Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov11d22
(532 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex det... 24 0.84
DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex det... 24 0.84
DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex det... 24 0.84
DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex det... 24 0.84
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 24 0.84
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 24 0.84
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 24 0.84
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 24 0.84
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 23 1.5
DQ435328-1|ABD92643.1| 143|Apis mellifera OBP11 protein. 21 7.9
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 21 7.9
AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamat... 21 7.9
AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellif... 21 7.9
>DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 24.2 bits (50), Expect = 0.84
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +2
Query: 248 NQLATAQNYVASNNQYQPLISSINPNEIVKV 340
+ L+ NY NN Y+PL +IN E + V
Sbjct: 83 SSLSNNYNYNNYNNNYKPLYYNINYIEQIPV 113
>DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 24.2 bits (50), Expect = 0.84
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +2
Query: 248 NQLATAQNYVASNNQYQPLISSINPNEIVKV 340
+ L+ NY NN Y+PL +IN E + V
Sbjct: 83 SSLSNNYNYNNYNNNYKPLYYNINYIEQIPV 113
>DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 24.2 bits (50), Expect = 0.84
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +2
Query: 248 NQLATAQNYVASNNQYQPLISSINPNEIVKV 340
+ L+ NY NN Y+PL +IN E + V
Sbjct: 83 SSLSNNYNYNNYNNNYKPLYYNINYIEQIPV 113
>DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 24.2 bits (50), Expect = 0.84
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +2
Query: 248 NQLATAQNYVASNNQYQPLISSINPNEIVKV 340
+ L+ NY NN Y+PL +IN E + V
Sbjct: 83 SSLSNNYNYNNYNNNYKPLYYNINYIEQIPV 113
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 24.2 bits (50), Expect = 0.84
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +2
Query: 248 NQLATAQNYVASNNQYQPLISSINPNEIVKV 340
+ L+ NY NN Y+PL +IN E + V
Sbjct: 316 SSLSNNYNYNNYNNNYKPLYYNINYIEQIPV 346
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 24.2 bits (50), Expect = 0.84
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +2
Query: 248 NQLATAQNYVASNNQYQPLISSINPNEIVKV 340
+ L+ NY NN Y+PL +IN E + V
Sbjct: 316 SSLSNNYNYNNYNNNYKPLYYNINYIEQIPV 346
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 24.2 bits (50), Expect = 0.84
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +2
Query: 248 NQLATAQNYVASNNQYQPLISSINPNEIVKV 340
+ L+ NY NN Y+PL +IN E + V
Sbjct: 316 SSLSNNYNYNNYNNNYKPLYYNINYIEQIPV 346
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 24.2 bits (50), Expect = 0.84
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +2
Query: 248 NQLATAQNYVASNNQYQPLISSINPNEIVKV 340
+ L+ NY NN Y+PL +IN E + V
Sbjct: 305 SSLSNNYNYNNYNNNYKPLYYNINYIEQIPV 335
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 23.4 bits (48), Expect = 1.5
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +2
Query: 248 NQLATAQNYVASNNQYQPLISSINPNEIVKV 340
+ L+ NY NN Y+PL +IN E + V
Sbjct: 316 SSLSNNYNYNNYNNNYKPLHYNINYIEQIPV 346
>DQ435328-1|ABD92643.1| 143|Apis mellifera OBP11 protein.
Length = 143
Score = 21.0 bits (42), Expect = 7.9
Identities = 6/13 (46%), Positives = 11/13 (84%)
Frame = -1
Query: 442 ISVYWFLCVRIVL 404
+S+YW+L ++I L
Sbjct: 9 VSLYWYLILQIAL 21
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 21.0 bits (42), Expect = 7.9
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +2
Query: 248 NQLATAQNYVASNNQYQPLISSI 316
+ L+ NY NN Y+PL +I
Sbjct: 316 SSLSNNYNYNNYNNNYKPLYYNI 338
>AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamate
receptor 1 protein.
Length = 843
Score = 21.0 bits (42), Expect = 7.9
Identities = 6/15 (40%), Positives = 9/15 (60%)
Frame = -3
Query: 239 CFWMACKC*TAEYIH 195
C W+ +C EY+H
Sbjct: 466 CCWVCDQCEEYEYVH 480
>AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellifera
ORF for hypotheticalprotein. ).
Length = 998
Score = 21.0 bits (42), Expect = 7.9
Identities = 7/17 (41%), Positives = 12/17 (70%)
Frame = +2
Query: 404 QHNPDAKEPINTNVPHV 454
+HNP K+ + + VPH+
Sbjct: 91 KHNPRGKDALWSLVPHM 107
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,748
Number of Sequences: 438
Number of extensions: 2708
Number of successful extensions: 13
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14968302
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -