Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11e03
         (632 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z73898-8|CAJ90496.1|  431|Caenorhabditis elegans Hypothetical pr...    32   0.39 
Z73898-7|CAA98070.1|  577|Caenorhabditis elegans Hypothetical pr...    32   0.39 
AL031629-1|CAA20974.1|  287|Caenorhabditis elegans Hypothetical ...    30   1.6  
AF022971-2|AAG23980.1|  327|Caenorhabditis elegans Seven tm rece...    29   3.7  
AF016448-2|AAB65957.1|  189|Caenorhabditis elegans Hypothetical ...    27   8.4  

>Z73898-8|CAJ90496.1|  431|Caenorhabditis elegans Hypothetical
           protein ZK822.5b protein.
          Length = 431

 Score = 31.9 bits (69), Expect = 0.39
 Identities = 15/31 (48%), Positives = 19/31 (61%)
 Frame = +2

Query: 230 VSSTSRFSYFGREHTLIINVMWIESLFERSD 322
           +S  S +SY G    L+I + WI SLFE SD
Sbjct: 368 ISRISTYSYAGVGFVLMIIIGWIASLFEESD 398


>Z73898-7|CAA98070.1|  577|Caenorhabditis elegans Hypothetical
           protein ZK822.5a protein.
          Length = 577

 Score = 31.9 bits (69), Expect = 0.39
 Identities = 15/31 (48%), Positives = 19/31 (61%)
 Frame = +2

Query: 230 VSSTSRFSYFGREHTLIINVMWIESLFERSD 322
           +S  S +SY G    L+I + WI SLFE SD
Sbjct: 514 ISRISTYSYAGVGFVLMIIIGWIASLFEESD 544


>AL031629-1|CAA20974.1|  287|Caenorhabditis elegans Hypothetical
           protein Y106G6D.1 protein.
          Length = 287

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 17/71 (23%), Positives = 35/71 (49%)
 Frame = +2

Query: 275 LIINVMWIESLFERSDCDSAHSVEPYCVL*ACRVLVTMGDVSEPIKKCILILKNARSDTE 454
           LI+N+ W+E+  E    +S H  E  C+    +  + + +V + +KK  + +K  +++  
Sbjct: 88  LIVNISWLETELEGRKAESIHK-ETICLRAENKHRLQLQEVEKEMKKMEMEIKFYQNENF 146

Query: 455 KFAALFMVTKL 487
               + M T L
Sbjct: 147 SLRRMMMETTL 157


>AF022971-2|AAG23980.1|  327|Caenorhabditis elegans Seven tm
           receptor protein 46 protein.
          Length = 327

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 16/48 (33%), Positives = 26/48 (54%)
 Frame = -3

Query: 522 FFAVELQSLLFTSFVTINRAANFSVSLLAFFKMSMHFLIGSDTSPIVT 379
           FF++  Q+ LF   +++   A F + +LAFF +   F   S  +PI T
Sbjct: 75  FFSLNTQNSLFLVQISVAVYAGFYLFILAFFVVQFVFRYVSLVNPIST 122


>AF016448-2|AAB65957.1|  189|Caenorhabditis elegans Hypothetical
           protein F41E6.7 protein.
          Length = 189

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 15/31 (48%), Positives = 20/31 (64%)
 Frame = -3

Query: 324 QSDRSNSDSIHITFIIRVCSLPK*LNLDVEL 232
           +SD S+S  +H   +I VCSLP  L LD+ L
Sbjct: 28  KSDVSDS-KLHRDHVISVCSLPVVLRLDLSL 57


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,309,804
Number of Sequences: 27780
Number of extensions: 251726
Number of successful extensions: 564
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 547
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 564
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1395683256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)