Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov11e10
(643 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_01_0491 - 3884764-3885114,3885143-3885403,3885493-3885711,388... 235 3e-62
02_04_0462 + 23131433-23132836 43 2e-04
03_06_0699 - 35612919-35612989,35613079-35613319,35613506-356135... 39 0.003
04_04_1593 - 34661670-34661798,34661882-34661989,34662129-346623... 33 0.15
09_04_0730 + 19783346-19783372,19783548-19783638,19783973-197840... 32 0.45
05_06_0005 + 24802843-24803101,24804086-24804333,24804417-248045... 32 0.45
02_01_0432 - 3144560-3144655,3144792-3144832,3145019-3145094,314... 30 1.4
04_04_1015 - 30115377-30115477,30115570-30115615,30116491-301165... 30 1.8
04_04_1008 - 30054674-30054774,30054867-30054912,30055788-300558... 30 1.8
09_06_0094 - 20831530-20831997 29 3.1
12_02_1141 + 26415235-26415858 28 7.2
11_03_0183 - 11310671-11313625,11314243-11314287,11314550-11314717 27 9.6
05_07_0212 + 28434612-28435931,28436012-28436044,28436557-284366... 27 9.6
03_01_0548 + 4099386-4099847,4100435-4101316 27 9.6
03_01_0547 + 4093196-4093657,4094267-4095148 27 9.6
03_01_0544 + 4082528-4082989,4083585-4084466 27 9.6
03_01_0543 + 4076981-4077442,4078145-4079026 27 9.6
02_02_0474 + 10738476-10738797,10739568-10739677,10739891-107400... 27 9.6
01_01_0359 + 2829325-2832076,2832223-2832593,2833335-2833695,283... 27 9.6
>12_01_0491 -
3884764-3885114,3885143-3885403,3885493-3885711,
3885792-3886019,3886378-3886480,3886703-3886815,
3887262-3887323,3887915-3888104
Length = 508
Score = 235 bits (574), Expect = 3e-62
Identities = 117/147 (79%), Positives = 127/147 (86%), Gaps = 1/147 (0%)
Frame = +1
Query: 202 LHQQDLSKLDVTKLSALSPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVRFKNELE 381
L +QDLSKLDVTKL LSPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVRFKNELE
Sbjct: 34 LMKQDLSKLDVTKLHPLSPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVRFKNELE 93
Query: 382 RNITIKLGYANAKIYQCDNPKCPRPTSFISGGSSKDDSFPCLRPACTG-RFQLVRHVSFV 558
RNITIKLGYANAKIY+C++ KCPRP + + GS K+DS C P R +L+RHVSFV
Sbjct: 94 RNITIKLGYANAKIYKCEDEKCPRPMCYKAYGSGKEDSPHCDVPGFENTRMKLLRHVSFV 153
Query: 559 DCPGHDILMATMLNGAAVMDAALLLIA 639
DCPGHDILMATMLNGAA+MD ALLLIA
Sbjct: 154 DCPGHDILMATMLNGAAIMDGALLLIA 180
>02_04_0462 + 23131433-23132836
Length = 467
Score = 43.2 bits (97), Expect = 2e-04
Identities = 17/34 (50%), Positives = 24/34 (70%)
Frame = +1
Query: 541 RHVSFVDCPGHDILMATMLNGAAVMDAALLLIAG 642
RH + VDCPGH + M+ GAA MD A+L+++G
Sbjct: 133 RHYAHVDCPGHADYVKNMITGAAQMDGAILVVSG 166
Score = 35.1 bits (77), Expect = 0.048
Identities = 14/23 (60%), Positives = 19/23 (82%)
Frame = +1
Query: 283 INIGTIGHVAHGKSTVVKAISGV 351
+NIGTIGHV HGK+T+ A++ V
Sbjct: 71 VNIGTIGHVDHGKTTLTAALTMV 93
>03_06_0699 -
35612919-35612989,35613079-35613319,35613506-35613568,
35613644-35613709,35614110-35614193,35614685-35614890,
35614977-35615067,35615176-35615280,35615552-35615626,
35615728-35615820,35615914-35615989,35616115-35616305
Length = 453
Score = 39.1 bits (87), Expect = 0.003
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +1
Query: 541 RHVSFVDCPGHDILMATMLNGAAVMDAALLLIA 639
RH + VDCPGH + M+ GAA MD +L+++
Sbjct: 130 RHYAHVDCPGHADYVKNMITGAAQMDGGILVVS 162
Score = 35.9 bits (79), Expect = 0.027
Identities = 14/23 (60%), Positives = 19/23 (82%)
Frame = +1
Query: 283 INIGTIGHVAHGKSTVVKAISGV 351
+N+GTIGHV HGK+T+ AI+ V
Sbjct: 68 VNVGTIGHVDHGKTTLTAAITKV 90
>04_04_1593 -
34661670-34661798,34661882-34661989,34662129-34662368,
34662614-34662782,34662872-34663362,34663681-34663991,
34664396-34664473,34665034-34665228,34665363-34665524,
