Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11e02
         (649 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY183376-1|AAO24766.1|  128|Anopheles gambiae cytochrome b5 prot...   148   2e-37
AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr...    24   4.8  
AJ302662-1|CAC35527.1|   76|Anopheles gambiae gSG9 protein protein.    23   6.3  

>AY183376-1|AAO24766.1|  128|Anopheles gambiae cytochrome b5
           protein.
          Length = 128

 Score =  148 bits (358), Expect = 2e-37
 Identities = 64/125 (51%), Positives = 92/125 (73%)
 Frame = +2

Query: 170 EMKLFTREELKSRSTRADAVLIIHNEVYDVTKFLLEHPGGEEVLLEKAGQDASEPFEDVS 349
           E+K ++  ++KS +T     ++IHN++YDVT+FL EHPGGEEVLLE+AG++A+E FEDV 
Sbjct: 3   EVKTYSLADVKSHNTNKSTWIVIHNDIYDVTEFLNEHPGGEEVLLEQAGREATEAFEDVG 62

Query: 350 HSSDARSLMKKYKIGELVESDRVQTRAGFSPQWTNEQAQEQGNWSSWLTPLLLGVAATLL 529
           HSSDAR +MKK+K+GEL+E++R Q      P W  +Q Q+      W+ PL+LG+ AT+L
Sbjct: 63  HSSDAREMMKKFKVGELIEAERKQIPVKKEPDWKMDQ-QDDNQLKQWIVPLILGLLATIL 121

Query: 530 YRYLF 544
           YR+ F
Sbjct: 122 YRFYF 126


>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
           protein.
          Length = 1253

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -2

Query: 483 LQLPCSCACSLVHCGLKPARVC 418
           L +P +    LV CGL+ A VC
Sbjct: 68  LAVPVTVTLLLVFCGLREADVC 89


>AJ302662-1|CAC35527.1|   76|Anopheles gambiae gSG9 protein protein.
          Length = 76

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 11/26 (42%), Positives = 18/26 (69%)
 Frame = -1

Query: 646 RNSCSIFFIKFVSSYISKIQSSEVAS 569
           R+ CS FF ++   Y+S+  SS++AS
Sbjct: 20  RHQCSPFFFQYNRPYLSQ-PSSQLAS 44


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 577,001
Number of Sequences: 2352
Number of extensions: 9303
Number of successful extensions: 19
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63977715
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)