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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11d19
         (540 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g21130.1 68415.m02507 peptidyl-prolyl cis-trans isomerase / c...   244   3e-65
At4g38740.1 68417.m05487 peptidyl-prolyl cis-trans isomerase / c...   243   7e-65
At2g16600.1 68415.m01906 peptidyl-prolyl cis-trans isomerase, cy...   229   1e-60
At4g34870.1 68417.m04946 peptidyl-prolyl cis-trans isomerase / c...   228   2e-60
At2g29960.1 68415.m03644 peptidyl-prolyl cis-trans isomerase / c...   224   3e-59
At3g56070.1 68416.m06231 peptidyl-prolyl cis-trans isomerase, pu...   223   4e-59
At5g58710.1 68418.m07355 peptidyl-prolyl cis-trans isomerase, pu...   223   8e-59
At3g62030.1 68416.m06967 peptidyl-prolyl cis-trans isomerase, ch...   219   7e-58
At5g13120.1 68418.m01503 peptidyl-prolyl cis-trans isomerase cyc...   218   2e-57
At3g55920.1 68416.m06214 peptidyl-prolyl cis-trans isomerase, pu...   215   1e-56
At3g63400.2 68416.m07138 peptidyl-prolyl cis-trans isomerase cyc...   199   1e-51
At3g63400.1 68416.m07137 peptidyl-prolyl cis-trans isomerase cyc...   199   1e-51
At2g15790.1 68415.m01810 peptidyl-prolyl cis-trans isomerase / c...   187   5e-48
At2g38730.1 68415.m04756 peptidyl-prolyl cis-trans isomerase, pu...   182   2e-46
At4g34960.1 68417.m04955 peptidyl-prolyl cis-trans isomerase, pu...   173   8e-44
At4g32420.1 68417.m04615 peptidyl-prolyl cis-trans isomerase cyc...   153   5e-38
At2g36130.1 68415.m04436 peptidyl-prolyl cis-trans isomerase, pu...   136   7e-33
At3g44600.1 68416.m04794 peptidyl-prolyl cis-trans isomerase cyc...   134   5e-32
At3g22920.1 68416.m02888 peptidyl-prolyl cis-trans isomerase, pu...   132   2e-31
At5g67530.1 68418.m08515 peptidyl-prolyl cis-trans isomerase cyc...   123   7e-29
At1g01940.1 68414.m00112 peptidyl-prolyl cis-trans isomerase cyc...   122   1e-28
At4g33060.1 68417.m04709 peptidyl-prolyl cis-trans isomerase cyc...   103   8e-23
At1g53720.1 68414.m06113 cyclophilin-RNA interacting protein, pu...    92   2e-19
At2g47320.1 68415.m05907 peptidyl-prolyl cis-trans isomerase cyc...    60   1e-09
At5g35100.1 68418.m04153 peptidyl-prolyl cis-trans isomerase cyc...    50   8e-07
At1g74070.1 68414.m08579 peptidyl-prolyl cis-trans isomerase cyc...    49   2e-06
At3g66654.3 68416.m00779 peptidyl-prolyl cis-trans isomerase cyc...    47   7e-06
At3g66654.2 68416.m00778 peptidyl-prolyl cis-trans isomerase cyc...    47   7e-06
At3g66654.1 68416.m00777 peptidyl-prolyl cis-trans isomerase cyc...    47   7e-06
At4g14805.1 68417.m02276 protease inhibitor/seed storage/lipid t...    31   0.37 
At3g09000.1 68416.m01053 proline-rich family protein                   30   0.86 
At4g27520.1 68417.m03952 plastocyanin-like domain-containing pro...    28   3.5  
At1g23090.1 68414.m02887 sulfate transporter, putative similar t...    28   3.5  
At5g07270.1 68418.m00829 ankyrin repeat family protein contains ...    28   4.6  
At3g20020.1 68416.m02533 protein arginine N-methyltransferase fa...    28   4.6  
At1g72540.1 68414.m08388 protein kinase, putative similar to aux...    28   4.6  
At3g23150.1 68416.m02918 ethylene receptor, putative (ETR2) simi...    27   6.1  
At3g05640.2 68416.m00628 protein phosphatase 2C, putative / PP2C...    27   6.1  
At3g05640.1 68416.m00627 protein phosphatase 2C, putative / PP2C...    27   6.1  
At1g78955.1 68414.m09205 beta-amyrin synthase, putative similar ...    27   6.1  
At1g03590.1 68414.m00339 protein phosphatase 2C family protein /...    27   6.1  
At5g61030.1 68418.m07659 RNA-binding protein, putative similar t...    27   8.0  
At5g15870.1 68418.m01857 glycosyl hydrolase family 81 protein si...    27   8.0  
At4g10840.2 68417.m01764 kinesin light chain-related low similar...    27   8.0  
At4g10840.1 68417.m01765 kinesin light chain-related low similar...    27   8.0  
At3g08840.2 68416.m01026 D-alanine--D-alanine ligase family simi...    27   8.0  
At3g04140.1 68416.m00438 ankyrin repeat family protein contains ...    27   8.0  
At2g33420.1 68415.m04096 expressed protein                             27   8.0  

