Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov11e05
(581 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g63160.1 68414.m07138 replication factor C 40 kDa, putative s... 201 3e-52
At1g77470.1 68414.m09021 replication factor C 36 kDA, putative s... 129 1e-30
At1g21690.1 68414.m02714 replication factor C 37 kDa, putative S... 116 9e-27
At1g21690.2 68414.m02715 replication factor C 37 kDa, putative S... 101 3e-22
At5g27740.1 68418.m03327 expressed protein 55 4e-08
At1g24290.1 68414.m03065 AAA-type ATPase family protein similar ... 50 1e-06
At5g22010.1 68418.m02561 AAA-type ATPase family protein / BRCT d... 48 3e-06
At1g14460.1 68414.m01715 DNA polymerase-related weak similarity ... 42 3e-04
At5g66130.1 68418.m08331 cell cycle checkpoint protein-related w... 41 5e-04
At4g24790.1 68417.m03550 expressed protein ; expression supporte... 40 0.001
At2g02480.1 68415.m00187 DNA polymerase-related weak similarity ... 40 0.001
At5g45720.1 68418.m05621 hypothetical protein 40 0.002
At1g04730.1 68414.m00469 AAA-type ATPase family protein contains... 39 0.002
At1g73170.1 68414.m08466 expressed protein 39 0.003
At1g33290.1 68414.m04117 sporulation protein-related isoform con... 38 0.004
At5g49840.1 68418.m06172 ATP-dependent Clp protease ATP-binding ... 37 0.011
At4g18820.1 68417.m02778 expressed protein 36 0.015
At4g14370.1 68417.m02214 disease resistance protein (TIR-NBS-LRR... 35 0.034
At1g33360.1 68414.m04129 ATP-dependent Clp protease ATP-binding ... 35 0.034
At5g53350.1 68418.m06630 ATP-dependent Clp protease ATP-binding ... 34 0.079
At1g33290.2 68414.m04118 sporulation protein-related isoform con... 34 0.079
At1g74310.1 68414.m08605 heat shock protein 101 (HSP101) identic... 33 0.11
At3g10420.2 68416.m01250 sporulation protein-related similar to ... 33 0.14
At3g10420.1 68416.m01249 sporulation protein-related similar to ... 33 0.14
At1g63880.1 68414.m07234 disease resistance protein (TIR-NBS-LRR... 33 0.14
At3g04210.1 68416.m00445 disease resistance protein (TIR-NBS cla... 33 0.18
At5g60340.1 68418.m07564 maoC-like dehydratase domain-containing... 32 0.24
At5g18370.1 68418.m02161 disease resistance protein (TIR-NBS-LRR... 32 0.24
At4g05540.1 68417.m00843 tRNA-splicing endonuclease positive eff... 32 0.24
At2g03670.1 68415.m00326 AAA-type ATPase family protein contains... 32 0.24
At2g03270.1 68415.m00280 DNA-binding protein, putative similar t... 32 0.24
At2g25140.1 68415.m03007 heat shock protein 100, putative / HSP1... 32 0.32
At5g37140.1 68418.m04458 tRNA-splicing endonuclease positive eff... 31 0.42
At5g15450.1 68418.m01808 heat shock protein 100, putative / HSP1... 31 0.42
At4g15570.1 68417.m02379 tRNA-splicing endonuclease positive eff... 31 0.42
At5g46470.1 68418.m05723 disease resistance protein (TIR-NBS-LRR... 31 0.56
At5g37150.1 68418.m04460 tRNA-splicing endonuclease positive eff... 31 0.56
At5g26860.1 68418.m03204 Lon protease homolog 2, mitochondrial a... 31 0.56
At4g14670.1 68417.m02255 heat shock protein 101, putative / HSP1... 31 0.56
At1g77620.1 68414.m09037 expressed protein 31 0.56
At1g64110.2 68414.m07264 AAA-type ATPase family protein contains... 31 0.56
At1g64110.1 68414.m07263 AAA-type ATPase family protein contains... 31 0.56
At5g22370.1 68418.m02610 ATP-binding family protein contains Pfa... 31 0.74
At3g44400.1 68416.m04770 disease resistance protein (TIR-NBS-LRR... 31 0.74
At3g04220.1 68416.m00446 disease resistance protein (TIR-NBS-LRR... 31 0.74
At5g66005.2 68418.m08311 Expressed protein 30 0.98
At5g38340.1 68418.m04627 disease resistance protein (TIR-NBS-LRR... 30 0.98
At5g37160.1 68418.m04461 tRNA-splicing endonuclease positive eff... 30 0.98
At4g04180.1 68417.m00593 AAA-type ATPase family protein contains... 30 0.98
At3g47730.1 68416.m05200 ABC transporter family protein AbcA, Di... 30 0.98
At3g28610.1 68416.m03571 AAA-type ATPase family protein contains... 30 0.98
At3g05780.1 68416.m00649 Lon protease, putative similar to Lon p... 30 0.98
At1g16280.1 68414.m01949 DEAD/DEAH box helicase, putative simila... 30 0.98
At4g28000.1 68417.m04016 AAA-type ATPase family protein contains... 30 1.3
At1g16800.1 68414.m02018 tRNA-splicing endonuclease positive eff... 30 1.3
At1g05460.1 68414.m00555 RNA helicase SDE3 (SDE3) identical to R... 30 1.3
At5g57480.1 68418.m07183 AAA-type ATPase family protein contains... 29 2.3
At5g38850.1 68418.m04699 disease resistance protein (TIR-NBS-LRR... 29 2.3
At5g17970.1 68418.m02108 disease resistance protein (TIR-NBS-LRR... 29 2.3
At3g48870.1 68416.m05338 ATP-dependent Clp protease ATP-binding ... 29 2.3
At5g18350.1 68418.m02159 disease resistance protein (TIR-NBS-LRR... 29 3.0
At4g25835.1 68417.m03716 AAA-type ATPase family protein contains... 29 3.0
At4g23940.1 68417.m03443 FtsH protease, putative contains simila... 29 3.0
At4g19500.1 68417.m02868 disease resistance protein (TIR-NBS-LRR... 29 3.0
At4g11170.1 68417.m01809 disease resistance protein (TIR-NBS-LRR... 29 3.0
At1g63730.1 68414.m07212 disease resistance protein (TIR-NBS-LRR... 29 3.0
At5g50920.1 68418.m06315 ATP-dependent Clp protease ATP-binding ... 28 4.0
At5g47040.1 68418.m05797 Lon protease homolog 1, mitochondrial (... 28 4.0
At5g17740.1 68418.m02080 AAA-type ATPase family protein h-bcs1, ... 28 4.0
At5g06530.2 68418.m00737 ABC transporter family protein 28 4.0
At5g06530.1 68418.m00736 ABC transporter family protein 28 4.0
At4g15236.1 68417.m02335 ABC transporter family protein similar ... 28 4.0
At4g08450.1 68417.m01393 disease resistance protein (TIR-NBS-LRR... 28 4.0
At1g67460.1 68414.m07681 hypothetical protein contains Pfam doma... 28 4.0
At5g64580.1 68418.m08116 AAA-type ATPase family protein similar ... 28 5.2
At5g61730.1 68418.m07746 ABC transporter family protein contains... 28 5.2
At5g61690.1 68418.m07740 ABC transporter family protein ABC tran... 28 5.2
At5g17730.1 68418.m02079 AAA-type ATPase family protein contains... 28 5.2
At4g38510.2 68417.m05447 vacuolar ATP synthase subunit B, putati... 28 5.2
At4g38510.1 68417.m05446 vacuolar ATP synthase subunit B, putati... 28 5.2
At3g28580.1 68416.m03568 AAA-type ATPase family protein contains... 28 5.2
At3g03060.1 68416.m00302 AAA-type ATPase family protein contains... 28 5.2
At2g16870.1 68415.m01941 disease resistance protein (TIR-NBS-LRR... 28 5.2
At1g76030.1 68414.m08827 vacuolar ATP synthase subunit B / V-ATP... 28 5.2
At1g67120.1 68414.m07636 midasin-related similar to Midasin (MID... 28 5.2
At1g56520.1 68414.m06499 disease resistance protein (TIR-NBS-LRR... 28 5.2
At1g20260.1 68414.m02529 vacuolar ATP synthase subunit B, putati... 28 5.2
At5g67630.1 68418.m08527 DNA helicase, putative similar to RuvB-... 27 6.9
At5g66910.1 68418.m08434 disease resistance protein (CC-NBS-LRR ... 27 6.9
At5g52090.1 68418.m06466 tRNA-splicing endonuclease positive eff... 27 6.9
At5g50340.1 68418.m06235 DNA repair protein-related similar to R... 27 6.9
At5g43470.2 68418.m05315 disease resistance protein (CC-NBS-LRR ... 27 6.9
At5g43470.1 68418.m05314 disease resistance protein (CC-NBS-LRR ... 27 6.9
At5g22330.1 68418.m02605 TATA box-binding protein-interacting pr... 27 6.9
At5g16930.1 68418.m01984 AAA-type ATPase family protein contains... 27 6.9
At3g50940.1 68416.m05577 AAA-type ATPase family protein contains... 27 6.9
At3g50930.1 68416.m05576 AAA-type ATPase family protein contains... 27 6.9
At3g05790.1 68416.m00650 Lon protease, putative similar to Lon p... 27 6.9
At2g29940.1 68415.m03642 ABC transporter family protein similar ... 27 6.9
At1g72860.1 68414.m08427 disease resistance protein (TIR-NBS-LRR... 27 6.9
At1g63740.1 68414.m07213 disease resistance protein (TIR-NBS-LRR... 27 6.9
At1g31540.1 68414.m03869 disease resistance protein (TIR-NBS-LRR... 27 6.9
At1g06720.1 68414.m00714 expressed protein contains Pfam domain,... 27 6.9
At5g62830.1 68418.m07886 F-box family protein-related similar to... 27 9.1
At5g41740.1 68418.m05076 disease resistance protein (TIR-NBS-LRR... 27 9.1
At5g40000.1 68418.m04851 AAA-type ATPase family protein BCS1 nuc... 27 9.1
At5g11250.1 68418.m01314 disease resistance protein (TIR-NBS-LRR... 27 9.1
At4g36580.1 68417.m05193 AAA-type ATPase family protein contains... 27 9.1
At4g30250.1 68417.m04301 AAA-type ATPase family protein contains... 27 9.1
At4g26090.1 68417.m03756 disease resistance protein RPS2 (CC-NBS... 27 9.1
At4g24710.1 68417.m03536 AAA-type ATPase family protein similar ... 27 9.1
At3g57550.1 68416.m06408 guanylate kinase 2 (GK-2) identical to ... 27 9.1
At3g45790.1 68416.m04955 protein kinase-related contains eukaryo... 27 9.1
At3g16290.1 68416.m02056 FtsH protease, putative contains simila... 27 9.1
At2g41880.1 68415.m05179 guanylate kinase 1 (GK-1) identical to ... 27 9.1
At2g37010.1 68415.m04539 ABC transporter family protein contains... 27 9.1
At2g18330.1 68415.m02136 AAA-type ATPase family protein contains... 27 9.1
At2g18193.1 68415.m02117 AAA-type ATPase family protein contains... 27 9.1
At1g65810.1 68414.m07468 tRNA-splicing endonuclease positive eff... 27 9.1
At1g64070.1 68414.m07258 disease resistance protein (TIR-NBS-LRR... 27 9.1
>At1g63160.1 68414.m07138 replication factor C 40 kDa, putative
similar to SWISS-PROT:Q9WUK4 activator 1 40 kDa subunit
(Replication factor C 40 kDa subunit, A1 40 kDa subunit,
RF-C 40 kDa subunit, RFC40) [Mus musculus]
Length = 333
