BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bmov11e10 (643 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical ... 233 1e-61 U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 47 1e-05 AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 47 1e-05 D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 40 0.002 D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 40 0.002 AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 40 0.002 Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 36 0.033 Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 36 0.033 Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 33 0.17 Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical pr... 31 0.53 Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 31 0.70 U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 30 1.2 U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 30 1.2 U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 30 1.2 U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 30 1.2 Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical p... 28 4.9 AC024765-2|AAF60523.3| 345|Caenorhabditis elegans Hypothetical ... 27 8.6 >AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical protein Y39G10AR.8 protein. Length = 469 Score = 233 bits (569), Expect = 1e-61 Identities = 116/160 (72%), Positives = 126/160 (78%), Gaps = 1/160 (0%) Frame = +1 Query: 166 MASN-EGRTTQSNLHQQDLSKLDVTKLSALSPEVISRQATINIGTIGHVAHGKSTVVKAI 342 MAS E QS L +QDL K+ V L+ L+ EVISRQATINIGTIGHVAHGKST+VKA Sbjct: 1 MASEAEKDKCQSWLAKQDLDKVGVDNLNPLTEEVISRQATINIGTIGHVAHGKSTLVKAF 60 Query: 343 SGVQTVRFKNELERNITIKLGYANAKIYQCDNPKCPRPTSFISGGSSKDDSFPCLRPACT 522 SGV TV+FK ELERNITIKLGYANAKIY+C N +CPRP + S GSS D FPC R C Sbjct: 61 SGVHTVKFKRELERNITIKLGYANAKIYRCSNQECPRPGCYRSAGSSTPDRFPCERAGCG 120 Query: 523 GRFQLVRHVSFVDCPGHDILMATMLNGAAVMDAALLLIAG 642 G F VRHVSFVDCPGHDILMATMLNGAAVMDAA LL+AG Sbjct: 121 GEFTCVRHVSFVDCPGHDILMATMLNGAAVMDAAFLLVAG 160 >U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation factor (ef-tu), mitochondrialprotein 2 protein. Length = 439 Score = 47.2 bits (107), Expect = 1e-05 Identities = 38/119 (31%), Positives = 54/119 (45%) Frame = +1 Query: 283 INIGTIGHVAHGKSTVVKAISGVQTVRFKNELERNITIKLGYANAKIYQCDNPKCPRPTS 462 +N+GTIGH+ HGK+T+ AI+ VQ K G+ AK + D Sbjct: 46 VNVGTIGHIDHGKTTLTSAITRVQA-------------KKGF--AKHIKFDE-------- 82 Query: 463 FISGGSSKDDSFPCLRPACTGRFQLVRHVSFVDCPGHDILMATMLNGAAVMDAALLLIA 639 I G + + A G +R S DCPGH + M+ G + MD A+L+IA Sbjct: 83 -IDKGKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIA 140 >AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial elongation factorTu homologue protein. Length = 439 Score = 47.2 bits (107), Expect = 1e-05 Identities = 38/119 (31%), Positives = 54/119 (45%) Frame = +1 Query: 283 INIGTIGHVAHGKSTVVKAISGVQTVRFKNELERNITIKLGYANAKIYQCDNPKCPRPTS 462 +N+GTIGH+ HGK+T+ AI+ VQ K G+ AK + D Sbjct: 46 VNVGTIGHIDHGKTTLTSAITRVQA-------------KKGF--AKHIKFDE-------- 82 Query: 463 FISGGSSKDDSFPCLRPACTGRFQLVRHVSFVDCPGHDILMATMLNGAAVMDAALLLIA 639 I G + + A G +R S DCPGH + M+ G + MD A+L+IA Sbjct: 83 -IDKGKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIA 140 >D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor Tu homologueprecursor protein. Length = 495 Score = 39.9 bits (89), Expect = 0.002 Identities = 15/33 (45%), Positives = 23/33 (69%) Frame = +1 Query: 541 RHVSFVDCPGHDILMATMLNGAAVMDAALLLIA 639 RH + +DCPGH + M+ GAA M+ A+L++A Sbjct: 112 