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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11e08
         (612 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_0642 + 5414964-5415410,5415535-5416677                           32   0.41 
01_01_0012 + 71903-72935,73468-73981,74619-76008                       31   0.54 
03_06_0493 + 34315867-34316124,34316194-34316256,34317346-343176...    31   0.72 
02_01_0743 - 5530184-5531078,5531160-5531405,5531815-5532450,553...    31   0.95 
06_02_0187 + 12805788-12807007,12807059-12807186,12807811-128078...    28   1.2  
03_02_0767 - 11009682-11010251                                         30   1.3  
01_01_0702 + 5423059-5423571                                           30   1.3  
06_03_0473 + 21190878-21191188,21191269-21192355,21192972-211931...    29   2.2  
05_07_0150 - 28035518-28036390                                         29   2.2  
01_01_0302 + 2473556-2473890,2475454-2475517,2475927-2476118           29   2.9  
11_06_0741 - 26826931-26827022,26827660-26829470,26829772-26830610     29   3.8  
03_06_0120 + 31804301-31804412,31804525-31804631,31804714-318047...    29   3.8  
11_06_0085 - 19905784-19906510,19907428-19907557,19907739-19907874     28   5.1  
01_06_1297 - 36095727-36095776,36096285-36097467                       28   5.1  
07_03_0460 + 18425464-18427473                                         28   6.7  
02_05_0693 - 30977323-30977421,30977783-30977843,30978874-309789...    28   6.7  
01_01_0827 + 6443319-6446085,6446317-6446407,6446502-6448017,644...    28   6.7  
07_01_1039 - 9037689-9038225,9038831-9040627                           27   8.9  
06_03_0594 - 22600269-22600390,22600771-22600887,22600996-22601101     27   8.9  
05_05_0006 + 21450739-21451434                                         27   8.9  
01_06_1785 - 39859790-39860671                                         27   8.9  
01_01_0306 + 2499350-2499678,2500041-2500137                           27   8.9  

>12_01_0642 + 5414964-5415410,5415535-5416677
          Length = 529

 Score = 31.9 bits (69), Expect = 0.41
 Identities = 24/78 (30%), Positives = 37/78 (47%)
 Frame = +2

Query: 371 EAGVVLAATTAAPYVSAPLAVGDAKVAAAIDHLERRVPLVTEQPKVIVETTKQAVLSKIS 550
           EA  +L A   A   SAP A GDA  AA +  L      V ++ +   +T +  VL+ +S
Sbjct: 432 EAARILDARREALSRSAPAASGDAMCAALVAELRELSERVADE-REYAQTGRACVLAGMS 490

Query: 551 PHVNKVYGARAVAEQRVK 604
            H  +   +  + E RV+
Sbjct: 491 SHGQQRASSVQLGELRVR 508


>01_01_0012 + 71903-72935,73468-73981,74619-76008
          Length = 978

 Score = 31.5 bits (68), Expect = 0.54
 Identities = 24/78 (30%), Positives = 33/78 (42%)
 Frame = +2

Query: 173 VFFEDVNRVSEMATEVSSAPTTLPQLQSVQKAMAIPTVEAAVGQVGAIYSKVKGAHSLLE 352
           VFF   N  + + T  S+ P TLP + S    M   T+       GA+ +       LL 
Sbjct: 183 VFFSASNTAATVVT--STFPPTLPAVSSAYPNMVNQTMPNMPNYAGALSAAFPSLLGLLP 240

Query: 353 WALSTAEAGVVLAATTAA 406
            A + A  GVVL    A+
Sbjct: 241 AASTGASGGVVLPGVGAS 258


>03_06_0493 +
           34315867-34316124,34316194-34316256,34317346-34317604,
           34317710-34317819
          Length = 229

 Score = 31.1 bits (67), Expect = 0.72
 Identities = 16/29 (55%), Positives = 18/29 (62%)
 Frame = +3

Query: 372 KLE*FLLQPLPRRMCQLLSLSATPRLLQP 458
           K+  FLL PL R +CQLL   A  RLL P
Sbjct: 27  KVSAFLLTPLARTVCQLLPSHARSRLLCP 55