>At2g21130.1 68415.m02507 peptidyl-prolyl cis-trans isomerase /
           cyclophilin (CYP2) / rotamase identical to cyclophilin
           [Arabidopsis thaliana] gi|2443757|gb|AAB71402; similar
           to peptidyl-prolyl cis-trans isomerase, PPIase
           (cyclophilin, cyclosporin A-binding protein)
           [Arabidopsis thaliana] SWISS-PROT:P34790
          Length = 174

 Score =  244 bits (597), Expect = 3e-65
 Identities = 116/157 (73%), Positives = 128/157 (81%), Gaps = 7/157 (4%)
 Frame = +1

Query: 91  SLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG-------YKGSIFH 249
           S P+VFFD+T+  AP GKIV+EL +D TPKT ENFRALCTGEKG G       +KGS FH
Sbjct: 3   SHPKVFFDMTIGGAPAGKIVMELYTDKTPKTAENFRALCTGEKGVGRSGKPLHFKGSSFH 62

Query: 250 RVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFI 429
           RVIPNFM QGGDFT  NGTGG+SIYG KFEDENF  KHTGPG+LSMANAGA+TNGSQFFI
Sbjct: 63  RVIPNFMCQGGDFTKGNGTGGESIYGAKFEDENFERKHTGPGILSMANAGANTNGSQFFI 122

Query: 430 TTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGSQSGK 540
            TVKT WLDG+HVVFG VVEG++VVK IE  GS SGK
Sbjct: 123 CTVKTDWLDGKHVVFGQVVEGLDVVKAIEKIGSSSGK 159


>At4g38740.1 68417.m05487 peptidyl-prolyl cis-trans isomerase /
           cyclophilin / rotamase / cyclosporin A-binding protein
           (ROC1) identical to SP|P34790 Peptidyl-prolyl cis-trans
           isomerase (EC 5.2.1.8) (PPIase) (Rotamase) (Cyclophilin)
           (Cyclosporin A-binding protein) {Arabidopsis thaliana}
          Length = 172

 Score =  243 bits (594), Expect = 7e-65
 Identities = 113/158 (71%), Positives = 130/158 (82%), Gaps = 7/158 (4%)
 Frame = +1

Query: 88  MSLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG-------YKGSIF 246
           M+ P+V+FD+T+D  P G+IV+EL +D TP+T ENFRALCTGEKG G       +KGS F
Sbjct: 1   MAFPKVYFDMTIDGQPAGRIVMELYTDKTPRTAENFRALCTGEKGVGGTGKPLHFKGSKF 60

Query: 247 HRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFF 426
           HRVIPNFM QGGDFT  NGTGG+SIYG+KFEDENF  KHTGPG+LSMANAGA+TNGSQFF
Sbjct: 61  HRVIPNFMCQGGDFTAGNGTGGESIYGSKFEDENFERKHTGPGILSMANAGANTNGSQFF 120