RHYAHIDCPGHADYIKNMITGAAQMEGAILVVA 144 Score = 35.5 bits (78), Expect = 0.033 Identities = 13/23 (56%), Positives = 19/23 (82%) Frame = +1 Query: 283 INIGTIGHVAHGKSTVVKAISGV 351 +N+GTIGHV HGK+T+ AI+ + Sbjct: 50 LNVGTIGHVDHGKTTLTSAITKI 72 >D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor Tu homologueprecursor protein. Length = 496 Score = 39.9 bits (89), Expect = 0.002 Identities = 15/33 (45%), Positives = 23/33 (69%) Frame = +1 Query: 541 RHVSFVDCPGHDILMATMLNGAAVMDAALLLIA 639 RH + +DCPGH + M+ GAA M+ A+L++A Sbjct: 113 RHYAHIDCPGHADYIKNMITGAAQMEGAILVVA 145 Score = 35.5 bits (78), Expect = 0.033 Identities = 13/23 (56%), Positives = 19/23 (82%) Frame = +1 Query: 283 INIGTIGHVAHGKSTVVKAISGV 351 +N+GTIGHV HGK+T+ AI+ + Sbjct: 51 LNVGTIGHVDHGKTTLTSAITKI 73 >AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation factor (ef-tu), mitochondrialprotein 1 protein. Length = 496 Score = 39.9 bits (89), Expect = 0.002 Identities = 15/33 (45%), Positives = 23/33 (69%) Frame = +1 Query: 541 RHVSFVDCPGHDILMATMLNGAAVMDAALLLIA 639 RH + +DCPGH + M+ GAA M+ A+L++A Sbjct: 113 RHYAHIDCPGHADYIKNMITGAAQMEGAILVVA 145 Score = 35.5 bits (78), Expect = 0.033 Identities = 13/23 (56%), Positives = 19/23 (82%) Frame = +1 Query: 283 INIGTIGHVAHGKSTVVKAISGV 351 +N+GTIGHV HGK+T+ AI+ + Sbjct: 51 LNVGTIGHVDHGKTTLTSAITKI 73 >Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical protein K07A12.4b protein. Length = 592 Score = 35.5 bits (78), Expect = 0.033 Identities = 41/168 (24%), Positives = 70/168 (41%), Gaps = 8/168 (4%) Frame = +1 Query: 157 TTIMASNEGRTTQSNLHQ-QDLSKLDVTKLSALSPEVISRQATINIGTIGHVAHGKSTVV 333 T S+E T +Q Q+++K P V + IN+ +GHV GKST++ Sbjct: 129 TVSRPSSEVDLTSFRRNQLQNIAKAPSVARKTPKPRVADKDL-INLIVVGHVDAGKSTLM 187 Query: 334 -------KAISGVQTVRFKNELERNITIKLGYANAKIYQCDNPKCPRPTSFISGGSSKDD 492 + + +FK+E RN K +A A + + R + G +S + Sbjct: 188 GHLLHDLEVVDSRTIDKFKHEAARNG--KASFAYAWVLDETEEERERGVTMDIGRTSFET 245 Query: 493 SFPCLRPACTGRFQLVRHVSFVDCPGHDILMATMLNGAAVMDAALLLI 636 S R + +D PGH ++ M+ G + DAA+L++ Sbjct: 246 SH--------------RRIVLLDAPGHKDFISNMITGTSQADAAILVV 279 >Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical protein K07A12.4a protein. Length = 610 Score = 35.5 bits (78), Expect = 0.033 Identities = 41/168 (24%), Positives = 70/168 (41%), Gaps = 8/168 (4%) Frame = +1 Query: 157 TTIMASNEGRTTQSNLHQ-QDLSKLDVTKLSALSPEVISRQATINIGTIGHVAHGKSTVV 333 T S+E T +Q Q+++K P V + IN+ +GHV GKST++ Sbjct: 147 TVSRPSSEVDLTSFRRNQLQNIAKAPSVARKTPKPRVADKDL-INLIVVGHVDAGKSTLM 205 Query: 334 -------KAISGVQTVRFKNELERNITIKLGYANAKIYQCDNPKCPRPTSFISGGSSKDD 492 + + +FK+E RN K +A A + + R + G +S + Sbjct: 206 GHLLHDLEVVDSRTIDKFKHEAARNG--KASFAYAWVLDETEEERERGVTMDIGRTSFET 263 Query: 493 SFPCLRPACTGRFQLVRHVSFVDCPGHDILMATMLNGAAVMDAALLLI 636 S R + +D PGH ++ M+ G + DAA+L++ Sbjct: 264 SH--------------RRIVLLDAPGHKDFISNMITGTSQADAAILVV 297 >Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical protein C47B2.7b protein. Length = 500 Score = 33.1 bits (72), Expect = 0.17 Identities = 12/32 (37%), Positives = 21/32 (65%) Frame = +1 Query: 541 RHVSFVDCPGHDILMATMLNGAAVMDAALLLI 636 R ++ +DCPGH L+ +L + V D A+++I Sbjct: 72 RRLALIDCPGHSGLIRAVLAASTVFDMAIVII 103 Score = 28.7 bits (61), Expect = 3.7 Identities = 11/30 (36%), Positives = 18/30 (60%) Frame = +1 Query: 256 PEVISRQATINIGTIGHVAHGKSTVVKAIS 345 P S +N+G +GHV GK+T+ + I+ Sbjct: 5 PSTSSSVGPLNLGILGHVDSGKTTLTRRIA 34 >Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical protein C47B2.7a protein. Length = 