BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bmov11e03 (632 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 07_03_0095 + 13346588-13346802,13346844-13346994,13348631-133488... 29 4.1 01_05_0444 + 22298490-22298598,22299847-22300108,22302420-223025... 29 4.1 04_04_0205 + 23591720-23591848,23592640-23592740,23592829-23593222 28 7.1 >07_03_0095 + 13346588-13346802,13346844-13346994,13348631-13348873, 13348942-13348986 Length = 217 Score = 28.7 bits (61), Expect = 4.1 Identities = 11/17 (64%), Positives = 15/17 (88%) Frame = -3 Query: 345 STECAESQSDRSNSDSI 295 + EC+E+ SDRSNS+SI Sbjct: 85 NAECSETSSDRSNSESI 101 >01_05_0444 + 22298490-22298598,22299847-22300108,22302420-22302516, 22302633-22302647,22302775-22302831,22303481-22303557, 22303688-22303967 Length = 298 Score = 28.7 bits (61), Expect = 4.1 Identities = 10/30 (33%), Positives = 19/30 (63%), Gaps = 1/30 (3%) Frame = -2 Query: 91 RKILLSAKNETDSIH-FVNHLYPCFHDRGN 5 R+I ++ DS++ +NH++P HD+ N Sbjct: 199 RQIWREGRDSEDSVYELINHVFPSLHDKNN 228 >04_04_0205 + 23591720-23591848,23592640-23592740,23592829-23593222 Length = 207 Score = 27.9 bits (59), Expect = 7.1 Identities = 13/43 (30%), Positives = 19/43 (44%) Frame = +3 Query: 120 LPLELTSEPLLHAQHVDINVDHLRXXXXXXXXHSKRT*ARRPD 248 +PL +LHA+ D+N H R H +R +R D Sbjct: 153 VPLRSVVTTVLHAEEKDVNKSHARRRTHSPDMHHQRKRSREDD 195 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 14,948,719 Number of Sequences: 37544 Number of extensions: 264235 Number of successful extensions: 468 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 459 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 468 length of database: 14,793,348 effective HSP length: 79 effective length of database: 11,827,372 effective search space used: 1549385732 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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