Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov11e05
(581 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M87338-1|AAB09786.1| 354|Homo sapiens replication factor C, 40-... 219 6e-57
AF045555-4|AAC04860.1| 354|Homo sapiens replication factor C su... 219 6e-57
AC005081-1|AAP22334.1| 354|Homo sapiens unknown protein. 219 6e-57
L07540-1|AAB09784.1| 340|Homo sapiens replication factor C, 36-... 136 7e-32
BC013961-1|AAH13961.1| 340|Homo sapiens replication factor C (a... 136 7e-32
BC001866-1|AAH01866.1| 340|Homo sapiens replication factor C (a... 136 7e-32
AY254323-1|AAO63493.1| 340|Homo sapiens replication factor C (a... 136 7e-32
AB208992-1|BAD92229.1| 351|Homo sapiens replication factor C 5 ... 136 7e-32
CR407651-1|CAG28579.1| 340|Homo sapiens RFC5 protein. 135 9e-32
BT007058-1|AAP35707.1| 320|Homo sapiens replication factor C (a... 133 5e-31
BC002813-1|AAH02813.1| 320|Homo sapiens replication factor C (a... 133 5e-31
AF483622-1|AAL82503.1| 320|Homo sapiens replication factor C (a... 133 5e-31
AC005081-2|AAP22335.1| 320|Homo sapiens unknown protein. 133 5e-31
M87339-1|AAB09785.1| 363|Homo sapiens replication factor C, 37-... 121 2e-27
CR536561-1|CAG38798.1| 363|Homo sapiens RFC4 protein. 121 2e-27
BT006987-1|AAP35633.1| 363|Homo sapiens replication factor C (a... 121 2e-27
BC024022-1|AAH24022.1| 363|Homo sapiens replication factor C (a... 121 2e-27
BC017452-1|AAH17452.1| 363|Homo sapiens replication factor C (a... 121 2e-27
AF538718-1|AAM97933.1| 363|Homo sapiens replication factor C (a... 121 2e-27
L07541-1|AAB07268.1| 356|Homo sapiens replication factor C, 38-... 54 4e-07
BT019668-1|AAV38474.1| 356|Homo sapiens replication factor C (a... 54 4e-07
BC000149-1|AAH00149.1| 356|Homo sapiens replication factor C (a... 54 4e-07
AL139081-1|CAH70947.1| 356|Homo sapiens replication factor C (a... 54 4e-07
AK222572-1|BAD96292.1| 356|Homo sapiens replication factor C 3 ... 54 4e-07
AF484446-1|AAL82505.1| 356|Homo sapiens replication factor C (a... 54 4e-07
BC018184-1|AAH18184.1| 975|Homo sapiens CTF18, chromosome trans... 46 7e-05
BC006437-1|AAH06437.1| 1016|Homo sapiens CHTF18 protein protein. 46 7e-05
BC006278-1|AAH06278.2| 975|Homo sapiens CTF18, chromosome trans... 46 7e-05
AL031033-2|CAB53056.1| 260|Homo sapiens protein ( Human DNA seq... 46 7e-05
AE006465-2|AAK61256.1| 1184|Homo sapiens some homology with holl... 46 7e-05
AL139092-4|CAH73665.1| 445|Homo sapiens Werner helicase interac... 46 1e-04
AL139092-3|CAH73664.1| 665|Homo sapiens Werner helicase interac... 46 1e-04
AK223593-1|BAD97313.1| 665|Homo sapiens Werner helicase interac... 46 1e-04
AF218313-1|AAF80563.1| 445|Homo sapiens putative helicase RUVBL... 46 1e-04
AB209723-1|BAD92960.1| 646|Homo sapiens Werner helicase interac... 46 1e-04
BC018923-1|AAH18923.1| 640|Homo sapiens Werner helicase interac... 44 5e-04
AL139092-2|CAH73663.1| 640|Homo sapiens Werner helicase interac... 44 5e-04
BX537441-1|CAD97683.1| 670|Homo sapiens hypothetical protein pr... 43 7e-04
BC032304-1|AAH32304.1| 670|Homo sapiens RAD17 homolog (S. pombe... 43 7e-04
AY612854-1|AAT09763.1| 670|Homo sapiens RAD17 homolog (S. pombe... 43 7e-04
AJ131296-1|CAB46364.1| 670|Homo sapiens HRAD17 protein protein. 43 7e-04
AJ004977-1|CAA06251.1| 670|Homo sapiens cell cycle checkpoint p... 43 7e-04
AJ001642-1|CAA04894.1| 670|Homo sapiens cell cycle checkpoint p... 43 7e-04
AF126424-1|AAD17334.1| 670|Homo sapiens cell cycle checkpoint p... 43 7e-04
AF112263-1|AAD38878.1| 670|Homo sapiens hRad17 protein protein. 43 7e-04
AF085736-1|AAC36334.1| 681|Homo sapiens RF-C/activator 1 homolo... 43 7e-04
AF076838-1|AAC95520.1| 670|Homo sapiens Rad17-like protein prot... 43 7e-04
AF017748-1|AAD01620.1| 670|Homo sapiens cell cycle checkpoint p... 43 7e-04
AB056152-1|BAB60709.1| 665|Homo sapiens Werner helicase interac... 43 0.001
BC051751-1|AAH51751.1| 1147|Homo sapiens replication factor C (a... 35 0.18
AY600371-1|AAS94325.1| 1147|Homo sapiens replication factor C (a... 35 0.18
AY557611-1|AAT52049.1| 1844|Homo sapiens chromosome fragility as... 35 0.18
AK022797-1|BAB14248.1| 801|Homo sapiens protein ( Homo sapiens ... 35 0.18
AJ314648-1|CAC44537.2| 1844|Homo sapiens ATP(GTP)-binding protei... 35 0.18
L23320-1|AAA16121.1| 1148|Homo sapiens replication factor C larg... 34 0.32
BC051786-1|AAH51786.1| 1148|Homo sapiens RFC1 protein protein. 34 0.32
BC035297-1|AAH35297.1| 1148|Homo sapiens replication factor C (a... 34 0.32
Z22642-1|CAA80355.1| 1147|Homo sapiens PO-GA protein. 33 0.56
AY072792-1|AAL68396.1| 994|Homo sapiens PAAD and NACHT-containi... 33 0.56
AK056688-1|BAB71254.1| 919|Homo sapiens protein ( Homo sapiens ... 33 0.56
AF482706-1|AAL88672.1| 916|Homo sapiens ribonuclease inhibitor ... 33 0.56
AF479747-1|AAL87104.1| 994|Homo sapiens PYRIN-containing APAF1-... 33 0.56
AF442488-1|AAL35293.1| 994|Homo sapiens NALP4 protein. 33 0.56
AF040250-1|AAB99788.1| 1147|Homo sapiens DNA binding protein pro... 33 0.56
AY682080-1|AAT74625.1| 4646|Homo sapiens dynein, cytoplasmic, he... 33 0.97
AB002323-1|BAA20783.3| 4658|Homo sapiens KIAA0325 protein protein. 33 0.97
X76040-1|CAA53625.1| 937|Homo sapiens Lon protease-like protein... 32 1.3
X74215-1|CAA52291.1| 845|Homo sapiens Lon protease-like protein... 32 1.3
U02389-1|AAA61616.1| 962|Homo sapiens hLON ATP-dependent protea... 32 1.3
BC109218-1|AAI09219.1| 848|Homo sapiens LONP1 protein protein. 32 1.3
BC004934-1|AAH04934.1| 517|Homo sapiens Unknown (protein for IM... 32 1.3
BC000235-1|AAH00235.1| 959|Homo sapiens lon peptidase 1, mitoch... 32 1.3
AK096626-1|BAC04829.1| 895|Homo sapiens protein ( Homo sapiens ... 32 1.3
AF059309-1|AAD24414.1| 959|Homo sapiens LON protease protein. 32 1.3
L24544-1|AAA70430.1| 993|Homo sapiens DNA helicase protein. 31 2.2
D42046-1|BAA07647.1| 1077|Homo sapiens KIAA0083 protein. 31 2.2
BC053574-1|AAH53574.1| 494|Homo sapiens DNA2L protein protein. 31 2.2
BC050576-1|AAH50576.1| 479|Homo sapiens chromosome 9 open readi... 31 2.2
BC050326-1|AAH50326.1| 994|Homo sapiens NLR family, pyrin domai... 31 2.2
BC041115-1|AAH41115.1| 435|Homo sapiens DNA2L protein protein. 31 2.2
BC034776-1|AAH34776.1| 479|Homo sapiens chromosome 9 open readi... 31 2.2
BC025299-1|AAH25299.1| 868|Homo sapiens Unknown (protein for IM... 31 2.2
AY364261-1|AAQ76820.1| 310|Homo sapiens hypothetical protein pr... 31 2.2
AL445645-1|CAH72109.1| 479|Homo sapiens chromosome 9 open readi... 31 2.2
AL160165-5|CAH70535.1| 479|Homo sapiens chromosome 9 open readi... 31 2.2
AL136233-5|CAI17238.1| 1040|Homo sapiens DNA2 DNA replication he... 31 2.2
AK057266-1|BAB71402.1| 479|Homo sapiens protein ( Homo sapiens ... 31 2.2
AK022348-1|BAB14017.1| 392|Homo sapiens protein ( Homo sapiens ... 31 2.2
AK001211-1|BAA91556.1| 310|Homo sapiens protein ( Homo sapiens ... 31 2.2
BC008634-1|AAH08634.1| 310|Homo sapiens ATP binding domain 1 fa... 31 3.0
BC007815-1|AAH07815.1| 310|Homo sapiens ATP binding domain 1 fa... 31 3.0
BC000981-1|AAH00981.1| 753|Homo sapiens spermatogenesis associa... 31 3.0
AY358864-1|AAQ89223.1| 310|Homo sapiens AGAA5828 protein. 31 3.0
AL034380-4|CAB92117.1| 310|Homo sapiens novel protein protein. 31 3.0
AL034380-3|CAI21619.1| 172|Homo sapiens novel protein protein. 31 3.0
AK023232-1|BAB14482.1| 620|Homo sapiens protein ( Homo sapiens ... 31 3.0
AK022535-1|BAB14084.1| 310|Homo sapiens protein ( Homo sapiens ... 31 3.0
L14754-1|AAA53082.1| 993|Homo sapiens DNA-binding protein protein. 31 3.9
BC105090-1|AAI05091.1| 993|Homo sapiens immunoglobulin mu bindi... 31 3.9
BC105088-1|AAI05089.1| 993|Homo sapiens immunoglobulin mu bindi... 31 3.9
BC000290-1|AAH00290.1| 868|Homo sapiens IGHMBP2 protein protein. 31 3.9
Y18418-1|CAB46271.1| 456|Homo sapiens erythrocyte cytosolic pro... 30 5.2
D80009-1|BAA11504.2| 1285|Homo sapiens KIAA0187 protein. 30 5.2
DQ469310-1|ABF13334.1| 386|Homo sapiens RUVBL1-FK protein. 30 5.2
BT007057-1|AAP35706.1| 456|Homo sapiens RuvB-like 1 (E. coli) p... 30 5.2
BC150252-1|AAI50253.1| 1282|Homo sapiens BMS1 homolog, ribosome ... 30 5.2
BC043345-1|AAH43345.1| 1282|Homo sapiens BMS1 homolog, ribosome ... 30 5.2
BC035132-1|AAH35132.1| 743|Homo sapiens threonine synthase-like... 30 5.2
BC012886-1|AAH12886.1| 456|Homo sapiens RuvB-like 1 (E. coli) p... 30 5.2
BC009312-1|AAH09312.1| 1003|Homo sapiens Mov10, Moloney leukemia... 30 5.2
BC004499-1|AAH04499.2| 601|Homo sapiens MOV10 protein protein. 30 5.2
BC002993-1|AAH02993.1| 456|Homo sapiens RuvB-like 1 (E. coli) p... 30 5.2
BC002548-1|AAH02548.1| 1003|Homo sapiens Mov10, Moloney leukemia... 30 5.2
AL603832-3|CAI14056.1| 947|Homo sapiens Mov10, Moloney leukemia... 30 5.2
AL603832-2|CAI14055.1| 1003|Homo sapiens Mov10, Moloney leukemia... 30 5.2
AL022344-4|CAI23617.1| 1282|Homo sapiens BMS1-like, ribosome ass... 30 5.2
AK222575-1|BAD96295.1| 456|Homo sapiens TATA binding protein in... 30 5.2
AK222563-1|BAD96283.1| 456|Homo sapiens TATA binding protein in... 30 5.2
AK074174-1|BAB85000.1| 925|Homo sapiens FLJ00247 protein protein. 30 5.2
AJ010058-1|CAA08986.1| 456|Homo sapiens Nuclear matrix protein ... 30 5.2
AF380344-1|AAM45570.1| 456|Homo sapiens pontin 52 protein. 30 5.2
AF099084-1|AAD04427.1| 456|Homo sapiens Pontin52 protein. 30 5.2
AF098534-1|AAC97951.1| 584|Homo sapiens RAD17 isoform 4 protein. 30 5.2
AF070735-1|AAC77819.1| 456|Homo sapiens RuvB-like protein RUVBL... 30 5.2
AB046851-1|BAB13457.1| 1032|Homo sapiens KIAA1631 protein protein. 30 5.2
AB012122-1|BAA28169.1| 456|Homo sapiens TIP49 protein. 30 5.2
X69821-1|CAA49475.1| 521|Homo sapiens LLDBP protein. 30 6.8
BC130373-1|AAI30374.1| 633|Homo sapiens ClpX caseinolytic pepti... 30 6.8
BC007426-1|AAH07426.1| 172|Homo sapiens TAF9 RNA polymerase II,... 30 6.8
BC007349-1|AAH07349.1| 172|Homo sapiens TAF9 RNA polymerase II,... 30 6.8
AJ878881-1|CAI48031.1| 172|Homo sapiens coilin-interacting nulc... 30 6.8
AJ878880-1|CAI48030.1| 172|Homo sapiens coilin-interacting nucl... 30 6.8
AJ276980-1|CAC01291.1| 633|Homo sapiens ClpX protein protein. 30 6.8
AJ006267-1|CAA06933.2| 633|Homo sapiens ClpX-like protein protein. 30 6.8
AF151895-1|AAD34132.1| 172|Homo sapiens CGI-137 protein protein. 30 6.8
AF110777-1|AAF14860.1| 172|Homo sapiens adrenal gland protein A... 30 6.8
>M87338-1|AAB09786.1| 354|Homo sapiens replication factor C, 40-kDa
subunit protein.
Length = 354
Score = 219 bits (535), Expect = 6e-57
Identities = 104/128 (81%), Positives = 113/128 (88%)
Frame = +3
Query: 132 PSSSKSTNLPWIEKYRPQTFDDIVGNEDTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTIL 311
P S+ LPW+EKYRP ++IVGNEDTVSRL VFA+ GN PNIIIAGPPG GKTT+IL
Sbjct: 28 PGSAGHYELPWVEKYRPVKLNEIVGNEDTVSRLEVFAREGNVPNIIIAGPPGTGKTTSIL 87
Query: 312 CLARALLGVSFKDAVLELNASNDRGIDVVRNKIKMFAQQKVTLPPGRHKIVILDEADSMT 491
CLARALLG + KDA+LELNASNDRGIDVVRNKIKMFAQQKVTLP GRHKI+ILDEADSMT
Sbjct: 88 CLARALLGPALKDAMLELNASNDRGIDVVRNKIKMFAQQKVTLPKGRHKIIILDEADSMT 147
Query: 492 DGAQQALR 515
DGAQQALR
Sbjct: 148 DGAQQALR 155
Score = 36.7 bits (81), Expect = 0.060
Identities = 16/21 (76%), Positives = 18/21 (85%)
Frame = +1
Query: 517 RTMELYSSTTRFALAANNSEK 579
RTME+YS TTRFALA N S+K
Sbjct: 156 RTMEIYSKTTRFALACNASDK 176
>AF045555-4|AAC04860.1| 354|Homo sapiens replication factor C
subunit 2 protein.