Score = 201 bits (490), Expect = 3e-52
Identities = 98/131 (74%), Positives = 110/131 (83%), Gaps = 4/131 (3%)
Frame = +3
Query: 135 SSSKST----NLPWIEKYRPQTFDDIVGNEDTVSRLAVFAKTGNAPNIIIAGPPGVGKTT 302
SSS ST N PW+EKYRP DIVGNED VSRL V A+ GN PN+I++GPPG GKTT
Sbjct: 4 SSSTSTGDGYNEPWVEKYRPSKVVDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTT 63
Query: 303 TILCLARALLGVSFKDAVLELNASNDRGIDVVRNKIKMFAQQKVTLPPGRHKIVILDEAD 482
+IL LA LLG ++K+AVLELNAS+DRGIDVVRNKIKMFAQ+KVTLPPGRHK+VILDEAD
Sbjct: 64 SILALAHELLGTNYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILDEAD 123
Query: 483 SMTDGAQQALR 515
SMT GAQQALR
Sbjct: 124 SMTSGAQQALR 134
Score = 33.5 bits (73), Expect = 0.11
Identities = 14/21 (66%), Positives = 18/21 (85%)
Frame = +1
Query: 517 RTMELYSSTTRFALAANNSEK 579
RT+E+YS++TRFALA N S K
Sbjct: 135 RTIEIYSNSTRFALACNTSAK 155
>At1g77470.1 68414.m09021 replication factor C 36 kDA, putative
similar to SWISS-PROT:P40937 activator 1 36 kDa subunit
(Replication factor C 36 kDa subunit, A1 36 kDa subunit,
RF-C 36 kDa subunit, RFC36) [Homo sapiens]
Length = 369
Score = 129 bits (312), Expect = 1e-30
Identities = 63/129 (48%), Positives = 87/129 (67%), Gaps = 1/129 (0%)
Frame = +3
Query: 132 PSSSKSTNLPWIEKYRPQTFDDIVGNEDTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTIL 311
P SK+T PW+EKYRPQ+ DD+ + D + + P++++ GPPG GKT+TIL
Sbjct: 33 PPQSKAT--PWVEKYRPQSLDDVAAHRDIIDTIDRLTNENKLPHLLLYGPPGTGKTSTIL 90
Query: 312 CLARALLGVSFKDAVLELNASNDRGIDVVRNKIKMFAQ-QKVTLPPGRHKIVILDEADSM 488
+AR L G +++ +LELNAS+DRGIDVVR +I+ FA Q +L K+V+LDEAD+M
Sbjct: 91 AVARKLYGPKYRNMILELNASDDRGIDVVRQQIQDFASTQSFSLGKSSVKLVLLDEADAM 150
Query: 489 TDGAQQALR 515
T AQ ALR
Sbjct: 151 TKDAQFALR 159
>At1g21690.1 68414.m02714 replication factor C 37 kDa, putative
Similar to SWISS-PROT:P35249 activator 1 37 kDa subunit
(Replication factor C 37 kDa subunit, A1 37 kDa subunit,
RF-C 37 kDa subunit, RFC37) [Homo sapiens]; contains
Pfam domain, PF00004: ATPase, AAA family
Length = 339
Score = 116 bits (280), Expect = 9e-27
Identities = 63/127 (49%), Positives = 80/127 (62%), Gaps = 8/127 (6%)
Frame = +3
Query: 159 PWIEKYRPQTFDDIVGNEDTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTILCLARALLGV 338
PW+EKYRP+ D+ E+ V L +T + P+++ GPPG GKTTT L +A L G
Sbjct: 10 PWVEKYRPKQVKDVAHQEEVVRVLTNTLQTADCPHMLFYGPPGTGKTTTALAIAHQLFGP 69
Query: 339 S-FKDAVLELNASNDRGIDVVRNKIKMFA-------QQKVTLPPGRHKIVILDEADSMTD 494
+K VLELNAS+DRGI+VVR KIK FA ++ P KI+ILDEADSMT+
Sbjct: 70 ELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSNHRQSGYPCPSFKIIILDEADSMTE 129
Query: 495 GAQQALR 515
AQ ALR
Sbjct: 130 DAQNALR 136
>At1g21690.2 68414.m02715 replication factor C 37 kDa, putative
Similar to SWISS-PROT:P35249 activator 1 37 kDa subunit
(Replication factor C 37 kDa subunit, A1 37 kDa subunit,
RF-C 37 kDa subunit, RFC37) [Homo sapiens]; contains
Pfam domain, PF00004: ATPase, AAA family
Length = 327
Score = 101 bits (242), Expect = 3e-22
Identities = 60/127 (47%), Positives = 75/127 (59%), Gaps = 8/127 (6%)
Frame = +3
Query: 159 PWIEKYRPQTFDDIVGNEDTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTILCLARALLGV 338
PW+EKYRP+ D+ E+ P+++ GPPG GKTTT L +A L G
Sbjct: 10 PWVEKYRPKQVKDVAHQEEV------------CPHMLFYGPPGTGKTTTALAIAHQLFGP 57
Query: 339 S-FKDAVLELNASNDRGIDVVRNKIKMFA-------QQKVTLPPGRHKIVILDEADSMTD 494
+K VLELNAS+DRGI+VVR KIK FA ++ P KI+ILDEADSMT+
Sbjct: 58 ELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSNHRQSGYPCPSFKIIILDEADSMTE 117
Query: 495 GAQQALR 515
AQ ALR
Sbjct: 118 DAQNALR 124
>At5g27740.1 68418.m03327 expressed protein
Length = 354
Score = 54.8 bits (126), Expect = 4e-08
Identities = 22/70 (31%), Positives = 39/70 (55%)
Frame = +3
Query: 162 WIEKYRPQTFDDIVGNEDTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTILCLARALLGVS 341
W++KYRP++ D ++ +ED +L + P+++ GP G GK T I+ L + + G S
Sbjct: 3 WVDKYRPKSLDKVIVHEDIAQKLKKLVSEQDCPHLLFYGPSGSGKKTLIMALLKQIYGAS 62
Query: 342 FKDAVLELNA 371
+ +E A
Sbjct: 63 AEKVKVENRA 72
Score = 27.1 bits (57), Expect = 9.1
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +1
Query: 517 RTMELYSSTTRFALAANNSEK 579
RTME YSS+ R L N+S K
Sbjct: 152 RTMEKYSSSCRLILCCNSSSK 172
>At1g24290.1 68414.m03065 AAA-type ATPase family protein similar to
Werner helicase interacting protein [Homo sapiens]
GI:14349166; contains Pfam profiles PF00004: ATPase
family associated with various cellular activities
(AAA), PF00627: UBA/TS-N domain; contains
ATP/GTP-binding site motif A (P-loop)
Length = 525
Score = 49.6 bits (113), Expect = 1e-06
Identities = 38/136 (27%), Positives = 69/136 (50%), Gaps = 7/136 (5%)
Frame = +3
Query: 117 KKQVKPSSSKSTNLPWIEKYRPQTFDDIVGNEDTVSRLAVF---AKTGNAPNIIIAGPPG 287
K+ SSS + P E+ RP+T DD+VG + +S ++ ++ P+I+ GPPG
Sbjct: 88 KRHKLSSSSHRQHQPLSERMRPRTLDDVVGQDHLLSPSSLLRSAVESNRLPSIVFWGPPG 147
Query: 288 VGKTTTILCLARALLGVSFKDAVL----ELNASNDRGIDVVRNKIKMFAQQKVTLPPGRH 455
GKT+ +A++L+ S KD L L+A G+ VR+ ++ + +++ L +
Sbjct: 148 TGKTS----IAKSLIN-SSKDPSLYRFVSLSAVTS-GVKDVRDAVE--SAKRLNLEGRKR 199
Query: 456 KIVILDEADSMTDGAQ 503
++ +DE Q
Sbjct: 200 TVLFMDEVHRFNKSQQ 215
>At5g22010.1 68418.m02561 AAA-type ATPase family protein / BRCT
domain-containing protein contains Pfam profiles:
PF00533 BRCA1 C Terminus (BRCT) domain, PF00004 ATPase
family associated with various cellular activities (AAA)
Length = 956
Score = 48.4 bits (110), Expect = 3e-06
Identities = 38/113 (33%), Positives = 59/113 (52%), Gaps = 24/113 (21%)
Frame = +3
Query: 120 KQVKPSSSKS----TNLPWIEKYRPQTFDDIVGNEDTVSRL--------AVFAKTGNAPN 263
K+V P+ K+ T+LPW EKYRP+ ++IVGN+ V++L F TG+
Sbjct: 324 KKVPPAKGKNKIIETSLPWTEKYRPKVPNEIVGNQSLVTQLHNWLSHWHDQFGGTGSKGK 383
Query: 264 ------------IIIAGPPGVGKTTTILCLARALLGVSFKDAVLELNASNDRG 386
++++G PG+GKTT+ L +LG +E+NAS+ RG
Sbjct: 384 GKKLNDAGSKKAVLLSGTPGIGKTTSAK-LVSQMLGFQ----AVEVNASDSRG 431
>At1g14460.1 68414.m01715 DNA polymerase-related weak similarity to
DNA polymerase III holoenzyme tau subunit [Thermus
thermophilus] GI:2583049
Length = 1116
Score = 41.9 bits (94), Expect = 3e-04
Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +3
Query: 168 EKYRPQTFDDIVGNEDTVSRLAVFAKTGNAPNI-IIAGPPGVGKTTTILCLARAL 329
+KY+P FD+++G V L K G ++ + GP G GKT+T L+ AL
Sbjct: 426 QKYKPMFFDELIGQSIVVQSLMNAVKKGRVAHVYLFQGPRGTGKTSTARILSAAL 480
>At5g66130.1 68418.m08331 cell cycle checkpoint protein-related weak
similarity to cell cycle checkpoint protein RAD17 [Homo
sapiens] GI:4102916
Length = 599
Score = 41.1 bits (92), Expect = 5e-04
Identities = 26/75 (34%), Positives = 45/75 (60%), Gaps = 8/75 (10%)
Frame = +3
Query: 141 SKSTNLPWIEKYRPQTFDDIVGNEDTVSRLAV-------FAKTGNAPNI-IIAGPPGVGK 296
SK+T+L W++KYRP+T +++ ++ V + + F K G N+ ++ G GVGK
Sbjct: 87 SKNTDL-WVDKYRPRTLEELSVHKKKVDEVKLWFQESLDFLKNGLRNNVLLVTGQAGVGK 145
Query: 297 TTTILCLARALLGVS 341
+ TI L ++LGV+
Sbjct: 146 SATI-HLITSILGVT 159
>At4g24790.1 68417.m03550 expressed protein ; expression supported
by MPSS
Length = 815
Score = 40.3 bits (90), Expect = 0.001
Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +3
Query: 168 EKYRPQTFDDIVGNEDTVSRLAVFAKTGNAPNI-IIAGPPGVGKTTTILCLARAL 329
+K+RP++FD++VG E V L G ++ + GP G GKT+T A AL
Sbjct: 243 QKFRPKSFDELVGQEVVVKCLLSTILRGRITSVYLFHGPRGTGKTSTSKIFAAAL 297
>At2g02480.1 68415.m00187 DNA polymerase-related weak similarity to
DNA polymerase III holoenzyme tau subunit [Thermus
thermophilus] GI:2583049
Length = 1218
Score = 39.9 bits (89), Expect = 0.001
Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = +3
Query: 138 SSKSTNLPWIEKYRPQTFDDIVGNEDTVSRLAVFAKTGN-APNIIIAGPPGVGKTTTILC 314
S+ T + +KYRP F++++G V L K AP + GP G GKT+T
Sbjct: 443 STPETIRSFSQKYRPMFFEELIGQSIVVQSLMNAVKRSRIAPVYLFQGPRGTGKTSTARI 502
Query: 315 LARAL 329
+ AL
Sbjct: 503 FSAAL 507
>At5g45720.1 68418.m05621 hypothetical protein
Length = 900
Score = 39.5 bits (88), Expect = 0.002
Identities = 26/70 (37%), Positives = 36/70 (51%), Gaps = 3/70 (4%)
Frame = +3
Query: 129 KPSSSKST--NLPWIEKYRPQTFDDIVGNEDTVSRLA-VFAKTGNAPNIIIAGPPGVGKT 299
K SS K+T + + +KY P+TF D++G V L+ AK + GP G GKT
Sbjct: 332 KKSSRKNTRWHQSFTQKYAPRTFRDLLGQNLVVQALSNAIAKRRVGLLYVFHGPNGTGKT 391
Query: 300 TTILCLARAL 329
+ ARAL
Sbjct: 392 SCARVFARAL 401
>At1g04730.1 68414.m00469 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family ('A'TPases
'A'ssociated with diverse cellular 'A'ctivities)
Length = 954
Score = 39.1 bits (87), Expect = 0.002
Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Frame = +3
Query: 264 IIIAGPPGVGKTTTILCLARALLGVSFKDAVLELNASNDRGIDVVRNKIKMFAQQKVTLP 443
+++ G PG+GKTT + +A G V+E+NAS++R + +I Q
Sbjct: 348 LLLCGAPGLGKTT-LAHIAAKHCGYR----VVEINASDERSASAIETRILDVVQMNSVTA 402
Query: 444 PGRHKIVILDEAD-SMTDG 497
R K +++DE D ++ DG
Sbjct: 403 DSRPKCLVIDEIDGALGDG 421
Score = 28.3 bits (60), Expect = 4.0
Identities = 9/32 (28%), Positives = 20/32 (62%)
Frame = +3
Query: 162 WIEKYRPQTFDDIVGNEDTVSRLAVFAKTGNA 257
W++KY P +F +++ +E T + ++ K +A
Sbjct: 234 WVDKYSPSSFTELLSDEQTNREVLLWLKQWDA 265
>At1g73170.1 68414.m08466 expressed protein
Length = 666
Score = 38.7 bits (86), Expect = 0.003
Identities = 19/44 (43%), Positives = 31/44 (70%)
Frame = +3
Query: 261 NIIIAGPPGVGKTTTILCLARALLGVSFKDAVLELNASNDRGID 392
++++ GPPGVGKTT I +AR +LG ++ V+ ++ SN+ G D
Sbjct: 199 SLLLIGPPGVGKTTMIREVAR-MLGNDYEKRVMIVDTSNEIGGD 241
>At1g33290.1 68414.m04117 sporulation protein-related isoform
contains non-consensus AT-donor acceptor site at intron
6; similar to Stage III sporulation protein AA.
