BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bmov11e03 (632 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z73898-8|CAJ90496.1| 431|Caenorhabditis elegans Hypothetical pr... 32 0.39 Z73898-7|CAA98070.1| 577|Caenorhabditis elegans Hypothetical pr... 32 0.39 AL031629-1|CAA20974.1| 287|Caenorhabditis elegans Hypothetical ... 30 1.6 AF022971-2|AAG23980.1| 327|Caenorhabditis elegans Seven tm rece... 29 3.7 AF016448-2|AAB65957.1| 189|Caenorhabditis elegans Hypothetical ... 27 8.4 >Z73898-8|CAJ90496.1| 431|Caenorhabditis elegans Hypothetical protein ZK822.5b protein. Length = 431 Score = 31.9 bits (69), Expect = 0.39 Identities = 15/31 (48%), Positives = 19/31 (61%) Frame = +2 Query: 230 VSSTSRFSYFGREHTLIINVMWIESLFERSD 322 +S S +SY G L+I + WI SLFE SD Sbjct: 368 ISRISTYSYAGVGFVLMIIIGWIASLFEESD 398 >Z73898-7|CAA98070.1| 577|Caenorhabditis elegans Hypothetical protein ZK822.5a protein. Length = 577 Score = 31.9 bits (69), Expect = 0.39 Identities = 15/31 (48%), Positives = 19/31 (61%) Frame = +2 Query: 230 VSSTSRFSYFGREHTLIINVMWIESLFERSD 322 +S S +SY G L+I + WI SLFE SD Sbjct: 514 ISRISTYSYAGVGFVLMIIIGWIASLFEESD 544 >AL031629-1|CAA20974.1| 287|Caenorhabditis elegans Hypothetical protein Y106G6D.1 protein. Length = 287 Score = 29.9 bits (64), Expect = 1.6 Identities = 17/71 (23%), Positives = 35/71 (49%) Frame = +2 Query: 275 LIINVMWIESLFERSDCDSAHSVEPYCVL*ACRVLVTMGDVSEPIKKCILILKNARSDTE 454 LI+N+ W+E+ E +S H E C+ + + + +V + +KK + +K +++ Sbjct: 88 LIVNISWLETELEGRKAESIHK-ETICLRAENKHRLQLQEVEKEMKKMEMEIKFYQNENF 146 Query: 455 KFAALFMVTKL 487 + M T L Sbjct: 147 SLRRMMMETTL 157 >AF022971-2|AAG23980.1| 327|Caenorhabditis elegans Seven tm receptor protein 46 protein. Length = 327 Score = 28.7 bits (61), Expect = 3.7 Identities = 16/48 (33%), Positives = 26/48 (54%) Frame = -3 Query: 522 FFAVELQSLLFTSFVTINRAANFSVSLLAFFKMSMHFLIGSDTSPIVT 379 FF++ Q+ LF +++ A F + +LAFF + F S +PI T Sbjct: 75 FFSLNTQNSLFLVQISVAVYAGFYLFILAFFVVQFVFRYVSLVNPIST 122 >AF016448-2|AAB65957.1| 189|Caenorhabditis elegans Hypothetical protein F41E6.7 protein. Length = 189 Score = 27.5 bits (58), Expect = 8.4 Identities = 15/31 (48%), Positives = 20/31 (64%) Frame = -3 Query: 324 QSDRSNSDSIHITFIIRVCSLPK*LNLDVEL 232 +SD S+S +H +I VCSLP L LD+ L Sbjct: 28 KSDVSDS-KLHRDHVISVCSLPVVLRLDLSL 57 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 13,309,804 Number of Sequences: 27780 Number of extensions: 251726 Number of successful extensions: 564 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 547 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 564 length of database: 12,740,198 effective HSP length: 78 effective length of database: 10,573,358 effective search space used: 1395683256 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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