Length = 354
Score = 219 bits (535), Expect = 6e-57
Identities = 104/128 (81%), Positives = 113/128 (88%)
Frame = +3
Query: 132 PSSSKSTNLPWIEKYRPQTFDDIVGNEDTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTIL 311
P S+ LPW+EKYRP ++IVGNEDTVSRL VFA+ GN PNIIIAGPPG GKTT+IL
Sbjct: 28 PGSAGHYELPWVEKYRPVKLNEIVGNEDTVSRLEVFAREGNVPNIIIAGPPGTGKTTSIL 87
Query: 312 CLARALLGVSFKDAVLELNASNDRGIDVVRNKIKMFAQQKVTLPPGRHKIVILDEADSMT 491
CLARALLG + KDA+LELNASNDRGIDVVRNKIKMFAQQKVTLP GRHKI+ILDEADSMT
Sbjct: 88 CLARALLGPALKDAMLELNASNDRGIDVVRNKIKMFAQQKVTLPKGRHKIIILDEADSMT 147
Query: 492 DGAQQALR 515
DGAQQALR
Sbjct: 148 DGAQQALR 155
Score = 36.7 bits (81), Expect = 0.060
Identities = 16/21 (76%), Positives = 18/21 (85%)
Frame = +1
Query: 517 RTMELYSSTTRFALAANNSEK 579
RTME+YS TTRFALA N S+K
Sbjct: 156 RTMEIYSKTTRFALACNASDK 176
>AC005081-1|AAP22334.1| 354|Homo sapiens unknown protein.
Length = 354
Score = 219 bits (535), Expect = 6e-57
Identities = 104/128 (81%), Positives = 113/128 (88%)
Frame = +3
Query: 132 PSSSKSTNLPWIEKYRPQTFDDIVGNEDTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTIL 311
P S+ LPW+EKYRP ++IVGNEDTVSRL VFA+ GN PNIIIAGPPG GKTT+IL
Sbjct: 28 PGSAGHYELPWVEKYRPVKLNEIVGNEDTVSRLEVFAREGNVPNIIIAGPPGTGKTTSIL 87
Query: 312 CLARALLGVSFKDAVLELNASNDRGIDVVRNKIKMFAQQKVTLPPGRHKIVILDEADSMT 491
CLARALLG + KDA+LELNASNDRGIDVVRNKIKMFAQQKVTLP GRHKI+ILDEADSMT
Sbjct: 88 CLARALLGPALKDAMLELNASNDRGIDVVRNKIKMFAQQKVTLPKGRHKIIILDEADSMT 147
Query: 492 DGAQQALR 515
DGAQQALR
Sbjct: 148 DGAQQALR 155
Score = 36.7 bits (81), Expect = 0.060
Identities = 16/21 (76%), Positives = 18/21 (85%)
Frame = +1
Query: 517 RTMELYSSTTRFALAANNSEK 579
RTME+YS TTRFALA N S+K
Sbjct: 156 RTMEIYSKTTRFALACNASDK 176
>L07540-1|AAB09784.1| 340|Homo sapiens replication factor C, 36-kDa
subunit protein.
Length = 340
Score = 136 bits (328), Expect = 7e-32
Identities = 67/148 (45%), Positives = 94/148 (63%), Gaps = 1/148 (0%)
Frame = +3
Query: 117 KKQVKPSSSKSTNLPWIEKYRPQTFDDIVGNEDTVSRLAVFAKTGNAPNIIIAGPPGVGK 296
K+Q +P+++K NLPW+EKYRPQT +D++ ++D +S + F P++++ GPPG GK
Sbjct: 7 KQQEQPAATKIRNLPWVEKYRPQTLNDLISHQDILSTIQKFINEDRLPHLLLYGPPGTGK 66
Query: 297 TTTILCLARALL-GVSFKDAVLELNASNDRGIDVVRNKIKMFAQQKVTLPPGRHKIVILD 473
T+TIL A+ L F VLELNAS+DRGID++R I FA + G K+VILD
Sbjct: 67 TSTILACAKQLYKDKEFGSMVLELNASDDRGIDIIRGPILSFASTRTIFKKG-FKLVILD 125
Query: 474 EADSMTDGAQQALRTHHGAVFQYNSFCI 557
EAD+MT AQ ALR + FC+
Sbjct: 126 EADAMTQDAQNALRRVIEKFTENTRFCL 153
>BC013961-1|AAH13961.1| 340|Homo sapiens replication factor C
(activator 1) 5, 36.5kDa protein.
Length = 340
Score = 136 bits (328), Expect = 7e-32
Identities = 67/148 (45%), Positives = 94/148 (63%), Gaps = 1/148 (0%)
Frame = +3
Query: 117 KKQVKPSSSKSTNLPWIEKYRPQTFDDIVGNEDTVSRLAVFAKTGNAPNIIIAGPPGVGK 296
K+Q +P+++K NLPW+EKYRPQT +D++ ++D +S + F P++++ GPPG GK
Sbjct: 7 KQQEQPAATKIRNLPWVEKYRPQTLNDLISHQDILSTIQKFINEDRLPHLLLYGPPGTGK 66
Query: 297 TTTILCLARALL-GVSFKDAVLELNASNDRGIDVVRNKIKMFAQQKVTLPPGRHKIVILD 473
T+TIL A+ L F VLELNAS+DRGID++R I FA + G K+VILD
Sbjct: 67 TSTILACAKQLYKDKEFGSMVLELNASDDRGIDIIRGPILSFASTRTIFKKG-FKLVILD 125
Query: 474 EADSMTDGAQQALRTHHGAVFQYNSFCI 557
EAD+MT AQ ALR + FC+
Sbjct: 126 EADAMTQDAQNALRRVIEKFTENTRFCL 153
>BC001866-1|AAH01866.1| 340|Homo sapiens replication factor C
(activator 1) 5, 36.5kDa protein.
Length = 340
Score = 136 bits (328), Expect = 7e-32
Identities = 67/148 (45%), Positives = 94/148 (63%), Gaps = 1/148 (0%)
Frame = +3
Query: 117 KKQVKPSSSKSTNLPWIEKYRPQTFDDIVGNEDTVSRLAVFAKTGNAPNIIIAGPPGVGK 296
K+Q +P+++K NLPW+EKYRPQT +D++ ++D +S + F P++++ GPPG GK
Sbjct: 7 KQQEQPAATKIRNLPWVEKYRPQTLNDLISHQDILSTIQKFINEDRLPHLLLYGPPGTGK 66
Query: 297 TTTILCLARALL-GVSFKDAVLELNASNDRGIDVVRNKIKMFAQQKVTLPPGRHKIVILD 473
T+TIL A+ L F VLELNAS+DRGID++R I FA + G K+VILD
Sbjct: 67 TSTILACAKQLYKDKEFGSMVLELNASDDRGIDIIRGPILSFASTRTIFKKG-FKLVILD 125
Query: 474 EADSMTDGAQQALRTHHGAVFQYNSFCI 557
EAD+MT AQ ALR + FC+
Sbjct: 126 EADAMTQDAQNALRRVIEKFTENTRFCL 153
>AY254323-1|AAO63493.1| 340|Homo sapiens replication factor C
(activator 1) 5, 36.5kDa protein.
Length = 340
Score = 136 bits (328), Expect = 7e-32
Identities = 67/148 (45%), Positives = 94/148 (63%), Gaps = 1/148 (0%)
Frame = +3
Query: 117 KKQVKPSSSKSTNLPWIEKYRPQTFDDIVGNEDTVSRLAVFAKTGNAPNIIIAGPPGVGK 296
K+Q +P+++K NLPW+EKYRPQT +D++ ++D +S + F P++++ GPPG GK
Sbjct: 7 KQQEQPAATKIRNLPWVEKYRPQTLNDLISHQDILSTIQKFINEDRLPHLLLYGPPGTGK 66
Query: 297 TTTILCLARALL-GVSFKDAVLELNASNDRGIDVVRNKIKMFAQQKVTLPPGRHKIVILD 473
T+TIL A+ L F VLELNAS+DRGID++R I FA + G K+VILD
Sbjct: 67 TSTILACAKQLYKDKEFGSMVLELNASDDRGIDIIRGPILSFASTRTIFKKG-FKLVILD 125
Query: 474 EADSMTDGAQQALRTHHGAVFQYNSFCI 557
EAD+MT AQ ALR + FC+
Sbjct: 126 EADAMTQDAQNALRRVIEKFTENTRFCL 153
>AB208992-1|BAD92229.1| 351|Homo sapiens replication factor C 5
isoform 1 variant protein.
Length = 351
Score = 136 bits (328), Expect = 7e-32
Identities = 67/148 (45%), Positives = 94/148 (63%), Gaps = 1/148 (0%)
Frame = +3
Query: 117 KKQVKPSSSKSTNLPWIEKYRPQTFDDIVGNEDTVSRLAVFAKTGNAPNIIIAGPPGVGK 296
K+Q +P+++K NLPW+EKYRPQT +D++ ++D +S + F P++++ GPPG GK
Sbjct: 21 KQQEQPAATKIRNLPWVEKYRPQTLNDLISHQDILSTIQKFINEDRLPHLLLYGPPGTGK 80
Query: 297 TTTILCLARALL-GVSFKDAVLELNASNDRGIDVVRNKIKMFAQQKVTLPPGRHKIVILD 473
T+TIL A+ L F VLELNAS+DRGID++R I FA + G K+VILD
Sbjct: 81 TSTILACAKQLYKDKEFGSMVLELNASDDRGIDIIRGPILSFASTRTIFKKG-FKLVILD 139
Query: 474 EADSMTDGAQQALRTHHGAVFQYNSFCI 557
EAD+MT AQ ALR + FC+
Sbjct: 140 EADAMTQDAQNALRRVIEKFTENTRFCL 167
>CR407651-1|CAG28579.1| 340|Homo sapiens RFC5 protein.
Length = 340
Score = 135 bits (327), Expect = 9e-32
Identities = 67/148 (45%), Positives = 94/148 (63%), Gaps = 1/148 (0%)
Frame = +3
Query: 117 KKQVKPSSSKSTNLPWIEKYRPQTFDDIVGNEDTVSRLAVFAKTGNAPNIIIAGPPGVGK 296
K+Q +P+++K NLPW+EKYRPQT +D++ ++D +S + F P++++ GPPG GK
Sbjct: 7 KQQEQPAATKIRNLPWVEKYRPQTLNDLISHQDILSTIQKFINEDRLPHLLLYGPPGTGK 66
Query: 297 TTTILCLARALL-GVSFKDAVLELNASNDRGIDVVRNKIKMFAQQKVTLPPGRHKIVILD 473
T+TIL A+ L F VLELNAS+DRGID++R I FA + G K+VILD
Sbjct: 67 TSTILACAKQLYKDKEFGSMVLELNASDDRGIDIIRGPILSFASTRTIFKKG-FKLVILD 125
Query: 474 EADSMTDGAQQALRTHHGAVFQYNSFCI 557
EAD+MT AQ ALR + FC+
Sbjct: 126 EADAMTQDAQNALRGVIEKFTENTRFCL 153
>BT007058-1|AAP35707.1| 320|Homo sapiens replication factor C
(activator 1) 2, 40kDa protein.
Length = 320
Score = 133 bits (321), Expect = 5e-31
Identities = 62/94 (65%), Positives = 73/94 (77%)
Frame = +3
Query: 132 PSSSKSTNLPWIEKYRPQTFDDIVGNEDTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTIL 311
P S+ LPW+EKYRP ++IVGNEDTVSRL VFA+ GN PNIIIAGPPG GKTT+IL
Sbjct: 28 PGSAGHYELPWVEKYRPVKLNEIVGNEDTVSRLEVFAREGNVPNIIIAGPPGTGKTTSIL 87
Query: 312 CLARALLGVSFKDAVLELNASNDRGIDVVRNKIK 413
CLARALLG + KDA+LELNASND D + ++
Sbjct: 88 CLARALLGPALKDAMLELNASNDSMTDGAQQALR 121
Score = 36.7 bits (81), Expect = 0.060
Identities = 16/21 (76%), Positives = 18/21 (85%)
Frame = +1
Query: 517 RTMELYSSTTRFALAANNSEK 579
RTME+YS TTRFALA N S+K
Sbjct: 122 RTMEIYSKTTRFALACNASDK 142
>BC002813-1|AAH02813.1| 320|Homo sapiens replication factor C
(activator 1) 2, 40kDa protein.
Length = 320
Score = 133 bits (321), Expect = 5e-31
Identities = 62/94 (65%), Positives = 73/94 (77%)
Frame = +3
Query: 132 PSSSKSTNLPWIEKYRPQTFDDIVGNEDTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTIL 311
P S+ LPW+EKYRP ++IVGNEDTVSRL VFA+ GN PNIIIAGPPG GKTT+IL
Sbjct: 28 PGSAGHYELPWVEKYRPVKLNEIVGNEDTVSRLEVFAREGNVPNIIIAGPPGTGKTTSIL 87
Query: 312 CLARALLGVSFKDAVLELNASNDRGIDVVRNKIK 413
CLARALLG + KDA+LELNASND D + ++
Sbjct: 88 CLARALLGPALKDAMLELNASNDSMTDGAQQALR 121
Score = 36.7 bits (81), Expect = 0.060
Identities = 16/21 (76%), Positives = 18/21 (85%)
Frame = +1
Query: 517 RTMELYSSTTRFALAANNSEK 579
RTME+YS TTRFALA N S+K
Sbjct: 122 RTMEIYSKTTRFALACNASDK 142
>AF483622-1|AAL82503.1| 320|Homo sapiens replication factor C
(activator 1) 2 (40kD) protein.
Length = 320
Score = 133 bits (321), Expect = 5e-31
Identities = 62/94 (65%), Positives = 73/94 (77%)
Frame = +3
Query: 132 PSSSKSTNLPWIEKYRPQTFDDIVGNEDTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTIL 311
P S+ LPW+EKYRP ++IVGNEDTVSRL VFA+ GN PNIIIAGPPG GKTT+IL
Sbjct: 28 PGSAGHYELPWVEKYRPVKLNEIVGNEDTVSRLEVFAREGNVPNIIIAGPPGTGKTTSIL 87
Query: 312 CLARALLGVSFKDAVLELNASNDRGIDVVRNKIK 413
CLARALLG + KDA+LELNASND D + ++
Sbjct: 88 CLARALLGPALKDAMLELNASNDSMTDGAQQALR 121
Score = 36.7 bits (81), Expect = 0.060
Identities = 16/21 (76%), Positives = 18/21 (85%)
Frame = +1
Query: 517 RTMELYSSTTRFALAANNSEK 579
RTME+YS TTRFALA N S+K
Sbjct: 122 RTMEIYSKTTRFALACNASDK 142
>AC005081-2|AAP22335.1| 320|Homo sapiens unknown protein.
