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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11e05
         (581 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_48733| Best HMM Match : RVT_1 (HMM E-Value=5.2e-05)                154   6e-38
SB_26897| Best HMM Match : AAA (HMM E-Value=4.2e-12)                   87   7e-18
SB_10418| Best HMM Match : No HMM Matches (HMM E-Value=.)              48   4e-06
SB_59437| Best HMM Match : AAA (HMM E-Value=7.4e-08)                   34   0.097
SB_19368| Best HMM Match : DEAD (HMM E-Value=4)                        34   0.097
SB_47632| Best HMM Match : AAA_5 (HMM E-Value=0.00038)                 33   0.17 
SB_18015| Best HMM Match : NACHT (HMM E-Value=5)                       32   0.30 
SB_42068| Best HMM Match : No HMM Matches (HMM E-Value=.)              32   0.39 
SB_58373| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   0.69 
SB_19447| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   0.69 
SB_5068| Best HMM Match : DED (HMM E-Value=1.5e-17)                    31   0.69 
SB_2807| Best HMM Match : No HMM Matches (HMM E-Value=.)               31   0.69 
SB_10311| Best HMM Match : S-antigen (HMM E-Value=0.73)                31   0.91 
SB_25516| Best HMM Match : AAA_2 (HMM E-Value=0)                       30   1.2  
SB_33907| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   2.1  
SB_30760| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   2.1  
SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0)                   29   2.1  
SB_8110| Best HMM Match : AAA (HMM E-Value=0.0032)                     29   2.8  
SB_16952| Best HMM Match : AAA_5 (HMM E-Value=0.47)                    29   2.8  
SB_14841| Best HMM Match : RVT_1 (HMM E-Value=0)                       29   2.8  
SB_48632| Best HMM Match : DUF265 (HMM E-Value=7.6e-22)                29   3.7  
SB_47951| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.7  
SB_35763| Best HMM Match : DUF651 (HMM E-Value=0.26)                   28   6.4  
SB_10268| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   6.4  
SB_7372| Best HMM Match : Rad17 (HMM E-Value=2.7e-09)                  24   7.4  
SB_54958| Best HMM Match : NUDE_C (HMM E-Value=9.8)                    27   8.5  
SB_41548| Best HMM Match : ResIII (HMM E-Value=0.27)                   27   8.5  
SB_22546| Best HMM Match : ABC_tran (HMM E-Value=0)                    27   8.5  
SB_19460| Best HMM Match : AAA (HMM E-Value=0)                         27   8.5  
SB_47323| Best HMM Match : 7tm_1 (HMM E-Value=7.6e-09)                 27   8.5  
SB_43853| Best HMM Match : AAA_5 (HMM E-Value=0)                       27   8.5  
SB_33727| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   8.5  

>SB_48733| Best HMM Match : RVT_1 (HMM E-Value=5.2e-05)
          Length = 1104

 Score =  154 bits (373), Expect = 6e-38
 Identities = 80/108 (74%), Positives = 86/108 (79%)
 Frame = +3

Query: 165  IEKYRPQTFDDIVGNEDTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTILCLARALLGVSF 344
            +EKYRP    +IVGNE+TVSRL               GPPG GKTT+ILCLARALLGVS 
Sbjct: 848  VEKYRPTKLHEIVGNEETVSRLE--------------GPPGTGKTTSILCLARALLGVSL 893

Query: 345  KDAVLELNASNDRGIDVVRNKIKMFAQQKVTLPPGRHKIVILDEADSM 488
            KDAVLELNASNDRGIDVVRNKIKMFAQQKVTLP GRHKI+ILDEADS+
Sbjct: 894  KDAVLELNASNDRGIDVVRNKIKMFAQQKVTLPKGRHKIIILDEADSL 941


>SB_26897| Best HMM Match : AAA (HMM E-Value=4.2e-12)
          Length = 230

 Score = 87.4 bits (207), Expect = 7e-18
 Identities = 49/108 (45%), Positives = 62/108 (57%), Gaps = 1/108 (0%)
 Frame = +3

Query: 237 FAKTGNAPNIIIAGPPGVGKTTTILCLARALL-GVSFKDAVLELNASNDRGIDVVRNKIK 413
           F      P+++  GPPG GKT+TIL +A+ L     F   VLELNAS+DRGI +VR  I 
Sbjct: 4   FINEERLPHLLFYGPPGTGKTSTILAVAKQLYPDKQFGSMVLELNASDDRGIGIVRGDIL 63

