.1|  699|Homo sapiens zinc finger CCCH-type, ...    32   1.1  
BC002935-1|AAH02935.1|  447|Homo sapiens ZC3HAV1 protein protein.      32   1.1  

>Y17392-1|CAA76759.1|  122|Homo sapiens prefoldin subunit 1 protein.
          Length = 122

 Score = 84.2 bits (199), Expect = 3e-16
 Identities = 44/116 (37%), Positives = 65/116 (56%)
 Frame = +3

Query: 186 MAKTVDLELKQAFVDLQVLMIETKKTIENIDHQLAVLGRMQMHTNLTQREIDVLPPGTKT 365
           MA  VDLELK+AF +LQ  +I+T++ ++  D Q+  L R + H +LT  EI  L   T  
Sbjct: 1   MAAPVDLELKKAFTELQAKVIDTQQKVKLADIQIEQLNRTKKHAHLTDTEIMTLVDETNM 60

Query: 366 YESMARMFVQSDLEHIKQNLRQKTNTLISRIDDLNNRKVCLNHTLNESESNIRDLI 533
           YE + RMF+    E I   L +K      +I +L  +K  L   L E+E NIR+++
Sbjct: 61  YEGVGRMFILQSKEAIHSQLLEKQKIAEEKIKELEQKKSYLERRLKEAEDNIREML 116


>AK223394-1|BAD97114.1|  122|Homo sapiens prefoldin 1 variant
           protein.
          Length = 122

 Score = 84.2 bits (199), Expect = 3e-16
 Identities = 43/116 (37%), Positives = 66/116 (56%)
 Frame = +3

Query: 186 MAKTVDLELKQAFVDLQVLMIETKKTIENIDHQLAVLGRMQMHTNLTQREIDVLPPGTKT 365
           MA  VDLELK+AF +LQ  +I+T++ ++  D Q+  L R + H +LT  EI  L   T  
Sbjct: 1   MAAPVDLELKKAFTELQAKVIDTQQKVKLADIQIEQLNRTKKHAHLTDTEIMTLVDETNM 60

Query: 366 YESMARMFVQSDLEHIKQNLRQKTNTLISRIDDLNNRKVCLNHTLNESESNIRDLI 533
           YE + RMF+    E I   L +K      +I +L  +K  L  ++ E+E NIR+++
Sbjct: 61  YEGVGRMFILQSKEAIHSQLLEKQKVAEEKIKELEQKKSYLERSVKEAEDNIREML 116


>BC011869-1|AAH11869.1|  122|Homo sapiens prefoldin subunit 1
           protein.
          Length = 122

 Score = 83.8 bits (198), Expect = 3e-16
 Identities = 43/116 (37%), Positives = 66/116 (56%)
 Frame = +3

Query: 186 MAKTVDLELKQAFVDLQVLMIETKKTIENIDHQLAVLGRMQMHTNLTQREIDVLPPGTKT 365
           MA  VDLELK+AF +LQ  +I+T++ ++  D Q+  L R + H +LT  EI  L   T  
Sbjct: 1   MAAPVDLELKKAFTELQAKVIDTQQKVKLADIQIEQLNRTKKHAHLTDTEIMTLVDETNM 60

Query: 366 YESMARMFVQSDLEHIKQNLRQKTNTLISRIDDLNNRKVCLNHTLNESESNIRDLI 533
           YE + RMF+    E I   L +K      +I +L  +K  L  ++ E+E NIR+++
Sbjct: 61  YEGVGRMFILQSKEAIHSQLLEKQKIAEEKIKELEQKKSYLERSVKEAEDNIREML 116


>BC006202-1|AAH06202.1|  122|Homo sapiens prefoldin subunit 1
           protein.
          Length = 122

 Score = 83.8 bits (198), Expect = 3e-16
 Identities = 43/116 (37%), Positives = 66/116 (56%)
 Frame = +3

Query: 186 MAKTVDLELKQAFVDLQVLMIETKKTIENIDHQLAVLGRMQMHTNLTQREIDVLPPGTKT 365
           MA  VDLELK+AF +LQ  +I+T++ ++  D Q+  L R + H +LT  EI  L   T  
Sbjct: 1   MAAPVDLELKKAFTELQAKVIDTQQKVKLADIQIEQLNRTKKHAHLTDTEIMTLVDETNM 60

Query: 366 YESMARMFVQSDLEHIKQNLRQKTNTLISRIDDLNNRKVCLNHTLNESESNIRDLI 533
           YE + RMF+    E I   L +K      +I +L  +K  L  ++ E+E NIR+++
Sbjct: 61  YEGVGRMFILQSKEAIHSQLLEKQKIAEEKIKELEQKKSYLERSVKEAEDNIREML 116


>BC003620-1|AAH03620.1|  122|Homo sapiens prefoldin subunit 1
           protein.
          Length = 122