Query: 427 ITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGSQSGK 540
           I TVKT WLDG+HVVFG VVEG++VVK IE  GS SGK
Sbjct: 121 ICTVKTDWLDGKHVVFGQVVEGLDVVKAIEKVGSSSGK 158


>At2g16600.1 68415.m01906 peptidyl-prolyl cis-trans isomerase,
           cytosolic / cyclophilin / rotamase (ROC3) identical to
           cytosolic cyclophilin [Arabidopsis thaliana] GI:1305455
          Length = 173

 Score =  229 bits (559), Expect = 1e-60
 Identities = 107/155 (69%), Positives = 124/155 (80%), Gaps = 7/155 (4%)
 Frame = +1

Query: 97  PRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG-------YKGSIFHRV 255
           P+V+FD+TV     G+IV+EL +D TP+T ENFRALCTGE+G G       YKGS FHRV
Sbjct: 5   PKVYFDMTVGGKSAGRIVMELYADTTPETAENFRALCTGERGIGKQGKPLHYKGSSFHRV 64

Query: 256 IPNFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITT 435
           IP FM QGGDFT  NGTGG+SIYG+KF+DENF  KHTGPG+LSMANAGA+TNGSQFFI T
Sbjct: 65  IPKFMCQGGDFTAGNGTGGESIYGSKFKDENFIKKHTGPGILSMANAGANTNGSQFFICT 124

Query: 436 VKTSWLDGRHVVFGNVVEGMEVVKQIETFGSQSGK 540
            KTSWLDG+HVVFG VVEG+ VV+ IE  GS SG+
Sbjct: 125 EKTSWLDGKHVVFGQVVEGLNVVRDIEKVGSDSGR 159


>At4g34870.1 68417.m04946 peptidyl-prolyl cis-trans isomerase /
           cyclophilin (CYP1) / rotamase identical to cyclophilin
           (CYP1) gi|992643|gb|AAA75512; similar to peptidyl-prolyl
           cis-trans isomerase, PPIase (cyclophilin, cyclosporin
           A-binding protein) [Catharanthus roseus]
           SWISS-PROT:Q39613
          Length = 172

 Score =  228 bits (558), Expect = 2e-60
 Identities = 108/158 (68%), Positives = 125/158 (79%), Gaps = 7/158 (4%)
 Frame = +1

Query: 88  MSLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG-------YKGSIF 246
           MS PRVFFD+++   P+G+I +EL +D TP T ENFRALCTGEKG G       +KGSIF
Sbjct: 1   MSNPRVFFDMSLSGTPIGRIEMELFADTTPNTAENFRALCTGEKGMGKLGKPLHFKGSIF 60

Query: 247 HRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFF 426
           HRVIP FM QGGDFT  NGTGG+SIYG KF+DENF  KHTG G+LSMAN+G +TNGSQFF
Sbjct: 61  HRVIPGFMCQGGDFTAKNGTGGESIYGAKFKDENFIKKHTGAGILSMANSGPNTNGSQFF 120

Query: 427 ITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGSQSGK 540
           I T KTSWLDG+HVVFG VV+G++VVK IE  GS SGK
Sbjct: 121 ICTDKTSWLDGKHVVFGQVVKGLDVVKAIEKVGSDSGK 158


>At2g29960.1 68415.m03644 peptidyl-prolyl cis-trans isomerase /
           cyclophilin (CYP5) / rotamase identical to cyclophilin
           [Arabidopsis thaliana] gi|2443755|gb|AAB71401
          Length = 201

 Score =  224 bits (548), Expect = 3e-59
 Identities = 106/153 (69%), Positives = 120/153 (78%), Gaps = 7/153 (4%)
 Frame = +1

Query: 100 RVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG-------YKGSIFHRVI 258
           +V+FDV +D    G++VI L     PKT ENFRALCTGEKG G       YKGS FHR+I
Sbjct: 33  KVYFDVEIDGKSAGRVVIGLFGKAVPKTAENFRALCTGEKGVGKSGKPLHYKGSKFHRII 92

Query: 259 PNFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTV 438
           P+FM+QGGDFT+ NG GG+SIYG KF DENF LKHTGPGVLSMAN+G DTNGSQFFITTV
Sbjct: 93  PSFMIQGGDFTHGNGMGGESIYGQKFADENFKLKHTGPGVLSMANSGEDTNGSQFFITTV 152

Query: 439 KTSWLDGRHVVFGNVVEGMEVVKQIETFGSQSG 537
            TSWLDGRHVVFG VV+GM+VV +IE  G QSG
Sbjct: 153 TTSWLDGRHVVFGKVVQGMDVVYKIEAEGKQSG 185


>At3g56070.1 68416.m06231 peptidyl-prolyl cis-trans isomerase,
           putative / cyclophilin, putative / rotamase, putative
           similar to peptidyl-prolyl cis-trans isomerase, PPIase
           (cyclophilin, cyclosporin A-binding protein)
           [Catharanthus roseus] SWISS-PROT:Q39613
          Length = 176

 Score =  223 bits (546), Expect = 4e-59
 Identities = 103/157 (65%), Positives = 121/157 (77%), Gaps = 7/157 (4%)
 Frame = +1

Query: 88  MSLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG-------YKGSIF 246
           M+ P+VFFD+ +     G++V+EL +DVTP+T  NFRALCTGE G G       YKGS F
Sbjct: 1   MANPKVFFDILIGKMKAGRVVMELFADVTPRTANNFRALCTGENGIGKAGKALHYKGSAF 60

Query: 247 HRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFF 426
           HR+IP FM QGGDFT  NGTGG+SIYG+KFEDENF LKHTGPG+LSMAN+G +TNGSQFF
Sbjct: 61  HRIIPGFMCQGGDFTRGNGTGGESIYGSKFEDENFKLKHTGPGILSMANSGPNTNGSQFF 120

Query: 427 ITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGSQSG 537
           I T KTSWLDG+HVVFG VV+G  VVK +E  GS  G
Sbjct: 121 ICTEKTSWLDGKHVVFGKVVDGYNVVKAMEDVGSDMG 157


>At5g58710.1 68418.m07355 peptidyl-prolyl cis-trans isomerase,
           putative / cyclophilin, putative / rotamase, putative
           (ROC7) similar to cyclophilin [Arabidopsis thaliana]
           gi|2443755|gb|AAB71401
          Length = 204

 Score =  223 bits (544), Expect = 8e-59
 Identities = 106/153 (69%), Positives = 119/153 (77%), Gaps = 7/153 (4%)
 Frame = +1

Query: 100 RVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG-------YKGSIFHRVI 258
           +V+FDV +D    G+IV+ L     PKT ENFRALCTGEKG G       YKGS FHR+I
Sbjct: 36  KVYFDVEIDGKAAGRIVMGLFGKTVPKTVENFRALCTGEKGIGKNGKALHYKGSSFHRII 95

Query: 259 PNFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTV 438
           P+FMLQGGDFT+ NG GG+SIYG KF DENF LKHTGPG LSMANAG DTNGSQFFITTV
Sbjct: 96  PSFMLQGGDFTHGNGMGGESIYGEKFADENFKLKHTGPGFLSMANAGQDTNGSQFFITTV 155

Query: 439 KTSWLDGRHVVFGNVVEGMEVVKQIETFGSQSG 537
            TSWLDGRHVVFG VV GM+VV ++E  G+QSG
Sbjct: 156 TTSWLDGRHVVFGKVVTGMDVVYKVEAEGNQSG 188


>At3g62030.1 68416.m06967 peptidyl-prolyl cis-trans isomerase,
           chloroplast / cyclophilin / rotamase / cyclosporin
           A-binding protein (ROC4) identical to peptidyl-prolyl
           cis-trans isomerase, chloroplast precursor, PPIase
           (cyclophilin, cyclosporin A-binding protein)
           [Arabidopsis thaliana] SWISS-PROT:P34791; identical to
           cDNA nuclear-encoded chloroplast stromal cyclophilin
           (ROC4) GI:405130
          Length = 260

 Score =  219 bits (536), Expect = 7e-58
 Identities = 98/140 (70%), Positives = 117/140 (83%)
 Frame = +1

Query: 100 RVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQG 279
           +V+FDV +     G+IV+ L  +V PKT ENFRALCTGEK +GYKGS FHR+I +FM+QG
Sbjct: 96  KVYFDVEIGGEVAGRIVMGLFGEVVPKTVENFRALCTGEKKYGYKGSSFHRIIKDFMIQG 155

Query: 280 GDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDG 459
           GDFT  NGTGG SIYG KFEDENFTLKHTGPG+LSMANAG +TNGSQFFI TVKTSWLD 
Sbjct: 156 GDFTEGNGTGGISIYGAKFEDENFTLKHTGPGILSMANAGPNTNGSQFFICTVKTSWLDN 215

Query: 460 RHVVFGNVVEGMEVVKQIET 519
           +HVVFG V+EGM++V+ +E+
Sbjct: 216 KHVVFGQVIEGMKLVRTLES 235


>At5g13120.1 68418.m01503 peptidyl-prolyl cis-trans isomerase
           cyclophilin-type family protein contains Pfam domain,
           PF00160: peptidyl-prolyl cis-trans isomerase,
           cyclophilin-type
          Length = 259

 Score =  218 bits (532), Expect = 2e-57
 Identities = 103/143 (72%), Positives = 117/143 (81%), Gaps = 4/143 (2%)
 Frame = +1

Query: 100 RVFFDVTVDDAPLGK----IVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNF 267
           +V+FD++V + P+GK    IVI L  D  P+T ENFRALCTGEKGFGYKGS FHRVI +F
Sbjct: 91  KVYFDISVGN-PVGKLAGRIVIGLYGDDVPQTVENFRALCTGEKGFGYKGSTFHRVIRDF 149

Query: 268 MLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTS 447
           M+QGGDF   NGTGGKS+YG  F+DENF L H GPGVLSMANAG +TNGSQFFI T+KTS
Sbjct: 150 MIQGGDFEKGNGTGGKSVYGRTFKDENFKLSHVGPGVLSMANAGPNTNGSQFFICTIKTS 209

Query: 448 WLDGRHVVFGNVVEGMEVVKQIE 516
           WLDGRHVVFG V+EGMEVVK IE
Sbjct: 210 WLDGRHVVFGQVIEGMEVVKLIE 232


>At3g55920.1 68416.m06214 peptidyl-prolyl cis-trans isomerase,
           putative / cyclophilin, putative / rotamase, putative
           similar to cyclophilin [Arabidopsis thaliana]
           gi|2443755|gb|AAB71401
          Length = 228

 Score =  215 bits (526), Expect = 1e-56
 Identities = 98/153 (64%), Positives = 120/153 (78%), Gaps = 7/153 (4%)
 Frame = +1

Query: 100 RVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG-------YKGSIFHRVI 258
           +V+FD+ ++ +P G+I+I L  ++ PKT ENFR+LCTGEKG G       +KGS FHR+I
Sbjct: 60  KVYFDIQINGSPAGRILIGLFGNIVPKTAENFRSLCTGEKGVGNMGKPLYFKGSSFHRII 119

Query: 259 PNFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTV 438
           P FM+QGGDFT  +G GG+SIYG+KF DENF LKHTGPG LSMAN+G D+NGSQFFITTV
Sbjct: 120 PGFMIQGGDFTRGDGRGGESIYGDKFADENFKLKHTGPGFLSMANSGPDSNGSQFFITTV 179

Query: 439 KTSWLDGRHVVFGNVVEGMEVVKQIETFGSQSG 537
            TSWLDG HVVFG V+ GMEVV++IE  G  SG
Sbjct: 180 TTSWLDGHHVVFGKVLSGMEVVRKIEAQGQDSG 212


>At3g63400.2 68416.m07138 peptidyl-prolyl cis-trans isomerase
           cyclophilin-type family protein similar to cyclophylin
           [Digitalis lanata] GI:1563719; contains Pfam profile
           PF00160: peptidyl-prolyl cis-trans isomerase,
           cyclophilin-type; contains AT-donor splice site at
           intron 9
          Length = 387