Query: 414 MFAQQKVTLPPGRHKIVILDEADSMTDGAQQALRTHHGAVFQYNSFCI 557
            FA  +     G  K+VILDEAD+MT  AQ ALR       +   FC+
Sbjct: 64  SFASTRTIFKSG-FKLVILDEADAMTQDAQNALRRVMEKFTENTRFCL 110


>SB_10418| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 477

 Score = 48.4 bits (110), Expect = 4e-06
 Identities = 28/73 (38%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
 Frame = +3

Query: 267 IIAGPPGVGKTTTILCLARALLGVSFKDAVLELNASNDRGIDVVRNKIKMFAQQKVTLPP 446
           ++ GPPG+GKTT    +A+   G +    V+E+NAS+DR ++V R KI++  Q K  L  
Sbjct: 384 LLCGPPGLGKTTLAHVIAQHA-GYN----VVEMNASDDRAVEVFRQKIEVATQMKSVLGA 438

Query: 447 G-RHKIVILDEAD 482
             R   +++DE D
Sbjct: 439 NERPNCLVIDEID 451



 Score = 28.3 bits (60), Expect = 4.8
 Identities = 12/38 (31%), Positives = 25/38 (65%)
 Frame = +3

Query: 114 EKKQVKPSSSKSTNLPWIEKYRPQTFDDIVGNEDTVSR 227
           E+KQ +  S+   +  W+EKY P+ F +++ ++D ++R
Sbjct: 280 EEKQDEEESTPLHHGLWVEKYSPRHFTELL-SDDAINR 316


>SB_59437| Best HMM Match : AAA (HMM E-Value=7.4e-08)
          Length = 568

 Score = 33.9 bits (74), Expect = 0.097
 Identities = 29/108 (26%), Positives = 50/108 (46%), Gaps = 24/108 (22%)
 Frame = +3

Query: 132 PSSSKSTNLPWIEKYRPQTFDDIVGNED---------------------TVSRLAVFAKT 248
           P      +L W++KY+P     I+G +                      T+ + + F K 
Sbjct: 206 PVVKAEASLMWVDKYKPSGIKQIIGQQGDKSNMRKLLNWVRNWHKNRTKTLPKSSFFNKD 265

Query: 249 GNAPNI---IIAGPPGVGKTTTILCLARALLGVSFKDAVLELNASNDR 383
            +  ++   +++GPPGVGKTTT   + +  LG S+    +E+NAS+ R
Sbjct: 266 TDGASLKAALLSGPPGVGKTTTATLVCQE-LGYSY----VEMNASDAR 308


>SB_19368| Best HMM Match : DEAD (HMM E-Value=4)
          Length = 217

 Score = 33.9 bits (74), Expect = 0.097
 Identities = 18/53 (33%), Positives = 25/53 (47%)
 Frame = +3

Query: 174 YRPQTFDDIVGNEDTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTILCLARALL 332
           Y+  T   I+   +   + AV          +I G PG GKTTTI CL + L+
Sbjct: 97  YQDTTVHTIIQELNAGQKRAVCKALTAEDYALILGMPGTGKTTTIACLVKVLI 149


>SB_47632| Best HMM Match : AAA_5 (HMM E-Value=0.00038)
          Length = 1172

 Score = 33.1 bits (72), Expect = 0.17
 Identities = 17/49 (34%), Positives = 23/49 (46%)
 Frame = +3

Query: 183  QTFDDIVGNEDTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTILCLARAL 329
            +T D      DT +         N  +II+AGPPG GK++ I  L   L
Sbjct: 1073 ETLDGTTLTIDTTAATGRCTVVRNRTSIIVAGPPGTGKSSCISALIETL 1121


>SB_18015| Best HMM Match : NACHT (HMM E-Value=5)
          Length = 166

 Score = 32.3 bits (70), Expect = 0.30
 Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 6/57 (10%)
 Frame = +3

Query: 150 TNLPWIEKYRPQT----FDDIVGNED-TVSRLAVFAKTGNAPN-IIIAGPPGVGKTT 302
           T LPW+E     T    F D++  ED +V +L    ++ N    I++ G PG+GKTT
Sbjct: 22  TPLPWMEGLSKHTLQHLFKDLLIAEDGSVVKLCDLLESDNTKKRILLEGNPGIGKTT 78


