SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11e10
         (643 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_0491 - 3884764-3885114,3885143-3885403,3885493-3885711,388...   235   3e-62
02_04_0462 + 23131433-23132836                                         43   2e-04
03_06_0699 - 35612919-35612989,35613079-35613319,35613506-356135...    39   0.003
04_04_1593 - 34661670-34661798,34661882-34661989,34662129-346623...    33   0.15 
09_04_0730 + 19783346-19783372,19783548-19783638,19783973-197840...    32   0.45 
05_06_0005 + 24802843-24803101,24804086-24804333,24804417-248045...    32   0.45 
02_01_0432 - 3144560-3144655,3144792-3144832,3145019-3145094,314...    30   1.4  
04_04_1015 - 30115377-30115477,30115570-30115615,30116491-301165...    30   1.8  
04_04_1008 - 30054674-30054774,30054867-30054912,30055788-300558...    30   1.8  
09_06_0094 - 20831530-20831997                                         29   3.1  
12_02_1141 + 26415235-26415858                                         28   7.2  
11_03_0183 - 11310671-11313625,11314243-11314287,11314550-11314717     27   9.6  
05_07_0212 + 28434612-28435931,28436012-28436044,28436557-284366...    27   9.6  
03_01_0548 + 4099386-4099847,4100435-4101316                           27   9.6  
03_01_0547 + 4093196-4093657,4094267-4095148                           27   9.6  
03_01_0544 + 4082528-4082989,4083585-4084466                           27   9.6  
03_01_0543 + 4076981-4077442,4078145-4079026                           27   9.6  
02_02_0474 + 10738476-10738797,10739568-10739677,10739891-107400...    27   9.6  
01_01_0359 + 2829325-2832076,2832223-2832593,2833335-2833695,283...    27   9.6  

>12_01_0491 -
           3884764-3885114,3885143-3885403,3885493-3885711,
           3885792-3886019,3886378-3886480,3886703-3886815,
           3887262-3887323,3887915-3888104
          Length = 508

 Score =  235 bits (574), Expect = 3e-62
 Identities = 117/147 (79%), Positives = 127/147 (86%), Gaps = 1/147 (0%)
 Frame = +1

Query: 202 LHQQDLSKLDVTKLSALSPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVRFKNELE 381
           L +QDLSKLDVTKL  LSPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVRFKNELE
Sbjct: 34  LMKQDLSKLDVTKLHPLSPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVRFKNELE 93

Query: 382 RNITIKLGYANAKIYQCDNPKCPRPTSFISGGSSKDDSFPCLRPACTG-RFQLVRHVSFV 558
           RNITIKLGYANAKIY+C++ KCPRP  + + GS K+DS  C  P     R +L+RHVSFV
Sbjct: 94  RNITIKLGYANAKIYKCEDEKCPRPMCYKAYGSGKEDSPHCDVPGFENTRMKLLRHVSFV 153

Query: 559 DCPGHDILMATMLNGAAVMDAALLLIA 639
           DCPGHDILMATMLNGAA+MD ALLLIA
Sbjct: 154 DCPGHDILMATMLNGAAIMDGALLLIA 180


>02_04_0462 + 23131433-23132836
          Length = 467

 Score = 43.2 bits (97), Expect = 2e-04
 Identities = 17/34 (50%), Positives = 24/34 (70%)
 Frame = +1

Query: 541 RHVSFVDCPGHDILMATMLNGAAVMDAALLLIAG 642
           RH + VDCPGH   +  M+ GAA MD A+L+++G
Sbjct: 133 RHYAHVDCPGHADYVKNMITGAAQMDGAILVVSG 166



 Score = 35.1 bits (77), Expect = 0.048
 Identities = 14/23 (60%), Positives = 19/23 (82%)
 Frame = +1

Query: 283 INIGTIGHVAHGKSTVVKAISGV 351
           +NIGTIGHV HGK+T+  A++ V
Sbjct: 71  VNIGTIGHVDHGKTTLTAALTMV 93


>03_06_0699 -
           35612919-35612989,35613079-35613319,35613506-35613568,
           35613644-35613709,35614110-35614193,35614685-35614890,
           35614977-35615067,35615176-35615280,35615552-35615626,
           35615728-35615820,35615914-35615989,35616115-35616305
          Length = 453

 Score = 39.1 bits (87), Expect = 0.003
 Identities = 15/33 (45%), Positives = 22/33 (66%)
 Frame = +1

Query: 541 RHVSFVDCPGHDILMATMLNGAAVMDAALLLIA 639
           RH + VDCPGH   +  M+ GAA MD  +L+++
Sbjct: 130 RHYAHVDCPGHADYVKNMITGAAQMDGGILVVS 162



 Score = 35.9 bits (79), Expect = 0.027
 Identities = 14/23 (60%), Positives = 19/23 (82%)
 Frame = +1

