Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov11e08
(612 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_01_0642 + 5414964-5415410,5415535-5416677 32 0.41
01_01_0012 + 71903-72935,73468-73981,74619-76008 31 0.54
03_06_0493 + 34315867-34316124,34316194-34316256,34317346-343176... 31 0.72
02_01_0743 - 5530184-5531078,5531160-5531405,5531815-5532450,553... 31 0.95
06_02_0187 + 12805788-12807007,12807059-12807186,12807811-128078... 28 1.2
03_02_0767 - 11009682-11010251 30 1.3
01_01_0702 + 5423059-5423571 30 1.3
06_03_0473 + 21190878-21191188,21191269-21192355,21192972-211931... 29 2.2
05_07_0150 - 28035518-28036390 29 2.2
01_01_0302 + 2473556-2473890,2475454-2475517,2475927-2476118 29 2.9
11_06_0741 - 26826931-26827022,26827660-26829470,26829772-26830610 29 3.8
03_06_0120 + 31804301-31804412,31804525-31804631,31804714-318047... 29 3.8
11_06_0085 - 19905784-19906510,19907428-19907557,19907739-19907874 28 5.1
01_06_1297 - 36095727-36095776,36096285-36097467 28 5.1
07_03_0460 + 18425464-18427473 28 6.7
02_05_0693 - 30977323-30977421,30977783-30977843,30978874-309789... 28 6.7
01_01_0827 + 6443319-6446085,6446317-6446407,6446502-6448017,644... 28 6.7
07_01_1039 - 9037689-9038225,9038831-9040627 27 8.9
06_03_0594 - 22600269-22600390,22600771-22600887,22600996-22601101 27 8.9
05_05_0006 + 21450739-21451434 27 8.9
01_06_1785 - 39859790-39860671 27 8.9
01_01_0306 + 2499350-2499678,2500041-2500137 27 8.9
>12_01_0642 + 5414964-5415410,5415535-5416677
Length = 529
Score = 31.9 bits (69), Expect = 0.41
Identities = 24/78 (30%), Positives = 37/78 (47%)
Frame = +2
Query: 371 EAGVVLAATTAAPYVSAPLAVGDAKVAAAIDHLERRVPLVTEQPKVIVETTKQAVLSKIS 550
EA +L A A SAP A GDA AA + L V ++ + +T + VL+ +S
Sbjct: 432 EAARILDARREALSRSAPAASGDAMCAALVAELRELSERVADE-REYAQTGRACVLAGMS 490
Query: 551 PHVNKVYGARAVAEQRVK 604
H + + + E RV+
Sbjct: 491 SHGQQRASSVQLGELRVR 508
>01_01_0012 + 71903-72935,73468-73981,74619-76008
Length = 978
Score = 31.5 bits (68), Expect = 0.54
Identities = 24/78 (30%), Positives = 33/78 (42%)
Frame = +2
Query: 173 VFFEDVNRVSEMATEVSSAPTTLPQLQSVQKAMAIPTVEAAVGQVGAIYSKVKGAHSLLE 352
VFF N + + T S+ P TLP + S M T+ GA+ + LL
Sbjct: 183 VFFSASNTAATVVT--STFPPTLPAVSSAYPNMVNQTMPNMPNYAGALSAAFPSLLGLLP 240
Query: 353 WALSTAEAGVVLAATTAA 406
A + A GVVL A+
Sbjct: 241 AASTGASGGVVLPGVGAS 258
>03_06_0493 +
34315867-34316124,34316194-34316256,34317346-34317604,
34317710-34317819
Length = 229
Score = 31.1 bits (67), Expect = 0.72
Identities = 16/29 (55%), Positives = 18/29 (62%)
Frame = +3
Query: 372 KLE*FLLQPLPRRMCQLLSLSATPRLLQP 458
K+ FLL PL R +CQLL A RLL P
Sbjct: 27 KVSAFLLTPLARTVCQLLPSHARSRLLCP 55
>02_01_0743 -
5530184-5531078,5531160-5531405,5531815-5532450,
5534499-5534607,5536157-5536321,5536446-5536543,