>SB_42068| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 3367

 Score = 31.9 bits (69), Expect = 0.39
 Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
 Frame = +3

Query: 165  IEKYRPQTFDDIVGNEDTVSR-LAVFAKTGNAPNIIIAGPPGVGKTTTILCLARAL 329
            +E ++  + D +V   DTV     ++        +++ GPPG GKT T+    RAL
Sbjct: 2500 VETHKVASPDVVVPTLDTVRHETLLYTWLAEHKPLVLCGPPGSGKTMTLFSALRAL 2555


>SB_58373| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 75

 Score = 31.1 bits (67), Expect = 0.69
 Identities = 14/24 (58%), Positives = 17/24 (70%)
 Frame = +3

Query: 258 PNIIIAGPPGVGKTTTILCLARAL 329
           PNI+I G PG GK+TT + LA  L
Sbjct: 9   PNILITGTPGTGKSTTGVELANRL 32


>SB_19447| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1110

 Score = 31.1 bits (67), Expect = 0.69
 Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 6/57 (10%)
 Frame = +3

Query: 150 TNLPWIEKYRPQTFDDIVGN----ED-TVSRLAVFAKTGNAPN-IIIAGPPGVGKTT 302
           T LPW+E     T   +  N    ED +V +L    ++ N    I++ G PG+GKTT
Sbjct: 269 TPLPWMEALSKHTLQHLFKNLLIAEDGSVVKLCDLLESDNTKKRILLEGNPGIGKTT 325


>SB_5068| Best HMM Match : DED (HMM E-Value=1.5e-17)
          Length = 786

 Score = 31.1 bits (67), Expect = 0.69
 Identities = 19/77 (24%), Positives = 31/77 (40%)
 Frame = +3

Query: 180 PQTFDDIVGNEDTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTILCLARALLGVSFKDAVL 359
           P    + VG E     +     TG    + I GPPG GK+   + +A  L  +     V 
Sbjct: 102 PAKVPNFVGRESECQAVFTKLTTGPCQIVTITGPPGFGKSCVAIHVAHELFSLGI--CVY 159

Query: 360 ELNASNDRGIDVVRNKI 410
            L+  N   +  + N++
Sbjct: 160 YLSLRNCSSLSCMANQL 176


>SB_2807| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 399

 Score = 31.1 bits (67), Expect = 0.69
 Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
 Frame = +3

Query: 273 AGPPGVGKTTTILCLARALLGVSFKDAVLELNASNDR-GIDVVRNKIKM 416
           +GPPG GK+T I    + L     K AVL ++ S+ R G  ++ +K +M
Sbjct: 127 SGPPGAGKSTFIEFFGKMLTSKGQKVAVLAVDPSSSRTGGSLLGDKTRM 175


>SB_10311| Best HMM Match : S-antigen (HMM E-Value=0.73)
          Length = 617

 Score = 30.7 bits (66), Expect = 0.91
 Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
 Frame = -2

Query: 280 GPAIIMLGALPVLAKTAKR-DTVSSLPTISSKVCGLYFSIHGKFVD 146
           GP++I LG +  L    K  DT+      S  +C +Y  +HGK VD
Sbjct: 558 GPSLISLGKVMGLTVIEKYVDTLDKTFKYSKLLCQVYAGVHGKDVD 603


>SB_25516| Best HMM Match : AAA_2 (HMM E-Value=0)
          Length = 609

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 24/79 (30%), Positives = 35/79 (44%), Gaps = 3/79 (3%)
 Frame = +3

Query: 261 NIIIAGPPGVGKTTTILCLARALLGVSFKDAVLELNASNDRGI---DVVRNKIKMFAQQK 431
           NI++ GP G GKT     +AR  L V F  A+ +  A    G    D+     K+  +  
Sbjct: 272 NILLLGPTGSGKTLLAQTIARC-LDVPF--AICDCTALTQAGYVGEDIESVIAKLLQEAG 328

