BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bmov11e08 (612 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 12_01_0642 + 5414964-5415410,5415535-5416677 32 0.41 01_01_0012 + 71903-72935,73468-73981,74619-76008 31 0.54 03_06_0493 + 34315867-34316124,34316194-34316256,34317346-343176... 31 0.72 02_01_0743 - 5530184-5531078,5531160-5531405,5531815-5532450,553... 31 0.95 06_02_0187 + 12805788-12807007,12807059-12807186,12807811-128078... 28 1.2 03_02_0767 - 11009682-11010251 30 1.3 01_01_0702 + 5423059-5423571 30 1.3 06_03_0473 + 21190878-21191188,21191269-21192355,21192972-211931... 29 2.2 05_07_0150 - 28035518-28036390 29 2.2 01_01_0302 + 2473556-2473890,2475454-2475517,2475927-2476118 29 2.9 11_06_0741 - 26826931-26827022,26827660-26829470,26829772-26830610 29 3.8 03_06_0120 + 31804301-31804412,31804525-31804631,31804714-318047... 29 3.8 11_06_0085 - 19905784-19906510,19907428-19907557,19907739-19907874 28 5.1 01_06_1297 - 36095727-36095776,36096285-36097467 28 5.1 07_03_0460 + 18425464-18427473 28 6.7 02_05_0693 - 30977323-30977421,30977783-30977843,30978874-309789... 28 6.7 01_01_0827 + 6443319-6446085,6446317-6446407,6446502-6448017,644... 28 6.7 07_01_1039 - 9037689-9038225,9038831-9040627 27 8.9 06_03_0594 - 22600269-22600390,22600771-22600887,22600996-22601101 27 8.9 05_05_0006 + 21450739-21451434 27 8.9 01_06_1785 - 39859790-39860671 27 8.9 01_01_0306 + 2499350-2499678,2500041-2500137 27 8.9 >12_01_0642 + 5414964-5415410,5415535-5416677 Length = 529 Score = 31.9 bits (69), Expect = 0.41 Identities = 24/78 (30%), Positives = 37/78 (47%) Frame = +2 Query: 371 EAGVVLAATTAAPYVSAPLAVGDAKVAAAIDHLERRVPLVTEQPKVIVETTKQAVLSKIS 550 EA +L A A SAP A GDA AA + L V ++ + +T + VL+ +S Sbjct: 432 EAARILDARREALSRSAPAASGDAMCAALVAELRELSERVADE-REYAQTGRACVLAGMS 490 Query: 551 PHVNKVYGARAVAEQRVK 604 H + + + E RV+ Sbjct: 491 SHGQQRASSVQLGELRVR 508 >01_01_0012 + 71903-72935,73468-73981,74619-76008 Length = 978 Score = 31.5 bits (68), Expect = 0.54 Identities = 24/78 (30%), Positives = 33/78 (42%) Frame = +2 Query: 173 VFFEDVNRVSEMATEVSSAPTTLPQLQSVQKAMAIPTVEAAVGQVGAIYSKVKGAHSLLE 352 VFF N + + T S+ P TLP + S M T+ GA+ + LL Sbjct: 183 VFFSASNTAATVVT--STFPPTLPAVSSAYPNMVNQTMPNMPNYAGALSAAFPSLLGLLP 240 Query: 353 WALSTAEAGVVLAATTAA 406 A + A GVVL A+ Sbjct: 241 AASTGASGGVVLPGVGAS 258 >03_06_0493 + 34315867-34316124,34316194-34316256,34317346-34317604, 34317710-34317819 Length = 229 Score = 31.1 bits (67), Expect = 0.72 Identities = 16/29 (55%), Positives = 18/29 (62%) Frame = +3 Query: 372 KLE*FLLQPLPRRMCQLLSLSATPRLLQP 458 K+ FLL PL R +CQLL A RLL P Sbjct: 27 KVSAFLLTPLARTVCQLLPSHARSRLLCP 55 >02_01_0743 - 5530184-5531078,5531160-5531405,5531815-5532450, 5534499-5534607,5536157-5536321,5536446-5536543, 5536648-5536898 Length = 799 Score = 30.7 bits (66), Expect = 0.95 Identities = 19/65 (29%), Positives = 30/65 (46%) Frame = -1 Query: 408 GAAVVAARTTPASAVDRAHSRSEWAPLTFE*IAPTCPTAASTVGIAIAFCTDWSCGNVVG 229 G +VVAA T ++ D A + A + + +CP A VG+ DWS + Sbjct: 547 GVSVVAAWTRASAPTDLAFDKRRVAFNSESGTSMSCPHVAGVVGLLRTLRPDWSPAAIRS 606 Query: 228 AELTS 214 A +T+ Sbjct: 607 ALMTT 611 >06_02_0187 + 12805788-12807007,12807059-12807186,12807811-12807859, 12808508-12808853 Length = 580 Score = 28.3 bits (60), Expect(2) = 1.2 Identities = 20/40 (50%), Positives = 22/40 (55%) Frame = -1 Query: 495 SVTSGTLRSR*SMAAATLASPTARGADTYGAAVVAARTTP 376 S TSG S S AAAT ++ TA T AA VAA T P Sbjct: 72 SPTSGIAVSFLSTAAATNSTDTATVPTTTAAARVAATTRP 111 Score = 20.6 bits (41), Expect(2) = 1.2 Identities = 8/24 (33%), Positives = 11/24 (45%) Frame = -1 Query: 402 AVVAARTTPASAVDRAHSRSEWAP 331 AVV + PA + + EW P Sbjct: 151 AVVGLASKPAHVFSNPYFKCEWLP 174 >03_02_0767 - 11009682-11010251 Length = 189 Score = 30.3 bits (65), Expect = 1.3 Identities = 12/26 (46%), Positives = 16/26 (61%) Frame = +3 Query: 195 GSRKWRQK*AQLPQHCHSSNLCRRQW 272 GSR WR+ AQ+P+ S CR +W Sbjct: 49 GSRHWRRMAAQMPRRRRSPAQCRDRW 74 >01_01_0702 + 5423059-5423571 Length = 170 Score = 30.3 bits (65), Expect = 1.3 Identities = 18/40 (45%), Positives = 21/40 (52%) Frame = -1 Query: 315 IAPTCPTAASTVGIAIAFCTDWSCGNVVGAELTSVAISET 196 +A C TAA G+ AFC DW CG L S A+ ET Sbjct: 36 VAEEC-TAAYIGGVRAAFCGDWLCG------LCSEAVKET 68 >06_03_0473 + 21190878-21191188,21191269-21192355,21192972-21193194, 21193286-21193356,21193385-21193441,21193442-21194056, 21194168-21194237,21194470-21194745,21194916-21195130, 21195224-21195529,21195750-21195813,21195902-21196141, 21196306-21196415 Length = 1214 Score = 29.5 bits (63), Expect = 2.2 Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 1/64 (1%) Frame = +2 Query: 329 KGAHSLLEWALSTAEAGVVLAATTAAPYVSAPLAVGDAKVA-AAIDHLERRVPLVTEQPK 505 K ++L WA T + V+ AAT AA SAPL G A AA+ + V ++ E Sbjct: 307 KAYGAVLYWAAPTVVSAVMFAATAAAG--SAPLDAGTVFTALAALRAMSEPVRMLPEAMT 364 Query: 506 VIVE 517 ++++ Sbjct: 365 MMIQ 368 >05_07_0150 - 28035518-28036390 Length = 290 Score = 29.5 bits (63), Expect = 2.2 Identities = 23/63 (36%), Positives = 31/63 (49%) Frame = +2 Query: 362 STAEAGVVLAATTAAPYVSAPLAVGDAKVAAAIDHLERRVPLVTEQPKVIVETTKQAVLS 541 ST G +A TT A PL+ ++AAA+ HL PL++E VI T A +S Sbjct: 39 STPAKGKSVATTTTAVLSPPPLS-SPGELAAALSHLRTADPLLSE---VISSTGAPAFIS 94 Query: 542 KIS 550 S Sbjct: 95 SPS 97 >01_01_0302 + 2473556-2473890,2475454-2475517,2475927-2476118 Length = 196 Score = 29.1 bits (62), Expect = 2.9 Identities = 17/45 (37%), Positives = 25/45 (55%) Frame = +2 Query: 275 IPTVEAAVGQVGAIYSKVKGAHSLLEWALSTAEAGVVLAATTAAP 409 + ++ A G VGA SK+ A +L + L+TA + LAAT P Sbjct: 4 VARLDQADGAVGAA-SKIAAARALGAFGLATASLAINLAATRGPP 47 >11_06_0741 - 