Length = 320
Score = 133 bits (321), Expect = 5e-31
Identities = 62/94 (65%), Positives = 73/94 (77%)
Frame = +3
Query: 132 PSSSKSTNLPWIEKYRPQTFDDIVGNEDTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTIL 311
P S+ LPW+EKYRP ++IVGNEDTVSRL VFA+ GN PNIIIAGPPG GKTT+IL
Sbjct: 28 PGSAGHYELPWVEKYRPVKLNEIVGNEDTVSRLEVFAREGNVPNIIIAGPPGTGKTTSIL 87
Query: 312 CLARALLGVSFKDAVLELNASNDRGIDVVRNKIK 413
CLARALLG + KDA+LELNASND D + ++
Sbjct: 88 CLARALLGPALKDAMLELNASNDSMTDGAQQALR 121
Score = 36.7 bits (81), Expect = 0.060
Identities = 16/21 (76%), Positives = 18/21 (85%)
Frame = +1
Query: 517 RTMELYSSTTRFALAANNSEK 579
RTME+YS TTRFALA N S+K
Sbjct: 122 RTMEIYSKTTRFALACNASDK 142
>M87339-1|AAB09785.1| 363|Homo sapiens replication factor C, 37-kDa
subunit protein.
Length = 363
Score = 121 bits (292), Expect = 2e-27
Identities = 68/147 (46%), Positives = 89/147 (60%), Gaps = 7/147 (4%)
Frame = +3
Query: 138 SSKSTNLPWIEKYRPQTFDDIVGNEDTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTILCL 317
+ K+ +PW+EKYRP+ D++ E+ V+ L + + PN++ GPPG GKT+TIL
Sbjct: 32 NKKAKPVPWVEKYRPKCVDEVAFQEEVVAVLKKSLEGADLPNLLFYGPPGTGKTSTILAA 91
Query: 318 ARALLGVS-FKDAVLELNASNDRGIDVVRNKIKMFAQQKVT------LPPGRHKIVILDE 476
AR L G F+ VLELNAS++RGI VVR K+K FAQ V+ P KIVILDE
Sbjct: 92 ARELFGPELFRLRVLELNASDERGIQVVREKVKNFAQLTVSGSRSDGKPCPPFKIVILDE 151
Query: 477 ADSMTDGAQQALRTHHGAVFQYNSFCI 557
ADSMT AQ ALR + FC+
Sbjct: 152 ADSMTSAAQAALRRTMEKESKTTRFCL 178
>CR536561-1|CAG38798.1| 363|Homo sapiens RFC4 protein.
Length = 363
Score = 121 bits (292), Expect = 2e-27
Identities = 68/147 (46%), Positives = 89/147 (60%), Gaps = 7/147 (4%)
Frame = +3
Query: 138 SSKSTNLPWIEKYRPQTFDDIVGNEDTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTILCL 317
+ K+ +PW+EKYRP+ D++ E+ V+ L + + PN++ GPPG GKT+TIL
Sbjct: 32 NKKAKPVPWVEKYRPKCVDEVAFQEEVVAVLKKSLEGADLPNLLFYGPPGTGKTSTILAA 91
Query: 318 ARALLGVS-FKDAVLELNASNDRGIDVVRNKIKMFAQQKVT------LPPGRHKIVILDE 476
AR L G F+ VLELNAS++RGI VVR K+K FAQ V+ P KIVILDE
Sbjct: 92 ARELFGPELFRLRVLELNASDERGIQVVREKVKNFAQLTVSGSRSDGKPCPPFKIVILDE 151
Query: 477 ADSMTDGAQQALRTHHGAVFQYNSFCI 557
ADSMT AQ ALR + FC+
Sbjct: 152 ADSMTSAAQAALRRTMEKESKTTRFCL 178
>BT006987-1|AAP35633.1| 363|Homo sapiens replication factor C
(activator 1) 4, 37kDa protein.
Length = 363
Score = 121 bits (292), Expect = 2e-27
Identities = 68/147 (46%), Positives = 89/147 (60%), Gaps = 7/147 (4%)
Frame = +3
Query: 138 SSKSTNLPWIEKYRPQTFDDIVGNEDTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTILCL 317
+ K+ +PW+EKYRP+ D++ E+ V+ L + + PN++ GPPG GKT+TIL
Sbjct: 32 NKKAKPVPWVEKYRPKCVDEVAFQEEVVAVLKKSLEGADLPNLLFYGPPGTGKTSTILAA 91
Query: 318 ARALLGVS-FKDAVLELNASNDRGIDVVRNKIKMFAQQKVT------LPPGRHKIVILDE 476
AR L G F+ VLELNAS++RGI VVR K+K FAQ V+ P KIVILDE
Sbjct: 92 ARELFGPELFRLRVLELNASDERGIQVVREKVKNFAQLTVSGSRSDGKPCPPFKIVILDE 151
Query: 477 ADSMTDGAQQALRTHHGAVFQYNSFCI 557
ADSMT AQ ALR + FC+
Sbjct: 152 ADSMTSAAQAALRRTMEKESKTTRFCL 178
>BC024022-1|AAH24022.1| 363|Homo sapiens replication factor C
(activator 1) 4, 37kDa protein.
Length = 363
Score = 121 bits (292), Expect = 2e-27
Identities = 68/147 (46%), Positives = 89/147 (60%), Gaps = 7/147 (4%)
Frame = +3
Query: 138 SSKSTNLPWIEKYRPQTFDDIVGNEDTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTILCL 317
+ K+ +PW+EKYRP+ D++ E+ V+ L + + PN++ GPPG GKT+TIL
Sbjct: 32 NKKAKPVPWVEKYRPKCVDEVAFQEEVVAVLKKSLEGADLPNLLFYGPPGTGKTSTILAA 91
Query: 318 ARALLGVS-FKDAVLELNASNDRGIDVVRNKIKMFAQQKVT------LPPGRHKIVILDE 476
AR L G F+ VLELNAS++RGI VVR K+K FAQ V+ P KIVILDE
Sbjct: 92 ARELFGPELFRLRVLELNASDERGIQVVREKVKNFAQLTVSGSRSDGKPCPPFKIVILDE 151
Query: 477 ADSMTDGAQQALRTHHGAVFQYNSFCI 557
ADSMT AQ ALR + FC+
Sbjct: 152 ADSMTSAAQAALRRTMEKESKTTRFCL 178
>BC017452-1|AAH17452.1| 363|Homo sapiens replication factor C
(activator 1) 4, 37kDa protein.
Length = 363
Score = 121 bits (292), Expect = 2e-27
Identities = 68/147 (46%), Positives = 89/147 (60%), Gaps = 7/147 (4%)
Frame = +3
Query: 138 SSKSTNLPWIEKYRPQTFDDIVGNEDTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTILCL 317
+ K+ +PW+EKYRP+ D++ E+ V+ L + + PN++ GPPG GKT+TIL
Sbjct: 32 NKKAKPVPWVEKYRPKCVDEVAFQEEVVAVLKKSLEGADLPNLLFYGPPGTGKTSTILAA 91
Query: 318 ARALLGVS-FKDAVLELNASNDRGIDVVRNKIKMFAQQKVT------LPPGRHKIVILDE 476
AR L G F+ VLELNAS++RGI VVR K+K FAQ V+ P KIVILDE
Sbjct: 92 ARELFGPELFRLRVLELNASDERGIQVVREKVKNFAQLTVSGSRSDGKPCPPFKIVILDE 151
Query: 477 ADSMTDGAQQALRTHHGAVFQYNSFCI 557
ADSMT AQ ALR + FC+
Sbjct: 152 ADSMTSAAQAALRRTMEKESKTTRFCL 178
>AF538718-1|AAM97933.1| 363|Homo sapiens replication factor C
(activator 1) 4 (37kD) protein.
Length = 363
Score = 121 bits (292), Expect = 2e-27
Identities = 68/147 (46%), Positives = 89/147 (60%), Gaps = 7/147 (4%)
Frame = +3
Query: 138 SSKSTNLPWIEKYRPQTFDDIVGNEDTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTILCL 317
+ K+ +PW+EKYRP+ D++ E+ V+ L + + PN++ GPPG GKT+TIL
Sbjct: 32 NKKAKPVPWVEKYRPKCVDEVAFQEEVVAVLKKSLEGADLPNLLFYGPPGTGKTSTILAA 91
Query: 318 ARALLGVS-FKDAVLELNASNDRGIDVVRNKIKMFAQQKVT------LPPGRHKIVILDE 476
AR L G F+ VLELNAS++RGI VVR K+K FAQ V+ P KIVILDE
Sbjct: 92 ARELFGPELFRLRVLELNASDERGIQVVREKVKNFAQLTVSGSRSDGKPCPPFKIVILDE 151
Query: 477 ADSMTDGAQQALRTHHGAVFQYNSFCI 557
ADSMT AQ ALR + FC+
Sbjct: 152 ADSMTSAAQAALRRTMEKESKTTRFCL 178
>L07541-1|AAB07268.1| 356|Homo sapiens replication factor C, 38-kDa
subunit protein.
Length = 356
Score = 54.0 bits (124), Expect = 4e-07
Identities = 42/146 (28%), Positives = 69/146 (47%), Gaps = 28/146 (19%)
Frame = +3
Query: 162 WIEKYRPQTFDDIVGNEDTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTILCLARALLGVS 341
W++KYRP + + +++ ++L + G+ P++++ GP G GK T I+C+ R L GV
Sbjct: 4 WVDKYRPCSLGRLDYHKEQAAQLRNLVQCGDFPHLLVYGPSGAGKKTRIMCILRELYGVG 63
Query: 342 FK------------------------DAVLELNASNDRGID--VVRNKIKMFA--QQKVT 437
+ + LE+N S+ D V++ +K A QQ T
Sbjct: 64 VEKLRIEHQTITTPSKKKIEISTIASNYHLEVNPSDAGNSDRVVIQEMLKTVAQSQQLET 123
Query: 438 LPPGRHKIVILDEADSMTDGAQQALR 515
K+V+L E D +T AQ ALR
Sbjct: 124 NSQRDFKVVLLTEVDKLTKDAQHALR 149
>BT019668-1|AAV38474.1| 356|Homo sapiens replication factor C
(activator 1) 3, 38kDa protein.
Length = 356
Score = 54.0 bits (124), Expect = 4e-07
Identities = 42/146 (28%), Positives = 69/146 (47%), Gaps = 28/146 (19%)
Frame = +3
Query: 162 WIEKYRPQTFDDIVGNEDTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTILCLARALLGVS 341
W++KYRP + + +++ ++L + G+ P++++ GP G GK T I+C+ R L GV
Sbjct: 4 WVDKYRPCSLGRLDYHKEQAAQLRNLVQCGDFPHLLVYGPSGAGKKTRIMCILRELYGVG 63
Query: 342 FK------------------------DAVLELNASNDRGID--VVRNKIKMFA--QQKVT 437
+ + LE+N S+ D V++ +K A QQ T
Sbjct: 64 VEKLRIEHQTITTPSKKKIEISTIASNYHLEVNPSDAGNSDRVVIQEMLKTVAQSQQLET 123
Query: 438 LPPGRHKIVILDEADSMTDGAQQALR 515
K+V+L E D +T AQ ALR
Sbjct: 124 NSQRDFKVVLLTEVDKLTKDAQHALR 149
>BC000149-1|AAH00149.1| 356|Homo sapiens replication factor C
(activator 1) 3, 38kDa protein.
Length = 356
Score = 54.0 bits (124), Expect = 4e-07
Identities = 42/146 (28%), Positives = 69/146 (47%), Gaps = 28/146 (19%)
Frame = +3
Query: 162 WIEKYRPQTFDDIVGNEDTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTILCLARALLGVS 341
W++KYRP + + +++ ++L + G+ P++++ GP G GK T I+C+ R L GV
Sbjct: 4 WVDKYRPCSLGRLDYHKEQAAQLRNLVQCGDFPHLLVYGPSGAGKKTRIMCILRELYGVG 63
Query: 342 FK------------------------DAVLELNASNDRGID--VVRNKIKMFA--QQKVT 437
+ + LE+N S+ D V++ +K A QQ T
Sbjct: 64 VEKLRIEHQTITTPSKKKIEISTIASNYHLEVNPSDAGNSDRVVIQEMLKTVAQSQQLET 123
Query: 438 LPPGRHKIVILDEADSMTDGAQQALR 515
K+V+L E D +T AQ ALR
Sbjct: 124 NSQRDFKVVLLTEVDKLTKDAQHALR 149
>AL139081-1|CAH70947.1| 356|Homo sapiens replication factor C
(activator 1) 3, 38kDa protein.
Length = 356
Score = 54.0 bits (124), Expect = 4e-07
Identities = 42/146 (28%), Positives = 69/146 (47%), Gaps = 28/146 (19%)
Frame = +3
Query: 162 WIEKYRPQTFDDIVGNEDTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTILCLARALLGVS 341
W++KYRP + + +++ ++L + G+ P++++ GP G GK T I+C+ R L GV
Sbjct: 4 WVDKYRPCSLGRLDYHKEQAAQLRNLVQCGDFPHLLVYGPSGAGKKTRIMCILRELYGVG 63
Query: 342 FK------------------------DAVLELNASNDRGID--VVRNKIKMFA--QQKVT 437
+ + LE+N S+ D V++ +K A QQ T
Sbjct: 64 VEKLRIEHQTITTPSKKKIEISTIASNYHLEVNPSDAGNSDRVVIQEMLKTVAQSQQLET 123
Query: 438 LPPGRHKIVILDEADSMTDGAQQALR 515
K+V+L E D +T AQ ALR
Sbjct: 124 NSQRDFKVVLLTEVDKLTKDAQHALR 149
>AK222572-1|BAD96292.1| 356|Homo sapiens replication factor C 3
isoform 1 variant protein.
Length = 356
Score = 54.0 bits (124), Expect = 4e-07
Identities = 42/146 (28%), Positives = 69/146 (47%), Gaps = 28/146 (19%)
Frame = +3
Query: 162 WIEKYRPQTFDDIVGNEDTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTILCLARALLGVS 341
W++KYRP + + +++ ++L + G+ P++++ GP G GK T I+C+ R L GV
Sbjct: 4 WVDKYRPCSLGRLDYHKEQAAQLRNLVQCGDFPHLLVYGPSGAGKKTRIMCILRELYGVG 63
Query: 342 FK------------------------DAVLELNASNDRGID--VVRNKIKMFA--QQKVT 437
+ + LE+N S+ D V++ +K A QQ T
Sbjct: 64 VEKLRIEHQTTTTPSKKKIEISTIASNYHLEVNPSDAGNSDRVVIQEMLKTVAQSQQLET 123
Query: 438 LPPGRHKIVILDEADSMTDGAQQALR 515
K+V+L E D +T AQ ALR
Sbjct: 124 NSQRDFKVVLLTEVDKLTKDAQHALR 149
>AF484446-1|AAL82505.1| 356|Homo sapiens replication factor C
(activator 1) 3 (38kD) protein.