>02_01_0743 -
           5530184-5531078,5531160-5531405,5531815-5532450,
           5534499-5534607,5536157-5536321,5536446-5536543,
           5536648-5536898
          Length = 799

 Score = 30.7 bits (66), Expect = 0.95
 Identities = 19/65 (29%), Positives = 30/65 (46%)
 Frame = -1

Query: 408 GAAVVAARTTPASAVDRAHSRSEWAPLTFE*IAPTCPTAASTVGIAIAFCTDWSCGNVVG 229
           G +VVAA T  ++  D A  +   A  +    + +CP  A  VG+      DWS   +  
Sbjct: 547 GVSVVAAWTRASAPTDLAFDKRRVAFNSESGTSMSCPHVAGVVGLLRTLRPDWSPAAIRS 606

Query: 228 AELTS 214
           A +T+
Sbjct: 607 ALMTT 611


>06_02_0187 +
           12805788-12807007,12807059-12807186,12807811-12807859,
           12808508-12808853
          Length = 580

 Score = 28.3 bits (60), Expect(2) = 1.2
 Identities = 20/40 (50%), Positives = 22/40 (55%)
 Frame = -1

Query: 495 SVTSGTLRSR*SMAAATLASPTARGADTYGAAVVAARTTP 376
           S TSG   S  S AAAT ++ TA    T  AA VAA T P
Sbjct: 72  SPTSGIAVSFLSTAAATNSTDTATVPTTTAAARVAATTRP 111



 Score = 20.6 bits (41), Expect(2) = 1.2
 Identities = 8/24 (33%), Positives = 11/24 (45%)
 Frame = -1

Query: 402 AVVAARTTPASAVDRAHSRSEWAP 331
           AVV   + PA      + + EW P
Sbjct: 151 AVVGLASKPAHVFSNPYFKCEWLP 174


>03_02_0767 - 11009682-11010251
          Length = 189

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = +3

Query: 195 GSRKWRQK*AQLPQHCHSSNLCRRQW 272
           GSR WR+  AQ+P+   S   CR +W
Sbjct: 49  GSRHWRRMAAQMPRRRRSPAQCRDRW 74


>01_01_0702 + 5423059-5423571
          Length = 170

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 18/40 (45%), Positives = 21/40 (52%)
 Frame = -1

Query: 315 IAPTCPTAASTVGIAIAFCTDWSCGNVVGAELTSVAISET 196
           +A  C TAA   G+  AFC DW CG      L S A+ ET
Sbjct: 36  VAEEC-TAAYIGGVRAAFCGDWLCG------LCSEAVKET 68


>06_03_0473 +
           21190878-21191188,21191269-21192355,21192972-21193194,
           21193286-21193356,21193385-21193441,21193442-21194056,
           21194168-21194237,21194470-21194745,21194916-21195130,
           21195224-21195529,21195750-21195813,21195902-21196141,
           21196306-21196415
          Length = 1214

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
 Frame = +2

Query: 329 KGAHSLLEWALSTAEAGVVLAATTAAPYVSAPLAVGDAKVA-AAIDHLERRVPLVTEQPK 505
           K   ++L WA  T  + V+ AAT AA   SAPL  G    A AA+  +   V ++ E   
Sbjct: 307 KAYGAVLYWAAPTVVSAVMFAATAAAG--SAPLDAGTVFTALAALRAMSEPVRMLPEAMT 364

Query: 506 VIVE 517
           ++++
Sbjct: 365 MMIQ 368


>05_07_0150 - 28035518-28036390
          Length = 290

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 23/63 (36%), Positives = 31/63 (49%)
 Frame = +2

Query: 362 STAEAGVVLAATTAAPYVSAPLAVGDAKVAAAIDHLERRVPLVTEQPKVIVETTKQAVLS 541
           ST   G  +A TT A     PL+    ++AAA+ HL    PL++E   VI  T   A +S
Sbjct: 39  STPAKGKSVATTTTAVLSPPPLS-SPGELAAALSHLRTADPLLSE---VISSTGAPAFIS 94

Query: 542 KIS 550
             S
Sbjct: 95  SPS 97


>01_01_0302 + 2473556-2473890,2475454-2475517,2475927-2476118
          Length = 196

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 17/45 (37%), Positives = 25/45 (55%)
 Frame = +2

