Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11d22
         (532 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT030114-1|ABN49253.1|  342|Drosophila melanogaster IP08073p pro...    31   0.74 
AY075500-1|AAL68310.1|  293|Drosophila melanogaster RE51713p pro...    28   6.9  
AE014297-321|AAF51976.1|  293|Drosophila melanogaster CG1245-PA ...    28   6.9  

>BT030114-1|ABN49253.1|  342|Drosophila melanogaster IP08073p
           protein.
          Length = 342

 Score = 31.5 bits (68), Expect = 0.74
 Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 5/62 (8%)
 Frame = +2

Query: 362 SPHVHRVEVPEVK-PQ-HNPDAKEPINTNVP---HVVNNYFIVSPEYLKLNETVFKKVKD 526
           SP +H    P++  P+ H P++KEPI   +P   H++N   I  P+  K++     K+ +
Sbjct: 246 SPKIHIPGAPKINDPKIHIPESKEPILPKIPETDHLINEDLIRKPQSPKIHIPETPKIIE 305

Query: 527 KK 532
            K
Sbjct: 306 PK 307


>AY075500-1|AAL68310.1|  293|Drosophila melanogaster RE51713p
           protein.
          Length = 293

 Score = 28.3 bits (60), Expect = 6.9
 Identities = 14/52 (26%), Positives = 24/52 (46%)
 Frame = +2

Query: 215 NTYTPSKNIPCNQLATAQNYVASNNQYQPLISSINPNEIVKVILSRVLTSPH 370
           +++    N+  N L  + NY +   Q  P  S  N  + +  +LS + T PH
Sbjct: 109 HSFLAFNNLNQNTLRRSYNYCSQKRQRLPFSSFNNDPDHIDKLLSEINTPPH 160


>AE014297-321|AAF51976.1|  293|Drosophila melanogaster CG1245-PA
           protein.
          Length = 293

 Score = 28.3 bits (60), Expect = 6.9
 Identities = 14/52 (26%), Positives = 24/52 (46%)
 Frame = +2

Query: 215 NTYTPSKNIPCNQLATAQNYVASNNQYQPLISSINPNEIVKVILSRVLTSPH 370
           +++    N+  N L  + NY +   Q  P  S  N  + +  +LS + T PH
Sbjct: 109 HSFLAFNNLNQNTLRRSYNYCSQKRQRLPFSSFNNDPDHIDKLLSEINTPPH 160


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,955,745
Number of Sequences: 53049
Number of extensions: 341548
Number of successful extensions: 844
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 827
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 844
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1991467008
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)