(Swiss-Prot:Q01367) [Bacillus subtilis]; similar to
SpoIIIAA (GI:1303904) [Bacillus subtilis]; similar to
stage III sporulation protein AA (GI:18145497)
[Clostridium perfringens str. 13]
Length = 379
Score = 38.3 bits (85), Expect = 0.004
Identities = 24/71 (33%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Frame = +3
Query: 261 NIIIAGPPGVGKTTTILCLARALLGVSFKDAVLELNASNDRG--IDVVRNKIKMFAQQKV 434
+I+ G PGVGKTT + +AR +L F+ V+ ++ SN+ G D+ + I + +V
Sbjct: 166 SILFVGRPGVGKTTVLREIAR-VLSDEFQKRVVIIDTSNEIGGDGDIPHSAIGGSRRMQV 224
Query: 435 TLPPGRHKIVI 467
P +HK++I
Sbjct: 225 PKPSLQHKVMI 235
>At5g49840.1 68418.m06172 ATP-dependent Clp protease ATP-binding
subunit ClpX, putative similar to CLP protease
regulatory subunit CLPX GI:2674203 from [Arabidopsis
thaliana]; non-consensus splice donor GC at exon 4;
non-consensus splice donor AA at exon 7
Length = 606
Score = 36.7 bits (81), Expect = 0.011
Identities = 25/78 (32%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
Frame = +3
Query: 261 NIIIAGPPGVGKTTTILCLARALLGVSFKDA-VLELNASNDRGIDVVRNKIKMFAQQKVT 437
N+++ GP G GKT LAR ++ V F A L + G DV K++
Sbjct: 264 NVLLLGPTGSGKTLLAKTLAR-IVNVPFAIADATSLTQAGYVGEDVESILYKLYVVSGCN 322
Query: 438 LPPGRHKIVILDEADSMT 491
+ + IV +DE D MT
Sbjct: 323 VEEAQRGIVYIDEVDKMT 340
>At4g18820.1 68417.m02778 expressed protein
Length = 1111
Score = 36.3 bits (80), Expect = 0.015
Identities = 21/55 (38%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +3
Query: 168 EKYRPQTFDDIVGNEDTVSRLA-VFAKTGNAPNIIIAGPPGVGKTTTILCLARAL 329
EKY P+TF D++G V L+ A+ + GP G GKT+ ARAL
Sbjct: 435 EKYTPKTFRDLLGQNLVVQALSNAVARRKLGLLYVFHGPNGTGKTSCARIFARAL 489
>At4g14370.1 68417.m02214 disease resistance protein (TIR-NBS-LRR
class), putative similar to zinc finger protein
(GI:15811367) [Arabidopsis thaliana]; similar to
TIR-NBS-LRR (GI:27466164) [Arabidopsis thaliana];
similar to disease resistance protein RPP1-WsB
(GI:3860165) [Arabidopsis thaliana]
Length = 1996
Score = 35.1 bits (77), Expect = 0.034
Identities = 29/84 (34%), Positives = 43/84 (51%), Gaps = 5/84 (5%)
Frame = +3
Query: 189 FDDIVGNE---DTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTILCLARALLGVSFKDA-- 353
FDD+VG E + + L A + I GP G+GKTT L LL SF+ +
Sbjct: 141 FDDMVGLEAHLEEMKYLLDLDYKDGAMIVGICGPAGIGKTTIARALYSLLLS-SFQLSCF 199
Query: 354 VLELNASNDRGIDVVRNKIKMFAQ 425
V L+ S++RG+D K+++ Q
Sbjct: 200 VENLSGSDNRGLDEYGFKLRLQEQ 223
>At1g33360.1 68414.m04129 ATP-dependent Clp protease ATP-binding
subunit ClpX, putative similar to CLP protease
regulatory subunit CLPX GI:2674203 from [Arabidopsis
thaliana]
Length = 656
Score = 35.1 bits (77), Expect = 0.034
Identities = 26/82 (31%), Positives = 38/82 (46%), Gaps = 1/82 (1%)
Frame = +3
Query: 261 NIIIAGPPGVGKTTTILCLARALLGVSFKDA-VLELNASNDRGIDVVRNKIKMFAQQKVT 437
N+++ GP G GKT LAR L+ V F A L + G DV K+ +
Sbjct: 310 NVLLMGPTGSGKTLLAKTLAR-LVNVPFVIADATTLTQAGYVGDDVESILHKLLTVAEFN 368
Query: 438 LPPGRHKIVILDEADSMTDGAQ 503
+ + IV +DE D +T A+
Sbjct: 369 VQAAQQGIVYIDEVDKITKKAE 390
>At5g53350.1 68418.m06630 ATP-dependent Clp protease ATP-binding
subunit ClpX1 (CLPX) identical to CLP protease
regulatory subunit CLPX GI:2674203 from [Arabidopsis
thaliana]
Length = 579
Score = 33.9 bits (74), Expect = 0.079
Identities = 26/82 (31%), Positives = 36/82 (43%), Gaps = 1/82 (1%)
Frame = +3
Query: 261 NIIIAGPPGVGKTTTILCLARALLGVSFKDA-VLELNASNDRGIDVVRNKIKMFAQQKVT 437
NI++ GP G GKT LAR + V F A L + G DV K+
Sbjct: 225 NILLMGPTGSGKTLLAKTLAR-FVNVPFVIADATTLTQAGYVGEDVESILYKLLTVADYN 283
Query: 438 LPPGRHKIVILDEADSMTDGAQ 503
+ + IV +DE D +T A+
Sbjct: 284 VAAAQQGIVYIDEVDKITKKAE 305
>At1g33290.2 68414.m04118 sporulation protein-related isoform
contains non-consensus AT-donor acceptor site at intron
6; similar to Stage III sporulation protein AA.
(Swiss-Prot:Q01367) [Bacillus subtilis]; similar to
SpoIIIAA (GI:1303904) [Bacillus subtilis]; similar to
stage III sporulation protein AA (GI:18145497)
[Clostridium perfringens str. 13]
Length = 303
Score = 33.9 bits (74), Expect = 0.079
Identities = 18/44 (40%), Positives = 28/44 (63%)
Frame = +3
Query: 261 NIIIAGPPGVGKTTTILCLARALLGVSFKDAVLELNASNDRGID 392
+I+ G PGVGKTT + +AR +L F+ V+ ++ SN+ G D
Sbjct: 166 SILFVGRPGVGKTTVLREIAR-VLSDEFQKRVVIIDTSNEIGGD 208
>At1g74310.1 68414.m08605 heat shock protein 101 (HSP101) identical
to heat shock protein 101 GI:6715468 GB:AAF26423 from
[Arabidopsis thaliana]
Length = 911
Score = 33.5 bits (73), Expect = 0.11
Identities = 21/79 (26%), Positives = 39/79 (49%), Gaps = 6/79 (7%)
Frame = +3
Query: 114 EKKQVKPSSSKSTNLPWIEKY------RPQTFDDIVGNEDTVSRLAVFAKTGNAPNIIIA 275
E K+V+ S+S TN ++ Y + D ++G ++ + R+ N ++
Sbjct: 148 EGKKVE-SASGDTNFQALKTYGRDLVEQAGKLDPVIGRDEEIRRVVRILSRRTKNNPVLI 206
Query: 276 GPPGVGKTTTILCLARALL 332
G PGVGKT + LA+ ++
Sbjct: 207 GEPGVGKTAVVEGLAQRIV 225
>At3g10420.2 68416.m01250 sporulation protein-related similar to
hypothetical proteins: GB:P51281 [Chloroplast Porphyra
purpurea], GB:BAA16982 [Synechocystis sp], GB:P49540
[Odontella sinensis], GB:AAB82669 [Chloroplast Cyanidium
caldarium]; similar to stage III sporulation protein AA
(GI:18145497) [Clostridium perfringens str. 13]; similar
to stage III sporulation protein AA (mutants block
sporulation after engulfment) (GI:22777578)
[Oceanobacillus iheyensis]
Length = 684
Score = 33.1 bits (72), Expect = 0.14
Identities = 18/44 (40%), Positives = 28/44 (63%)
Frame = +3
Query: 261 NIIIAGPPGVGKTTTILCLARALLGVSFKDAVLELNASNDRGID 392
+I++ G PGVGKTT I +AR +L + V+ ++ SN+ G D
Sbjct: 215 SILVIGSPGVGKTTLIREIAR-MLADEHRKRVVIVDTSNEIGGD 257
>At3g10420.1 68416.m01249 sporulation protein-related similar to
hypothetical proteins: GB:P51281 [Chloroplast Porphyra
purpurea], GB:BAA16982 [Synechocystis sp], GB:P49540
[Odontella sinensis], GB:AAB82669 [Chloroplast Cyanidium
caldarium]; similar to stage III sporulation protein AA
(GI:18145497) [Clostridium perfringens str. 13]; similar
to stage III sporulation protein AA (mutants block
sporulation after engulfment) (GI:22777578)
[Oceanobacillus iheyensis]
Length = 547
Score = 33.1 bits (72), Expect = 0.14
Identities = 18/44 (40%), Positives = 28/44 (63%)
Frame = +3
Query: 261 NIIIAGPPGVGKTTTILCLARALLGVSFKDAVLELNASNDRGID 392
+I++ G PGVGKTT I +AR +L + V+ ++ SN+ G D
Sbjct: 215 SILVIGSPGVGKTTLIREIAR-MLADEHRKRVVIVDTSNEIGGD 257
>At1g63880.1 68414.m07234 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1017
Score = 33.1 bits (72), Expect = 0.14
Identities = 25/68 (36%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
Frame = +3
Query: 189 FDDIVGNEDTVSRLAVFAKTGNAPN--IIIAGPPGVGKTTTILCLARALLGVSFKDAVLE 362
FD +VG E + + N + IAGP G+GKTT +ARAL G+ K L
Sbjct: 184 FDGMVGIEAHLREIKSLLDLDNVEVKIVAIAGPAGIGKTT----IARALYGLLSKRFQLS 239
Query: 363 LNASNDRG 386
N RG
Sbjct: 240 CFVDNLRG 247
>At3g04210.1 68416.m00445 disease resistance protein (TIR-NBS
class), putative domain signature TIR-NBS exists,
suggestive of a disease resistance protein.