34665759-34665840
Length = 654
Score = 33.5 bits (73), Expect = 0.15
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +1
Query: 544 HVSFVDCPGHDILMATMLNGAAVMDAALLLI 636
HV +D PGH + M++GA DAA+L+I
Sbjct: 313 HVVLLDSPGHKDFVPNMISGATQSDAAILVI 343
>09_04_0730 +
19783346-19783372,19783548-19783638,19783973-19784051,
19784410-19784743,19784934-19785968,19786141-19786290,
19786781-19787215
Length = 716
Score = 31.9 bits (69), Expect = 0.45
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +1
Query: 547 VSFVDCPGHDILMATMLNGAAVMDAALLLIA 639
++F+D PGH A GAAV D +L++A
Sbjct: 247 ITFLDTPGHAAFSAMRARGAAVTDIVVLVVA 277
>05_06_0005 +
24802843-24803101,24804086-24804333,24804417-24804572,
24804956-24805114,24805862-24805929,24806044-24806433,
24806515-24806563,24806636-24806788,24807416-24807589,
24808207-24808362,24808705-24808756,24808830-24808988,
24809058-24809094,24809218-24809252,24809349-24809400,
24809614-24809663,24810590-24811924,24812688-24812825,
24812907-24812957,24813081-24814237
Length = 1625
Score = 31.9 bits (69), Expect = 0.45
Identities = 20/80 (25%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
Frame = +1
Query: 265 ISRQATINIGTIGHVAHGKSTVVKAI-SGVQTVRFKNELERNITIKLGYANAKIYQCDNP 441
+ + +T+ + GH GK VVK + G+ + ++E E + G+ A+ C+N
Sbjct: 536 VPKSSTVTVLRTGHDGEGKQGVVKHLYMGILFIHNESESENS-----GFFCAQCSSCENV 590
Query: 442 KCPRPTSFISGGSSKDDSFP 501
K + + + G+S D+ P
Sbjct: 591 KKRKELASFTFGNSDDNPIP 610
>02_01_0432 -
3144560-3144655,3144792-3144832,3145019-3145094,
3145465-3145542,3146121-3146208,3146613-3146686,
3147445-3147579,3147699-3147770,3148239-3148325,
3148418-3148522,3149028-3149085,3149576-3149634,
3149960-3150056,3150217-3150317,3150443-3150487,
3150619-3150681,3151082-3151147,3151286-3151342,
3151570-3151656,3152063-3152239,3152413-3152625
Length = 624
Score = 30.3 bits (65), Expect = 1.4
Identities = 23/66 (34%), Positives = 29/66 (43%), Gaps = 12/66 (18%)
Frame = +1
Query: 286 NIGTIGHVAHGKSTVV-KAISGVQTVRFKN-----------ELERNITIKLGYANAKIYQ 429
N I H+ HGKST+ K + TV+ + E ER ITIKL A +
Sbjct: 79 NFSIIAHIDHGKSTLADKLLELTGTVQKREMKQQFLDNMDLERERGITIKLQAARMRYIM 138
Query: 430 CDNPKC 447
D P C
Sbjct: 139 NDEPYC 144
>04_04_1015 -
30115377-30115477,30115570-30115615,30116491-30116590,
30116676-30116771,30119519-30119556,30119623-30119733,
30119820-30119951,30120024-30120263,30120532-30120700,
30120994-30121493,30121581-30121691,30121802-30122133,
30122603-30122737,30122839-30122988,30123809-30123947
Length = 799
Score = 29.9 bits (64), Expect = 1.8
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +1
Query: 547 VSFVDCPGHDILMATMLNGAAVMDAALLLI 636
V +D PGH + M++GA DAA+L++
Sbjct: 327 VVLLDSPGHKDFVPNMISGATQADAAILVV 356
>04_04_1008 -
30054674-30054774,30054867-30054912,30055788-30055887,
30055973-30056068,30058816-30058853,30058920-30059030,
30059117-30059248,30059321-30059560,30059829-30059997,
30060291-30060790,30060878-30060988,30061099-30061430,
30061900-30062034,30062136-30062285,30063106-30063244
Length = 799
Score = 29.9 bits (64), Expect = 1.8
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +1
Query: 547 VSFVDCPGHDILMATMLNGAAVMDAALLLI 636
V +D PGH + M++GA DAA+L++
Sbjct: 327 VVLLDSPGHKDFVPNMISGATQADAAILVV 356
>09_06_0094 - 20831530-20831997
Length = 155
Score = 29.1 bits (62), Expect = 3.1
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +3
Query: 528 LPTSSPRELCRLPWSRHP 581
+PT+ P L LPW RHP
Sbjct: 1 MPTAPPPVLLHLPWQRHP 18
>12_02_1141 + 26415235-26415858
Length = 207
Score = 27.9 bits (59), Expect = 7.2
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +1