 Score = 83.8 bits (198), Expect = 3e-16
 Identities = 43/116 (37%), Positives = 66/116 (56%)
 Frame = +3

Query: 186 MAKTVDLELKQAFVDLQVLMIETKKTIENIDHQLAVLGRMQMHTNLTQREIDVLPPGTKT 365
           MA  VDLELK+AF +LQ  +I+T++ ++  D Q+  L R + H +LT  EI  L   T  
Sbjct: 1   MAAPVDLELKKAFTELQAKVIDTQQKVKLADIQIEQLNRTKKHAHLTDTEIMTLVDETNM 60

Query: 366 YESMARMFVQSDLEHIKQNLRQKTNTLISRIDDLNNRKVCLNHTLNESESNIRDLI 533
           YE + RMF+    E I   L +K      +I +L  +K  L  ++ E+E NIR+++
Sbjct: 61  YEGVGRMFILQSKEAIHSQLLEKQKIAEEKIKELEQKKSYLERSVKEAEDNIREML 116


>BX571742-1|CAE11868.1|  902|Homo sapiens hypothetical protein
           protein.
          Length = 902

 Score = 32.3 bits (70), Expect = 1.1
 Identities = 15/63 (23%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
 Frame = +3

Query: 312 HTNLTQREIDVLPPGTKTYESMARMFVQSD--LEHIKQNLRQKTNTLISRIDDLNNRKVC 485
           H  ++   I    P ++  ++  R+   +D  +  +  +L   T+T  SR+DD ++ ++C
Sbjct: 454 HREISSPRIQDAGPASRDVQATGRIADDADPRVALVNDSLSDVTSTTSSRVDDHDSEEIC 513

Query: 486 LNH 494
           L+H
Sbjct: 514 LDH 516


>BC040956-1|AAH40956.1|  699|Homo sapiens zinc finger CCCH-type,
           antiviral 1 protein.
          Length = 699

 Score = 32.3 bits (70), Expect = 1.1
 Identities = 15/63 (23%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
 Frame = +3

Query: 312 HTNLTQREIDVLPPGTKTYESMARMFVQSD--LEHIKQNLRQKTNTLISRIDDLNNRKVC 485
           H  ++   I    P ++  ++  R+   +D  +  +  +L   T+T  SR+DD ++ ++C
Sbjct: 454 HREISSPRIQDAGPASRDVQATGRIADDADPRVALVNDSLSDVTSTTSSRVDDHDSEEIC 513

Query: 486 LNH 494
           L+H
Sbjct: 514 LDH 516


>BC033105-1|AAH33105.1|  699|Homo sapiens zinc finger CCCH-type,
           antiviral 1 protein.
          Length = 699

 Score = 32.3 bits (70), Expect = 1.1
 Identities = 15/63 (23%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
 Frame = +3

Query: 312 HTNLTQREIDVLPPGTKTYESMARMFVQSD--LEHIKQNLRQKTNTLISRIDDLNNRKVC 485
           H  ++   I    P ++  ++  R+   +D  +  +  +L   T+T  SR+DD ++ ++C
Sbjct: 454 HREISSPRIQDAGPASRDVQATGRIADDADPRVALVNDSLSDVTSTTSSRVDDHDSEEIC 513

Query: 486 LNH 494
           L+H
Sbjct: 514 LDH 516


>BC025308-1|AAH25308.1|  699|Homo sapiens zinc finger CCCH-type,
           antiviral 1 protein.
          Length = 699

 Score = 32.3 bits (70), Expect = 1.1
 Identities = 15/63 (23%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
 Frame = +3

Query: 312 HTNLTQREIDVLPPGTKTYESMARMFVQSD--LEHIKQNLRQKTNTLISRIDDLNNRKVC 485
           H  ++   I    P ++  ++  R+   +D  +  +  +L   T+T  SR+DD ++ ++C
Sbjct: 454 HREISSPRIQDAGPASRDVQATGRIADDADPRVALVNDSLSDVTSTTSSRVDDHDSEEIC 513

Query: 486 LNH 494
           L+H
Sbjct: 514 LDH 516


>BC002935-1|AAH02935.1|  447|Homo sapiens ZC3HAV1 protein protein.
          Length = 447

 Score = 32.3 bits (70), Expect = 1.1
 Identities = 15/63 (23%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
 Frame = +3

Query: 312 HTNLTQREIDVLPPGTKTYESMARMFVQSD--LEHIKQNLRQKTNTLISRIDDLNNRKVC 485
           H  ++   I    P ++  ++  R+   +D  +  +  +L   T+T  SR+DD ++ ++C
Sbjct: 154 HREISSPRIQDAGPASRDVQATGRIADDADPRVALVNDSLSDVTSTTSSRVDDHDSEEIC 213

Query: 486 LNH 494
           L+H
Sbjct: 214 LDH 216


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,867,243
Number of Sequences: 237096
Number of extensions: 1417979
Number of successful extensions: 3295
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3228
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3295
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5216942984
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)