Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11e03
         (632 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_0095 + 13346588-13346802,13346844-13346994,13348631-133488...    29   4.1  
01_05_0444 + 22298490-22298598,22299847-22300108,22302420-223025...    29   4.1  
04_04_0205 + 23591720-23591848,23592640-23592740,23592829-23593222     28   7.1  

>07_03_0095 +
           13346588-13346802,13346844-13346994,13348631-13348873,
           13348942-13348986
          Length = 217

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 11/17 (64%), Positives = 15/17 (88%)
 Frame = -3

Query: 345 STECAESQSDRSNSDSI 295
           + EC+E+ SDRSNS+SI
Sbjct: 85  NAECSETSSDRSNSESI 101


>01_05_0444 +
           22298490-22298598,22299847-22300108,22302420-22302516,
           22302633-22302647,22302775-22302831,22303481-22303557,
           22303688-22303967
          Length = 298

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 10/30 (33%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
 Frame = -2

Query: 91  RKILLSAKNETDSIH-FVNHLYPCFHDRGN 5
           R+I    ++  DS++  +NH++P  HD+ N
Sbjct: 199 RQIWREGRDSEDSVYELINHVFPSLHDKNN 228


>04_04_0205 + 23591720-23591848,23592640-23592740,23592829-23593222
          Length = 207

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 13/43 (30%), Positives = 19/43 (44%)
 Frame = +3

Query: 120 LPLELTSEPLLHAQHVDINVDHLRXXXXXXXXHSKRT*ARRPD 248
           +PL      +LHA+  D+N  H R        H +R  +R  D
Sbjct: 153 VPLRSVVTTVLHAEEKDVNKSHARRRTHSPDMHHQRKRSREDD 195


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,948,719
Number of Sequences: 37544
Number of extensions: 264235
Number of successful extensions: 468
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 459
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 468
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1549385732
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)