Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11e14
         (535 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z73103-1|CAA97424.1|  117|Caenorhabditis elegans Hypothetical pr...    42   3e-04
U42841-14|AAC48172.3|  469|Caenorhabditis elegans Hypothetical p...    29   2.1  
U39849-8|AAA81050.1|  479|Caenorhabditis elegans Hypothetical pr...    29   2.8  
AL033514-2|CAA22093.2|  233|Caenorhabditis elegans Hypothetical ...    28   3.7  
AF172091-1|AAD48875.1|  233|Caenorhabditis elegans NOB-1B protei...    28   3.7  
Z71261-4|CAA95804.1|  126|Caenorhabditis elegans Hypothetical pr...    27   6.4  
U39744-4|AAK18885.4|  389|Caenorhabditis elegans Hypothetical pr...    27   8.5  

>Z73103-1|CAA97424.1|  117|Caenorhabditis elegans Hypothetical
           protein C08F8.1 protein.
          Length = 117

 Score = 41.9 bits (94), Expect = 3e-04
 Identities = 30/111 (27%), Positives = 51/111 (45%)
 Frame = +3

Query: 201 DLELKQAFVDLQVLMIETKKTIENIDHQLAVLGRMQMHTNLTQREIDVLPPGTKTYESMA 380
           D E+ +AF DLQ    ET+  I   +    V  +    +  T++ +  L    K Y S+ 
Sbjct: 3   DEEISKAFRDLQFKTNETRMRIVQGEQNKKVNYQKMRISESTKKNLVDLDENLKYYRSVG 62

Query: 381 RMFVQSDLEHIKQNLRQKTNTLISRIDDLNNRKVCLNHTLNESESNIRDLI 533
           RMF+ +D          +      +I+ +  +K  L   L E+E+N+R+LI
Sbjct: 63  RMFLLTDKPAEISRHEAEAKQSKEKIEAIEKQKDYLEKGLVEAETNLRELI 113


>U42841-14|AAC48172.3|  469|Caenorhabditis elegans Hypothetical
           protein T17H7.7 protein.
          Length = 469

 Score = 29.1 bits (62), Expect = 2.1
 Identities = 20/81 (24%), Positives = 37/81 (45%), Gaps = 3/81 (3%)
 Frame = +3

Query: 201 DLELKQAFVDLQVLMIETKKTIENIDHQLAVLGRMQMHTNLTQREIDVL---PPGTKTYE 371
           DLE+ Q F  L +   ETK  +E ++  +      +M T+ T  E+  +   P  T T  
Sbjct: 188 DLEVVQLFKKLNLSKEETKSIVERVEQVVREKLMSKMDTSSTTTEVTTVVTTPSTTTTTT 247

Query: 372 SMARMFVQSDLEHIKQNLRQK 434
           S  +    +  E I++ + ++
Sbjct: 248 STTQAPTTTTKEFIEEEIEEE 268


>U39849-8|AAA81050.1|  479|Caenorhabditis elegans Hypothetical
           protein C06A8.5 protein.
          Length = 479

 Score = 28.7 bits (61), Expect = 2.8
 Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 6/51 (11%)
 Frame = +3

Query: 396 SDLEHIKQNLRQKTNTLISRIDDLNNR------KVCLNHTLNESESNIRDL 530
           +D+E +K+ LRQK   L    DDL N+      K+ L     E    +RDL
Sbjct: 12  ADVERLKKILRQKDEMLEEMEDDLKNQGKPCSSKLSLEERAQELSEQLRDL 62


>AL033514-2|CAA22093.2|  233|Caenorhabditis elegans Hypothetical
           protein Y75B8A.2a protein.
          Length = 233

 Score = 28.3 bits (60), Expect = 3.7
 Identities = 13/29 (44%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
 Frame = -1

Query: 523 LMLDSLSFKVWFKHTFRLFKS-SMRLINV 440
           LMLD    KVWF+  +R + + S+ +INV
Sbjct: 199 LMLDEKQVKVWFQVCYRQYSAESLEIINV 227


>AF172091-1|AAD48875.1|  233|Caenorhabditis elegans NOB-1B protein
           protein.
          Length = 233

 Score = 28.3 bits (60), Expect = 3.7
 Identities = 13/29 (44%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
 Frame = -1

Query: 523 LMLDSLSFKVWFKHTFRLFKS-SMRLINV 440
           LMLD    KVWF+  +R + + S+ +INV
Sbjct: 199 LMLDEKQVKVWFQVCYRQYSAESLEIINV 227


>Z71261-4|CAA95804.1|  126|Caenorhabditis elegans Hypothetical
           protein F21C3.5 protein.
          Length = 126

 Score = 27.5 bits (58), Expect = 6.4
 Identities = 15/64 (23%), Positives = 32/64 (50%), Gaps = 5/64 (7%)
 Frame = +3

Query: 258 KTIENIDHQLAVLGRMQMHTNLTQR-----EIDVLPPGTKTYESMARMFVQSDLEHIKQN 422
           +T+E  D +     R +M   LT+      E+D++   +K Y+ +  + V+ DLE  +  
Sbjct: 15  RTLEK-DREKYFTSRQEMEMRLTESKNVKAELDLMESDSKVYKLIGAVLVRQDLEEARST 73

Query: 423 LRQK 434
           + ++
Sbjct: 74  VEKR 77


>U39744-4|AAK18885.4|  389|Caenorhabditis elegans Hypothetical
           protein C03F11.4 protein.
          Length = 389

 Score = 27.1 bits (57), Expect = 8.5
 Identities = 22/101 (21%), Positives = 48/101 (47%)
 Frame = +3

Query: 180 IKMAKTVDLELKQAFVDLQVLMIETKKTIENIDHQLAVLGRMQMHTNLTQREIDVLPPGT 359
           IK  K +D +  +A+   Q  M   ++ I+  D         Q   ++ ++E   LPP  
Sbjct: 122 IKKKKKLDAD--KAYELRQEQMKIRQEKIDASDRNKIYRRLAQTAVDMLRKEERKLPPEI 179

Query: 360 KTYESMARMFVQSDLEHIKQNLRQKTNTLISRIDDLNNRKV 482
           K  +     +V++   +++ NLR +   L +R+D+++ + +
Sbjct: 180 KQLDEDLEYYVENSKFYLRINLRDR--YLETRVDEISEKYI 218


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,258,098
Number of Sequences: 27780
Number of extensions: 248078
Number of successful extensions: 575
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 553
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 575
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1060113800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)