Query: 283 INIGTIGHVAHGKSTVVKAISGV 351
           +N+GTIGHV HGK+T+  AI+ V
Sbjct: 68  VNVGTIGHVDHGKTTLTAAITKV 90


>04_04_1593 -
           34661670-34661798,34661882-34661989,34662129-34662368,
           34662614-34662782,34662872-34663362,34663681-34663991,
           34664396-34664473,34665034-34665228,34665363-34665524,
           34665759-34665840
          Length = 654

 Score = 33.5 bits (73), Expect = 0.15
 Identities = 14/31 (45%), Positives = 20/31 (64%)
 Frame = +1

Query: 544 HVSFVDCPGHDILMATMLNGAAVMDAALLLI 636
           HV  +D PGH   +  M++GA   DAA+L+I
Sbjct: 313 HVVLLDSPGHKDFVPNMISGATQSDAAILVI 343


>09_04_0730 +
           19783346-19783372,19783548-19783638,19783973-19784051,
           19784410-19784743,19784934-19785968,19786141-19786290,
           19786781-19787215
          Length = 716

 Score = 31.9 bits (69), Expect = 0.45
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = +1

Query: 547 VSFVDCPGHDILMATMLNGAAVMDAALLLIA 639
           ++F+D PGH    A    GAAV D  +L++A
Sbjct: 247 ITFLDTPGHAAFSAMRARGAAVTDIVVLVVA 277


>05_06_0005 +
           24802843-24803101,24804086-24804333,24804417-24804572,
           24804956-24805114,24805862-24805929,24806044-24806433,
           24806515-24806563,24806636-24806788,24807416-24807589,
           24808207-24808362,24808705-24808756,24808830-24808988,
           24809058-24809094,24809218-24809252,24809349-24809400,
           24809614-24809663,24810590-24811924,24812688-24812825,
           24812907-24812957,24813081-24814237
          Length = 1625

 Score = 31.9 bits (69), Expect = 0.45
 Identities = 20/80 (25%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
 Frame = +1

Query: 265 ISRQATINIGTIGHVAHGKSTVVKAI-SGVQTVRFKNELERNITIKLGYANAKIYQCDNP 441
           + + +T+ +   GH   GK  VVK +  G+  +  ++E E +     G+  A+   C+N 
Sbjct: 536 VPKSSTVTVLRTGHDGEGKQGVVKHLYMGILFIHNESESENS-----GFFCAQCSSCENV 590

Query: 442 KCPRPTSFISGGSSKDDSFP 501
           K  +  +  + G+S D+  P
Sbjct: 591 KKRKELASFTFGNSDDNPIP 610


>02_01_0432 -
           3144560-3144655,3144792-3144832,3145019-3145094,
           3145465-3145542,3146121-3146208,3146613-3146686,
           3147445-3147579,3147699-3147770,3148239-3148325,
           3148418-3148522,3149028-3149085,3149576-3149634,
           3149960-3150056,3150217-3150317,3150443-3150487,
           3150619-3150681,3151082-3151147,3151286-3151342,
           3151570-3151656,3152063-3152239,3152413-3152625
          Length = 624

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 23/66 (34%), Positives = 29/66 (43%), Gaps = 12/66 (18%)
 Frame = +1

Query: 286 NIGTIGHVAHGKSTVV-KAISGVQTVRFKN-----------ELERNITIKLGYANAKIYQ 429
           N   I H+ HGKST+  K +    TV+ +            E ER ITIKL  A  +   
Sbjct: 79  NFSIIAHIDHGKSTLADKLLELTGTVQKREMKQQFLDNMDLERERGITIKLQAARMRYIM 138

Query: 430 CDNPKC 447
            D P C
Sbjct: 139 NDEPYC 144


>04_04_1015 -
           30115377-30115477,30115570-30115615,30116491-30116590,
           30116676-30116771,30119519-30119556,30119623-30119733,
           30119820-30119951,30120024-30120263,30120532-30120700,
           30120994-30121493,30121581-30121691,30121802-30122133,
           30122603-30122737,30122839-30122988,30123809-30123947
          Length = 799

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = +1

Query: 547 VSFVDCPGHDILMATMLNGAAVMDAALLLI 636
           V  +D PGH   +  M++GA   DAA+L++
Sbjct: 327 VVLLDSPGHKDFVPNMISGATQADAAILVV 356


>04_04_1008 -
           30054674-30054774,30054867-30054912,30055788-30055887,
           30055973-30056068,30058816-30058853,30058920-30059030,
           30059117-30059248,30059321-30059560,30059829-30059997,
           30060291-30060790,30060878-30060988,30061099-30061430,
           30061900-30062034,30062136-30062285,30063106-30063244
          Length = 799

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = +1

Query: 547 VSFVDCPGHDILMATMLNGAAVMDAALLLI 636
           V  +D PGH   +  M++GA   DAA+L++
Sbjct: 327 VVLLDSPGHKDFVPNMISGATQADAAILVV 356