26826931-26827022,26827660-26829470,26829772-26830610 Length = 913 Score = 28.7 bits (61), Expect = 3.8 Identities = 12/31 (38%), Positives = 17/31 (54%) Frame = +1 Query: 193 PGLGNGDRSKLSSHNIATAPICAEGNGYPYR 285 P G G R +++ N A C+ GNGY Y+ Sbjct: 301 PDNGTGSRIIVTTDNQQVANTCSHGNGYVYQ 331 >03_06_0120 + 31804301-31804412,31804525-31804631,31804714-31804756, 31806069-31806187 Length = 126 Score = 28.7 bits (61), Expect = 3.8 Identities = 21/57 (36%), Positives = 28/57 (49%) Frame = -1 Query: 456 AAATLASPTARGADTYGAAVVAARTTPASAVDRAHSRSEWAPLTFE*IAPTCPTAAS 286 A + L S AR T AA A R +SA D AH ++W +T+ I TC A+ Sbjct: 6 ARSGLRSLAARAKAT--AAPAARRRMSSSAHDDAHETAKWEKITYAGIV-TCTLLAA 59 >11_06_0085 - 19905784-19906510,19907428-19907557,19907739-19907874 Length = 330 Score = 28.3 bits (60), Expect = 5.1 Identities = 19/73 (26%), Positives = 31/73 (42%), Gaps = 3/73 (4%) Frame = +2 Query: 185 DVNRVSEMATEVSSAPTTLP---QLQSVQKAMAIPTVEAAVGQVGAIYSKVKGAHSLLEW 355 ++ + MAT S+ TT+P Q Q+ K T AA G+ Y + L E Sbjct: 175 NLESMQSMATAPSNEATTIPKLFQFQTWMKPSPATTSSAATAAAGSCYKQAMAMQELQEE 234 Query: 356 ALSTAEAGVVLAA 394 +A A + ++ Sbjct: 235 QEGSAAAAAMASS 247 >01_06_1297 - 36095727-36095776,36096285-36097467 Length = 410 Score = 28.3 bits (60), Expect = 5.1 Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 4/83 (4%) Frame = +2 Query: 227 APTTLPQLQSVQKAMA--IPTVEAAVGQVGAIYSKVKGAHSLL--EWALSTAEAGVVLAA 394 +P+ L +L + K + T A +GA+ V G +++ A + VL A Sbjct: 107 SPSDLARLPASGKLVTTLFQTTGRAPSDLGAVNLTVGGNSTVVVRSPAPFPGSSATVLGA 166 Query: 395 TTAAPYVSAPLAVGDAKVAAAID 463 TA PY + LAVG V + +D Sbjct: 167 VTAVPYNLSVLAVGGLIVPSGLD 189 >07_03_0460 + 18425464-18427473 Length = 669 Score = 27.9 bits (59), Expect = 6.7 Identities = 21/91 (23%), Positives = 39/91 (42%), Gaps = 1/91 (1%) Frame = -1 Query: 405 AAVVAARTTPASAVDRAHSRSE-WAPLTFE*IAPTCPTAASTVGIAIAFCTDWSCGNVVG 229 A + +R TP A+ + + +E W + IA V I +C D S G V+ Sbjct: 413 AYIGKSRGTPLMAIKMSTAVTEKWKDMLGNEIAVQSRIKHMNVAKLIGYCLDHSDGTVLI 472 Query: 228 AELTSVAISETRFTSSKKTIKILTFEFNKKL 136 E ++++ + F + K + T + K+ Sbjct: 473 YEYGAISLYDVLFGDAGKIYRPFTCDLRLKI 503 >02_05_0693 - 30977323-30977421,30977783-30977843,30978874-30978996, 30979258-30979340,30979847-30979924,30980375-30980506, 30980685-30980728,30980966-30981090,30981468-30981769, 30981877-30981994,30982444-30982574,30983082-30983276, 30983362-30983646 Length = 591 Score = 27.9 bits (59), Expect = 6.7 Identities = 30/88 (34%), Positives = 41/88 (46%) Frame = +2 Query: 200 SEMATEVSSAPTTLPQLQSVQKAMAIPTVEAAVGQVGAIYSKVKGAHSLLEWALSTAEAG 379 +E A +S+P P LQ+ + A A P+ A+G + V GA E + T AG Sbjct: 20 AEAAASTTSSP---PPLQN-RPAAASPS--HALGSRLGFLNGVPGAPGAREASAFTT-AG 72 Query: 380 VVLAATTAAPYVSAPLAVGDAKVAAAID 463 LAA AA S P+A DA +D Sbjct: 73 F-LAAGAAAALASLPVAYADANEVGVVD 99 >01_01_0827 + 6443319-6446085,6446317-6446407,6446502-6448017, 