Length = 531
Score = 32.7 bits (71), Expect = 0.18
Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Frame = +3
Query: 189 FDDIVGNEDTVSRLA--VFAKTGNAPNIIIAGPPGVGKTTTILCLAR 323
F D+VG ED + +L ++ + I I GPPG+GKT+ L R
Sbjct: 237 FSDLVGMEDHMKKLERMLYLDLNDVRMIGIWGPPGIGKTSIARVLFR 283
>At5g60340.1 68418.m07564 maoC-like dehydratase domain-containing
protein contains similarity to (R)-specific enoyl-CoA
hydratase PhaJ1 [Pseudomonas oleovorans]
gi|22506675|gb|AAM97601; contains Pfam domain PF01575:
MaoC like domain
Length = 337
Score = 32.3 bits (70), Expect = 0.24
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = +3
Query: 258 PNIIIAGPPGVGKTTTILCLARA 326
PN++I G PG GK+TT LA A
Sbjct: 14 PNLLITGTPGTGKSTTASALAEA 36
>At5g18370.1 68418.m02161 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1210
Score = 32.3 bits (70), Expect = 0.24
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
Frame = +3
Query: 174 YRP-QTFDDIVGNEDTVSRL--AVFAKTGNAPNIIIAGPPGVGKTT 302
Y P + FDD VG ++R+ + ++ + I I GPPG+GKTT
Sbjct: 225 YTPSRDFDDYVGIRPHITRINSLLCLESSDVRMIGILGPPGIGKTT 270
>At4g05540.1 68417.m00843 tRNA-splicing endonuclease positive
effector-related contains similarity to SEN1, a positive
effector of tRNA-splicing endonuclease [Saccharomyces
cerevisiae] gi|172574|gb|AAB63976
Length = 689
Score = 32.3 bits (70), Expect = 0.24
Identities = 19/57 (33%), Positives = 27/57 (47%)
Frame = +3
Query: 267 IIAGPPGVGKTTTILCLARALLGVSFKDAVLELNASNDRGIDVVRNKIKMFAQQKVT 437
+I GPPG G T T+ L ALL +S K V +N + V + +F + T
Sbjct: 134 LIWGPPGTGNTKTVATLLFALLSLSCKTVV--CTPTNTAVVAVASRLLALFKESSST 188
>At2g03670.1 68415.m00326 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family ('A'TPases
'A'ssociated with diverse cellular 'A'ctivities)
Length = 603
Score = 32.3 bits (70), Expect = 0.24
Identities = 28/91 (30%), Positives = 40/91 (43%), Gaps = 3/91 (3%)
Frame = +3
Query: 219 VSRLAVFAKTGNAP--NIIIAGPPGVGKTTTILCLARALLGVSFKDAVLEL-NASNDRGI 389
+ A F K G +P I++ GPPG KTT A A F + EL + G
Sbjct: 306 IKHSAAFVKMGISPMRGILLHGPPGCSKTTLAKAAANAAQASFFSLSCAELFSMYVGEGE 365
Query: 390 DVVRNKIKMFAQQKVTLPPGRHKIVILDEAD 482
++RN F + ++ P I+ DEAD
Sbjct: 366 ALLRN---TFQRARLASP----SIIFFDEAD 389
>At2g03270.1 68415.m00280 DNA-binding protein, putative similar to
Swiss-Prot:Q60560 DNA-binding protein SMUBP-2
(Immunoglobulin MU binding protein 2) (SMUBP-2) (Insulin
II gene enhancer-binding protein)(RIPE3B-binding complex
3B2 P110 subunit) (RIP-1)[Mesocricetus auratus];
identical to putative helicase (atpc-2 gene) cDNA
NCBI_gi:11191230
Length = 639
Score = 32.3 bits (70), Expect = 0.24
Identities = 31/113 (27%), Positives = 47/113 (41%), Gaps = 1/113 (0%)
Frame = +3
Query: 159 PWIEKYRPQTFDDIVGNEDTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTILCLARALLGV 338
P + K ++F N D + A+ + ++ GPPG GKTTT++ + L V
Sbjct: 173 PSVSKKDVKSFTPFNKNLDQSQKDAITKALSSKDVFLLHGPPGTGKTTTVVEI--VLQEV 230
Query: 339 SFKDAVLELNASNDRGIDVVRNKIKMFAQQKVTLPPGRHKIVILDEA-DSMTD 494
+L ASN V N ++ KV L H +L + DS D
Sbjct: 231 KRGSKILACAASN----IAVDNIVERLVPHKVKLVRVGHPARLLPQVLDSALD 279
>At2g25140.1 68415.m03007 heat shock protein 100, putative / HSP100,
putative / heat shock protein clpB, putative /
HSP100/ClpB, putative similar to HSP100/ClpB GI:9651530
[Phaseolus lunatus]
Length = 964
Score = 31.9 bits (69), Expect = 0.32
Identities = 17/55 (30%), Positives = 25/55 (45%)
Frame = +3
Query: 168 EKYRPQTFDDIVGNEDTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTILCLARALL 332
E R D ++G +D + R N +I G PGVGKT LA+ ++
Sbjct: 251 EMARRGKLDPVIGRDDEIRRCIQILCRRTKNNPVIIGEPGVGKTAIAEGLAQRIV 305
>At5g37140.1 68418.m04458 tRNA-splicing endonuclease positive
effector-related contains similarity to SEN1, a positive
effector of tRNA-splicing endonuclease [Saccharomyces
cerevisiae] gi|172574|gb|AAB63976
Length = 692
Score = 31.5 bits (68), Expect = 0.42
Identities = 18/51 (35%), Positives = 26/51 (50%)
Frame = +3
Query: 267 IIAGPPGVGKTTTILCLARALLGVSFKDAVLELNASNDRGIDVVRNKIKMF 419
+I GPPG GKT T+ L LL +S K V +N ++V + +F
Sbjct: 99 LIWGPPGTGKTKTVATLLFCLLKLSCKTVVCA--PTNTAIVEVTSRLLSLF 147
>At5g15450.1 68418.m01808 heat shock protein 100, putative / HSP100,
putative / heat shock protein clpB, putative /
HSP100/ClpB, putative similar to HSP100/ClpB GI:9651530
[Phaseolus lunatus]
Length = 968
Score = 31.5 bits (68), Expect = 0.42
Identities = 15/52 (28%), Positives = 24/52 (46%)
Frame = +3
Query: 177 RPQTFDDIVGNEDTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTILCLARALL 332
R D ++G +D + R N ++ G PGVGKT LA+ ++
Sbjct: 249 REGKLDPVIGRDDEIRRCIQILSRRTKNNPVLIGEPGVGKTAISEGLAQRIV 300
>At4g15570.1 68417.m02379 tRNA-splicing endonuclease positive
effector-related contains similarity to SEN1, a positive
effector of tRNA-splicing endonuclease [Saccharomyces
cerevisiae] gi|172574|gb|AAB63976
Length = 818
Score = 31.5 bits (68), Expect = 0.42
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +3
Query: 264 IIIAGPPGVGKTTTILCLARALL 332
++I GPPG GKT TIL + A++
Sbjct: 276 VLIQGPPGTGKTQTILSILGAIM 298
>At5g46470.1 68418.m05723 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1127
Score = 31.1 bits (67), Expect = 0.56
Identities = 18/49 (36%), Positives = 31/49 (63%), Gaps = 2/49 (4%)
Frame = +3
Query: 189 FDDIVGNEDTVSRLA--VFAKTGNAPNIIIAGPPGVGKTTTILCLARAL 329
F+D+VG ED +++++ + ++ + I GP G+GKTT +ARAL
Sbjct: 184 FEDLVGIEDHITKMSSLLHLESEEVRMVGIWGPSGIGKTT----IARAL 228
>At5g37150.1 68418.m04460 tRNA-splicing endonuclease positive
effector-related contains similarity to SEN1, a positive
effector of tRNA-splicing endonuclease [Saccharomyces
cerevisiae] gi|172574|gb|AAB63976
Length = 839
Score = 31.1 bits (67), Expect = 0.56
Identities = 18/57 (31%), Positives = 27/57 (47%)
Frame = +3
Query: 267 IIAGPPGVGKTTTILCLARALLGVSFKDAVLELNASNDRGIDVVRNKIKMFAQQKVT 437
+I GPPG GKT T+ L ALL + K V +N + V + +F + +
Sbjct: 246 LIWGPPGTGKTKTVATLLFALLKLRCKTVVCA--PTNTAIVQVASRLLSLFKENSTS 300
>At5g26860.1 68418.m03204 Lon protease homolog 2, mitochondrial
almost identical to Lon protease homolog 2
mitochondrial precursor SP:P93655, GI:1848290 from
[Arabidopsis thaliana]
Length = 940
Score = 31.1 bits (67), Expect = 0.56
Identities = 24/68 (35%), Positives = 32/68 (47%), Gaps = 8/68 (11%)
Frame = +3
Query: 177 RPQTF--DDIVGNEDTVSRLAVFAKTGNAPN------IIIAGPPGVGKTTTILCLARALL 332
R QT +D G D R+ F G I ++GPPGVGKT+ +ARAL
Sbjct: 423 RAQTILDEDHYGLSDVKERILEFIAVGRLRGTSQGKIICLSGPPGVGKTSIGRSIARALN 482
Query: 333 GVSFKDAV 356
F+ +V
Sbjct: 483 RKFFRFSV 490
>At4g14670.1 68417.m02255 heat shock protein 101, putative / HSP101,
putative similar to heat shock protein 101 GI:6715468
GB:AAF26423 from [Arabidopsis thaliana]
Length = 623
Score = 31.1 bits (67), Expect = 0.56
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = +3
Query: 192 DDIVGNEDTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTILCLARALL 332
D ++G + R+ N ++ G PGVGKT + LA+ +L
Sbjct: 144 DPVIGRHREIRRVIEVLSRRTKNNPVLIGEPGVGKTAVVEGLAQRIL 190
>At1g77620.1 68414.m09037 expressed protein
Length = 1151
Score = 31.1 bits (67), Expect = 0.56
Identities = 10/34 (29%), Positives = 22/34 (64%)
Frame = +3
Query: 120 KQVKPSSSKSTNLPWIEKYRPQTFDDIVGNEDTV 221
++ SS + N W++KY+P++ ++ GN ++V
Sbjct: 299 RESNDSSGQPCNRLWVDKYQPRSASEVCGNTESV 332
Score = 27.1 bits (57), Expect = 9.1
Identities = 19/48 (39%), Positives = 24/48 (50%)
Frame = +3
Query: 264 IIIAGPPGVGKTTTILCLARALLGVSFKDAVLELNASNDRGIDVVRNK 407
++I GP G GK+ I A+ FK +LE N S R VVR K
Sbjct: 388 LLIVGPAGSGKSAAIHACAKE---QGFK--ILESNTSECRSGTVVRQK 430
>At1g64110.2 68414.m07264 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family
Length = 829
Score = 31.1 bits (67), Expect = 0.56
Identities = 24/75 (32%), Positives = 34/75 (45%)
Frame = +3
Query: 264 IIIAGPPGVGKTTTILCLARALLGVSFKDAVLELNASNDRGIDVVRNKIKMFAQQKVTLP 443
I++ GPPG GKT +A+ G SF + + S G D +N +F P
Sbjct: 558 ILLFGPPGTGKTMLAKAIAKE-AGASFINVSMSTITSKWFGED-EKNVRALFTLASKVSP 615
Query: 444 PGRHKIVILDEADSM 488
I+ +DE DSM
Sbjct: 616 ----TIIFVDEVDSM 626
>At1g64110.1 68414.m07263 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family
Length = 824
Score = 31.1 bits (67), Expect = 0.56
Identities = 24/75 (32%), Positives = 34/75 (45%)
Frame = +3
Query: 264 IIIAGPPGVGKTTTILCLARALLGVSFKDAVLELNASNDRGIDVVRNKIKMFAQQKVTLP 443
I++ GPPG GKT +A+ G SF + + S G D +N +F P
Sbjct: 553 ILLFGPPGTGKTMLAKAIAKE-AGASFINVSMSTITSKWFGED-EKNVRALFTLASKVSP 610
Query: 444 PGRHKIVILDEADSM 488
I+ +DE DSM
Sbjct: 611 ----TIIFVDEVDSM 621
>At5g22370.1 68418.m02610 ATP-binding family protein contains Pfam
domain, PF03029: Conserved hypothetical ATP binding
protein
Length = 291
Score = 30.7 bits (66), Expect = 0.74
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +3
Query: 267 IIAGPPGVGKTTTILCLARALLGVSFKDAVLELNASND 380
++ GPPG GKTT +++ L + K A++ L+ +ND
Sbjct: 6 VVIGPPGSGKTTYCNGMSQFLSLMGRKVAIVNLDPAND 43
>At3g44400.1 68416.m04770 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1007
Score = 30.7 bits (66), Expect = 0.74
Identities = 17/45 (37%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Frame = +3
Query: 189 FDDIVGNEDTVSRLAVFAKTG--NAPNIIIAGPPGVGKTTTILCL 317
FDD VG + R + I I GPPG+GKTT C+
Sbjct: 210 FDDFVGMAAHMERTEQLLRLDLDEVRMIGILGPPGIGKTTIATCM 254
>At3g04220.1 68416.m00446 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 896
Score = 30.7 bits (66), Expect = 0.74
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = +3
Query: 189 FDDIVGNEDTVSRLAVFAK--TGNAPNIIIAGPPGVGKTT 302
FDD++G D + ++ + I I GPPGVGKTT
Sbjct: 234 FDDLIGMGDHMEKMKPLLDIDSDEMKTIGIWGPPGVGKTT 273
>At5g66005.2 68418.m08311 Expressed protein
Length = 164
Score = 30.3 bits (65), Expect = 0.98
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +3
Query: 249 GNAPNIIIAGPPGVGKTTTIL 311
G +++ GPPGVGKTT I+
Sbjct: 3 GTGKCLLVTGPPGVGKTTLIM 23
>At5g38340.1 68418.m04627 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1059
Score = 30.3 bits (65), Expect = 0.98
Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 6/82 (7%)
Frame = +3
Query: 189 FDDIVGNEDTVSRL-AVFAKTGNAPNII-IAGPPGVGKTTTILCLARAL---LGVS-FKD 350
FDD++G E + ++ ++ + N +I I GP G+GKTT L G+S F D
Sbjct: 228 FDDLIGMEAHMEKMKSLLSLHSNEVKMIGIWGPSGIGKTTIARVLYNRFSGDFGLSVFMD 287
Query: 351 AVLELNASNDRGIDVVRNKIKM 416
+ EL + G D K+ +
Sbjct: 288 NIKELMHTRPVGSDDYSAKLHL 309
>At5g37160.1 68418.m04461 tRNA-splicing endonuclease positive
effector-related contains similarity to SEN1, a positive
effector of tRNA-splicing endonuclease [Saccharomyces
cerevisiae] gi|172574|gb|AAB63976
Length = 871
Score = 30.3 bits (65), Expect = 0.98
Identities = 17/60 (28%), Positives = 29/60 (48%)
Frame = +3
Query: 267 IIAGPPGVGKTTTILCLARALLGVSFKDAVLELNASNDRGIDVVRNKIKMFAQQKVTLPP 446
+I GPPG GKT T+ L L+ + K V A + I V +++ +++ + P
Sbjct: 269 LIWGPPGTGKTKTVATLLSTLMQLKCKTVVC---APTNTTIVAVASRLLSLSKETIVCAP 325
>At4g04180.1 68417.m00593 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family
Length = 609
Score = 30.3 bits (65), Expect = 0.98
Identities = 33/105 (31%), Positives = 47/105 (44%), Gaps = 1/105 (0%)
Frame = +3
Query: 174 YRPQTFDDIVGNEDTVSRLAVFAKTGNAPN-IIIAGPPGVGKTTTILCLARALLGVSFKD 350
+ P+ +DDIV T S+ N P ++ GPPG GKT+ +A G+
Sbjct: 340 HSPEVYDDIV--RGTRSKFE-----SNRPRAVLFEGPPGTGKTSCARVIANQ-AGIPLLY 391
Query: 351 AVLELNASNDRGIDVVRNKIKMFAQQKVTLPPGRHKIVILDEADS 485
LE S G + R +F+Q LP G I+ LDE D+
Sbjct: 392 VPLEAVMSKYYG-ESERLLGAVFSQAN-ELPDG--AIIFLDEIDA 432
>At3g47730.1 68416.m05200 ABC transporter family protein AbcA,
Dictyostelium discoideum, DDU66526
Length = 983
Score = 30.3 bits (65), Expect = 0.98
Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +3
Query: 270 IAGPPGVGKTTTILCLARALLGVSFKDAVLELNA-SNDRGIDVVRNKIKMFAQ 425
+ GP G GKTTTI CL L V+ DA++ N+ + G+ +R I + Q
Sbjct: 562 LLGPNGAGKTTTINCLT-GLFPVTGGDALIYGNSIRSSVGMSNIRKMIGVCPQ 613
>At3g28610.1 68416.m03571 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 473
Score = 30.3 bits (65), Expect = 0.98
Identities = 31/91 (34%), Positives = 44/91 (48%), Gaps = 13/91 (14%)
Frame = +3
Query: 138 SSKSTNLPWIEKYRPQTFDDIVGN----EDTVSRLAVF-------AKTGNA--PNIIIAG 278
SSK++ +I+ P TF+ + + E ++ LA F K G A ++ G
Sbjct: 184 SSKTSFWRYIDFEHPATFETLAMDPKKKEQILNDLAAFNNGKDYYKKIGKAWKRGYLLYG 243
Query: 279 PPGVGKTTTILCLARALLGVSFKDAVLELNA 371
PPG GK+T I +A LL S D LEL A
Sbjct: 244 PPGTGKSTMIAAMAN-LLNYSIYD--LELTA 271
>At3g05780.1 68416.m00649 Lon protease, putative similar to Lon
protease homolog 2 SP:P93655
Length = 924
Score = 30.3 bits (65), Expect = 0.98
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +3
Query: 246 TGNAPNIIIAGPPGVGKTTTILCLARAL 329
T I ++GPPGVGKT+ +ARAL
Sbjct: 437 TSQGKIICLSGPPGVGKTSIGRSIARAL 464
>At1g16280.1 68414.m01949 DEAD/DEAH box helicase, putative similar
to gb|L13612 DEAD-box protein (dbp45A) from Drosophila
melanogaster and is a member of PF|00270 DEAD/DEAH box
helicase family
Length = 491
Score = 30.3 bits (65), Expect = 0.98
Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
Frame = +3
Query: 405 KIKMFAQQKVTLPP--GRHKIVILDEADSMTD-GAQQALRT 518
+IK+ + +PP R K ++LDEAD + D G Q LRT
Sbjct: 186 RIKVLLENNPDVPPVFSRTKFLVLDEADRVLDVGFQDELRT 226
>At4g28000.1 68417.m04016 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family
Length = 726
Score = 29.9 bits (64), Expect = 1.3
Identities = 24/75 (32%), Positives = 33/75 (44%)
Frame = +3
Query: 264 IIIAGPPGVGKTTTILCLARALLGVSFKDAVLELNASNDRGIDVVRNKIKMFAQQKVTLP 443
I++ GPPG GKT +A G SF + + S G D +N +F P
Sbjct: 451 ILLFGPPGTGKTMMAKAIANE-AGASFINVSMSTITSKWFGED-EKNVRALFTLAAKVSP 508
Query: 444 PGRHKIVILDEADSM 488
I+ +DE DSM
Sbjct: 509 ----TIIFVDEVDSM 519
>At1g16800.1 68414.m02018 tRNA-splicing endonuclease positive
effector-related contains similarity to SEN1, a positive
effector of tRNA-splicing endonuclease [Saccharomyces
cerevisiae] gi|172574|gb|AAB63976
Length = 1939
Score = 29.9 bits (64), Expect = 1.3
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +3
Query: 267 IIAGPPGVGKTTTILCLARALL 332
+I GPPG GKT TI+ + LL
Sbjct: 1128 LIQGPPGTGKTRTIVAIISGLL 1149
>At1g05460.1 68414.m00555 RNA helicase SDE3 (SDE3) identical to RNA
helicase SDE3 [Arabidopsis thaliana] GI:13811296
Length = 1002
Score = 29.9 bits (64), Expect = 1.3
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +3
Query: 207 NEDTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTIL 311
N + + + + AP +I GPPG GKT T++
Sbjct: 398 NAEQICSIEMVLGCKGAPPYVIHGPPGTGKTMTLV 432
>At5g57480.1 68418.m07183 AAA-type ATPase family protein contains
Pfam profile: PF00004 ATPase family
Length = 520
Score = 29.1 bits (62), Expect = 2.3
Identities = 22/69 (31%), Positives = 31/69 (44%), Gaps = 2/69 (2%)
Frame = +3
Query: 177 RPQTFDDIVGNEDTVSRLAVFAKTGNA--PNIIIAGPPGVGKTTTILCLARALLGVSFKD 350
+ Q DD+ +D + KTG A ++ GPPG GK++ I +A LG D
Sbjct: 212 KQQIMDDL---KDFAEGQVFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMAN-YLGYDIYD 267
Query: 351 AVLELNASN 377
L SN
Sbjct: 268 LELTEVHSN 276
>At5g38850.1 68418.m04699 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 986
Score = 29.1 bits (62), Expect = 2.3
Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 2/84 (2%)
Frame = +3
Query: 189 FDDIVGNEDTVSRLA--VFAKTGNAPNIIIAGPPGVGKTTTILCLARALLGVSFKDAVLE 362
FD VG E + L+ ++ + I GP G+GKTT L ++LL +F+ +
Sbjct: 175 FDAFVGLEFHIRELSSLLYLDYEQVRIVGICGPAGIGKTTIARAL-QSLLSSNFQRSCFM 233
Query: 363 LNASNDRGIDVVRNKIKMFAQQKV 434
N I + +K+ Q+++
Sbjct: 234 ENVRGSLNIGLDEYGLKLDLQERL 257
>At5g17970.1 68418.m02108 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 780
Score = 29.1 bits (62), Expect = 2.3
Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Frame = +3
Query: 189 FDDIVGNEDTVSRL-AVFAKTGNAPNII-IAGPPGVGKTTTILCLARALLGVSFKDAVLE 362
F+D++G E V+ L ++ N +I + GP G+GKTT L L + D L
Sbjct: 187 FEDLLGLEAHVANLKSMLGLESNEVKMIGVWGPAGIGKTTITRILYNQLSSSNDDDFQLF 246
Query: 363 LNASNDRG 386
+ N +G
Sbjct: 247 IFMENVKG 254
>At3g48870.1 68416.m05338 ATP-dependent Clp protease ATP-binding
subunit (ClpC) identical to AtClpC GI:5360574 from
[Arabidopsis thaliana]; contains Pfam profiles PF02861:
Clp amino terminal domain and PF02151: UvrB/uvrC motif
Length = 952
Score = 29.1 bits (62), Expect = 2.3
Identities = 19/72 (26%), Positives = 31/72 (43%), Gaps = 8/72 (11%)
Frame = +3
Query: 138 SSKSTNLPWIEKYRPQT--------FDDIVGNEDTVSRLAVFAKTGNAPNIIIAGPPGVG 293
SS ++ +P +E+Y D +VG + + R+ N + G PGVG
Sbjct: 269 SSGNSKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERMVQILARRTKNNPCLIGEPGVG 328
Query: 294 KTTTILCLARAL 329
KT LA+ +
Sbjct: 329 KTAIAEGLAQRI 340
>At5g18350.1 68418.m02159 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1193
Score = 28.7 bits (61), Expect = 3.0
Identities = 15/29 (51%), Positives = 20/29 (68%)
Frame = +3
Query: 243 KTGNAPNIIIAGPPGVGKTTTILCLARAL 329
++G+ I I GPPG+GKTT +ARAL
Sbjct: 210 ESGDVRMIGIVGPPGIGKTT----IARAL 234
>At4g25835.1 68417.m03716 AAA-type ATPase family protein contains
Pfam profile: PF00004 ATPase family
Length = 506
Score = 28.7 bits (61), Expect = 3.0
Identities = 26/79 (32%), Positives = 35/79 (44%), Gaps = 15/79 (18%)
Frame = +3
Query: 138 SSKSTNLPW--IEKYRPQTFD----DIVGNEDTVSRLAVFA-------KTGNA--PNIII 272
S S LPW + P TFD D V + + L FA +TG A ++
Sbjct: 183 SLDSRGLPWESVPFKHPSTFDTLAMDPVKKQQIMEDLKDFAECQSFYERTGRAWKRGYLL 242
Query: 273 AGPPGVGKTTTILCLARAL 329
GPPG GK++ I +A L
Sbjct: 243 YGPPGTGKSSMIAAMANYL 261
>At4g23940.1 68417.m03443 FtsH protease, putative contains
similarity to zinc dependent protease GI:7650138 from
[Arabidopsis thaliana]
Length = 946
Score = 28.7 bits (61), Expect = 3.0
Identities = 25/92 (27%), Positives = 39/92 (42%), Gaps = 2/92 (2%)
Frame = +3
Query: 234 VFAKTGNAP--NIIIAGPPGVGKTTTILCLARALLGVSFKDAVLELNASNDRGIDVVRNK 407
+F K G P +++ GPPG GKT +A GV F G+ R +
Sbjct: 454 LFDKMGIKPPHGVLLEGPPGCGKTLVAKAIA-GEAGVPFYQMAGSEFVEVLVGVGSARIR 512
Query: 408 IKMFAQQKVTLPPGRHKIVILDEADSMTDGAQ 503
+F + KV P ++ +DE D++ Q
Sbjct: 513 -DLFKRAKVNKP----SVIFIDEIDALATRRQ 539
>At4g19500.1 68417.m02868 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein. A false
intron was added between exons 2 and 3 to circumvent a
frameshift caused by a sequencing error, as per Blake
Meyers (bcmeyers@vegmail.ucdavis.edu)
Length = 1308
Score = 28.7 bits (61), Expect = 3.0
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Frame = +3
Query: 189 FDDIVGNEDTVSRLAVFA--KTGNAPNIIIAGPPGVGKTT 302
F DIVG E + ++ K+ A + I+GP G+GKTT
Sbjct: 180 FSDIVGIEAHLEAMSSILRLKSEKARMVGISGPSGIGKTT 219
>At4g11170.1 68417.m01809 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1095
Score = 28.7 bits (61), Expect = 3.0
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Frame = +3
Query: 189 FDDIVGNEDTVSRL-AVFAKTGNAPNII-IAGPPGVGKTTTILCLARALLGVSFKDAVLE 362
F+D+VG E ++++ ++ I+ I GP GVGKTT +ARAL ++ L
Sbjct: 181 FNDLVGMEAHIAKMESLLCLESQGVRIVGIWGPAGVGKTT----IARALYNQYHENFNLS 236
Query: 363 LNASNDR 383
+ N R
Sbjct: 237 IFMENVR 243
>At1g63730.1 68414.m07212 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 966
Score = 28.7 bits (61), Expect = 3.0
Identities = 26/87 (29%), Positives = 42/87 (48%), Gaps = 5/87 (5%)
Frame = +3
Query: 189 FDDIVGNEDTVSRLAVFAKTGNAPNIIIAG---PPGVGKTTTILCLARALLGVSFK-DAV 356
F+D+VG E + ++ N +I G P G+GKTT L + L SF+
Sbjct: 183 FEDMVGIEAHLQKMQSLLHLDNEDEAMIVGICGPSGIGKTTIARAL-HSRLSSSFQLTCF 241
Query: 357 LE-LNASNDRGIDVVRNKIKMFAQQKV 434
+E L S + G+D +K+ QQ++
Sbjct: 242 MENLKGSYNSGLD--EYGLKLCLQQQL 266
>At5g50920.1 68418.m06315 ATP-dependent Clp protease ATP-binding
subunit / ClpC almost identical to ClpC GI:2921158 from
[Arabidopsis thaliana]; contains Pfam profile PF02861:
Clp amino terminal domain; contains Pfam profile
PF00004: ATPase, AAA family; contains Pfam profile
PF02151: UvrB/uvrC motif
Length = 929
Score = 28.3 bits (60), Expect = 4.0
Identities = 19/71 (26%), Positives = 29/71 (40%), Gaps = 8/71 (11%)
Frame = +3
Query: 141 SKSTNLPWIEKYRPQT--------FDDIVGNEDTVSRLAVFAKTGNAPNIIIAGPPGVGK 296
S S +P +E+Y D +VG + + R+ N + G PGVGK
Sbjct: 249 SSSNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGK 308
Query: 297 TTTILCLARAL 329
T LA+ +
Sbjct: 309 TAIAEGLAQRI 319
>At5g47040.1 68418.m05797 Lon protease homolog 1, mitochondrial
(LON) identical to Lon protease homolog 1 mitochondrial
precursor SP:O64948 from [Arabidopsis thaliana]
Length = 888
Score = 28.3 bits (60), Expect = 4.0
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 258 PNIIIAGPPGVGKTTTILCLARAL 329
P + GPPGVGKT+ +A AL
Sbjct: 402 PVLCFVGPPGVGKTSLASSIAAAL 425
>At5g17740.1 68418.m02080 AAA-type ATPase family protein h-bcs1,
Homo sapiens, EMBL:AF026849 h-bcs1, Homo sapiens,
EMBL:AF026849 h-bcs1, Homo sapiens, EMBL:AF026849
contains Pfam profile: ATPase family PF00004
gene_id:K17E7.100 contains Pfam profile: ATPase family
PF00004
Length = 533
Score = 28.3 bits (60), Expect = 4.0
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = +3
Query: 183 QTFDDIVGNEDTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTILCLARAL 329
+ D VG +D R+ K G ++ GPPG GK++ + +A L
Sbjct: 225 EDLDRFVGRKDFYKRVGKAWKRG----YLLYGPPGTGKSSLVAAMANYL 269
>At5g06530.2 68418.m00737 ABC transporter family protein
Length = 691
Score = 28.3 bits (60), Expect = 4.0
Identities = 30/115 (26%), Positives = 49/115 (42%), Gaps = 5/115 (4%)
Frame = +3
Query: 114 EKKQVKPSSSKSTNLPWIEKYRPQTFDDIVGN-EDTVSRLAVFAKTGNA-PNIIIA--GP 281
E + KP LP K+R T+ ++ +V + + +G+ P ++A GP
Sbjct: 139 EAGKKKPKFQAEPTLPIFLKFRDVTYKVVIKKLTSSVEKEILTGISGSVNPGEVLALMGP 198
Query: 282 PGVGKTTTILCLARALLGVSFKDAVLELNASNDRGID-VVRNKIKMFAQQKVTLP 443
G GKTT + LA + S +V ND+ +++KI Q V P
Sbjct: 199 SGSGKTTLLSLLAGRISQSSTGGSV----TYNDKPYSKYLKSKIGFVTQDDVLFP 249
>At5g06530.1 68418.m00736 ABC transporter family protein
Length = 751
Score = 28.3 bits (60), Expect = 4.0
Identities = 30/115 (26%), Positives = 49/115 (42%), Gaps = 5/115 (4%)
Frame = +3
Query: 114 EKKQVKPSSSKSTNLPWIEKYRPQTFDDIVGN-EDTVSRLAVFAKTGNA-PNIIIA--GP 281
E + KP LP K+R T+ ++ +V + + +G+ P ++A GP
Sbjct: 139 EAGKKKPKFQAEPTLPIFLKFRDVTYKVVIKKLTSSVEKEILTGISGSVNPGEVLALMGP 198
Query: 282 PGVGKTTTILCLARALLGVSFKDAVLELNASNDRGID-VVRNKIKMFAQQKVTLP 443
G GKTT + LA + S +V ND+ +++KI Q V P
Sbjct: 199 SGSGKTTLLSLLAGRISQSSTGGSV----TYNDKPYSKYLKSKIGFVTQDDVLFP 249
>At4g15236.1 68417.m02335 ABC transporter family protein similar to
pleiotropic drug resistance like protein [Nicotiana
tabacum] GI:20522008, ABC1 protein [Nicotiana
plumbaginifolia] GI:14331118; contains Pfam profile
PF00005: ABC transporter
Length = 1388
Score = 28.3 bits (60), Expect = 4.0
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +3
Query: 267 IIAGPPGVGKTTTILCLARAL 329
++ GPPG GKTT +L L+ L
Sbjct: 166 LLLGPPGCGKTTLLLALSGRL 186
>At4g08450.1 68417.m01393 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1234
Score = 28.3 bits (60), Expect = 4.0
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = +3
Query: 189 FDDIVGNEDTVSRLAVFA--KTGNAPNIIIAGPPGVGKTTTILCLARAL 329
FD+ G ED + L++ ++ + I GP G+GKTT +ARAL
Sbjct: 178 FDEFFGIEDHIKELSLLLCLESEEVRMVGIWGPTGIGKTT----IARAL 222
>At1g67460.1 68414.m07681 hypothetical protein contains Pfam domain
PF03193: Protein of unknown function, DUF258
Length = 434
Score = 28.3 bits (60), Expect = 4.0
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = +3
Query: 267 IIAGPPGVGKTTTILCLARALLGVSFKDAVLELNASNDRGIDVVRN 404
+I GP GVGK++ I +L S+ +V E++ N RG RN
Sbjct: 252 VIVGPSGVGKSSLI-----NILRSSYDQSVGEVSHRNGRGKHTTRN 292
>At5g64580.1 68418.m08116 AAA-type ATPase family protein similar to
zinc dependent protease [Arabidopsis thaliana]
GI:7650138; contains Pfam profile PF00004: ATPase AAA
family
Length = 855
Score = 27.9 bits (59), Expect = 5.2
Identities = 27/103 (26%), Positives = 50/103 (48%), Gaps = 6/103 (5%)
Frame = +3
Query: 198 IVGNEDTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTILCLARALLGVSFKDAVLELNASN 377
I+ N++ ++ G +++ GPPG GKT LA+A+ G +A L A+N
Sbjct: 334 ILKNDEEFQNKGIYCPKG----VLLHGPPGTGKT----LLAKAIAG----EAGLPFFAAN 381
Query: 378 -----DRGIDVVRNKIK-MFAQQKVTLPPGRHKIVILDEADSM 488
+ + V +++K +FA + P I+ +DE D++
Sbjct: 382 GTDFVEMFVGVAASRVKDLFASSRSYAP----SIIFIDEIDAI 420
>At5g61730.1 68418.m07746 ABC transporter family protein contains
Pfam profile: PF00005 ABC transporter
Length = 940
Score = 27.9 bits (59), Expect = 5.2
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = +3
Query: 270 IAGPPGVGKTTTILCL 317
+ GP G GKTTTI CL
Sbjct: 554 LLGPNGAGKTTTISCL 569
>At5g61690.1 68418.m07740 ABC transporter family protein ABC
transport protein, Dictyostelium discoideum, PIR:T18288
Length = 954
Score = 27.9 bits (59), Expect = 5.2
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = +3
Query: 270 IAGPPGVGKTTTILCL 317
+ GP G GKTTTI CL
Sbjct: 540 LLGPNGAGKTTTISCL 555
>At5g17730.1 68418.m02079 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 470
Score = 27.9 bits (59), Expect = 5.2
Identities = 26/87 (29%), Positives = 35/87 (40%), Gaps = 15/87 (17%)
Frame = +3
Query: 114 EKKQVKPSSSKSTNLPW--IEKYRPQTFDDIVGNE----------DTVSRLAVFAKTGNA 257
E+K +K S L W + P TFD + NE D R F K
Sbjct: 183 ERKILKMYSYCCMYLKWQSVNLEHPSTFDTMAMNEELKRSVMGDLDRFIRRKDFYKRVGK 242
Query: 258 P---NIIIAGPPGVGKTTTILCLARAL 329
P ++ GPPG GKT+ + +A L
Sbjct: 243 PWKRGYLLYGPPGTGKTSLVAAIANYL 269
>At4g38510.2 68417.m05447 vacuolar ATP synthase subunit B, putative
/ V-ATPase B subunit, putative / vacuolar proton pump B
subunit, putative / V-ATPase 57 kDa subunit, putative
very strong similarity to SP|P11574 Vacuolar ATP
synthase subunit B (EC 3.6.3.14) (V-ATPase B subunit)
(Vacuolar proton pump B subunit) (V-ATPase 57 kDa
subunit) {Arabidopsis thaliana}; contains Pfam profiles
PF00006: ATP synthase alpha/beta family
nucleotide-binding domain, PF00306: ATP synthase ab C
terminal, PF02874: ATP synthase alpha/beta family
beta-barrel domain
Length = 487
Score = 27.9 bits (59), Expect = 5.2
Identities = 15/57 (26%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +3
Query: 339 SFKDAVLELNASNDRGID-VVRNKIKMFAQQKVTLPPGRHKIVILDEADSMTDGAQQ 506
S + L LN +ND I+ ++ +I + + + G+H +VIL + S D ++
Sbjct: 230 SMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALRE 286
>At4g38510.1 68417.m05446 vacuolar ATP synthase subunit B, putative
/ V-ATPase B subunit, putative / vacuolar proton pump B
subunit, putative / V-ATPase 57 kDa subunit, putative
very strong similarity to SP|P11574 Vacuolar ATP
synthase subunit B (EC 3.6.3.14) (V-ATPase B subunit)
(Vacuolar proton pump B subunit) (V-ATPase 57 kDa
subunit) {Arabidopsis thaliana}; contains Pfam profiles
PF00006: ATP synthase alpha/beta family
nucleotide-binding domain, PF00306: ATP synthase ab C
terminal, PF02874: ATP synthase alpha/beta family
beta-barrel domain
Length = 487
Score = 27.9 bits (59), Expect = 5.2
Identities = 15/57 (26%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +3
Query: 339 SFKDAVLELNASNDRGID-VVRNKIKMFAQQKVTLPPGRHKIVILDEADSMTDGAQQ 506