459 Score = 31.5 bits (68), Expect = 0.53 Identities = 11/31 (35%), Positives = 20/31 (64%) Frame = +1 Query: 541 RHVSFVDCPGHDILMATMLNGAAVMDAALLL 633 R ++ +DCPGH L+ +L + V D A+++ Sbjct: 72 RRLALIDCPGHSGLIRAVLAASTVFDMAIVI 102 Score = 28.7 bits (61), Expect = 3.7 Identities = 11/30 (36%), Positives = 18/30 (60%) Frame = +1 Query: 256 PEVISRQATINIGTIGHVAHGKSTVVKAIS 345 P S +N+G +GHV GK+T+ + I+ Sbjct: 5 PSTSSSVGPLNLGILGHVDSGKTTLTRRIA 34 >Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical protein H19N07.1 protein. Length = 532 Score = 31.1 bits (67), Expect = 0.70 Identities = 13/33 (39%), Positives = 20/33 (60%) Frame = +1 Query: 541 RHVSFVDCPGHDILMATMLNGAAVMDAALLLIA 639 RH + +D PGH + M+ GA D A+L+I+ Sbjct: 187 RHFTILDAPGHKSFVPNMIVGANQADLAVLVIS 219 >U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor protein 4, isoformc protein. Length = 267 Score = 30.3 bits (65), Expect = 1.2 Identities = 10/32 (31%), Positives = 20/32 (62%) Frame = +1 Query: 544 HVSFVDCPGHDILMATMLNGAAVMDAALLLIA 639 +++ +D PGH + M+ G + D A+L++A Sbjct: 86 YITIIDAPGHRDFIKNMITGTSQADCAVLVVA 117 >U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor protein 4, isoformd protein. Length = 429 Score = 30.3 bits (65), Expect = 1.2 Identities = 10/32 (31%), Positives = 20/32 (62%) Frame = +1 Query: 544 HVSFVDCPGHDILMATMLNGAAVMDAALLLIA 639 +++ +D PGH + M+ G + D A+L++A Sbjct: 86 YITIIDAPGHRDFIKNMITGTSQADCAVLVVA 117 >U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor protein 4, isoforma protein. Length = 463 Score = 30.3 bits (65), Expect = 1.2 Identities = 10/32 (31%), Positives = 20/32 (62%) Frame = +1 Query: 544 HVSFVDCPGHDILMATMLNGAAVMDAALLLIA 639 +++ +D PGH + M+ G + D A+L++A Sbjct: 86 YITIIDAPGHRDFIKNMITGTSQADCAVLVVA 117 >U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor protein 3 protein. Length = 463 Score = 30.3 bits (65), Expect = 1.2 Identities = 10/32 (31%), Positives = 20/32 (62%) Frame = +1 Query: 544 HVSFVDCPGHDILMATMLNGAAVMDAALLLIA 639 +++ +D PGH + M+ G + D A+L++A Sbjct: 86 YITIIDAPGHRDFIKNMITGTSQADCAVLVVA 117 >Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical protein F46B6.6a protein. Length = 702 Score = 28.3 bits (60), Expect = 4.9 Identities = 12/33 (36%), Positives = 18/33 (54%) Frame = +1 Query: 541 RHVSFVDCPGHDILMATMLNGAAVMDAALLLIA 639 R V+F+D PGH + GA D +L++A Sbjct: 204 RRVTFLDTPGHAAFASMRARGAKGADIVVLVVA 236 Score = 27.5 bits (58), Expect = 8.6 Identities = 13/34 (38%), Positives = 22/34 (64%) Frame = +1 Query: 253 SPEVISRQATINIGTIGHVAHGKSTVVKAISGVQ 354 SP+ + R+ I + +GHV HGK+T++ A+ Q Sbjct: 148 SPKDLERRPPI-VTIMGHVDHGKTTLLDAMRNSQ 180 >AC024765-2|AAF60523.3| 345|Caenorhabditis elegans Hypothetical protein Y39A3CR.6 protein. Length = 345 Score = 27.5 bits (58), Expect = 8.6 Identities = 12/29 (41%), Positives = 17/29 (58%) Frame = +1 Query: 442 KCPRPTSFISGGSSKDDSFPCLRPACTGR 528 K P+SF+S GSS + P ++P T R Sbjct: 240 KVSSPSSFLSPGSSTSSTVPNVKPTVTRR 268 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 13,987,319 Number of Sequences: 27780 Number of extensions: 282471 Number of successful extensions: 712 Number of sequences better than 10.0: 17 Number of HSP's better than 10.0 without gapping: 668 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 712 length of database: 12,740,198 effective HSP length: 78 effective length of database: 10,573,358 effective search space used: 1427403330 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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