5536648-5536898
Length = 799
Score = 30.7 bits (66), Expect = 0.95
Identities = 19/65 (29%), Positives = 30/65 (46%)
Frame = -1
Query: 408 GAAVVAARTTPASAVDRAHSRSEWAPLTFE*IAPTCPTAASTVGIAIAFCTDWSCGNVVG 229
G +VVAA T ++ D A + A + + +CP A VG+ DWS +
Sbjct: 547 GVSVVAAWTRASAPTDLAFDKRRVAFNSESGTSMSCPHVAGVVGLLRTLRPDWSPAAIRS 606
Query: 228 AELTS 214
A +T+
Sbjct: 607 ALMTT 611
>06_02_0187 +
12805788-12807007,12807059-12807186,12807811-12807859,
12808508-12808853
Length = 580
Score = 28.3 bits (60), Expect(2) = 1.2
Identities = 20/40 (50%), Positives = 22/40 (55%)
Frame = -1
Query: 495 SVTSGTLRSR*SMAAATLASPTARGADTYGAAVVAARTTP 376
S TSG S S AAAT ++ TA T AA VAA T P
Sbjct: 72 SPTSGIAVSFLSTAAATNSTDTATVPTTTAAARVAATTRP 111
Score = 20.6 bits (41), Expect(2) = 1.2
Identities = 8/24 (33%), Positives = 11/24 (45%)
Frame = -1
Query: 402 AVVAARTTPASAVDRAHSRSEWAP 331
AVV + PA + + EW P
Sbjct: 151 AVVGLASKPAHVFSNPYFKCEWLP 174
>03_02_0767 - 11009682-11010251
Length = 189
Score = 30.3 bits (65), Expect = 1.3
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +3
Query: 195 GSRKWRQK*AQLPQHCHSSNLCRRQW 272
GSR WR+ AQ+P+ S CR +W
Sbjct: 49 GSRHWRRMAAQMPRRRRSPAQCRDRW 74
>01_01_0702 + 5423059-5423571
Length = 170
Score = 30.3 bits (65), Expect = 1.3
Identities = 18/40 (45%), Positives = 21/40 (52%)
Frame = -1
Query: 315 IAPTCPTAASTVGIAIAFCTDWSCGNVVGAELTSVAISET 196
+A C TAA G+ AFC DW CG L S A+ ET
Sbjct: 36 VAEEC-TAAYIGGVRAAFCGDWLCG------LCSEAVKET 68
>06_03_0473 +
21190878-21191188,21191269-21192355,21192972-21193194,
21193286-21193356,21193385-21193441,21193442-21194056,
21194168-21194237,21194470-21194745,21194916-21195130,
21195224-21195529,21195750-21195813,21195902-21196141,
21196306-21196415
Length = 1214
Score = 29.5 bits (63), Expect = 2.2
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = +2
Query: 329 KGAHSLLEWALSTAEAGVVLAATTAAPYVSAPLAVGDAKVA-AAIDHLERRVPLVTEQPK 505
K ++L WA T + V+ AAT AA SAPL G A AA+ + V ++ E
Sbjct: 307 KAYGAVLYWAAPTVVSAVMFAATAAAG--SAPLDAGTVFTALAALRAMSEPVRMLPEAMT 364
Query: 506 VIVE 517
++++
Sbjct: 365 MMIQ 368
>05_07_0150 - 28035518-28036390
Length = 290
Score = 29.5 bits (63), Expect = 2.2
Identities = 23/63 (36%), Positives = 31/63 (49%)
Frame = +2
Query: 362 STAEAGVVLAATTAAPYVSAPLAVGDAKVAAAIDHLERRVPLVTEQPKVIVETTKQAVLS 541
ST G +A TT A PL+ ++AAA+ HL PL++E VI T A +S
Sbjct: 39 STPAKGKSVATTTTAVLSPPPLS-SPGELAAALSHLRTADPLLSE---VISSTGAPAFIS 94
Query: 542 KIS 550
S
Sbjct: 95 SPS 97
>01_01_0302 + 2473556-2473890,2475454-2475517,2475927-2476118
Length = 196
Score = 29.1 bits (62), Expect = 2.9
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +2
Query: 275 IPTVEAAVGQVGAIYSKVKGAHSLLEWALSTAEAGVVLAATTAAP 409
+ ++ A G VGA SK+ A +L + L+TA + LAAT P
Sbjct: 4 VARLDQADGAVGAA-SKIAAARALGAFGLATASLAINLAATRGPP 47