Length = 356
Score = 54.0 bits (124), Expect = 4e-07
Identities = 42/146 (28%), Positives = 69/146 (47%), Gaps = 28/146 (19%)
Frame = +3
Query: 162 WIEKYRPQTFDDIVGNEDTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTILCLARALLGVS 341
W++KYRP + + +++ ++L + G+ P++++ GP G GK T I+C+ R L GV
Sbjct: 4 WVDKYRPCSLGRLDYHKEQAAQLRNLVQCGDFPHLLVYGPSGAGKKTRIMCILRELYGVG 63
Query: 342 FK------------------------DAVLELNASNDRGID--VVRNKIKMFA--QQKVT 437
+ + LE+N S+ D V++ +K A QQ T
Sbjct: 64 VEKLRIEHQTITTPSKKKIEISTIASNYHLEVNPSDAGNSDRVVIQEMLKTVAQSQQLET 123
Query: 438 LPPGRHKIVILDEADSMTDGAQQALR 515
K+V+L E D +T AQ ALR
Sbjct: 124 NSQRDFKVVLLTEVDKLTKDAQHALR 149
>BC018184-1|AAH18184.1| 975|Homo sapiens CTF18, chromosome
transmission fidelity factor 18 homolog (S. cerevisiae)
protein.
Length = 975
Score = 46.4 bits (105), Expect = 7e-05
Identities = 28/73 (38%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Frame = +3
Query: 267 IIAGPPGVGKTTTILCLARALLGVSFKDAVLELNASNDRGIDVVRNKIKMFAQQKVTL-P 443
++ GPPG+GKTT +AR G S V+E+NAS+DR +V R +I+ Q + L
Sbjct: 371 LLCGPPGLGKTTLAHVIARHA-GYS----VVEMNASDDRSPEVFRTRIEAATQMESVLGA 425
Query: 444 PGRHKIVILDEAD 482
G+ +++DE D
Sbjct: 426 GGKPNCLVIDEID 438
>BC006437-1|AAH06437.1| 1016|Homo sapiens CHTF18 protein protein.
Length = 1016
Score = 46.4 bits (105), Expect = 7e-05
Identities = 28/73 (38%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Frame = +3
Query: 267 IIAGPPGVGKTTTILCLARALLGVSFKDAVLELNASNDRGIDVVRNKIKMFAQQKVTL-P 443
++ GPPG+GKTT +AR G S V+E+NAS+DR +V R +I+ Q + L
Sbjct: 412 LLCGPPGLGKTTLAHVIARHA-GYS----VVEMNASDDRSPEVFRTRIEAATQMESVLGA 466
Query: 444 PGRHKIVILDEAD 482
G+ +++DE D
Sbjct: 467 GGKPNCLVIDEID 479
>BC006278-1|AAH06278.2| 975|Homo sapiens CTF18, chromosome
transmission fidelity factor 18 homolog (S. cerevisiae)
protein.
Length = 975
Score = 46.4 bits (105), Expect = 7e-05
Identities = 28/73 (38%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Frame = +3
Query: 267 IIAGPPGVGKTTTILCLARALLGVSFKDAVLELNASNDRGIDVVRNKIKMFAQQKVTL-P 443
++ GPPG+GKTT +AR G S V+E+NAS+DR +V R +I+ Q + L
Sbjct: 371 LLCGPPGLGKTTLAHVIARHA-GYS----VVEMNASDDRSPEVFRTRIEAATQMESVLGA 425
Query: 444 PGRHKIVILDEAD 482
G+ +++DE D
Sbjct: 426 GGKPNCLVIDEID 438
>AL031033-2|CAB53056.1| 260|Homo sapiens protein ( Human DNA
sequence from clone LA16c-321D2 on chromosome 16
Contains a gene for a Ribosomal Large Subunit
Pseudouridine Synthase (EC ).
Length = 260
Score = 46.4 bits (105), Expect = 7e-05
Identities = 28/73 (38%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Frame = +3
Query: 267 IIAGPPGVGKTTTILCLARALLGVSFKDAVLELNASNDRGIDVVRNKIKMFAQQKVTL-P 443
++ GPPG+GKTT +AR G S V+E+NAS+DR +V R +I+ Q + L
Sbjct: 93 LLCGPPGLGKTTLAHVIARHA-GYS----VVEMNASDDRSPEVFRTRIEAATQMESVLGA 147
Query: 444 PGRHKIVILDEAD 482
G+ +++DE D
Sbjct: 148 GGKPNCLVIDEID 160
>AE006465-2|AAK61256.1| 1184|Homo sapiens some homology with
holliday junction DNA helicase RUVB like protein.
Length = 1184
Score = 46.4 bits (105), Expect = 7e-05
Identities = 28/73 (38%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Frame = +3
Query: 267 IIAGPPGVGKTTTILCLARALLGVSFKDAVLELNASNDRGIDVVRNKIKMFAQQKVTL-P 443
++ GPPG+GKTT +AR G S V+E+NAS+DR +V R +I+ Q + L
Sbjct: 566 LLCGPPGLGKTTLAHVIARHA-GYS----VVEMNASDDRSPEVFRTRIEAATQMESVLGA 620
Query: 444 PGRHKIVILDEAD 482
G+ +++DE D
Sbjct: 621 GGKPNCLVIDEID 633
>AL139092-4|CAH73665.1| 445|Homo sapiens Werner helicase
interacting protein 1 protein.
Length = 445
Score = 45.6 bits (103), Expect = 1e-04
Identities = 38/126 (30%), Positives = 55/126 (43%), Gaps = 5/126 (3%)
Frame = +3
Query: 159 PWIEKYRPQTFDDIVGNEDTVSR---LAVFAKTGNAPNIIIAGPPGVGKTTTILCLARAL 329
P + RP T D G V + L +T P++I+ GPPG GKTT LA +
Sbjct: 6 PLADTMRPDTLQDYFGQSKAVGQDTLLRSLLETNEIPSLILWGPPGCGKTT----LAHII 61
Query: 330 LGVSFKDAV--LELNASNDRGIDVVRNKIKMFAQQKVTLPPGRHKIVILDEADSMTDGAQ 503
S K ++ + L+A+N + D VR+ IK +K R I+ +DE Q
Sbjct: 62 ASNSKKHSIRFVTLSATNAKTND-VRDVIKQAQNEKSFFK--RKTILFIDEIHRFNKSQQ 118
Query: 504 QALRTH 521
H
Sbjct: 119 DTFLPH 124
>AL139092-3|CAH73664.1| 665|Homo sapiens Werner helicase
interacting protein 1 protein.
Length = 665
Score = 45.6 bits (103), Expect = 1e-04
Identities = 38/126 (30%), Positives = 55/126 (43%), Gaps = 5/126 (3%)
Frame = +3
Query: 159 PWIEKYRPQTFDDIVGNEDTVSR---LAVFAKTGNAPNIIIAGPPGVGKTTTILCLARAL 329
P + RP T D G V + L +T P++I+ GPPG GKTT LA +
Sbjct: 226 PLADTMRPDTLQDYFGQSKAVGQDTLLRSLLETNEIPSLILWGPPGCGKTT----LAHII 281
Query: 330 LGVSFKDAV--LELNASNDRGIDVVRNKIKMFAQQKVTLPPGRHKIVILDEADSMTDGAQ 503
S K ++ + L+A+N + D VR+ IK +K R I+ +DE Q
Sbjct: 282 ASNSKKHSIRFVTLSATNAKTND-VRDVIKQAQNEKSFFK--RKTILFIDEIHRFNKSQQ 338
Query: 504 QALRTH 521
H
Sbjct: 339 DTFLPH 344
>AK223593-1|BAD97313.1| 665|Homo sapiens Werner helicase
interacting protein isoform 1 variant protein.
Length = 665
Score = 45.6 bits (103), Expect = 1e-04
Identities = 38/126 (30%), Positives = 55/126 (43%), Gaps = 5/126 (3%)
Frame = +3
Query: 159 PWIEKYRPQTFDDIVGNEDTVSR---LAVFAKTGNAPNIIIAGPPGVGKTTTILCLARAL 329
P + RP T D G V + L +T P++I+ GPPG GKTT LA +
Sbjct: 226 PLADTMRPDTLQDYFGQSKAVGQDTLLRSLLETNEIPSLILWGPPGCGKTT----LAHII 281
Query: 330 LGVSFKDAV--LELNASNDRGIDVVRNKIKMFAQQKVTLPPGRHKIVILDEADSMTDGAQ 503
S K ++ + L+A+N + D VR+ IK +K R I+ +DE Q
Sbjct: 282 ASNSKKHSIRFVTLSATNAKTND-VRDVIKQAQNEKSFFK--RKTILFIDEIHRFNKSQQ 338
Query: 504 QALRTH 521
H
Sbjct: 339 DTFLPH 344
>AF218313-1|AAF80563.1| 445|Homo sapiens putative helicase RUVBL
protein.
Length = 445
Score = 45.6 bits (103), Expect = 1e-04
Identities = 38/126 (30%), Positives = 55/126 (43%), Gaps = 5/126 (3%)
Frame = +3
Query: 159 PWIEKYRPQTFDDIVGNEDTVSR---LAVFAKTGNAPNIIIAGPPGVGKTTTILCLARAL 329
P + RP T D G V + L +T P++I+ GPPG GKTT LA +
Sbjct: 6 PLADTMRPDTLQDYFGQSKAVGQDTLLRSLLETNEIPSLILWGPPGCGKTT----LAHII 61
Query: 330 LGVSFKDAV--LELNASNDRGIDVVRNKIKMFAQQKVTLPPGRHKIVILDEADSMTDGAQ 503
S K ++ + L+A+N + D VR+ IK +K R I+ +DE Q
Sbjct: 62 ASNSKKHSIRFVTLSATNAKTND-VRDVIKQAQNEKSFFK--RKTILFIDEIHRFNKSQQ 118
Query: 504 QALRTH 521
H
Sbjct: 119 DTFLPH 124
>AB209723-1|BAD92960.1| 646|Homo sapiens Werner helicase
interacting protein isoform 1 variant protein.
Length = 646
Score = 45.6 bits (103), Expect = 1e-04
Identities = 38/126 (30%), Positives = 55/126 (43%), Gaps = 5/126 (3%)
Frame = +3
Query: 159 PWIEKYRPQTFDDIVGNEDTVSR---LAVFAKTGNAPNIIIAGPPGVGKTTTILCLARAL 329
P + RP T D G V + L +T P++I+ GPPG GKTT LA +
Sbjct: 207 PLADTMRPDTLQDYFGQSKAVGQDTLLRSLLETNEIPSLILWGPPGCGKTT----LAHII 262
Query: 330 LGVSFKDAV--LELNASNDRGIDVVRNKIKMFAQQKVTLPPGRHKIVILDEADSMTDGAQ 503
S K ++ + L+A+N + D VR+ IK +K R I+ +DE Q
Sbjct: 263 ASNSKKHSIRFVTLSATNAKTND-VRDVIKQAQNEKSFFK--RKTILFIDEIHRFNKSQQ 319
Query: 504 QALRTH 521
H
Sbjct: 320 DTFLPH 325
>BC018923-1|AAH18923.1| 640|Homo sapiens Werner helicase
interacting protein 1 protein.
Length = 640
Score = 43.6 bits (98), Expect = 5e-04
Identities = 36/111 (32%), Positives = 53/111 (47%), Gaps = 5/111 (4%)
Frame = +3
Query: 159 PWIEKYRPQTFDDIVGNEDTVSR---LAVFAKTGNAPNIIIAGPPGVGKTTTILCLARAL 329
P + RP T D G V + L +T P++I+ GPPG GKTT LA +
Sbjct: 226 PLADTMRPDTLQDYFGQSKAVGQDTLLRSLLETNEIPSLILWGPPGCGKTT----LAHII 281
Query: 330 LGVSFKDAV--LELNASNDRGIDVVRNKIKMFAQQKVTLPPGRHKIVILDE 476
S K ++ + L+A+N + D VR+ IK +K R I+ +DE
Sbjct: 282 ASNSKKHSIRFVTLSATNAKTND-VRDVIKQAQNEKSFFK--RKTILFIDE 329
>AL139092-2|CAH73663.1| 640|Homo sapiens Werner helicase
interacting protein 1 protein.
Length = 640
Score = 43.6 bits (98), Expect = 5e-04
Identities = 36/111 (32%), Positives = 53/111 (47%), Gaps = 5/111 (4%)
Frame = +3
Query: 159 PWIEKYRPQTFDDIVGNEDTVSR---LAVFAKTGNAPNIIIAGPPGVGKTTTILCLARAL 329
P + RP T D G V + L +T P++I+ GPPG GKTT LA +
Sbjct: 226 PLADTMRPDTLQDYFGQSKAVGQDTLLRSLLETNEIPSLILWGPPGCGKTT----LAHII 281
Query: 330 LGVSFKDAV--LELNASNDRGIDVVRNKIKMFAQQKVTLPPGRHKIVILDE 476
S K ++ + L+A+N + D VR+ IK +K R I+ +DE
Sbjct: 282 ASNSKKHSIRFVTLSATNAKTND-VRDVIKQAQNEKSFFK--RKTILFIDE 329
>BX537441-1|CAD97683.1| 670|Homo sapiens hypothetical protein
protein.
Length = 670
Score = 43.2 bits (97), Expect = 7e-04
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 8/67 (11%)
Frame = +3
Query: 147 STNLPWIEKYRPQTFDDIVGNEDTVSRLAVFAKTG---NAPN-----IIIAGPPGVGKTT 302
S N PW++KY+P+T ++ ++ + + + K P ++I GPPG GKTT
Sbjct: 75 SENEPWVDKYKPETQHELAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTT 134
Query: 303 TILCLAR 323
T+ L++
Sbjct: 135 TLKILSK 141
>BC032304-1|AAH32304.1| 670|Homo sapiens RAD17 homolog (S. pombe)
protein.
Length = 670
Score = 43.2 bits (97), Expect = 7e-04
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 8/67 (11%)
Frame = +3
Query: 147 STNLPWIEKYRPQTFDDIVGNEDTVSRLAVFAKTG---NAPN-----IIIAGPPGVGKTT 302
S N PW++KY+P+T ++ ++ + + + K P ++I GPPG GKTT
Sbjct: 75 SENEPWVDKYKPETQHELAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTT 134
Query: 303 TILCLAR 323
T+ L++
Sbjct: 135 TLKILSK 141
>AY612854-1|AAT09763.1| 670|Homo sapiens RAD17 homolog (S. pombe)
protein.
Length = 670
Score = 43.2 bits (97), Expect = 7e-04
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 8/67 (11%)
Frame = +3
Query: 147 STNLPWIEKYRPQTFDDIVGNEDTVSRLAVFAKTG---NAPN-----IIIAGPPGVGKTT 302
S N PW++KY+P+T ++ ++ + + + K P ++I GPPG GKTT
Sbjct: 75 SENEPWVDKYKPETQHELAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTT 134
Query: 303 TILCLAR 323
T+ L++
Sbjct: 135 TLKILSK 141
>AJ131296-1|CAB46364.1| 670|Homo sapiens HRAD17 protein protein.
Length = 670
Score = 43.2 bits (97), Expect = 7e-04
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 8/67 (11%)
Frame = +3
Query: 147 STNLPWIEKYRPQTFDDIVGNEDTVSRLAVFAKTG---NAPN-----IIIAGPPGVGKTT 302
S N PW++KY+P+T ++ ++ + + + K P ++I GPPG GKTT
Sbjct: 75 SENEPWVDKYKPETQHELAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTT 134
Query: 303 TILCLAR 323
T+ L++
Sbjct: 135 TLKILSK 141
>AJ004977-1|CAA06251.1| 670|Homo sapiens cell cycle checkpoint
protein protein.