Query: 275 IPTVEAAVGQVGAIYSKVKGAHSLLEWALSTAEAGVVLAATTAAP 409
           +  ++ A G VGA  SK+  A +L  + L+TA   + LAAT   P
Sbjct: 4   VARLDQADGAVGAA-SKIAAARALGAFGLATASLAINLAATRGPP 47


>11_06_0741 - 26826931-26827022,26827660-26829470,26829772-26830610
          Length = 913

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = +1

Query: 193 PGLGNGDRSKLSSHNIATAPICAEGNGYPYR 285
           P  G G R  +++ N   A  C+ GNGY Y+
Sbjct: 301 PDNGTGSRIIVTTDNQQVANTCSHGNGYVYQ 331


>03_06_0120 +
           31804301-31804412,31804525-31804631,31804714-31804756,
           31806069-31806187
          Length = 126

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 21/57 (36%), Positives = 28/57 (49%)
 Frame = -1

Query: 456 AAATLASPTARGADTYGAAVVAARTTPASAVDRAHSRSEWAPLTFE*IAPTCPTAAS 286
           A + L S  AR   T  AA  A R   +SA D AH  ++W  +T+  I  TC   A+
Sbjct: 6   ARSGLRSLAARAKAT--AAPAARRRMSSSAHDDAHETAKWEKITYAGIV-TCTLLAA 59


>11_06_0085 - 19905784-19906510,19907428-19907557,19907739-19907874
          Length = 330

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 19/73 (26%), Positives = 31/73 (42%), Gaps = 3/73 (4%)
 Frame = +2

Query: 185 DVNRVSEMATEVSSAPTTLP---QLQSVQKAMAIPTVEAAVGQVGAIYSKVKGAHSLLEW 355
           ++  +  MAT  S+  TT+P   Q Q+  K     T  AA    G+ Y +      L E 
Sbjct: 175 NLESMQSMATAPSNEATTIPKLFQFQTWMKPSPATTSSAATAAAGSCYKQAMAMQELQEE 234

Query: 356 ALSTAEAGVVLAA 394
              +A A  + ++
Sbjct: 235 QEGSAAAAAMASS 247


>01_06_1297 - 36095727-36095776,36096285-36097467
          Length = 410

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 4/83 (4%)
 Frame = +2

Query: 227 APTTLPQLQSVQKAMA--IPTVEAAVGQVGAIYSKVKGAHSLL--EWALSTAEAGVVLAA 394
           +P+ L +L +  K +     T   A   +GA+   V G  +++    A     +  VL A
Sbjct: 107 SPSDLARLPASGKLVTTLFQTTGRAPSDLGAVNLTVGGNSTVVVRSPAPFPGSSATVLGA 166

Query: 395 TTAAPYVSAPLAVGDAKVAAAID 463
            TA PY  + LAVG   V + +D
Sbjct: 167 VTAVPYNLSVLAVGGLIVPSGLD 189


>07_03_0460 + 18425464-18427473
          Length = 669

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 21/91 (23%), Positives = 39/91 (42%), Gaps = 1/91 (1%)
 Frame = -1

Query: 405 AAVVAARTTPASAVDRAHSRSE-WAPLTFE*IAPTCPTAASTVGIAIAFCTDWSCGNVVG 229
           A +  +R TP  A+  + + +E W  +    IA         V   I +C D S G V+ 
Sbjct: 413 AYIGKSRGTPLMAIKMSTAVTEKWKDMLGNEIAVQSRIKHMNVAKLIGYCLDHSDGTVLI 472

Query: 228 AELTSVAISETRFTSSKKTIKILTFEFNKKL 136
            E  ++++ +  F  + K  +  T +   K+
Sbjct: 473 YEYGAISLYDVLFGDAGKIYRPFTCDLRLKI 503


>02_05_0693 -
           30977323-30977421,30977783-30977843,30978874-30978996,
           30979258-30979340,30979847-30979924,30980375-30980506,
           30980685-30980728,30980966-30981090,30981468-30981769,
           30981877-30981994,30982444-30982574,30983082-30983276,
           30983362-30983646
          Length = 591

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 30/88 (34%), Positives = 41/88 (46%)
 Frame = +2