S + L LN +ND I+ ++ +I + + + G+H +VIL + S D ++
Sbjct: 230 SMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALRE 286
>At3g28580.1 68416.m03568 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 500
Score = 27.9 bits (59), Expect = 5.2
Identities = 25/81 (30%), Positives = 34/81 (41%), Gaps = 15/81 (18%)
Frame = +3
Query: 132 PSSSKSTNLPW--IEKYRPQTFDDIV----GNEDTVSRLAVFAKT-------GNA--PNI 266
P S N W + P TFD + E+ S L F+K+ G A
Sbjct: 184 PGQSHGNNSKWSHVTFEHPATFDTLAMEENKKEEIKSDLIKFSKSKDYYKKIGKAWKRGY 243
Query: 267 IIAGPPGVGKTTTILCLARAL 329
++ GPPG GK+T I +A L
Sbjct: 244 LLFGPPGTGKSTMIAAMANFL 264
>At3g03060.1 68416.m00302 AAA-type ATPase family protein contains a
ATP/GTP-binding site motif A (P-loop), PROSITE:PS00017
Length = 639
Score = 27.9 bits (59), Expect = 5.2
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +3
Query: 261 NIIIAGPPGVGKTTTILCLAR 323
NI++ GPPG GKT LAR
Sbjct: 399 NILLHGPPGTGKTMAARELAR 419
>At2g16870.1 68415.m01941 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1109
Score = 27.9 bits (59), Expect = 5.2
Identities = 26/80 (32%), Positives = 36/80 (45%), Gaps = 4/80 (5%)
Frame = +3
Query: 189 FDDIVGNEDTVSRLAVFAKTG-NAPNII-IAGPPGVGKTTTILCLARALLGVSFKDA--V 356
FD +VG E + + V + I+ I GP G+GKTT L LL F+ V
Sbjct: 182 FDGMVGIEAHLKEMEVLLDFDYDGVKIVGIFGPAGIGKTTIARALHSLLLFKKFQLTCFV 241
Query: 357 LELNASNDRGIDVVRNKIKM 416
L S GID K+++
Sbjct: 242 DNLRGSYPIGIDEYGLKLRL 261
>At1g76030.1 68414.m08827 vacuolar ATP synthase subunit B / V-ATPase
B subunit / vacuolar proton pump B subunit / V-ATPase 57
kDa subunit identical to SP|P11574 Vacuolar ATP synthase
subunit B (EC 3.6.3.14) (V-ATPase B subunit) (Vacuolar
proton pump B subunit) (V-ATPase 57 kDa subunit)
{Arabidopsis thaliana}
Length = 486
Score = 27.9 bits (59), Expect = 5.2
Identities = 15/57 (26%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +3
Query: 339 SFKDAVLELNASNDRGID-VVRNKIKMFAQQKVTLPPGRHKIVILDEADSMTDGAQQ 506
S + L LN +ND I+ ++ +I + + + G+H +VIL + S D ++
Sbjct: 229 SMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALRE 285
>At1g67120.1 68414.m07636 midasin-related similar to Midasin
(MIDAS-containing protein) (Swiss-Prot:Q12019)
[Saccharomyces cerevisiae]; similar to Midasin
(MIDAS-containing protein) (Swiss-Prot:Q9NU22) [Homo
sapiens]; contains Prosite PS00017: ATP/GTP-binding site
motif A (P-loop)
Length = 5336
Score = 27.9 bits (59), Expect = 5.2
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +3
Query: 264 IIIAGPPGVGKTTTILCLAR 323
I++ G PGVGKT+ IL L +
Sbjct: 1748 ILLEGSPGVGKTSLILALGK 1767
>At1g56520.1 68414.m06499 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 897
Score = 27.9 bits (59), Expect = 5.2
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 3/82 (3%)
Frame = +3
Query: 189 FDDIVGNEDTVSRLAVFA--KTGNAPNIIIAGPPGVGKTTTILCLARALLGVSFKDAVLE 362
FD +VG D + + K + I+GP G+GK+T L L + + ++
Sbjct: 183 FDGMVGLNDHLREMESLLDLKNDGVKIVGISGPAGIGKSTIATALHGRLSNMFQRTCFVD 242
Query: 363 -LNASNDRGIDVVRNKIKMFAQ 425
L S G+D R K+ + Q
Sbjct: 243 NLRESYKIGLDEYRLKLHLQQQ 264
>At1g20260.1 68414.m02529 vacuolar ATP synthase subunit B, putative
/ V-ATPase B subunit, putative / vacuolar proton pump B
subunit, putative / V-ATPase 57 kDa subunit, putative
strong similarity to SP|P11574 Vacuolar ATP synthase
subunit B (EC 3.6.3.14) (V-ATPase B subunit) (Vacuolar
proton pump B subunit) (V-ATPase 57 kDa subunit)
{Arabidopsis thaliana}; contains Pfam profiles PF00006:
ATP synthase alpha/beta family nucleotide-binding
domain, PF02874: ATP synthase alpha/beta family
beta-barrel domain
Length = 330
Score = 27.9 bits (59), Expect = 5.2
Identities = 15/57 (26%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +3
Query: 339 SFKDAVLELNASNDRGID-VVRNKIKMFAQQKVTLPPGRHKIVILDEADSMTDGAQQ 506
S + L LN +ND I+ ++ +I + + + G+H +VIL + S D ++
Sbjct: 230 SMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALRE 286
>At5g67630.1 68418.m08527 DNA helicase, putative similar to
RuvB-like DNA helicase reptin [Danio rerio] GI:27733814,
reptin [Drosophila melanogaster] GI:7243682
Length = 469
Score = 27.5 bits (58), Expect = 6.9
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +3
Query: 264 IIIAGPPGVGKTTTILCLARAL 329
I+IAG PG GKT + +A++L
Sbjct: 69 ILIAGQPGTGKTAIAMGMAKSL 90
>At5g66910.1 68418.m08434 disease resistance protein (CC-NBS-LRR
class), putative domain signature CC-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 815
Score = 27.5 bits (58), Expect = 6.9
Identities = 8/15 (53%), Positives = 13/15 (86%)
Frame = +3
Query: 264 IIIAGPPGVGKTTTI 308
++++GPPG GKTT +
Sbjct: 192 VVVSGPPGCGKTTLV 206
>At5g52090.1 68418.m06466 tRNA-splicing endonuclease positive
effector-related contains similarity to SEN1, a positive
effector of tRNA-splicing endonuclease [Saccharomyces
cerevisiae] gi|172574|gb|AAB63976
Length = 676
Score = 27.5 bits (58), Expect = 6.9
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +3
Query: 267 IIAGPPGVGKTTTILCLARALLGVSFKDAV 356
+I GPP GKT T+ L ALL + K V
Sbjct: 83 LIWGPPRTGKTKTVATLLFALLKLRCKTVV 112
>At5g50340.1 68418.m06235 DNA repair protein-related similar to RadA
[Pseudomonas aeruginosa] GI:1881700
Length = 491
Score = 27.5 bits (58), Expect = 6.9
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Frame = +3
Query: 249 GNAPN--IIIAGPPGVGKTTTILCLARALL-GVSFKDAVLELNASNDRGIDVVRNK 407
G AP I+I G PG+GK+T +L +A + G + L S + ++ + ++
Sbjct: 112 GLAPGSLILIGGDPGIGKSTLLLQIASIIAEGSELAEPAPVLYISGEESVEQIGSR 167
>At5g43470.2 68418.m05315 disease resistance protein (CC-NBS-LRR
class), putative domain signature CC-NBS-LRR exists,
suggestive of a disease resistance protein. Closest
Col-0 homolog to RPP8
Length = 908
Score = 27.5 bits (58), Expect = 6.9
Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +3
Query: 168 EKYRPQTFDDIVGNEDTVSRLAVFAKTGNAPNII-IAGPPGVGKTT 302
+ Y + D+VG E +V L + ++ IAG G+GKTT
Sbjct: 155 QTYPDSSESDLVGVEQSVKELVGHLVENDVHQVVSIAGMGGIGKTT 200
>At5g43470.1 68418.m05314 disease resistance protein (CC-NBS-LRR
class), putative domain signature CC-NBS-LRR exists,
suggestive of a disease resistance protein. Closest
Col-0 homolog to RPP8
Length = 908
Score = 27.5 bits (58), Expect = 6.9
Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +3
Query: 168 EKYRPQTFDDIVGNEDTVSRLAVFAKTGNAPNII-IAGPPGVGKTT 302
+ Y + D+VG E +V L + ++ IAG G+GKTT
Sbjct: 155 QTYPDSSESDLVGVEQSVKELVGHLVENDVHQVVSIAGMGGIGKTT 200
>At5g22330.1 68418.m02605 TATA box-binding protein-interacting
protein-related similar to TATA box-binding
protein-interacting protein SP:O35753 from [ Mus
musculus]
Length = 458
Score = 27.5 bits (58), Expect = 6.9
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +3
Query: 264 IIIAGPPGVGKTTTILCLARAL 329
+++AGPPG GKT L +++ L
Sbjct: 69 LLLAGPPGTGKTALALGISQEL 90
>At5g16930.1 68418.m01984 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family
Length = 644
Score = 27.5 bits (58), Expect = 6.9
Identities = 15/29 (51%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
Frame = +3
Query: 243 KTGNAP--NIIIAGPPGVGKTTTILCLAR 323
K AP NI+ GPPG GKT LAR
Sbjct: 392 KAHQAPFRNILFYGPPGTGKTMAARELAR 420
>At3g50940.1 68416.m05577 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 451
Score = 27.5 bits (58), Expect = 6.9
Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Frame = +3
Query: 180 PQTFDDIVGNEDT-VSRLAVFAKTGNA--PNIIIAGPPGVGKTTTILCLARAL 329
P+ ++V + D V R + + G A ++ GPPG GK++ I +A L
Sbjct: 219 PEVKKNLVEDLDRFVQRKGFYGRVGKAWKRGYLLYGPPGTGKSSLIAAIANHL 271
>At3g50930.1 68416.m05576 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 576
Score = 27.5 bits (58), Expect = 6.9
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = +3
Query: 219 VSRLAVFAKTGNA--PNIIIAGPPGVGKTTTILCLARALLGVSFKDAVLELNASND 380
V R + + G A ++ GPPG GK++ I +A L +F LEL A N+
Sbjct: 285 VKRRDFYKRVGKAWKRGYLLYGPPGTGKSSLIAAMANHL---NFDIYDLELTAVNN 337
>At3g05790.1 68416.m00650 Lon protease, putative similar to Lon
protease homolog 2 SP:P93655
Length = 942
Score = 27.5 bits (58), Expect = 6.9
Identities = 28/100 (28%), Positives = 41/100 (41%), Gaps = 6/100 (6%)
Frame = +3
Query: 246 TGNAPNIIIAGPPGVGKTTTILCLARAL------LGVSFKDAVLELNASNDRGIDVVRNK 407
T I ++GP GVGKT+ +ARAL V V E+ I + K
Sbjct: 446 TSQGKIICLSGPTGVGKTSIGRSIARALDRKFFRFSVGGLSDVAEIKGHRRTYIGAMPGK 505
Query: 408 IKMFAQQKVTLPPGRHKIVILDEADSMTDGAQQALRTHHG 527
+ + T P +V++DE D + +R HHG
Sbjct: 506 MVQCLKNVGTENP----LVLIDEIDKL------GVRGHHG 535
>At2g29940.1 68415.m03642 ABC transporter family protein similar to
ABC1 protein GI:14331118 from [Nicotiana
plumbaginifolia]
Length = 1426
Score = 27.5 bits (58), Expect = 6.9
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +3
Query: 267 IIAGPPGVGKTTTILCLARAL 329
++ GPPG GK+T +L LA L
Sbjct: 190 LLLGPPGSGKSTLLLALAGKL 210
>At1g72860.1 68414.m08427 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1163
Score = 27.5 bits (58), Expect = 6.9
Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Frame = +3