Length = 670
Score = 43.2 bits (97), Expect = 7e-04
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 8/67 (11%)
Frame = +3
Query: 147 STNLPWIEKYRPQTFDDIVGNEDTVSRLAVFAKTG---NAPN-----IIIAGPPGVGKTT 302
S N PW++KY+P+T ++ ++ + + + K P ++I GPPG GKTT
Sbjct: 75 SENEPWVDKYKPETQHELAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTT 134
Query: 303 TILCLAR 323
T+ L++
Sbjct: 135 TLKILSK 141
>AJ001642-1|CAA04894.1| 670|Homo sapiens cell cycle checkpoint
protein protein.
Length = 670
Score = 43.2 bits (97), Expect = 7e-04
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 8/67 (11%)
Frame = +3
Query: 147 STNLPWIEKYRPQTFDDIVGNEDTVSRLAVFAKTG---NAPN-----IIIAGPPGVGKTT 302
S N PW++KY+P+T ++ ++ + + + K P ++I GPPG GKTT
Sbjct: 75 SENEPWVDKYKPETQHELAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTT 134
Query: 303 TILCLAR 323
T+ L++
Sbjct: 135 TLKILSK 141
>AF126424-1|AAD17334.1| 670|Homo sapiens cell cycle checkpoint
protein protein.
Length = 670
Score = 43.2 bits (97), Expect = 7e-04
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 8/67 (11%)
Frame = +3
Query: 147 STNLPWIEKYRPQTFDDIVGNEDTVSRLAVFAKTG---NAPN-----IIIAGPPGVGKTT 302
S N PW++KY+P+T ++ ++ + + + K P ++I GPPG GKTT
Sbjct: 75 SENEPWVDKYKPETQHELAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTT 134
Query: 303 TILCLAR 323
T+ L++
Sbjct: 135 TLKILSK 141
>AF112263-1|AAD38878.1| 670|Homo sapiens hRad17 protein protein.
Length = 670
Score = 43.2 bits (97), Expect = 7e-04
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 8/67 (11%)
Frame = +3
Query: 147 STNLPWIEKYRPQTFDDIVGNEDTVSRLAVFAKTG---NAPN-----IIIAGPPGVGKTT 302
S N PW++KY+P+T ++ ++ + + + K P ++I GPPG GKTT
Sbjct: 75 SENEPWVDKYKPETQHELAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTT 134
Query: 303 TILCLAR 323
T+ L++
Sbjct: 135 TLKILSK 141
>AF085736-1|AAC36334.1| 681|Homo sapiens RF-C/activator 1 homolog
protein.
Length = 681
Score = 43.2 bits (97), Expect = 7e-04
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 8/67 (11%)
Frame = +3
Query: 147 STNLPWIEKYRPQTFDDIVGNEDTVSRLAVFAKTG---NAPN-----IIIAGPPGVGKTT 302
S N PW++KY+P+T ++ ++ + + + K P ++I GPPG GKTT
Sbjct: 86 SENEPWVDKYKPETQHELAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTT 145
Query: 303 TILCLAR 323
T+ L++
Sbjct: 146 TLKILSK 152
>AF076838-1|AAC95520.1| 670|Homo sapiens Rad17-like protein
protein.
Length = 670
Score = 43.2 bits (97), Expect = 7e-04
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 8/67 (11%)
Frame = +3
Query: 147 STNLPWIEKYRPQTFDDIVGNEDTVSRLAVFAKTG---NAPN-----IIIAGPPGVGKTT 302
S N PW++KY+P+T ++ ++ + + + K P ++I GPPG GKTT
Sbjct: 75 SENEPWVDKYKPETQHELAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTT 134
Query: 303 TILCLAR 323
T+ L++
Sbjct: 135 TLKILSK 141
>AF017748-1|AAD01620.1| 670|Homo sapiens cell cycle checkpoint
protein RAD17 protein.
Length = 670
Score = 43.2 bits (97), Expect = 7e-04
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 8/67 (11%)
Frame = +3
Query: 147 STNLPWIEKYRPQTFDDIVGNEDTVSRLAVFAKTG---NAPN-----IIIAGPPGVGKTT 302
S N PW++KY+P+T ++ ++ + + + K P ++I GPPG GKTT
Sbjct: 75 SENEPWVDKYKPETQHELAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTT 134
Query: 303 TILCLAR 323
T+ L++
Sbjct: 135 TLKILSK 141
>AB056152-1|BAB60709.1| 665|Homo sapiens Werner helicase
interacting protein protein.
Length = 665
Score = 42.7 bits (96), Expect = 0.001
Identities = 37/126 (29%), Positives = 54/126 (42%), Gaps = 5/126 (3%)
Frame = +3
Query: 159 PWIEKYRPQTFDDIVGNEDTVSR---LAVFAKTGNAPNIIIAGPPGVGKTTTILCLARAL 329
P + RP T D G V + L +T P++ + GPPG GKTT LA +
Sbjct: 226 PLADTMRPDTLQDYFGQSKAVGQDTLLRSLLETNEIPSLNLWGPPGCGKTT----LAHII 281
Query: 330 LGVSFKDAV--LELNASNDRGIDVVRNKIKMFAQQKVTLPPGRHKIVILDEADSMTDGAQ 503
S K ++ + L+A+N + D VR+ IK +K R I+ +DE Q
Sbjct: 282 ASNSKKHSIRFVTLSATNAKTND-VRDVIKQAQNEKSFFK--RKTILFIDEIHRFNKSQQ 338
Query: 504 QALRTH 521
H
Sbjct: 339 DTFLPH 344
>BC051751-1|AAH51751.1| 1147|Homo sapiens replication factor C
(activator 1) 1, 145kDa protein.
Length = 1147
Score = 35.1 bits (77), Expect = 0.18
Identities = 33/109 (30%), Positives = 50/109 (45%), Gaps = 26/109 (23%)
Frame = +3
Query: 135 SSSKSTNLPWIEKYRPQTFDDIVGNEDTVS--------------------RLAVFAKTGN 254
S +K NL W++KY+P + I+G + S + A F K
Sbjct: 577 SENKVENLLWVDKYKPTSLKTIIGQQGDQSCANKLLRWLRNWQKSSSEDKKHAKFGKFSG 636
Query: 255 APN------IIIAGPPGVGKTTTILCLARALLGVSFKDAVLELNASNDR 383
+ +++GPPGVGKTTT + + LG S+ +ELNAS+ R
Sbjct: 637 KDDGSSFKAALLSGPPGVGKTTTASLVCQE-LGYSY----VELNASDTR 680
>AY600371-1|AAS94325.1| 1147|Homo sapiens replication factor C
(activator 1) 1, 145kDa protein.
Length = 1147
Score = 35.1 bits (77), Expect = 0.18
Identities = 33/109 (30%), Positives = 50/109 (45%), Gaps = 26/109 (23%)
Frame = +3
Query: 135 SSSKSTNLPWIEKYRPQTFDDIVGNEDTVS--------------------RLAVFAKTGN 254
S +K NL W++KY+P + I+G + S + A F K
Sbjct: 577 SENKVENLLWVDKYKPTSLKTIIGQQGDQSCANKLLRWLRNWQKSSSEDKKHAKFGKFSG 636
Query: 255 APN------IIIAGPPGVGKTTTILCLARALLGVSFKDAVLELNASNDR 383
+ +++GPPGVGKTTT + + LG S+ +ELNAS+ R
Sbjct: 637 KDDGSSFKAALLSGPPGVGKTTTASLVCQE-LGYSY----VELNASDTR 680
>AY557611-1|AAT52049.1| 1844|Homo sapiens chromosome fragility
associated gene 1 protein.
Length = 1844
Score = 35.1 bits (77), Expect = 0.18
Identities = 16/43 (37%), Positives = 27/43 (62%), Gaps = 3/43 (6%)
Frame = +3
Query: 126 VKPSSSKST---NLPWIEKYRPQTFDDIVGNEDTVSRLAVFAK 245
+K SSK + ++ W EKY+PQT +++GNE + +L + K
Sbjct: 1039 IKLDSSKDSGTEDMLWTEKYQPQTASELIGNELAIKKLHSWLK 1081
Score = 32.7 bits (71), Expect = 0.97
Identities = 19/54 (35%), Positives = 30/54 (55%)
Frame = +3
Query: 264 IIIAGPPGVGKTTTILCLARALLGVSFKDAVLELNASNDRGIDVVRNKIKMFAQ 425
++I GP GVGKT + A+ L FK + E+NAS+ R + +++K Q
Sbjct: 1128 VLITGPTGVGKTAAVYACAQEL---GFK--IFEVNASSQRSGRQILSQLKEATQ 1176
>AK022797-1|BAB14248.1| 801|Homo sapiens protein ( Homo sapiens
cDNA FLJ12735 fis, clone NT2RP2000258, weakly similar to
ACTIVATOR 1 140 KD SUBUNIT. ).
Length = 801
Score = 35.1 bits (77), Expect = 0.18
Identities = 16/43 (37%), Positives = 27/43 (62%), Gaps = 3/43 (6%)
Frame = +3
Query: 126 VKPSSSKST---NLPWIEKYRPQTFDDIVGNEDTVSRLAVFAK 245
+K SSK + ++ W EKY+PQT +++GNE + +L + K
Sbjct: 636 IKLDSSKDSGTEDMLWTEKYQPQTASELIGNELAIKKLHSWLK 678
Score = 32.7 bits (71), Expect = 0.97
Identities = 19/54 (35%), Positives = 30/54 (55%)
Frame = +3
Query: 264 IIIAGPPGVGKTTTILCLARALLGVSFKDAVLELNASNDRGIDVVRNKIKMFAQ 425
++I GP GVGKT + A+ L FK + E+NAS+ R + +++K Q
Sbjct: 725 VLITGPTGVGKTAAVYACAQEL---GFK--IFEVNASSQRSGRQILSQLKEATQ 773
>AJ314648-1|CAC44537.2| 1844|Homo sapiens ATP(GTP)-binding protein
protein.
Length = 1844
Score = 35.1 bits (77), Expect = 0.18
Identities = 16/43 (37%), Positives = 27/43 (62%), Gaps = 3/43 (6%)
Frame = +3
Query: 126 VKPSSSKST---NLPWIEKYRPQTFDDIVGNEDTVSRLAVFAK 245
+K SSK + ++ W EKY+PQT +++GNE + +L + K
Sbjct: 1039 IKLDSSKDSGTEDMLWTEKYQPQTASELIGNELAIKKLHSWLK 1081
Score = 32.7 bits (71), Expect = 0.97
Identities = 19/54 (35%), Positives = 30/54 (55%)
Frame = +3
Query: 264 IIIAGPPGVGKTTTILCLARALLGVSFKDAVLELNASNDRGIDVVRNKIKMFAQ 425
++I GP GVGKT + A+ L FK + E+NAS+ R + +++K Q
Sbjct: 1128 VLITGPTGVGKTAAVYACAQEL---GFK--IFEVNASSQRSGRQILSQLKEATQ 1176
>L23320-1|AAA16121.1| 1148|Homo sapiens replication factor C large
subunit protein.
Length = 1148
Score = 34.3 bits (75), Expect = 0.32
Identities = 19/39 (48%), Positives = 27/39 (69%)
Frame = +3
Query: 267 IIAGPPGVGKTTTILCLARALLGVSFKDAVLELNASNDR 383
+++GPPGVGKTTT + + LG S+ +ELNAS+ R
Sbjct: 648 LLSGPPGVGKTTTASLVCQE-LGYSY----VELNASDTR 681
Score = 29.9 bits (64), Expect = 6.8
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +3
Query: 135 SSSKSTNLPWIEKYRPQTFDDIVGNE 212
S +K NL W++KY+P + I+G +
Sbjct: 577 SENKVENLLWVDKYKPTSLKTIIGQQ 602
>BC051786-1|AAH51786.1| 1148|Homo sapiens RFC1 protein protein.
Length = 1148
Score = 34.3 bits (75), Expect = 0.32
Identities = 19/39 (48%), Positives = 27/39 (69%)
Frame = +3
Query: 267 IIAGPPGVGKTTTILCLARALLGVSFKDAVLELNASNDR 383
+++GPPGVGKTTT + + LG S+ +ELNAS+ R
Sbjct: 648 LLSGPPGVGKTTTASLVCQE-LGYSY----VELNASDTR 681
Score = 29.9 bits (64), Expect = 6.8
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +3
Query: 135 SSSKSTNLPWIEKYRPQTFDDIVGNE 212
S +K NL W++KY+P + I+G +
Sbjct: 577 SENKVENLLWVDKYKPTSLKTIIGQQ 602
>BC035297-1|AAH35297.1| 1148|Homo sapiens replication factor C
(activator 1) 1, 145kDa protein.
Length = 1148
Score = 34.3 bits (75), Expect = 0.32
Identities = 19/39 (48%), Positives = 27/39 (69%)
Frame = +3
Query: 267 IIAGPPGVGKTTTILCLARALLGVSFKDAVLELNASNDR 383
+++GPPGVGKTTT + + LG S+ +ELNAS+ R
Sbjct: 648 LLSGPPGVGKTTTASLVCQE-LGYSY----VELNASDTR 681
Score = 29.9 bits (64), Expect = 6.8
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +3
Query: 135 SSSKSTNLPWIEKYRPQTFDDIVGNE 212
S +K NL W++KY+P + I+G +
Sbjct: 577 SENKVENLLWVDKYKPTSLKTIIGQQ 602
>Z22642-1|CAA80355.1| 1147|Homo sapiens PO-GA protein.
Length = 1147
Score = 33.5 bits (73), Expect = 0.56
Identities = 33/109 (30%), Positives = 51/109 (46%), Gaps = 26/109 (23%)
Frame = +3
Query: 135 SSSKSTNLPWIEKYRPQTFDDIVGNEDTVS--------------------RLAVFAK-TG 251
S +K NL W++KY+P + I+G + S + + F K +G
Sbjct: 577 SENKVENLLWVDKYKPTSLKTIIGQQGDQSCANKLLLWLRNWQKSSSEDKKHSKFGKFSG 636
Query: 252 NAPN-----IIIAGPPGVGKTTTILCLARALLGVSFKDAVLELNASNDR 383
N +++GPPGVGKTTT + + LG S+ +ELN S+ R
Sbjct: 637 KDDNSSFKAALLSGPPGVGKTTTASLVCQE-LGYSY----VELNRSDTR 680
>AY072792-1|AAL68396.1| 994|Homo sapiens PAAD and NACHT-containing
protein 2 protein.
Length = 994
Score = 33.5 bits (73), Expect = 0.56
Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
Frame = +3
Query: 189 FDDIVGNE--DTVSRLAVFAKTGNAPN-IIIAGPPGVGKTTTILCLARA 326
F++ V E D + RL +TG P +II GP G+GKTT ++ L A
Sbjct: 123 FEEEVKQEECDHLDRLFAPKETGKQPRTVIIQGPQGIGKTTLLMKLMMA 171
>AK056688-1|BAB71254.1| 919|Homo sapiens protein ( Homo sapiens
cDNA FLJ32126 fis, clone PEBLM2000112, weakly similar to
Homo sapiens nucleotide-binding site protein 1 mRNA. ).
Length = 919
Score = 33.5 bits (73), Expect = 0.56
Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
Frame = +3
Query: 189 FDDIVGNE--DTVSRLAVFAKTGNAPN-IIIAGPPGVGKTTTILCLARA 326
F++ V E D + RL +TG P +II GP G+GKTT ++ L A
Sbjct: 48 FEEEVKQEECDHLDRLFAPKETGKQPRTVIIQGPQGIGKTTLLMKLMMA 96
>AF482706-1|AAL88672.1| 916|Homo sapiens ribonuclease inhibitor 2
protein.