Query: 181 GRTTQSNLHQQDLSKLDVTKLSALSP 258
G T + H QDLS+ +V K+S L P
Sbjct: 80 GETYYTRYHDQDLSEFNVDKVSPLPP 105
>11_03_0183 - 11310671-11313625,11314243-11314287,11314550-11314717
Length = 1055
Score = 27.5 bits (58), Expect = 9.6
Identities = 14/68 (20%), Positives = 31/68 (45%)
Frame = +1
Query: 139 KYNRSNTTIMASNEGRTTQSNLHQQDLSKLDVTKLSALSPEVISRQATINIGTIGHVAHG 318
K + +T + R + + + KLD + P+ +SR++T +G + H A G
Sbjct: 674 KRSMDASTEKLEDPDRDLEDTMKTRKRKKLDTLGDLSSQPQPVSRKSTTKVGELMHKAAG 733
Query: 319 KSTVVKAI 342
+ + + +
Sbjct: 734 QMSQTRPV 741
>05_07_0212 +
28434612-28435931,28436012-28436044,28436557-28436670,
28436767-28437102,28437221-28437283,28437364-28437519,
28437650-28437715,28439074-28439310,28439403-28439678,
28440060-28440248,28440459-28440620
Length = 983
Score = 27.5 bits (58), Expect = 9.6
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +1
Query: 553 FVDCPGHDILMATMLNGAAVMDAALLLIA 639
F+D PGH+ A GA V D +++++
Sbjct: 482 FLDTPGHEAFGAMRARGARVTDICIIVVS 510
>03_01_0548 + 4099386-4099847,4100435-4101316
Length = 447
Score = 27.5 bits (58), Expect = 9.6
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +1
Query: 544 HVSFVDCPGHDILMATMLNGAAVMDAALLLI 636
+ + +D PGH + M+ G + D A+L+I
Sbjct: 86 YCTVIDAPGHRDFIKNMITGTSQADCAVLII 116
>03_01_0547 + 4093196-4093657,4094267-4095148
Length = 447
Score = 27.5 bits (58), Expect = 9.6
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +1
Query: 544 HVSFVDCPGHDILMATMLNGAAVMDAALLLI 636
+ + +D PGH + M+ G + D A+L+I
Sbjct: 86 YCTVIDAPGHRDFIKNMITGTSQADCAVLII 116
>03_01_0544 + 4082528-4082989,4083585-4084466
Length = 447
Score = 27.5 bits (58), Expect = 9.6
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +1
Query: 544 HVSFVDCPGHDILMATMLNGAAVMDAALLLI 636
+ + +D PGH + M+ G + D A+L+I
Sbjct: 86 YCTVIDAPGHRDFIKNMITGTSQADCAVLII 116
>03_01_0543 + 4076981-4077442,4078145-4079026
Length = 447
Score = 27.5 bits (58), Expect = 9.6
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +1
Query: 544 HVSFVDCPGHDILMATMLNGAAVMDAALLLI 636
+ + +D PGH + M+ G + D A+L+I
Sbjct: 86 YCTVIDAPGHRDFIKNMITGTSQADCAVLII 116
>02_02_0474 +
10738476-10738797,10739568-10739677,10739891-10740094,
10740400-10740576,10740659-10740811,10741535-10741624,
10741939-10742049,10742169-10742285,10742881-10743032,
10743116-10743200,10743597-10743691,10744211-10744376,
10744459-10744654,10745662-10745795
Length = 703
Score = 27.5 bits (58), Expect = 9.6
Identities = 17/69 (24%), Positives = 32/69 (46%), Gaps = 5/69 (7%)
Frame = +1
Query: 151 SNTTIMASNEGRTTQSNLHQQDLSKLDVTKLSALSPEV-----ISRQATINIGTIGHVAH 315
S+ +++A+ R + + + LD SP +R+ NI + HV H
Sbjct: 71 SSVSVVAAGRSRRRSARSSLRASASLDQEVKERASPAAGKSGQATRRDVRNIAIVAHVDH 130
Query: 316 GKSTVVKAI 342
GK+T+V ++
Sbjct: 131 GKTTLVDSM 139
>01_01_0359 +
2829325-2832076,2832223-2832593,2833335-2833695,
2833799-2833868,2834021-2834108,2834325-2834580,
2834758-2834883,2835217-2835425
Length = 1410
Score = 27.5 bits (58), Expect = 9.6
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +3
Query: 492 QLSVSSACVYGSLPTSSPRELCRLPWSRHPYGNYA 596
+L++SS +YG +PTS R L RL W Y +++
Sbjct: 98 RLNLSSNGLYGEIPTSIGR-LRRLQWLNLSYNSFS 131
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,103,704
Number of Sequences: 37544
Number of extensions: 322244
Number of successful extensions: 771
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 749
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 769
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1584867848
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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