Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11e05
         (581 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       28   0.066
X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    23   1.4  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    23   1.4  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    23   1.4  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   1.4  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   1.4  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    21   7.6  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    21   7.6  

>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 27.9 bits (59), Expect = 0.066
 Identities = 15/42 (35%), Positives = 25/42 (59%)
 Frame = -1

Query: 554 AKRVVLEYSSMVRP*CLLSSVSHAVRFI*YHYFMSTRWQSNL 429
           AKR++ ++S  ++P C+LS   H  +FI      S  WQ++L
Sbjct: 244 AKRLIEDFSGYIKPKCVLS--DHGTQFI------SNTWQNSL 277


>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = +3

Query: 147 STNLPWIEKYRPQTF 191
           S+N PW E+Y+P ++
Sbjct: 69  SSNRPWWERYQPVSY 83


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = +3

Query: 147 STNLPWIEKYRPQTF 191
           S+N PW E+Y+P ++
Sbjct: 70  SSNRPWWERYQPVSY 84


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = +3

Query: 147 STNLPWIEKYRPQTF 191
           S+N PW E+Y+P ++
Sbjct: 70  SSNRPWWERYQPVSY 84


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = +3

Query: 369  ASNDRGIDVVRNKIKMFAQQKVTLPPGR 452
            +SN+  I   R K   + QQ++++ P R
Sbjct: 1405 SSNNPSISAFRKKSLAYVQQRMSIAPNR 1432


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = +3

Query: 369  ASNDRGIDVVRNKIKMFAQQKVTLPPGR 452
            +SN+  I   R K   + QQ++++ P R
Sbjct: 1405 SSNNPSISAFRKKSLAYVQQRMSIAPNR 1432


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 4/7 (57%), Positives = 7/7 (100%)
 Frame = +2

Query: 284 WCWKNDD 304
           WCW+N++
Sbjct: 582 WCWQNEE 588


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -1

Query: 194 VESLWPVFLYPW 159
           V S WP+FL  W
Sbjct: 112 VASRWPLFLNEW 123


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,724
Number of Sequences: 336
Number of extensions: 2225
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14517299
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)