Length = 916
Score = 33.5 bits (73), Expect = 0.56
Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
Frame = +3
Query: 189 FDDIVGNE--DTVSRLAVFAKTGNAPN-IIIAGPPGVGKTTTILCLARA 326
F++ V E D + RL +TG P +II GP G+GKTT ++ L A
Sbjct: 45 FEEEVKQEECDHLDRLFAPKETGKQPRTVIIQGPQGIGKTTLLMKLMMA 93
>AF479747-1|AAL87104.1| 994|Homo sapiens PYRIN-containing
APAF1-like protein 4 protein.
Length = 994
Score = 33.5 bits (73), Expect = 0.56
Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
Frame = +3
Query: 189 FDDIVGNE--DTVSRLAVFAKTGNAPN-IIIAGPPGVGKTTTILCLARA 326
F++ V E D + RL +TG P +II GP G+GKTT ++ L A
Sbjct: 123 FEEEVKQEECDHLDRLFAPKETGKQPRTVIIQGPQGIGKTTLLMKLMMA 171
>AF442488-1|AAL35293.1| 994|Homo sapiens NALP4 protein.
Length = 994
Score = 33.5 bits (73), Expect = 0.56
Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
Frame = +3
Query: 189 FDDIVGNE--DTVSRLAVFAKTGNAPN-IIIAGPPGVGKTTTILCLARA 326
F++ V E D + RL +TG P +II GP G+GKTT ++ L A
Sbjct: 123 FEEEVKQEECDHLDRLFAPKETGKQPRTVIIQGPQGIGKTTLLMKLMMA 171
>AF040250-1|AAB99788.1| 1147|Homo sapiens DNA binding protein
protein.
Length = 1147
Score = 33.5 bits (73), Expect = 0.56
Identities = 33/109 (30%), Positives = 51/109 (46%), Gaps = 26/109 (23%)
Frame = +3
Query: 135 SSSKSTNLPWIEKYRPQTFDDIVGNEDTVS--------------------RLAVFAK-TG 251
S +K NL W++KY+P + I+G + S + + F K +G
Sbjct: 577 SENKVENLLWVDKYKPTSLKTIIGQQGDQSCANKLLLWLRNWQKSSSEDKKHSKFGKFSG 636
Query: 252 NAPN-----IIIAGPPGVGKTTTILCLARALLGVSFKDAVLELNASNDR 383
N +++GPPGVGKTTT + + LG S+ +ELN S+ R
Sbjct: 637 KDDNSSFKAALLSGPPGVGKTTTASLVCQE-LGYSY----VELNRSDTR 680
>AY682080-1|AAT74625.1| 4646|Homo sapiens dynein, cytoplasmic, heavy
polypeptide 1 protein.
Length = 4646
Score = 32.7 bits (71), Expect = 0.97
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = +3
Query: 165 IEKYRPQTFDDIVGNEDTVSRLAV-FAKTGNAPNIIIAGPPGVGKTTTILCLARAL 329
+E ++ D +V DTV A+ + +++ GPPG GKT T+ RAL
Sbjct: 2557 VETHKVAAPDVVVPTLDTVRHEALLYTWLAEHKPLVLCGPPGSGKTMTLFSALRAL 2612
>AB002323-1|BAA20783.3| 4658|Homo sapiens KIAA0325 protein protein.
Length = 4658
Score = 32.7 bits (71), Expect = 0.97
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = +3
Query: 165 IEKYRPQTFDDIVGNEDTVSRLAV-FAKTGNAPNIIIAGPPGVGKTTTILCLARAL 329
+E ++ D +V DTV A+ + +++ GPPG GKT T+ RAL
Sbjct: 2569 VETHKVAAPDVVVPTLDTVRHEALLYTWLAEHKPLVLCGPPGSGKTMTLFSALRAL 2624
>X76040-1|CAA53625.1| 937|Homo sapiens Lon protease-like protein
protein.
Length = 937
Score = 32.3 bits (70), Expect = 1.3
Identities = 33/116 (28%), Positives = 49/116 (42%), Gaps = 12/116 (10%)
Frame = +3
Query: 192 DDIVGNEDTVSRL----AVFAKTGNAPNIIIA--GPPGVGKTTTILCLARAL------LG 335
+D G ED R+ AV G+ I+ GPPGVGKT+ +ARAL
Sbjct: 467 EDHYGMEDVKKRILEFIAVSQLRGSTQGKILCFYGPPGVGKTSIARSIARALNREYFRFS 526
Query: 336 VSFKDAVLELNASNDRGIDVVRNKIKMFAQQKVTLPPGRHKIVILDEADSMTDGAQ 503
V V E+ + + KI ++ T P ++++DE D + G Q
Sbjct: 527 VGGMTDVAEIKGHRRTYVGAMPGKIIQCLKKTKTENP----LILIDEVDKIGRGYQ 578
>X74215-1|CAA52291.1| 845|Homo sapiens Lon protease-like protein
protein.
Length = 845
Score = 32.3 bits (70), Expect = 1.3
Identities = 33/116 (28%), Positives = 49/116 (42%), Gaps = 12/116 (10%)
Frame = +3
Query: 192 DDIVGNEDTVSRL----AVFAKTGNAPNIIIA--GPPGVGKTTTILCLARAL------LG 335
+D G ED R+ AV G+ I+ GPPGVGKT+ +ARAL
Sbjct: 375 EDHYGMEDVKKRILEFIAVSQLRGSTQGKILCFYGPPGVGKTSIARSIARALNREYFRFS 434
Query: 336 VSFKDAVLELNASNDRGIDVVRNKIKMFAQQKVTLPPGRHKIVILDEADSMTDGAQ 503
V V E+ + + KI ++ T P ++++DE D + G Q
Sbjct: 435 VGGMTDVAEIKGHRRTYVGAMPGKIIQCLKKTKTENP----LILIDEVDKIGRGYQ 486
>U02389-1|AAA61616.1| 962|Homo sapiens hLON ATP-dependent protease
protein.
Length = 962
Score = 32.3 bits (70), Expect = 1.3
Identities = 33/116 (28%), Positives = 49/116 (42%), Gaps = 12/116 (10%)
Frame = +3
Query: 192 DDIVGNEDTVSRL----AVFAKTGNAPNIIIA--GPPGVGKTTTILCLARAL------LG 335
+D G ED R+ AV G+ I+ GPPGVGKT+ +ARAL
Sbjct: 492 EDHYGMEDVKKRILEFIAVSQLRGSTQGKILCFYGPPGVGKTSIARSIARALNREYFRFS 551
Query: 336 VSFKDAVLELNASNDRGIDVVRNKIKMFAQQKVTLPPGRHKIVILDEADSMTDGAQ 503
V V E+ + + KI ++ T P ++++DE D + G Q
Sbjct: 552 VGGMTDVTEIKGHRRTYVGAMPGKIIQCLKKTKTENP----LILIDEVDKIGRGYQ 603
>BC109218-1|AAI09219.1| 848|Homo sapiens LONP1 protein protein.
Length = 848
Score = 32.3 bits (70), Expect = 1.3
Identities = 33/116 (28%), Positives = 49/116 (42%), Gaps = 12/116 (10%)
Frame = +3
Query: 192 DDIVGNEDTVSRL----AVFAKTGNAPNIIIA--GPPGVGKTTTILCLARAL------LG 335
+D G ED R+ AV G+ I+ GPPGVGKT+ +ARAL
Sbjct: 378 EDHYGMEDVKKRILEFIAVSQLRGSTQGKILCFYGPPGVGKTSIARSIARALNREYFRFS 437
Query: 336 VSFKDAVLELNASNDRGIDVVRNKIKMFAQQKVTLPPGRHKIVILDEADSMTDGAQ 503
V V E+ + + KI ++ T P ++++DE D + G Q
Sbjct: 438 VGGMTDVAEIKGHRRTYVGAMPGKIIQCLKKTKTENP----LILIDEVDKIGRGYQ 489
>BC004934-1|AAH04934.1| 517|Homo sapiens Unknown (protein for
IMAGE:3606377) protein.
Length = 517
Score = 32.3 bits (70), Expect = 1.3
Identities = 33/116 (28%), Positives = 49/116 (42%), Gaps = 12/116 (10%)
Frame = +3
Query: 192 DDIVGNEDTVSRL----AVFAKTGNAPNIIIA--GPPGVGKTTTILCLARAL------LG 335
+D G ED R+ AV G+ I+ GPPGVGKT+ +ARAL
Sbjct: 47 EDHYGMEDVKKRILEFIAVSQLRGSTQGKILCFYGPPGVGKTSIARSIARALNREYFRFS 106
Query: 336 VSFKDAVLELNASNDRGIDVVRNKIKMFAQQKVTLPPGRHKIVILDEADSMTDGAQ 503
V V E+ + + KI ++ T P ++++DE D + G Q
Sbjct: 107 VGGMTDVAEIKGHRRTYVGAMPGKIIQCLKKTKTENP----LILIDEVDKIGRGYQ 158
>BC000235-1|AAH00235.1| 959|Homo sapiens lon peptidase 1,
mitochondrial protein.
Length = 959
Score = 32.3 bits (70), Expect = 1.3
Identities = 33/116 (28%), Positives = 49/116 (42%), Gaps = 12/116 (10%)
Frame = +3
Query: 192 DDIVGNEDTVSRL----AVFAKTGNAPNIIIA--GPPGVGKTTTILCLARAL------LG 335
+D G ED R+ AV G+ I+ GPPGVGKT+ +ARAL
Sbjct: 489 EDHYGMEDVKKRILEFIAVSQLRGSTQGKILCFYGPPGVGKTSIARSIARALNREYFRFS 548
Query: 336 VSFKDAVLELNASNDRGIDVVRNKIKMFAQQKVTLPPGRHKIVILDEADSMTDGAQ 503
V V E+ + + KI ++ T P ++++DE D + G Q
Sbjct: 549 VGGMTDVAEIKGHRRTYVGAMPGKIIQCLKKTKTENP----LILIDEVDKIGRGYQ 600
>AK096626-1|BAC04829.1| 895|Homo sapiens protein ( Homo sapiens
cDNA FLJ39307 fis, clone OCBBF2013208, highly similar to
MITOCHONDRIAL LON PROTEASE PRECURSOR (EC 3.4.21.-). ).
Length = 895
Score = 32.3 bits (70), Expect = 1.3
Identities = 33/116 (28%), Positives = 49/116 (42%), Gaps = 12/116 (10%)
Frame = +3
Query: 192 DDIVGNEDTVSRL----AVFAKTGNAPNIIIA--GPPGVGKTTTILCLARAL------LG 335
+D G ED R+ AV G+ I+ GPPGVGKT+ +ARAL
Sbjct: 425 EDHYGMEDVKKRILEFIAVSQLRGSTQGKILCFYGPPGVGKTSIARSIARALNREYFRFS 484
Query: 336 VSFKDAVLELNASNDRGIDVVRNKIKMFAQQKVTLPPGRHKIVILDEADSMTDGAQ 503
V V E+ + + KI ++ T P ++++DE D + G Q
Sbjct: 485 VGGMTDVAEIKGHRRTYVGAMPGKIIQCLKKTKTENP----LILIDEVDKIGRGYQ 536
>AF059309-1|AAD24414.1| 959|Homo sapiens LON protease protein.
Length = 959
Score = 32.3 bits (70), Expect = 1.3
Identities = 33/116 (28%), Positives = 49/116 (42%), Gaps = 12/116 (10%)
Frame = +3
Query: 192 DDIVGNEDTVSRL----AVFAKTGNAPNIIIA--GPPGVGKTTTILCLARAL------LG 335
+D G ED R+ AV G+ I+ GPPGVGKT+ +ARAL
Sbjct: 489 EDHYGMEDVKKRILEFIAVSQLRGSTQGKILCFYGPPGVGKTSIARSIARALNREYFRFS 548
Query: 336 VSFKDAVLELNASNDRGIDVVRNKIKMFAQQKVTLPPGRHKIVILDEADSMTDGAQ 503
V V E+ + + KI ++ T P ++++DE D + G Q
Sbjct: 549 VGGMTDVAEIKGHRRTYVGAMPGKIIQCLKKTKTENP----LILIDEVDKIGRGYQ 600
>L24544-1|AAA70430.1| 993|Homo sapiens DNA helicase protein.
Length = 993
Score = 31.5 bits (68), Expect = 2.2
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = +3
Query: 213 DTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTIL 311
DT + AV II GPPG GKTTT++
Sbjct: 193 DTSQKEAVLFALSQKELAIIHGPPGTGKTTTVV 225
>D42046-1|BAA07647.1| 1077|Homo sapiens KIAA0083 protein.
Length = 1077
Score = 31.5 bits (68), Expect = 2.2
Identities = 20/51 (39%), Positives = 26/51 (50%)
Frame = +3
Query: 267 IIAGPPGVGKTTTILCLARALLGVSFKDAVLELNASNDRGIDVVRNKIKMF 419
+I G PG GKTTTI L R L F +VL L + +D + K+ F
Sbjct: 662 LIVGMPGTGKTTTICTLVRILYACGF--SVL-LTSYTHSAVDNILLKLAKF 709
>BC053574-1|AAH53574.1| 494|Homo sapiens DNA2L protein protein.
Length = 494
Score = 31.5 bits (68), Expect = 2.2
Identities = 20/51 (39%), Positives = 26/51 (50%)
Frame = +3
Query: 267 IIAGPPGVGKTTTILCLARALLGVSFKDAVLELNASNDRGIDVVRNKIKMF 419
+I G PG GKTTTI L R L F +VL L + +D + K+ F
Sbjct: 79 LIVGMPGTGKTTTICTLVRILYACGF--SVL-LTSYTHSAVDNILLKLAKF 126
>BC050576-1|AAH50576.1| 479|Homo sapiens chromosome 9 open reading
frame 98 protein.
Length = 479
Score = 31.5 bits (68), Expect = 2.2
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +3
Query: 252 NAPNIIIAGPPGVGKTTTILCLARAL 329
N P I+I GPP GKTT + L + L
Sbjct: 56 NVPRIVILGPPASGKTTIAMWLCKHL 81
>BC050326-1|AAH50326.1| 994|Homo sapiens NLR family, pyrin domain
containing 4 protein.
Length = 994
Score = 31.5 bits (68), Expect = 2.2
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Frame = +3
Query: 189 FDDIVGNE--DTVSRLAVFAKTGNAPN-IIIAGPPGVGKTTTILCLARA 326
F++ V E D + RL + G P +II GP G+GKTT ++ L A
Sbjct: 123 FEEEVKQEECDHLDRLFAPKEAGKQPRTVIIQGPQGIGKTTLLMKLMMA 171
>BC041115-1|AAH41115.1| 435|Homo sapiens DNA2L protein protein.
Length = 435
Score = 31.5 bits (68), Expect = 2.2
Identities = 20/51 (39%), Positives = 26/51 (50%)
Frame = +3
Query: 267 IIAGPPGVGKTTTILCLARALLGVSFKDAVLELNASNDRGIDVVRNKIKMF 419
+I G PG GKTTTI L R L F +VL L + +D + K+ F
Sbjct: 20 LIVGMPGTGKTTTICTLVRILYACGF--SVL-LTSYTHSAVDNILLKLAKF 67
>BC034776-1|AAH34776.1| 479|Homo sapiens chromosome 9 open reading
frame 98 protein.