Query: 200 SEMATEVSSAPTTLPQLQSVQKAMAIPTVEAAVGQVGAIYSKVKGAHSLLEWALSTAEAG 379
           +E A   +S+P   P LQ+ + A A P+   A+G      + V GA    E +  T  AG
Sbjct: 20  AEAAASTTSSP---PPLQN-RPAAASPS--HALGSRLGFLNGVPGAPGAREASAFTT-AG 72

Query: 380 VVLAATTAAPYVSAPLAVGDAKVAAAID 463
             LAA  AA   S P+A  DA     +D
Sbjct: 73  F-LAAGAAAALASLPVAYADANEVGVVD 99


>01_01_0827 + 6443319-6446085,6446317-6446407,6446502-6448017,
            6448164-6448243,6449045-6449129,6449221-6449312,
            6449388-6449456,6449544-6449580,6449662-6449744,
            6450427-6450873,6450978-6451014,6451101-6451158,
            6451243-6451382,6451610-6451675,6451794-6451908,
            6453261-6453299,6453482-6453543
          Length = 1927

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 16/44 (36%), Positives = 22/44 (50%)
 Frame = +1

Query: 475  QSATCHGTT*SHSGDYQTSCAIENIPSREQGVRSPRGRRATGQV 606
            +S+  HG   S S + Q    I+NI S+ Q + S      TGQV
Sbjct: 1146 ESSEYHGVPVSCSNNIQVLNGIQNIGSKHQPLHSSISYHQTGQV 1189


>07_01_1039 - 9037689-9038225,9038831-9040627
          Length = 777

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
 Frame = +2

Query: 383 VLAATTAAPYVSAPL--AVGDAKVAAAIDHLERRVPLVTEQPKVIVETTKQAVLSKISPH 556
           +LAA T A   SAPL  A+  AKV AA+      V L+T  PK++    ++++L   +  
Sbjct: 93  LLAAFTHAHPHSAPLLRALTAAKVLAAVASSAAAVSLLTFIPKLLRIKVRESLLRDKASR 152

Query: 557 VNKVYG 574
           +++  G
Sbjct: 153 LHRDLG 158


>06_03_0594 - 22600269-22600390,22600771-22600887,22600996-22601101
          Length = 114

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 21/66 (31%), Positives = 32/66 (48%)
 Frame = +2

Query: 359 LSTAEAGVVLAATTAAPYVSAPLAVGDAKVAAAIDHLERRVPLVTEQPKVIVETTKQAVL 538
           +S+  A   ++A   A   SAP AV      A    L    P++ E P + +E T +AV+
Sbjct: 5   ISSVVAATPVSAGGDAAAASAPPAVEPPAAPACQLKL---TPVLVEHPGLSIELTIRAVV 61

Query: 539 SKISPH 556
             ISP+
Sbjct: 62  RPISPN 67


>05_05_0006 + 21450739-21451434
          Length = 231

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 14/39 (35%), Positives = 18/39 (46%)
 Frame = -1

Query: 438 SPTARGADTYGAAVVAARTTPASAVDRAHSRSEWAPLTF 322
           S +A    T  AA  +  TT ASA     S+  W P T+
Sbjct: 70  SSSASTTTTAAAAFTSTSTTGASATTVDSSKESWGPATY 108


>01_06_1785 - 39859790-39860671
          Length = 293

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 19/37 (51%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
 Frame = +2

Query: 347 LEWALSTAEAGVVLAATTAAPYVSAPLAVGDA-KVAA 454
           LE A +TAE  VV+AA  A+  V+   AVG A +VAA
Sbjct: 181 LEVARATAEYAVVVAAVPASVVVAREEAVGRAVRVAA 217


>01_01_0306 + 2499350-2499678,2500041-2500137
          Length = 141

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 15/40 (37%), Positives = 21/40 (52%)
 Frame = +2

Query: 290 AAVGQVGAIYSKVKGAHSLLEWALSTAEAGVVLAATTAAP 409
           A + Q     SK+  A +L  + L+TA   + LAAT  AP
Sbjct: 5   ARLDQADGAASKIATARALGAFGLATASLAINLAATRGAP 44


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,621,784
Number of Sequences: 37544
Number of extensions: 288062
Number of successful extensions: 1007
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 972
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1007
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1466594128
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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