Query: 432 VTLPPGRHKIVILDEADSM 488
             +   +  IV LDE D +
Sbjct: 329 GNVEKAQQGIVFLDEVDKI 347


>SB_33907| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 56

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = +3

Query: 258 PNIIIAGPPGVGKTTTILCLARALLGVSF 344
           P I++AGPPG GKT     +A    G++F
Sbjct: 18  PGILLAGPPGCGKTLLAKAIANE-SGINF 45


>SB_30760| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1868

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 17/66 (25%), Positives = 31/66 (46%)
 Frame = +3

Query: 180 PQTFDDIVGNEDTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTILCLARALLGVSFKDAVL 359
           P+   + VG +D V ++ V  K      I++  PP  GK++T++     L    +     
Sbjct: 387 PEEIPNFVGRDDLVKKI-VKLKEEKWKLILLVAPPFNGKSSTVIMSGHMLQKKGYPVLYF 445

Query: 360 ELNASN 377
            LNA++
Sbjct: 446 HLNAAS 451


>SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0)
          Length = 611

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = +3

Query: 258 PNIIIAGPPGVGKTTTILCLARALLGVSF 344
           P I++AGPPG GKT     +A    G++F
Sbjct: 18  PGILLAGPPGCGKTLLAKAIANE-SGINF 45


>SB_8110| Best HMM Match : AAA (HMM E-Value=0.0032)
          Length = 1199

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = +3

Query: 156 LPWIEKYRPQTFDDIVGNEDTVSRL 230
           LPW E+++P    +++GN    +RL
Sbjct: 548 LPWSERFKPTCSSEVMGNASATTRL 572


>SB_16952| Best HMM Match : AAA_5 (HMM E-Value=0.47)
          Length = 1345

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = +3

Query: 264 IIIAGPPGVGKTTTILCLARAL 329
           II+AGPPG GK++ I  L   L
Sbjct: 2   IIVAGPPGTGKSSCISALIETL 23


>SB_14841| Best HMM Match : RVT_1 (HMM E-Value=0)
          Length = 1821

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 12/45 (26%), Positives = 24/45 (53%)
 Frame = +3

Query: 120  KQVKPSSSKSTNLPWIEKYRPQTFDDIVGNEDTVSRLAVFAKTGN 254
            +++ P   K+ N+PW+ +       D++ N D + R A+ +K  N
Sbjct: 1158 RKINPYRKKAFNVPWLTR----EIKDLINNRDKLKRKAMVSKLRN 1198


>SB_48632| Best HMM Match : DUF265 (HMM E-Value=7.6e-22)
          Length = 455

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 11/36 (30%), Positives = 21/36 (58%)
 Frame = +3

Query: 222 SRLAVFAKTGNAPNIIIAGPPGVGKTTTILCLARAL 329
           +++  F       ++++ GPPG+GKTT    + +AL
Sbjct: 40  TQVTQFEMAAYKKHVLLTGPPGIGKTTLCSKVKQAL 75


>SB_47951| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 437

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 10/15 (66%), Positives = 13/15 (86%)
 Frame = +3

Query: 267 IIAGPPGVGKTTTIL 311
           +I GPPG GKTTT++
Sbjct: 254 VIHGPPGTGKTTTVV 268


>SB_35763| Best HMM Match : DUF651 (HMM E-Value=0.26)
          Length = 436

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 9/64 (14%)
 Frame = +3

Query: 138 SSKSTNLPWIE---------KYRPQTFDDIVGNEDTVSRLAVFAKTGNAPNIIIAGPPGV 290
           +S+ T LPWIE          Y+      I G++  + +L           +++ G PGV
Sbjct: 354 ASQITPLPWIEFEPHFSLEKMYKEPNITAIDGSKVEIRKLFESGPRRKTRRVLLEGNPGV 413

Query: 291 GKTT 302
           GKT+
Sbjct: 414 GKTS 417


>SB_10268| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 421

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 4/52 (7%)
 Frame = +3

Query: 180 PQTFDDI----VGNEDTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTILCLAR 323
           P  FDD+       EDT    A+  K      + + GP G GK+T I  + R
Sbjct: 157 PIVFDDVRFSYPSREDTEVLKALSFKINPGETVALVGPSGGGKSTVISLIER 208


>SB_7372| Best HMM Match : Rad17 (HMM E-Value=2.7e-09)
          Length = 421

 Score = 23.8 bits (49), Expect(2) = 7.4
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +3