Length = 479
Score = 31.5 bits (68), Expect = 2.2
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +3
Query: 252 NAPNIIIAGPPGVGKTTTILCLARAL 329
N P I+I GPP GKTT + L + L
Sbjct: 56 NVPRIVILGPPASGKTTIAMWLCKHL 81
>BC025299-1|AAH25299.1| 868|Homo sapiens Unknown (protein for
IMAGE:4890919) protein.
Length = 868
Score = 31.5 bits (68), Expect = 2.2
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = +3
Query: 213 DTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTIL 311
DT + AV II GPPG GKTTT++
Sbjct: 193 DTSQKEAVLFALSQKELAIIHGPPGTGKTTTVV 225
>AY364261-1|AAQ76820.1| 310|Homo sapiens hypothetical protein
protein.
Length = 310
Score = 31.5 bits (68), Expect = 2.2
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +3
Query: 270 IAGPPGVGKTTTILCLARALLGVSFKDAVLELNASND 380
+ GPPG GKTT L ++ L + + AV+ L+ +N+
Sbjct: 14 VTGPPGSGKTTYCLGMSEFLRALGRRVAVVNLDPANE 50
>AL445645-1|CAH72109.1| 479|Homo sapiens chromosome 9 open reading
frame 98 protein.
Length = 479
Score = 31.5 bits (68), Expect = 2.2
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +3
Query: 252 NAPNIIIAGPPGVGKTTTILCLARAL 329
N P I+I GPP GKTT + L + L
Sbjct: 56 NVPRIVILGPPASGKTTIAMWLCKHL 81
>AL160165-5|CAH70535.1| 479|Homo sapiens chromosome 9 open reading
frame 98 protein.
Length = 479
Score = 31.5 bits (68), Expect = 2.2
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +3
Query: 252 NAPNIIIAGPPGVGKTTTILCLARAL 329
N P I+I GPP GKTT + L + L
Sbjct: 56 NVPRIVILGPPASGKTTIAMWLCKHL 81
>AL136233-5|CAI17238.1| 1040|Homo sapiens DNA2 DNA replication
helicase 2-like (yeast) protein.
Length = 1040
Score = 31.5 bits (68), Expect = 2.2
Identities = 20/51 (39%), Positives = 26/51 (50%)
Frame = +3
Query: 267 IIAGPPGVGKTTTILCLARALLGVSFKDAVLELNASNDRGIDVVRNKIKMF 419
+I G PG GKTTTI L R L F +VL L + +D + K+ F
Sbjct: 645 LIVGMPGTGKTTTICTLVRILYACGF--SVL-LTSYTHSAVDNILLKLAKF 692
>AK057266-1|BAB71402.1| 479|Homo sapiens protein ( Homo sapiens
cDNA FLJ32704 fis, clone TESTI2000591, weakly similar to
ADENYLATE KINASE, CHLOROPLAST (EC 2.7.4.3). ).
Length = 479
Score = 31.5 bits (68), Expect = 2.2
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +3
Query: 252 NAPNIIIAGPPGVGKTTTILCLARAL 329
N P I+I GPP GKTT + L + L
Sbjct: 56 NVPRIVILGPPASGKTTIAMWLCKHL 81
>AK022348-1|BAB14017.1| 392|Homo sapiens protein ( Homo sapiens
cDNA FLJ12286 fis, clone MAMMA1001768, weakly similar to
CELL DIVISION CYCLE PROTEIN 48 HOMOLOG MJ1156. ).
Length = 392
Score = 31.5 bits (68), Expect = 2.2
Identities = 22/75 (29%), Positives = 36/75 (48%)
Frame = +3
Query: 264 IIIAGPPGVGKTTTILCLARALLGVSFKDAVLELNASNDRGIDVVRNKIKMFAQQKVTLP 443
+++AGPPGVGKT + +AR G AV R + N ++F + +
Sbjct: 237 VLLAGPPGVGKTQLVQAVARG-AGAELL-AVSAPALQGSRPGETEENVRRVFQRARELAS 294
Query: 444 PGRHKIVILDEADSM 488
G ++ LDE D++
Sbjct: 295 RG-PSLLFLDEMDAL 308
>AK001211-1|BAA91556.1| 310|Homo sapiens protein ( Homo sapiens
cDNA FLJ10349 fis, clone NT2RM2001100. ).
Length = 310
Score = 31.5 bits (68), Expect = 2.2
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +3
Query: 270 IAGPPGVGKTTTILCLARALLGVSFKDAVLELNASND 380
+ GPPG GKTT L ++ L + + AV+ L+ +N+
Sbjct: 14 VTGPPGSGKTTYCLGMSEFLRALGRRVAVVNLDPANE 50
>BC008634-1|AAH08634.1| 310|Homo sapiens ATP binding domain 1
family, member B protein.
Length = 310
Score = 31.1 bits (67), Expect = 3.0
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +3
Query: 270 IAGPPGVGKTTTILCLARALLGVSFKDAVLELNASND 380
+ GPPG GKTT L ++ L + + AV+ L+ +N+
Sbjct: 14 VIGPPGSGKTTYCLGMSEFLRALGRRVAVVNLDPANE 50
>BC007815-1|AAH07815.1| 310|Homo sapiens ATP binding domain 1
family, member B protein.
Length = 310
Score = 31.1 bits (67), Expect = 3.0
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +3
Query: 270 IAGPPGVGKTTTILCLARALLGVSFKDAVLELNASND 380
+ GPPG GKTT L ++ L + + AV+ L+ +N+
Sbjct: 14 VIGPPGSGKTTYCLGMSEFLRALGRRVAVVNLDPANE 50
>BC000981-1|AAH00981.1| 753|Homo sapiens spermatogenesis associated
5-like 1 protein.
Length = 753
Score = 31.1 bits (67), Expect = 3.0
Identities = 22/75 (29%), Positives = 36/75 (48%)
Frame = +3
Query: 264 IIIAGPPGVGKTTTILCLARALLGVSFKDAVLELNASNDRGIDVVRNKIKMFAQQKVTLP 443
+++AGPPGVGKT + +AR G AV R + N ++F + +
Sbjct: 237 VLLAGPPGVGKTQLVQAVARE-AGAELL-AVSAPALQGSRPGETEENVRRVFQRARELAS 294
Query: 444 PGRHKIVILDEADSM 488
G ++ LDE D++
Sbjct: 295 RG-PSLLFLDEMDAL 308
Score = 29.5 bits (63), Expect = 9.1
Identities = 38/150 (25%), Positives = 67/150 (44%), Gaps = 17/150 (11%)
Frame = +3
Query: 120 KQVKPSSSKSTNLPWIEKYRPQTFDDIVGNEDTVSRLAV-----------FAKTG--NAP 260
K ++PSS +S + + +P +++I G ED +L F + G
Sbjct: 442 KNIQPSSFRS--VIGLMDIKPVDWEEIGGLEDVKLKLKQSIEWPLKFPWEFVRMGLTQPK 499
Query: 261 NIIIAGPPGVGKTTTILCLAR----ALLGVSFKDAVLELNASNDRGIDVVRNKIKMFAQQ 428
+++ GPPG KTT + LA + + VS D +++ + ++F Q
Sbjct: 500 GVLLYGPPGCAKTTLVRALATSCHCSFVSVSGADLFSPFVGDSEKVLS------QIFRQA 553
Query: 429 KVTLPPGRHKIVILDEADSMTDGAQQALRT 518
+ + P I+ LDE DS+ GA+ A +T
Sbjct: 554 RASTP----AILFLDEIDSIL-GARSASKT 578
>AY358864-1|AAQ89223.1| 310|Homo sapiens AGAA5828 protein.
Length = 310
Score = 31.1 bits (67), Expect = 3.0
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +3
Query: 270 IAGPPGVGKTTTILCLARALLGVSFKDAVLELNASND 380
+ GPPG GKTT L ++ L + + AV+ L+ +N+
Sbjct: 14 VIGPPGSGKTTYCLGMSEFLRALGRRVAVVNLDPANE 50
>AL034380-4|CAB92117.1| 310|Homo sapiens novel protein protein.
Length = 310
Score = 31.1 bits (67), Expect = 3.0
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +3
Query: 270 IAGPPGVGKTTTILCLARALLGVSFKDAVLELNASND 380
+ GPPG GKTT L ++ L + + AV+ L+ +N+
Sbjct: 14 VIGPPGSGKTTYCLGMSEFLRALGRRVAVVNLDPANE 50
>AL034380-3|CAI21619.1| 172|Homo sapiens novel protein protein.
Length = 172
Score = 31.1 bits (67), Expect = 3.0
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +3
Query: 270 IAGPPGVGKTTTILCLARALLGVSFKDAVLELNASND 380
+ GPPG GKTT L ++ L + + AV+ L+ +N+
Sbjct: 14 VIGPPGSGKTTYCLGMSEFLRALGRRVAVVNLDPANE 50
>AK023232-1|BAB14482.1| 620|Homo sapiens protein ( Homo sapiens
cDNA FLJ13170 fis, clone NT2RP3003809, weakly similar to
SAV PROTEIN. ).
Length = 620
Score = 31.1 bits (67), Expect = 3.0
Identities = 22/75 (29%), Positives = 36/75 (48%)
Frame = +3
Query: 264 IIIAGPPGVGKTTTILCLARALLGVSFKDAVLELNASNDRGIDVVRNKIKMFAQQKVTLP 443
+++AGPPGVGKT + +AR G AV R + N ++F + +
Sbjct: 237 VLLAGPPGVGKTQLVQAVARE-AGAELL-AVSAPALQGSRPGETEENVRRVFQRARELAS 294
Query: 444 PGRHKIVILDEADSM 488
G ++ LDE D++
Sbjct: 295 RG-PSLLFLDEMDAL 308
Score = 29.5 bits (63), Expect = 9.1
Identities = 38/150 (25%), Positives = 67/150 (44%), Gaps = 17/150 (11%)
Frame = +3
Query: 120 KQVKPSSSKSTNLPWIEKYRPQTFDDIVGNEDTVSRLAV-----------FAKTG--NAP 260
K ++PSS +S + + +P +++I G ED +L F + G
Sbjct: 442 KNIQPSSFRS--VIGLMDIKPVDWEEIGGLEDVKLKLKQSIEWPLKFPWEFVRMGLTQPK 499
Query: 261 NIIIAGPPGVGKTTTILCLAR----ALLGVSFKDAVLELNASNDRGIDVVRNKIKMFAQQ 428
+++ GPPG KTT + LA + + VS D +++ + ++F Q
Sbjct: 500 GVLLYGPPGCAKTTLVRALATSCHCSFVSVSGADLFSPFVGDSEKVLS------QIFRQA 553
Query: 429 KVTLPPGRHKIVILDEADSMTDGAQQALRT 518
+ + P I+ LDE DS+ GA+ A +T
Sbjct: 554 RASTP----AILFLDEIDSIL-GARSASKT 578
>AK022535-1|BAB14084.1| 310|Homo sapiens protein ( Homo sapiens
cDNA FLJ12473 fis, clone NT2RM1000924, weakly similar to
HYPOTHETICAL 39.7 KD PROTEIN C34E10.2 IN CHROMOSOME III.
).
Length = 310
Score = 31.1 bits (67), Expect = 3.0
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +3
Query: 270 IAGPPGVGKTTTILCLARALLGVSFKDAVLELNASND 380
+ GPPG GKTT L ++ L + + AV+ L+ +N+
Sbjct: 14 VIGPPGSGKTTYCLGMSEFLRALGRRVAVVNLDPANE 50
>L14754-1|AAA53082.1| 993|Homo sapiens DNA-binding protein protein.
Length = 993
Score = 30.7 bits (66), Expect = 3.9
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = +3
Query: 213 DTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTIL 311
DT + AV II GPPG GKTTT++
Sbjct: 193 DTSQKEAVSFALSQKELAIIHGPPGTGKTTTVV 225
>BC105090-1|AAI05091.1| 993|Homo sapiens immunoglobulin mu binding
protein 2 protein.
Length = 993
Score = 30.7 bits (66), Expect = 3.9
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = +3
Query: 213 DTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTIL 311
DT + AV II GPPG GKTTT++
Sbjct: 193 DTSQKEAVSFALSQKELAIIHGPPGTGKTTTVV 225
>BC105088-1|AAI05089.1| 993|Homo sapiens immunoglobulin mu binding
protein 2 protein.
Length = 993
Score = 30.7 bits (66), Expect = 3.9
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = +3
Query: 213 DTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTIL 311
DT + AV II GPPG GKTTT++
Sbjct: 193 DTSQKEAVSFALSQKELAIIHGPPGTGKTTTVV 225
>BC000290-1|AAH00290.1| 868|Homo sapiens IGHMBP2 protein protein.
Length = 868
Score = 30.7 bits (66), Expect = 3.9
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = +3
Query: 213 DTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTIL 311
DT + AV II GPPG GKTTT++
Sbjct: 193 DTSQKEAVSFALSQKELAIIHGPPGTGKTTTVV 225
>Y18418-1|CAB46271.1| 456|Homo sapiens erythrocyte cytosolic
protein of 54 kDa, ECP-54 protein.
Length = 456
Score = 30.3 bits (65), Expect = 5.2
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +3
Query: 264 IIIAGPPGVGKTTTILCLARAL 329
+++AGPPG GKT L +A+ L
Sbjct: 66 VLLAGPPGTGKTALALAIAQEL 87
>D80009-1|BAA11504.2| 1285|Homo sapiens KIAA0187 protein.
Length = 1285
Score = 30.3 bits (65), Expect = 5.2
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +3
Query: 264 IIIAGPPGVGKTTTILCLAR 323
+++ GPP VGK+T I CL R
Sbjct: 88 VVVMGPPKVGKSTLIQCLIR 107
>DQ469310-1|ABF13334.1| 386|Homo sapiens RUVBL1-FK protein.
Length = 386
Score = 30.3 bits (65), Expect = 5.2
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +3
Query: 264 IIIAGPPGVGKTTTILCLARAL 329
+++AGPPG GKT L +A+ L
Sbjct: 66 VLLAGPPGTGKTALALAIAQEL 87
>BT007057-1|AAP35706.1| 456|Homo sapiens RuvB-like 1 (E. coli)
protein.
Length = 456
Score = 30.3 bits (65), Expect = 5.2
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +3
Query: 264 IIIAGPPGVGKTTTILCLARAL 329
+++AGPPG GKT L +A+ L
Sbjct: 66 VLLAGPPGTGKTALALAIAQEL 87
>BC150252-1|AAI50253.1| 1282|Homo sapiens BMS1 homolog, ribosome
assembly protein (yeast) protein.
Length = 1282
Score = 30.3 bits (65), Expect = 5.2
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +3
Query: 264 IIIAGPPGVGKTTTILCLAR 323
+++ GPP VGK+T I CL R
Sbjct: 85 VVVMGPPKVGKSTLIQCLIR 104
>BC043345-1|AAH43345.1| 1282|Homo sapiens BMS1 homolog, ribosome
assembly protein (yeast) protein.
Length = 1282
Score = 30.3 bits (65), Expect = 5.2
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +3
Query: 264 IIIAGPPGVGKTTTILCLAR 323
+++ GPP VGK+T I CL R
Sbjct: 85 VVVMGPPKVGKSTLIQCLIR 104
>BC035132-1|AAH35132.1| 743|Homo sapiens threonine synthase-like 1
(S. cerevisiae) protein.
