Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11e03
         (632 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-469|AAF54119.1|  723|Drosophila melanogaster CG2330-PA ...   126   3e-29
AY094654-1|AAM11007.1|  919|Drosophila melanogaster AT12613p pro...    28   9.1  
AE014134-762|AAF50990.2|  919|Drosophila melanogaster CG11929-PA...    28   9.1  

>AE014297-469|AAF54119.1|  723|Drosophila melanogaster CG2330-PA
           protein.
          Length = 723

 Score =  126 bits (303), Expect = 3e-29
 Identities = 58/82 (70%), Positives = 66/82 (80%)
 Frame = +2

Query: 386 MGDVSEPIKKCILILKNARSDTEKFAALFMVTKLVKSKDCNSTAKKALFEAIGFQFLKKL 565
           M DV EP++KC  +LK  +SDTEKFAALFMVTKLVK KDCN+  KK LFEAIGF FLKKL
Sbjct: 1   MTDVPEPVRKCASLLKGTKSDTEKFAALFMVTKLVKGKDCNAAGKKLLFEAIGFPFLKKL 60

Query: 566 LTSNSVXDDCPPSVYKSVALSV 631
           L S  + +DCPP VYKSVALS+
Sbjct: 61  LVSKDLPNDCPPLVYKSVALSI 82


>AY094654-1|AAM11007.1|  919|Drosophila melanogaster AT12613p
           protein.
          Length = 919

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 6/51 (11%)
 Frame = +2

Query: 473 MVTKLVKSKDC-NSTAKKALFEAIGF-----QFLKKLLTSNSVXDDCPPSV 607
           +++   KSK C N+ A+ A  E+  F     +F+K    SNS+ +D P  V
Sbjct: 598 LISHFTKSKSCENNQAQNAQSESYSFDRLLPEFVKMFTRSNSLEEDRPKKV 648


>AE014134-762|AAF50990.2|  919|Drosophila melanogaster CG11929-PA
           protein.
          Length = 919

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 6/51 (11%)
 Frame = +2

Query: 473 MVTKLVKSKDC-NSTAKKALFEAIGF-----QFLKKLLTSNSVXDDCPPSV 607
           +++   KSK C N+ A+ A  E+  F     +F+K    SNS+ +D P  V
Sbjct: 598 LISHFTKSKSCENNQAQNAQSESYSFDRLLPEFVKMFTRSNSLEEDRPKKV 648


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,560,885
Number of Sequences: 53049
Number of extensions: 479516
Number of successful extensions: 941
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 899
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 938
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2641708800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)