BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bmov11e14 (535 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z73103-1|CAA97424.1| 117|Caenorhabditis elegans Hypothetical pr... 42 3e-04 U42841-14|AAC48172.3| 469|Caenorhabditis elegans Hypothetical p... 29 2.1 U39849-8|AAA81050.1| 479|Caenorhabditis elegans Hypothetical pr... 29 2.8 AL033514-2|CAA22093.2| 233|Caenorhabditis elegans Hypothetical ... 28 3.7 AF172091-1|AAD48875.1| 233|Caenorhabditis elegans NOB-1B protei... 28 3.7 Z71261-4|CAA95804.1| 126|Caenorhabditis elegans Hypothetical pr... 27 6.4 U39744-4|AAK18885.4| 389|Caenorhabditis elegans Hypothetical pr... 27 8.5 >Z73103-1|CAA97424.1| 117|Caenorhabditis elegans Hypothetical protein C08F8.1 protein. Length = 117 Score = 41.9 bits (94), Expect = 3e-04 Identities = 30/111 (27%), Positives = 51/111 (45%) Frame = +3 Query: 201 DLELKQAFVDLQVLMIETKKTIENIDHQLAVLGRMQMHTNLTQREIDVLPPGTKTYESMA 380 D E+ +AF DLQ ET+ I + V + + T++ + L K Y S+ Sbjct: 3 DEEISKAFRDLQFKTNETRMRIVQGEQNKKVNYQKMRISESTKKNLVDLDENLKYYRSVG 62 Query: 381 RMFVQSDLEHIKQNLRQKTNTLISRIDDLNNRKVCLNHTLNESESNIRDLI 533 RMF+ +D + +I+ + +K L L E+E+N+R+LI Sbjct: 63 RMFLLTDKPAEISRHEAEAKQSKEKIEAIEKQKDYLEKGLVEAETNLRELI 113 >U42841-14|AAC48172.3| 469|Caenorhabditis elegans Hypothetical protein T17H7.7 protein. Length = 469 Score = 29.1 bits (62), Expect = 2.1 Identities = 20/81 (24%), Positives = 37/81 (45%), Gaps = 3/81 (3%) Frame = +3 Query: 201 DLELKQAFVDLQVLMIETKKTIENIDHQLAVLGRMQMHTNLTQREIDVL---PPGTKTYE 371 DLE+ Q F L + ETK +E ++ + +M T+ T E+ + P T T Sbjct: 188 DLEVVQLFKKLNLSKEETKSIVERVEQVVREKLMSKMDTSSTTTEVTTVVTTPSTTTTTT 247 Query: 372 SMARMFVQSDLEHIKQNLRQK 434 S + + E I++ + ++ Sbjct: 248 STTQAPTTTTKEFIEEEIEEE 268 >U39849-8|AAA81050.1| 479|Caenorhabditis elegans Hypothetical protein C06A8.5 protein. Length = 479 Score = 28.7 bits (61), Expect = 2.8 Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 6/51 (11%) Frame = +3 Query: 396 SDLEHIKQNLRQKTNTLISRIDDLNNR------KVCLNHTLNESESNIRDL 530 +D+E +K+ LRQK L DDL N+ K+ L E +RDL Sbjct: 12 ADVERLKKILRQKDEMLEEMEDDLKNQGKPCSSKLSLEERAQELSEQLRDL 62 >AL033514-2|CAA22093.2| 233|Caenorhabditis elegans Hypothetical protein Y75B8A.2a protein. Length = 233 Score = 28.3 bits (60), Expect = 3.7 Identities = 13/29 (44%), Positives = 19/29 (65%), Gaps = 1/29 (3%) Frame = -1 Query: 523 LMLDSLSFKVWFKHTFRLFKS-SMRLINV 440 LMLD KVWF+ +R + + S+ +INV Sbjct: 199 LMLDEKQVKVWFQVCYRQYSAESLEIINV 227 >AF172091-1|AAD48875.1| 233|Caenorhabditis elegans NOB-1B protein protein. Length = 233 Score = 28.3 bits (60), Expect = 3.7 Identities = 13/29 (44%), Positives = 19/29 (65%), Gaps = 1/29 (3%) Frame = -1 Query: 523 LMLDSLSFKVWFKHTFRLFKS-SMRLINV 440 LMLD KVWF+ +R + + S+ +INV Sbjct: 199 LMLDEKQVKVWFQVCYRQYSAESLEIINV 227 >Z71261-4|CAA95804.1| 126|Caenorhabditis elegans Hypothetical protein F21C3.5 protein. Length = 126 Score = 27.5 bits (58), Expect = 6.4 Identities = 15/64 (23%), Positives = 32/64 (50%), Gaps = 5/64 (7%) Frame = +3 Query: 258 KTIENIDHQLAVLGRMQMHTNLTQR-----EIDVLPPGTKTYESMARMFVQSDLEHIKQN 422 +T+E D + R +M LT+ E+D++ +K Y+ + + V+ DLE + Sbjct: 15 RTLEK-DREKYFTSRQEMEMRLTESKNVKAELDLMESDSKVYKLIGAVLVRQDLEEARST 73 Query: 423 LRQK 434 + ++ Sbjct: 74 VEKR 77 >U39744-4|AAK18885.4| 389|Caenorhabditis elegans Hypothetical protein C03F11.4 protein. Length = 389 Score = 27.1 bits (57), Expect = 8.5 Identities = 22/101 (21%), Positives = 48/101 (47%) Frame = +3 Query: 180 IKMAKTVDLELKQAFVDLQVLMIETKKTIENIDHQLAVLGRMQMHTNLTQREIDVLPPGT 359 IK K +D + +A+ Q M ++ I+ D Q ++ ++E LPP Sbjct: 122 IKKKKKLDAD--KAYELRQEQMKIRQEKIDASDRNKIYRRLAQTAVDMLRKEERKLPPEI 179 Query: 360 KTYESMARMFVQSDLEHIKQNLRQKTNTLISRIDDLNNRKV 482 K + +V++ +++ NLR + L +R+D+++ + + Sbjct: 180 KQLDEDLEYYVENSKFYLRINLRDR--YLETRVDEISEKYI 218 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 12,258,098 Number of Sequences: 27780 Number of extensions: 248078 Number of successful extensions: 575 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 553 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 575 length of database: 12,740,198 effective HSP length: 77 effective length of database: 10,601,138 effective search space used: 1060113800 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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