Length = 743
Score = 30.3 bits (65), Expect = 5.2
Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
Frame = +3
Query: 261 NIIIAGPPGVGKTTTILCLARAL--LGVSFKDAVLELN 368
NII+ GPPG GKTT + + L + D +LE N
Sbjct: 57 NIILMGPPGAGKTTVGRIIGQKLGCCVIDVDDDILEKN 94
>BC012886-1|AAH12886.1| 456|Homo sapiens RuvB-like 1 (E. coli)
protein.
Length = 456
Score = 30.3 bits (65), Expect = 5.2
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +3
Query: 264 IIIAGPPGVGKTTTILCLARAL 329
+++AGPPG GKT L +A+ L
Sbjct: 66 VLLAGPPGTGKTALALAIAQEL 87
>BC009312-1|AAH09312.1| 1003|Homo sapiens Mov10, Moloney leukemia
virus 10, homolog (mouse) protein.
Length = 1003
Score = 30.3 bits (65), Expect = 5.2
Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 2/78 (2%)
Frame = +3
Query: 225 RLAVFAKTGNAPNIIIAGPPGVGKTTTILCLARALLGVSFKDAVLELNASNDRGIDVVRN 404
R V T AP II GPPG GKT T++ + ++ K +L SN G D++
Sbjct: 508 RHIVTGTTRPAPYIIF-GPPGTGKTVTLVEAIKQVVKHLPKAHILACAPSNS-GADLLCQ 565
Query: 405 KIKMFAQQKV--TLPPGR 452
++++ + L P R
Sbjct: 566 RLRVHLPSSIYRLLAPSR 583
>BC004499-1|AAH04499.2| 601|Homo sapiens MOV10 protein protein.
Length = 601
Score = 30.3 bits (65), Expect = 5.2
Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 2/78 (2%)
Frame = +3
Query: 225 RLAVFAKTGNAPNIIIAGPPGVGKTTTILCLARALLGVSFKDAVLELNASNDRGIDVVRN 404
R V T AP II GPPG GKT T++ + ++ K +L SN G D++
Sbjct: 106 RHIVTGTTRPAPYIIF-GPPGTGKTVTLVEAIKQVVKHLPKAHILACAPSNS-GADLLCQ 163
Query: 405 KIKMFAQQKV--TLPPGR 452
++++ + L P R
Sbjct: 164 RLRVHLPSSIYRLLAPSR 181
>BC002993-1|AAH02993.1| 456|Homo sapiens RuvB-like 1 (E. coli)
protein.
Length = 456
Score = 30.3 bits (65), Expect = 5.2
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +3
Query: 264 IIIAGPPGVGKTTTILCLARAL 329
+++AGPPG GKT L +A+ L
Sbjct: 66 VLLAGPPGTGKTALALAIAQEL 87
>BC002548-1|AAH02548.1| 1003|Homo sapiens Mov10, Moloney leukemia
virus 10, homolog (mouse) protein.
Length = 1003
Score = 30.3 bits (65), Expect = 5.2
Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 2/78 (2%)
Frame = +3
Query: 225 RLAVFAKTGNAPNIIIAGPPGVGKTTTILCLARALLGVSFKDAVLELNASNDRGIDVVRN 404
R V T AP II GPPG GKT T++ + ++ K +L SN G D++
Sbjct: 508 RHIVTGTTRPAPYIIF-GPPGTGKTVTLVEAIKQVVKHLPKAHILACAPSNS-GADLLCQ 565
Query: 405 KIKMFAQQKV--TLPPGR 452
++++ + L P R
Sbjct: 566 RLRVHLPSSIYRLLAPSR 583
>AL603832-3|CAI14056.1| 947|Homo sapiens Mov10, Moloney leukemia
virus 10, homolog (mouse) protein.
Length = 947
Score = 30.3 bits (65), Expect = 5.2
Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 2/78 (2%)
Frame = +3
Query: 225 RLAVFAKTGNAPNIIIAGPPGVGKTTTILCLARALLGVSFKDAVLELNASNDRGIDVVRN 404
R V T AP II GPPG GKT T++ + ++ K +L SN G D++
Sbjct: 452 RHIVTGTTRPAPYIIF-GPPGTGKTVTLVEAIKQVVKHLPKAHILACAPSNS-GADLLCQ 509
Query: 405 KIKMFAQQKV--TLPPGR 452
++++ + L P R
Sbjct: 510 RLRVHLPSSIYRLLAPSR 527
>AL603832-2|CAI14055.1| 1003|Homo sapiens Mov10, Moloney leukemia
virus 10, homolog (mouse) protein.
Length = 1003
Score = 30.3 bits (65), Expect = 5.2
Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 2/78 (2%)
Frame = +3
Query: 225 RLAVFAKTGNAPNIIIAGPPGVGKTTTILCLARALLGVSFKDAVLELNASNDRGIDVVRN 404
R V T AP II GPPG GKT T++ + ++ K +L SN G D++
Sbjct: 508 RHIVTGTTRPAPYIIF-GPPGTGKTVTLVEAIKQVVKHLPKAHILACAPSNS-GADLLCQ 565
Query: 405 KIKMFAQQKV--TLPPGR 452
++++ + L P R
Sbjct: 566 RLRVHLPSSIYRLLAPSR 583
>AL022344-4|CAI23617.1| 1282|Homo sapiens BMS1-like, ribosome
assembly protein (yeast) protein.
Length = 1282
Score = 30.3 bits (65), Expect = 5.2
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +3
Query: 264 IIIAGPPGVGKTTTILCLAR 323
+++ GPP VGK+T I CL R
Sbjct: 85 VVVMGPPKVGKSTLIQCLIR 104
>AK222575-1|BAD96295.1| 456|Homo sapiens TATA binding protein
interacting protein 49 kDa variant protein.
Length = 456
Score = 30.3 bits (65), Expect = 5.2
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +3
Query: 264 IIIAGPPGVGKTTTILCLARAL 329
+++AGPPG GKT L +A+ L
Sbjct: 66 VLLAGPPGTGKTALALAIAQEL 87
>AK222563-1|BAD96283.1| 456|Homo sapiens TATA binding protein
interacting protein 49 kDa variant protein.
Length = 456
Score = 30.3 bits (65), Expect = 5.2
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +3
Query: 264 IIIAGPPGVGKTTTILCLARAL 329
+++AGPPG GKT L +A+ L
Sbjct: 66 VLLAGPPGTGKTALALAIAQEL 87
>AK074174-1|BAB85000.1| 925|Homo sapiens FLJ00247 protein protein.
Length = 925
Score = 30.3 bits (65), Expect = 5.2
Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 2/78 (2%)
Frame = +3
Query: 225 RLAVFAKTGNAPNIIIAGPPGVGKTTTILCLARALLGVSFKDAVLELNASNDRGIDVVRN 404
R V T AP II GPPG GKT T++ + ++ K +L SN G D++
Sbjct: 533 RHIVTGTTRPAPYIIF-GPPGTGKTVTLVEAIKQVVKHLPKAHILACAPSNS-GADLLCQ 590
Query: 405 KIKMFAQQKV--TLPPGR 452
++++ + L P R
Sbjct: 591 RLRVHLPSSIYRLLAPSR 608
>AJ010058-1|CAA08986.1| 456|Homo sapiens Nuclear matrix protein
NMP238 protein.
Length = 456
Score = 30.3 bits (65), Expect = 5.2
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +3
Query: 264 IIIAGPPGVGKTTTILCLARAL 329
+++AGPPG GKT L +A+ L
Sbjct: 66 VLLAGPPGTGKTALALAIAQEL 87
>AF380344-1|AAM45570.1| 456|Homo sapiens pontin 52 protein.
Length = 456
Score = 30.3 bits (65), Expect = 5.2
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +3
Query: 264 IIIAGPPGVGKTTTILCLARAL 329
+++AGPPG GKT L +A+ L
Sbjct: 66 VLLAGPPGTGKTALALAIAQEL 87
>AF099084-1|AAD04427.1| 456|Homo sapiens Pontin52 protein.
Length = 456
Score = 30.3 bits (65), Expect = 5.2
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +3
Query: 264 IIIAGPPGVGKTTTILCLARAL 329
+++AGPPG GKT L +A+ L
Sbjct: 66 VLLAGPPGTGKTALALAIAQEL 87
>AF098534-1|AAC97951.1| 584|Homo sapiens RAD17 isoform 4 protein.
Length = 584
Score = 30.3 bits (65), Expect = 5.2
Identities = 11/20 (55%), Positives = 16/20 (80%)
Frame = +3
Query: 264 IIIAGPPGVGKTTTILCLAR 323
++I GPPG GKTTT+ L++
Sbjct: 36 LLITGPPGCGKTTTLKILSK 55
>AF070735-1|AAC77819.1| 456|Homo sapiens RuvB-like protein RUVBL1
protein.
Length = 456
Score = 30.3 bits (65), Expect = 5.2
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +3
Query: 264 IIIAGPPGVGKTTTILCLARAL 329
+++AGPPG GKT L +A+ L
Sbjct: 66 VLLAGPPGTGKTALALAIAQEL 87
>AB046851-1|BAB13457.1| 1032|Homo sapiens KIAA1631 protein protein.
Length = 1032
Score = 30.3 bits (65), Expect = 5.2
Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 2/78 (2%)
Frame = +3
Query: 225 RLAVFAKTGNAPNIIIAGPPGVGKTTTILCLARALLGVSFKDAVLELNASNDRGIDVVRN 404
R V T AP II GPPG GKT T++ + ++ K +L SN G D++
Sbjct: 537 RHIVTGTTRPAPYIIF-GPPGTGKTVTLVEAIKQVVKHLPKAHILACAPSNS-GADLLCQ 594
Query: 405 KIKMFAQQKV--TLPPGR 452
++++ + L P R
Sbjct: 595 RLRVHLPSSIYRLLAPSR 612
>AB012122-1|BAA28169.1| 456|Homo sapiens TIP49 protein.
Length = 456
Score = 30.3 bits (65), Expect = 5.2
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +3
Query: 264 IIIAGPPGVGKTTTILCLARAL 329
+++AGPPG GKT L +A+ L
Sbjct: 66 VLLAGPPGTGKTALALAIAQEL 87
>X69821-1|CAA49475.1| 521|Homo sapiens LLDBP protein.
Length = 521
Score = 29.9 bits (64), Expect = 6.8
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +3
Query: 135 SSSKSTNLPWIEKYRPQTFDDIVGNE 212
S +K NL W++KY+P + I+G +
Sbjct: 466 SENKVENLLWVDKYKPTSLKTIIGQQ 491
>BC130373-1|AAI30374.1| 633|Homo sapiens ClpX caseinolytic
peptidase X homolog (E. coli) protein.
Length = 633
Score = 29.9 bits (64), Expect = 6.8
Identities = 23/77 (29%), Positives = 32/77 (41%), Gaps = 1/77 (1%)
Frame = +3
Query: 261 NIIIAGPPGVGKTTTILCLARALLGVSFKDA-VLELNASNDRGIDVVRNKIKMFAQQKVT 437
NI++ GP G GKT LA+ L V F L + G D+ K+
Sbjct: 288 NILLLGPTGSGKTLLAQTLAKC-LDVPFAICDCTTLTQAGYVGEDIESVIAKLLQDANYN 346
Query: 438 LPPGRHKIVILDEADSM 488
+ + IV LDE D +
Sbjct: 347 VEKAQQGIVFLDEVDKI 363
>BC007426-1|AAH07426.1| 172|Homo sapiens TAF9 RNA polymerase II,
TATA box binding protein (TBP)-associated factor, 32kDa
protein.
Length = 172
Score = 29.9 bits (64), Expect = 6.8
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +3
Query: 258 PNIIIAGPPGVGKTT 302
PNI++ G PGVGKTT
Sbjct: 4 PNILLTGTPGVGKTT 18
>BC007349-1|AAH07349.1| 172|Homo sapiens TAF9 RNA polymerase II,
TATA box binding protein (TBP)-associated factor, 32kDa
protein.
Length = 172
Score = 29.9 bits (64), Expect = 6.8
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +3
Query: 258 PNIIIAGPPGVGKTT 302
PNI++ G PGVGKTT
Sbjct: 4 PNILLTGTPGVGKTT 18
>AJ878881-1|CAI48031.1| 172|Homo sapiens coilin-interacting nulcear
ATPase protein protein.
Length = 172
Score = 29.9 bits (64), Expect = 6.8
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +3
Query: 258 PNIIIAGPPGVGKTT 302
PNI++ G PGVGKTT
Sbjct: 4 PNILLTGTPGVGKTT 18
>AJ878880-1|CAI48030.1| 172|Homo sapiens coilin-interacting nuclear
ATPase protein protein.
Length = 172
Score = 29.9 bits (64), Expect = 6.8
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +3
Query: 258 PNIIIAGPPGVGKTT 302
PNI++ G PGVGKTT
Sbjct: 4 PNILLTGTPGVGKTT 18
>AJ276980-1|CAC01291.1| 633|Homo sapiens ClpX protein protein.
Length = 633
Score = 29.9 bits (64), Expect = 6.8
Identities = 23/77 (29%), Positives = 32/77 (41%), Gaps = 1/77 (1%)
Frame = +3
Query: 261 NIIIAGPPGVGKTTTILCLARALLGVSFKDA-VLELNASNDRGIDVVRNKIKMFAQQKVT 437
NI++ GP G GKT LA+ L V F L + G D+ K+
Sbjct: 288 NILLLGPTGSGKTLLAQTLAKC-LDVPFAICDCTTLTQAGYVGEDIESVIAKLLQDANYN 346
Query: 438 LPPGRHKIVILDEADSM 488
+ + IV LDE D +
Sbjct: 347 VEKAQQGIVFLDEVDKI 363
>AJ006267-1|CAA06933.2| 633|Homo sapiens ClpX-like protein protein.
Length = 633
Score = 29.9 bits (64), Expect = 6.8
Identities = 23/77 (29%), Positives = 32/77 (41%), Gaps = 1/77 (1%)
Frame = +3
Query: 261 NIIIAGPPGVGKTTTILCLARALLGVSFKDA-VLELNASNDRGIDVVRNKIKMFAQQKVT 437
NI++ GP G GKT LA+ L V F L + G D+ K+
Sbjct: 288 NILLLGPTGSGKTLLAQTLAKC-LDVPFAICDCTTLTQAGYVGEDIESVIAKLLQDANYN 346
Query: 438 LPPGRHKIVILDEADSM 488
+ + IV LDE D +
Sbjct: 347 VEKAQQGIVFLDEVDKI 363
>AF151895-1|AAD34132.1| 172|Homo sapiens CGI-137 protein protein.
Length = 172
Score = 29.9 bits (64), Expect = 6.8
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +3
Query: 258 PNIIIAGPPGVGKTT 302
PNI++ G PGVGKTT
Sbjct: 4 PNILLTGTPGVGKTT 18
>AF110777-1|AAF14860.1| 172|Homo sapiens adrenal gland protein
AD-004 protein.
Length = 172
Score = 29.9 bits (64), Expect = 6.8
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +3
Query: 258 PNIIIAGPPGVGKTT 302
PNI++ G PGVGKTT
Sbjct: 4 PNILLTGTPGVGKTT 18
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,650,675
Number of Sequences: 237096
Number of extensions: 1325516
Number of successful extensions: 4394
Number of sequences better than 10.0: 136
Number of HSP's better than 10.0 without gapping: 4114
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4354
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6042162242
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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