6448164-6448243,6449045-6449129,6449221-6449312, 6449388-6449456,6449544-6449580,6449662-6449744, 6450427-6450873,6450978-6451014,6451101-6451158, 6451243-6451382,6451610-6451675,6451794-6451908, 6453261-6453299,6453482-6453543 Length = 1927 Score = 27.9 bits (59), Expect = 6.7 Identities = 16/44 (36%), Positives = 22/44 (50%) Frame = +1 Query: 475 QSATCHGTT*SHSGDYQTSCAIENIPSREQGVRSPRGRRATGQV 606 +S+ HG S S + Q I+NI S+ Q + S TGQV Sbjct: 1146 ESSEYHGVPVSCSNNIQVLNGIQNIGSKHQPLHSSISYHQTGQV 1189 >07_01_1039 - 9037689-9038225,9038831-9040627 Length = 777 Score = 27.5 bits (58), Expect = 8.9 Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 2/66 (3%) Frame = +2 Query: 383 VLAATTAAPYVSAPL--AVGDAKVAAAIDHLERRVPLVTEQPKVIVETTKQAVLSKISPH 556 +LAA T A SAPL A+ AKV AA+ V L+T PK++ ++++L + Sbjct: 93 LLAAFTHAHPHSAPLLRALTAAKVLAAVASSAAAVSLLTFIPKLLRIKVRESLLRDKASR 152 Query: 557 VNKVYG 574 +++ G Sbjct: 153 LHRDLG 158 >06_03_0594 - 22600269-22600390,22600771-22600887,22600996-22601101 Length = 114 Score = 27.5 bits (58), Expect = 8.9 Identities = 21/66 (31%), Positives = 32/66 (48%) Frame = +2 Query: 359 LSTAEAGVVLAATTAAPYVSAPLAVGDAKVAAAIDHLERRVPLVTEQPKVIVETTKQAVL 538 +S+ A ++A A SAP AV A L P++ E P + +E T +AV+ Sbjct: 5 ISSVVAATPVSAGGDAAAASAPPAVEPPAAPACQLKL---TPVLVEHPGLSIELTIRAVV 61 Query: 539 SKISPH 556 ISP+ Sbjct: 62 RPISPN 67 >05_05_0006 + 21450739-21451434 Length = 231 Score = 27.5 bits (58), Expect = 8.9 Identities = 14/39 (35%), Positives = 18/39 (46%) Frame = -1 Query: 438 SPTARGADTYGAAVVAARTTPASAVDRAHSRSEWAPLTF 322 S +A T AA + TT ASA S+ W P T+ Sbjct: 70 SSSASTTTTAAAAFTSTSTTGASATTVDSSKESWGPATY 108 >01_06_1785 - 39859790-39860671 Length = 293 Score = 27.5 bits (58), Expect = 8.9 Identities = 19/37 (51%), Positives = 24/37 (64%), Gaps = 1/37 (2%) Frame = +2 Query: 347 LEWALSTAEAGVVLAATTAAPYVSAPLAVGDA-KVAA 454 LE A +TAE VV+AA A+ V+ AVG A +VAA Sbjct: 181 LEVARATAEYAVVVAAVPASVVVAREEAVGRAVRVAA 217 >01_01_0306 + 2499350-2499678,2500041-2500137 Length = 141 Score = 27.5 bits (58), Expect = 8.9 Identities = 15/40 (37%), Positives = 21/40 (52%) Frame = +2 Query: 290 AAVGQVGAIYSKVKGAHSLLEWALSTAEAGVVLAATTAAP 409 A + Q SK+ A +L + L+TA + LAAT AP Sbjct: 5 ARLDQADGAASKIATARALGAFGLATASLAINLAATRGAP 44 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 14,621,784 Number of Sequences: 37544 Number of extensions: 288062 Number of successful extensions: 1007 Number of sequences better than 10.0: 22 Number of HSP's better than 10.0 without gapping: 972 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1007 length of database: 14,793,348 effective HSP length: 79 effective length of database: 11,827,372 effective search space used: 1466594128 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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