Query: 264 IIIAGPPGVGKTTTILCLARAL 329
           +++ GP G GKT TI  L   L
Sbjct: 108 LLLTGPVGAGKTATIHMLQTEL 129



 Score = 22.2 bits (45), Expect(2) = 7.4
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = +3

Query: 162 WIEKYRPQT 188
           WIEKY+P T
Sbjct: 93  WIEKYKPTT 101


>SB_54958| Best HMM Match : NUDE_C (HMM E-Value=9.8)
          Length = 267

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = +3

Query: 159 PWIEKYRPQTFDDIVGNEDTVSRLAVFAKTGNAP 260
           P   +  P+TFDD + N D   R+AV  +  + P
Sbjct: 34  PASNRLEPETFDDEIMNVDLAKRVAVKLRLEDVP 67


>SB_41548| Best HMM Match : ResIII (HMM E-Value=0.27)
          Length = 514

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 26/106 (24%), Positives = 47/106 (44%), Gaps = 2/106 (1%)
 Frame = +3

Query: 180 PQTFDDIVGNEDTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTILCLARALLGV--SFKDA 353
           P+ F+ ++  E + S   V A +      I+ GPPG GKT   + + + LL +       
Sbjct: 369 PRNFNTLL--ESSQSEALVHALSNRLA--IVQGPPGCGKTFLGVKIVQLLLSLQPQLTGP 424

Query: 354 VLELNASNDRGIDVVRNKIKMFAQQKVTLPPGRHKIVILDEADSMT 491
           VL L   N    + ++  ++   ++ +    GR K   L+E +  T
Sbjct: 425 VLLLTYKNHALDEFLKAMLQFCEKENIVRIGGRCKEPQLEECNLQT 470


>SB_22546| Best HMM Match : ABC_tran (HMM E-Value=0)
          Length = 844

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 17/59 (28%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
 Frame = +3

Query: 264 IIIAGPPGVGKTTTILCLARALLGVSFKDAVLELNASNDRGIDV--VRNKIKMFAQQKV 434
           + + GP G GK+TT+  L R       +D  + ++ +N R +++  +R+KI + +Q+ V
Sbjct: 698 LALVGPSGCGKSTTVSLLERF---YDPEDGEMAIDNANVRQLNLKWLRSKIGIVSQEPV 753


>SB_19460| Best HMM Match : AAA (HMM E-Value=0)
          Length = 340

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 24/86 (27%), Positives = 39/86 (45%), Gaps = 2/86 (2%)
 Frame = +3

Query: 237 FAKTG--NAPNIIIAGPPGVGKTTTILCLARALLGVSFKDAVLELNASNDRGIDVVRNKI 410
           FA+ G      +++ GPPG  KTT +   A +        +  +L +S     D  R   
Sbjct: 39  FARMGLRRPRGVLLYGPPGCCKTTLVRAAASSTHCTFMSLSCAQLFSSYVG--DAERTLR 96

Query: 411 KMFAQQKVTLPPGRHKIVILDEADSM 488
           ++F + + T P     I+ LDE DS+
Sbjct: 97  ELFLKARATAP----AILFLDELDSL 118


>SB_47323| Best HMM Match : 7tm_1 (HMM E-Value=7.6e-09)
          Length = 508

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = -2

Query: 214 SSLPTISSKVCGLYFSIHGKFVDLLELGF 128
           S+L  I + VC LYFS  G F + ++L F
Sbjct: 230 STLGLIPTSVCWLYFSFKGDFGNSIDLLF 258


>SB_43853| Best HMM Match : AAA_5 (HMM E-Value=0)
          Length = 2065

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 10/21 (47%), Positives = 16/21 (76%)
 Frame = +3

Query: 264  IIIAGPPGVGKTTTILCLARA 326
            I++ G PGVGKT+ +  +A+A
Sbjct: 1620 ILLEGSPGVGKTSLVSAIAKA 1640


>SB_33727| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 177

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = +3

Query: 159 PWIEKYRPQTFDDIVGNEDTVSRLAVFAKTGNAP 260
           P   +  P+TFDD + N D   R+AV  +  + P
Sbjct: 34  PASNRLEPETFDDEIMNVDLAKRVAVKLRLEDVP 67


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,466,266
Number of Sequences: 59808
Number of extensions: 290716
Number of successful extensions: 959
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 887
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 955
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1397989795
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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