>11_06_0741 - 26826931-26827022,26827660-26829470,26829772-26830610
Length = 913
Score = 28.7 bits (61), Expect = 3.8
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +1
Query: 193 PGLGNGDRSKLSSHNIATAPICAEGNGYPYR 285
P G G R +++ N A C+ GNGY Y+
Sbjct: 301 PDNGTGSRIIVTTDNQQVANTCSHGNGYVYQ 331
>03_06_0120 +
31804301-31804412,31804525-31804631,31804714-31804756,
31806069-31806187
Length = 126
Score = 28.7 bits (61), Expect = 3.8
Identities = 21/57 (36%), Positives = 28/57 (49%)
Frame = -1
Query: 456 AAATLASPTARGADTYGAAVVAARTTPASAVDRAHSRSEWAPLTFE*IAPTCPTAAS 286
A + L S AR T AA A R +SA D AH ++W +T+ I TC A+
Sbjct: 6 ARSGLRSLAARAKAT--AAPAARRRMSSSAHDDAHETAKWEKITYAGIV-TCTLLAA 59
>11_06_0085 - 19905784-19906510,19907428-19907557,19907739-19907874
Length = 330
Score = 28.3 bits (60), Expect = 5.1
Identities = 19/73 (26%), Positives = 31/73 (42%), Gaps = 3/73 (4%)
Frame = +2
Query: 185 DVNRVSEMATEVSSAPTTLP---QLQSVQKAMAIPTVEAAVGQVGAIYSKVKGAHSLLEW 355
++ + MAT S+ TT+P Q Q+ K T AA G+ Y + L E
Sbjct: 175 NLESMQSMATAPSNEATTIPKLFQFQTWMKPSPATTSSAATAAAGSCYKQAMAMQELQEE 234
Query: 356 ALSTAEAGVVLAA 394
+A A + ++
Sbjct: 235 QEGSAAAAAMASS 247
>01_06_1297 - 36095727-36095776,36096285-36097467
Length = 410
Score = 28.3 bits (60), Expect = 5.1
Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 4/83 (4%)
Frame = +2
Query: 227 APTTLPQLQSVQKAMA--IPTVEAAVGQVGAIYSKVKGAHSLL--EWALSTAEAGVVLAA 394
+P+ L +L + K + T A +GA+ V G +++ A + VL A
Sbjct: 107 SPSDLARLPASGKLVTTLFQTTGRAPSDLGAVNLTVGGNSTVVVRSPAPFPGSSATVLGA 166
Query: 395 TTAAPYVSAPLAVGDAKVAAAID 463
TA PY + LAVG V + +D
Sbjct: 167 VTAVPYNLSVLAVGGLIVPSGLD 189
>07_03_0460 + 18425464-18427473
Length = 669
Score = 27.9 bits (59), Expect = 6.7
Identities = 21/91 (23%), Positives = 39/91 (42%), Gaps = 1/91 (1%)
Frame = -1
Query: 405 AAVVAARTTPASAVDRAHSRSE-WAPLTFE*IAPTCPTAASTVGIAIAFCTDWSCGNVVG 229
A + +R TP A+ + + +E W + IA V I +C D S G V+
Sbjct: 413 AYIGKSRGTPLMAIKMSTAVTEKWKDMLGNEIAVQSRIKHMNVAKLIGYCLDHSDGTVLI 472
Query: 228 AELTSVAISETRFTSSKKTIKILTFEFNKKL 136
E ++++ + F + K + T + K+
Sbjct: 473 YEYGAISLYDVLFGDAGKIYRPFTCDLRLKI 503
>02_05_0693 -
30977323-30977421,30977783-30977843,30978874-30978996,
30979258-30979340,30979847-30979924,30980375-30980506,
30980685-30980728,30980966-30981090,30981468-30981769,
30981877-30981994,30982444-30982574,30983082-30983276,
30983362-30983646
Length = 591
Score = 27.9 bits (59), Expect = 6.7
Identities = 30/88 (34%), Positives = 41/88 (46%)
Frame = +2
Query: 200 SEMATEVSSAPTTLPQLQSVQKAMAIPTVEAAVGQVGAIYSKVKGAHSLLEWALSTAEAG 379
+E A +S+P P LQ+ + A A P+ A+G + V GA E + T AG
Sbjct: 20 AEAAASTTSSP---PPLQN-RPAAASPS--HALGSRLGFLNGVPGAPGAREASAFTT-AG 72
Query: 380 VVLAATTAAPYVSAPLAVGDAKVAAAID 463
LAA AA S P+A DA +D