>09_06_0094 - 20831530-20831997
          Length = 155

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +3

Query: 528 LPTSSPRELCRLPWSRHP 581
           +PT+ P  L  LPW RHP
Sbjct: 1   MPTAPPPVLLHLPWQRHP 18


>12_02_1141 + 26415235-26415858
          Length = 207

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = +1

Query: 181 GRTTQSNLHQQDLSKLDVTKLSALSP 258
           G T  +  H QDLS+ +V K+S L P
Sbjct: 80  GETYYTRYHDQDLSEFNVDKVSPLPP 105


>11_03_0183 - 11310671-11313625,11314243-11314287,11314550-11314717
          Length = 1055

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 14/68 (20%), Positives = 31/68 (45%)
 Frame = +1

Query: 139 KYNRSNTTIMASNEGRTTQSNLHQQDLSKLDVTKLSALSPEVISRQATINIGTIGHVAHG 318
           K +   +T    +  R  +  +  +   KLD     +  P+ +SR++T  +G + H A G
Sbjct: 674 KRSMDASTEKLEDPDRDLEDTMKTRKRKKLDTLGDLSSQPQPVSRKSTTKVGELMHKAAG 733

Query: 319 KSTVVKAI 342
           + +  + +
Sbjct: 734 QMSQTRPV 741


>05_07_0212 +
           28434612-28435931,28436012-28436044,28436557-28436670,
           28436767-28437102,28437221-28437283,28437364-28437519,
           28437650-28437715,28439074-28439310,28439403-28439678,
           28440060-28440248,28440459-28440620
          Length = 983

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = +1

Query: 553 FVDCPGHDILMATMLNGAAVMDAALLLIA 639
           F+D PGH+   A    GA V D  +++++
Sbjct: 482 FLDTPGHEAFGAMRARGARVTDICIIVVS 510


>03_01_0548 + 4099386-4099847,4100435-4101316
          Length = 447

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 10/31 (32%), Positives = 18/31 (58%)
 Frame = +1

Query: 544 HVSFVDCPGHDILMATMLNGAAVMDAALLLI 636
           + + +D PGH   +  M+ G +  D A+L+I
Sbjct: 86  YCTVIDAPGHRDFIKNMITGTSQADCAVLII 116


>03_01_0547 + 4093196-4093657,4094267-4095148
          Length = 447

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 10/31 (32%), Positives = 18/31 (58%)
 Frame = +1

Query: 544 HVSFVDCPGHDILMATMLNGAAVMDAALLLI 636
           + + +D PGH   +  M+ G +  D A+L+I
Sbjct: 86  YCTVIDAPGHRDFIKNMITGTSQADCAVLII 116


>03_01_0544 + 4082528-4082989,4083585-4084466
          Length = 447

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 10/31 (32%), Positives = 18/31 (58%)
 Frame = +1

Query: 544 HVSFVDCPGHDILMATMLNGAAVMDAALLLI 636
           + + +D PGH   +  M+ G +  D A+L+I
Sbjct: 86  YCTVIDAPGHRDFIKNMITGTSQADCAVLII 116


>03_01_0543 + 4076981-4077442,4078145-4079026
          Length = 447

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 10/31 (32%), Positives = 18/31 (58%)
 Frame = +1

Query: 544 HVSFVDCPGHDILMATMLNGAAVMDAALLLI 636
           + + +D PGH   +  M+ G +  D A+L+I
Sbjct: 86  YCTVIDAPGHRDFIKNMITGTSQADCAVLII 116


>02_02_0474 +
           10738476-10738797,10739568-10739677,10739891-10740094,
           10740400-10740576,10740659-10740811,10741535-10741624,
           10741939-10742049,10742169-10742285,10742881-10743032,
           10743116-10743200,10743597-10743691,10744211-10744376,
           10744459-10744654,10745662-10745795
          Length = 703

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 17/69 (24%), Positives = 32/69 (46%), Gaps = 5/69 (7%)
 Frame = +1

Query: 151 SNTTIMASNEGRTTQSNLHQQDLSKLDVTKLSALSPEV-----ISRQATINIGTIGHVAH 315
           S+ +++A+   R   +    +  + LD       SP        +R+   NI  + HV H
Sbjct: 71  SSVSVVAAGRSRRRSARSSLRASASLDQEVKERASPAAGKSGQATRRDVRNIAIVAHVDH 130

Query: 316 GKSTVVKAI 342
           GK+T+V ++
Sbjct: 131 GKTTLVDSM 139


>01_01_0359 +
           2829325-2832076,2832223-2832593,2833335-2833695,
           2833799-2833868,2834021-2834108,2834325-2834580,
           2834758-2834883,2835217-2835425
          Length = 1410

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 14/35 (40%), Positives = 22/35 (62%)
 Frame = +3

Query: 492 QLSVSSACVYGSLPTSSPRELCRLPWSRHPYGNYA 596
           +L++SS  +YG +PTS  R L RL W    Y +++
Sbjct: 98  RLNLSSNGLYGEIPTSIGR-LRRLQWLNLSYNSFS 131


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,103,704
Number of Sequences: 37544
Number of extensions: 322244
Number of successful extensions: 771
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 749
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 769
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1584867848
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -