Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11d22
         (532 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    23   1.7  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   2.2  
AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein pr...    22   3.9  

>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 23.0 bits (47), Expect = 1.7
 Identities = 12/42 (28%), Positives = 17/42 (40%)
 Frame = -1

Query: 505 CFVKLQVFR*YNKIIVDNVXHISVYWFLCVRIVLRLYFWNFN 380
           C  +  V   Y KI+ D    I V  F C  + L L  +  +
Sbjct: 231 CIEQYNVILRYTKIVSDTYQGILVVQFFCSLVALCLTMYKLS 272


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = -1

Query: 217  VRQLSISIGLIQRLDLNWYSDLRGCG 140
            V+ L +  G++  LDL+ + +  GCG
Sbjct: 2650 VKALKLGGGMVWALDLDDFKNRCGCG 2675



 Score = 21.8 bits (44), Expect = 3.9
 Identities = 8/25 (32%), Positives = 16/25 (64%)
 Frame = -1

Query: 217  VRQLSISIGLIQRLDLNWYSDLRGC 143
            ++ + +  G+I  LDL+ + +L GC
Sbjct: 2152 IKAMGLGGGMIWALDLDDFKNLCGC 2176


>AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein
           protein.
          Length = 203

 Score = 21.8 bits (44), Expect = 3.9
 Identities = 11/34 (32%), Positives = 15/34 (44%)
 Frame = +2

Query: 221 YTPSKNIPCNQLATAQNYVASNNQYQPLISSINP 322
           Y PS        + ++N   S+N Y P I S  P
Sbjct: 37  YEPSCQYSPVSNSDSENSEVSSNSYTPKIKSCRP 70


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,228
Number of Sequences: 336
Number of extensions: 1982
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12887571
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)