Query: 177 RPQTFDDIVGNEDTVSRLAVFAK--TGNAPNII-IAGPPGVGKTTTILCL 317
+P F DIVG + RL+ + N +I I G G+GKTT CL
Sbjct: 177 QPVDFSDIVGMNAHMERLSPLLSMDSENEVRMIGIWGMGGIGKTTIAKCL 226
>At1g63740.1 68414.m07213 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 992
Score = 27.5 bits (58), Expect = 6.9
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
Frame = +3
Query: 189 FDDIVGNEDTVSRLAVFAKTGNAPNIIIAG---PPGVGKTTTILCLARAL 329
F+D+VG E + ++ N +I G P G+GKTT +ARAL
Sbjct: 141 FEDMVGVETHLEKIQSLLHLDNDDEAMIVGIYGPAGIGKTT----IARAL 186
>At1g31540.1 68414.m03869 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 776
Score = 27.5 bits (58), Expect = 6.9
Identities = 14/52 (26%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Frame = +3
Query: 180 PQTFDDIVGNEDTVSRLAVFAK--TGNAPNIIIAGPPGVGKTTTILCLARAL 329
P+ +++VG ED ++ +++ + + + I+G G+GKTT L + L
Sbjct: 177 PKDSEELVGIEDHIAEMSLLLQLESKEVRMVGISGSSGIGKTTIARALFKRL 228
>At1g06720.1 68414.m00714 expressed protein contains Pfam domain,
PF04950: Protein of unknown function (DUF663)
Length = 1147
Score = 27.5 bits (58), Expect = 6.9
Identities = 12/27 (44%), Positives = 17/27 (62%), Gaps = 2/27 (7%)
Frame = +3
Query: 249 GNAPN--IIIAGPPGVGKTTTILCLAR 323
G AP +++ GPPGVGK+ I L +
Sbjct: 79 GEAPPFVVVVQGPPGVGKSLVIKSLVK 105
>At5g62830.1 68418.m07886 F-box family protein-related similar to
F-box protein family, AtFBX9 (GI:20197985) [Arabidopsis
thaliana]; contains TIGRFAM TIGR01640 : F-box protein
interaction domain
Length = 204
Score = 27.1 bits (57), Expect = 9.1
Identities = 13/27 (48%), Positives = 15/27 (55%), Gaps = 2/27 (7%)
Frame = +2
Query: 275 WTSWCWK--NDDYTMLSASSPRSIFQR 349
W SW K NDDY++LS FQR
Sbjct: 40 WVSWIEKGDNDDYSLLSFDFSTERFQR 66
>At5g41740.1 68418.m05076 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1046
Score = 27.1 bits (57), Expect = 9.1
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Frame = +3
Query: 189 FDDIVGNEDTVSRL--AVFAKTGNAPNIIIAGPPGVGKTTTILCLARALLGVSFK 347
F+ +VG E + RL + ++ I I GP G+GKTT L L SF+
Sbjct: 173 FEGMVGMEAHLKRLNSLLCLESDEVKMIGIWGPAGIGKTTIARALFDDRLSSSFQ 227
>At5g40000.1 68418.m04851 AAA-type ATPase family protein BCS1
nuclear gene encoding mitochondrial protein - Homo
sapiens, EMBL:AF026849 contains Pfam profile: ATPase
family PF00004
Length = 470
Score = 27.1 bits (57), Expect = 9.1
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = +3
Query: 267 IIAGPPGVGKTTTILCLARALLGVSFKDAVLELNA 371
++ GPPG GK+T I +A LL + D LEL A
Sbjct: 245 LLYGPPGTGKSTMISAMAN-LLNYNIYD--LELTA 276
>At5g11250.1 68418.m01314 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1189
Score = 27.1 bits (57), Expect = 9.1
Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Frame = +3
Query: 114 EKKQVKPSSSKSTNLPWIEKYRPQTFDDIVGNEDTVSRLA--VFAKTGNAPNIIIAGPPG 287
E +K ++ +N+ I + FD +VG + ++ + T I I GPPG
Sbjct: 209 EAAMIKKIATDISNI-LINSTPSRDFDGLVGMRAHLEKMKPLLCLDTDEVRIIGIWGPPG 267
Query: 288 VGKTT 302
+GKTT
Sbjct: 268 IGKTT 272
>At4g36580.1 68417.m05193 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family ('A'TPases
'A'ssociated with diverse cellular 'A'ctivities)
Length = 620
Score = 27.1 bits (57), Expect = 9.1
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = +3
Query: 213 DTVSRLAVFAKTGNAP--NIIIAGPPGVGKTTTILCLAR 323
+ ++R K+ AP N++ GPPG GKT +AR
Sbjct: 354 ERLARATANTKSHQAPFRNMMFYGPPGTGKTMVAREIAR 392
>At4g30250.1 68417.m04301 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 512
Score = 27.1 bits (57), Expect = 9.1
Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Frame = +3
Query: 237 FAKTGNA--PNIIIAGPPGVGKTTTILCLARAL 329
+ KTG A ++ GPPG GK++ I +A L
Sbjct: 230 YQKTGRAWKRGYLLYGPPGTGKSSLIAAMANYL 262
>At4g26090.1 68417.m03756 disease resistance protein RPS2
(CC-NBS-LRR class), putative domain signature CC-NBS-LRR
exists, suggestive of a disease resistance protein.
identical to RPS2 (gi:13661831)
Length = 909
Score = 27.1 bits (57), Expect = 9.1
Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +3
Query: 198 IVGNEDTVSRLAVFAKTGNAPNII-IAGPPGVGKTTTILCLARALL 332
+VGN + ++ F II + GP GVGKTT + + L+
Sbjct: 155 VVGNTTMMEQVLEFLSEEEERGIIGVYGPGGVGKTTLMQSINNELI 200
>At4g24710.1 68417.m03536 AAA-type ATPase family protein similar to
HPV16 E1 protein binding protein [Homo sapiens]
gi|2232019|gb|AAB64095; contains Pfam domain, PF00004:
ATPase, AAA family ('A'TPases 'A'ssociated with diverse
cellular 'A'ctivities)
Length = 467
Score = 27.1 bits (57), Expect = 9.1
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +3
Query: 264 IIIAGPPGVGKTTTILCLARAL 329
I++ GPPG GKT+ LA+ L
Sbjct: 205 ILLHGPPGTGKTSLCKALAQKL 226
>At3g57550.1 68416.m06408 guanylate kinase 2 (GK-2) identical to
guanylate kinase (GK-2) [Arabidopsis thaliana]
gi|7861798|gb|AAF70409
Length = 389
Score = 27.1 bits (57), Expect = 9.1
Identities = 14/26 (53%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
Frame = +3
Query: 249 GNAPN-IIIAGPPGVGKTTTILCLAR 323
GNA I+I+GP GVGK T I L +
Sbjct: 134 GNAEKPIVISGPSGVGKGTLISMLMK 159
>At3g45790.1 68416.m04955 protein kinase-related contains eukaryotic
protein kinase domain, INTERPRO:IPR000719
Length = 376
Score = 27.1 bits (57), Expect = 9.1
Identities = 15/41 (36%), Positives = 19/41 (46%)
Frame = -2
Query: 346 LKDTPRRARAKHSIVVVFPTPGGPAIIMLGALPVLAKTAKR 224
L D P R ++S V+ P P I L P+L K KR
Sbjct: 25 LSDPPLTKRPRYSPSVIPPLPDQNPIFTLKLSPILLKNNKR 65
>At3g16290.1 68416.m02056 FtsH protease, putative contains
similarity to cell division protein FtsH GI:1652085 from
[Synechocystis sp. PCC 6803]
Length = 876
Score = 27.1 bits (57), Expect = 9.1
Identities = 22/77 (28%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Frame = +3
Query: 264 IIIAGPPGVGKTTTILCLARALLGVSFKDAVLELNASN--DRGIDVVRNKIKMFAQQKVT 437
I++ GPPGVGKT LA+A+ G + + ++AS + + V ++++ Q+
Sbjct: 446 ILLCGPPGVGKT----LLAKAVAGEAGVN-FFSISASQFVEIYVGVGASRVRALYQEARE 500
Query: 438 LPPGRHKIVILDEADSM 488
P +V +DE D++
Sbjct: 501 NAP---SVVFIDELDAV 514
>At2g41880.1 68415.m05179 guanylate kinase 1 (GK-1) identical to
guanylate kinase (GK-1) [Arabidopsis thaliana]
gi|7861795|gb|AAF70408
Length = 387
Score = 27.1 bits (57), Expect = 9.1
Identities = 14/26 (53%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
Frame = +3
Query: 249 GNAPN-IIIAGPPGVGKTTTILCLAR 323
GNA I+I+GP GVGK T I L +
Sbjct: 134 GNAEKPIVISGPSGVGKGTLISMLMK 159
>At2g37010.1 68415.m04539 ABC transporter family protein contains
ABC transporter domain, Pfam:PF00005
Length = 1063
Score = 27.1 bits (57), Expect = 9.1
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +3
Query: 270 IAGPPGVGKTTTILCLARALLGVSFKDAVLELNASND 380
+ GP G GKTT + LA G + + ++ +N ND
Sbjct: 497 VMGPSGAGKTTFLSALAGKATGCT-RTGLILINGRND 532
>At2g18330.1 68415.m02136 AAA-type ATPase family protein contains
Pfam profile: PF00004 ATPase family associated with
various cellular activities (AAA)
Length = 636
Score = 27.1 bits (57), Expect = 9.1
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = +3
Query: 213 DTVSRLAVFAKTGNAP--NIIIAGPPGVGKTTTILCLAR 323
+ ++R K+ AP N++ GPPG GKT +AR
Sbjct: 369 ERLARATANTKSHKAPFRNMMFYGPPGTGKTMVAREIAR 407
>At2g18193.1 68415.m02117 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 495
Score = 27.1 bits (57), Expect = 9.1
Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Frame = +3
Query: 210 EDTVSRLAVFAKTGNA--PNIIIAGPPGVGKTTTILCLARALLGVSFKDAVLELNASNDR 383
E + R + + G A ++ GPPG GK++ I +A L F LEL++ D
Sbjct: 226 ERFLKRKEFYKRVGKAWKRGYLLYGPPGTGKSSLIAAMANYL---KFDVFDLELSSIYDN 282
Query: 384 G 386
G
Sbjct: 283 G 283
>At1g65810.1 68414.m07468 tRNA-splicing endonuclease positive
effector-related contains similarity to SEN1, a positive
effector of tRNA-splicing endonuclease [Saccharomyces
cerevisiae] gi|172574|gb|AAB63976
Length = 1050
Score = 27.1 bits (57), Expect = 9.1
Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = +3
Query: 210 EDTVSRLAVFAKTGNAPNI-IIAGPPGVGKTTT 305
ED + R ++ NI +I GPPG GKT T
Sbjct: 272 EDAILRCLEAKSCNHSNNIKLIWGPPGTGKTKT 304
>At1g64070.1 68414.m07258 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 997
Score = 27.1 bits (57), Expect = 9.1
Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 4/83 (4%)
Frame = +3
Query: 189 FDDIVGNEDTVSRLAVFAKTGN--APNIIIAGPPGVGKTTTILCLARALLGVSFKDA--V 356
FD +VG E + ++ N + I+GP G+GK+T L +LL F V
Sbjct: 184 FDGMVGIEAHLRKIQSLLDLDNDEVKMVAISGPAGIGKSTIGRAL-HSLLSNRFHHTCFV 242
Query: 357 LELNASNDRGIDVVRNKIKMFAQ 425
L S+ G+D K+++ Q
Sbjct: 243 DNLRGSHPIGLDEYGLKLRLQEQ 265
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,730,713
Number of Sequences: 28952
Number of extensions: 198024
Number of successful extensions: 945
Number of sequences better than 10.0: 120
Number of HSP's better than 10.0 without gapping: 883
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 931
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1141585696
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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