Sbjct: 73 F-LAAGAAAALASLPVAYADANEVGVVD 99
>01_01_0827 + 6443319-6446085,6446317-6446407,6446502-6448017,
6448164-6448243,6449045-6449129,6449221-6449312,
6449388-6449456,6449544-6449580,6449662-6449744,
6450427-6450873,6450978-6451014,6451101-6451158,
6451243-6451382,6451610-6451675,6451794-6451908,
6453261-6453299,6453482-6453543
Length = 1927
Score = 27.9 bits (59), Expect = 6.7
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = +1
Query: 475 QSATCHGTT*SHSGDYQTSCAIENIPSREQGVRSPRGRRATGQV 606
+S+ HG S S + Q I+NI S+ Q + S TGQV
Sbjct: 1146 ESSEYHGVPVSCSNNIQVLNGIQNIGSKHQPLHSSISYHQTGQV 1189
>07_01_1039 - 9037689-9038225,9038831-9040627
Length = 777
Score = 27.5 bits (58), Expect = 8.9
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Frame = +2
Query: 383 VLAATTAAPYVSAPL--AVGDAKVAAAIDHLERRVPLVTEQPKVIVETTKQAVLSKISPH 556
+LAA T A SAPL A+ AKV AA+ V L+T PK++ ++++L +
Sbjct: 93 LLAAFTHAHPHSAPLLRALTAAKVLAAVASSAAAVSLLTFIPKLLRIKVRESLLRDKASR 152
Query: 557 VNKVYG 574
+++ G
Sbjct: 153 LHRDLG 158
>06_03_0594 - 22600269-22600390,22600771-22600887,22600996-22601101
Length = 114
Score = 27.5 bits (58), Expect = 8.9
Identities = 21/66 (31%), Positives = 32/66 (48%)
Frame = +2
Query: 359 LSTAEAGVVLAATTAAPYVSAPLAVGDAKVAAAIDHLERRVPLVTEQPKVIVETTKQAVL 538
+S+ A ++A A SAP AV A L P++ E P + +E T +AV+
Sbjct: 5 ISSVVAATPVSAGGDAAAASAPPAVEPPAAPACQLKL---TPVLVEHPGLSIELTIRAVV 61
Query: 539 SKISPH 556
ISP+
Sbjct: 62 RPISPN 67
>05_05_0006 + 21450739-21451434
Length = 231
Score = 27.5 bits (58), Expect = 8.9
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = -1
Query: 438 SPTARGADTYGAAVVAARTTPASAVDRAHSRSEWAPLTF 322
S +A T AA + TT ASA S+ W P T+
Sbjct: 70 SSSASTTTTAAAAFTSTSTTGASATTVDSSKESWGPATY 108
>01_06_1785 - 39859790-39860671
Length = 293
Score = 27.5 bits (58), Expect = 8.9
Identities = 19/37 (51%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Frame = +2
Query: 347 LEWALSTAEAGVVLAATTAAPYVSAPLAVGDA-KVAA 454
LE A +TAE VV+AA A+ V+ AVG A +VAA
Sbjct: 181 LEVARATAEYAVVVAAVPASVVVAREEAVGRAVRVAA 217
>01_01_0306 + 2499350-2499678,2500041-2500137
Length = 141
Score = 27.5 bits (58), Expect = 8.9
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +2
Query: 290 AAVGQVGAIYSKVKGAHSLLEWALSTAEAGVVLAATTAAP 409
A + Q SK+ A +L + L+TA + LAAT AP
Sbjct: 5 ARLDQADGAASKIATARALGAFGLATASLAINLAATRGAP 44
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,621,784
Number of Sequences: 37544
Number of extensions: 288062
Number of successful extensions: 1007
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 972
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1007
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1466594128
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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