 Score =  199 bits (485), Expect = 1e-51
 Identities = 98/160 (61%), Positives = 113/160 (70%), Gaps = 8/160 (5%)
 Frame = +1

Query: 85  KMSLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG--------YKGS 240
           K   P VF DV++   P+ +IVIEL +DV PKT ENFRALCTGE G G        +KGS
Sbjct: 3   KKKNPNVFLDVSIGGDPVQRIVIELFADVVPKTAENFRALCTGEAGVGKSTGKPLHFKGS 62

Query: 241 IFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQ 420
            FHRVI  FM QGGDF+N NGTGG+SIYG KF DENF L H G GVLSMAN G +TNGSQ
Sbjct: 63  SFHRVIKGFMAQGGDFSNGNGTGGESIYGGKFSDENFRLDHDGAGVLSMANCGPNTNGSQ 122

Query: 421 FFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGSQSGK 540
           FFI   +   LDG+HVVFG VVEGM V+K++E  G+  GK
Sbjct: 123 FFILFKRQPHLDGKHVVFGKVVEGMAVIKKMELVGTSDGK 162


>At3g63400.1 68416.m07137 peptidyl-prolyl cis-trans isomerase
           cyclophilin-type family protein similar to cyclophylin
           [Digitalis lanata] GI:1563719; contains Pfam profile
           PF00160: peptidyl-prolyl cis-trans isomerase,
           cyclophilin-type; contains AT-donor splice site at
           intron 9
          Length = 570

 Score =  199 bits (485), Expect = 1e-51
 Identities = 98/160 (61%), Positives = 113/160 (70%), Gaps = 8/160 (5%)
 Frame = +1

Query: 85  KMSLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG--------YKGS 240
           K   P VF DV++   P+ +IVIEL +DV PKT ENFRALCTGE G G        +KGS
Sbjct: 3   KKKNPNVFLDVSIGGDPVQRIVIELFADVVPKTAENFRALCTGEAGVGKSTGKPLHFKGS 62

Query: 241 IFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQ 420
            FHRVI  FM QGGDF+N NGTGG+SIYG KF DENF L H G GVLSMAN G +TNGSQ
Sbjct: 63  SFHRVIKGFMAQGGDFSNGNGTGGESIYGGKFSDENFRLDHDGAGVLSMANCGPNTNGSQ 122

Query: 421 FFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGSQSGK 540
           FFI   +   LDG+HVVFG VVEGM V+K++E  G+  GK
Sbjct: 123 FFILFKRQPHLDGKHVVFGKVVEGMAVIKKMELVGTSDGK 162


>At2g15790.1 68415.m01810 peptidyl-prolyl cis-trans isomerase /
           cyclophilin-40 (CYP40) / rotamase identical to
           cyclophilin-40 [Arabidopsis thaliana] GI:13442983;
           supporting cDNA gi|13442982|gb|AY026065.1|
          Length = 361

 Score =  187 bits (455), Expect = 5e-48
 Identities = 91/151 (60%), Positives = 110/151 (72%), Gaps = 8/151 (5%)
 Frame = +1

Query: 88  MSLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG--------YKGSI 243
           M   + F D+++     G+IVIEL  DV PKT ENFR LCTGEKG G        YKG+ 
Sbjct: 1   MGRSKCFMDISIGGELEGRIVIELYDDVVPKTAENFRLLCTGEKGLGPNTGVPLHYKGNR 60

Query: 244 FHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQF 423
           FHRVI  FM+QGGD + ++GTGG+SIYG KF+DENF LKH   G+LSMAN+G +TNGSQF
Sbjct: 61  FHRVIKGFMIQGGDISANDGTGGESIYGLKFDDENFELKHERKGMLSMANSGPNTNGSQF 120

Query: 424 FITTVKTSWLDGRHVVFGNVVEGMEVVKQIE 516
           FITT +TS LDG+HVVFG V +GM VV+ IE
Sbjct: 121 FITTTRTSHLDGKHVVFGRVTKGMGVVRSIE 151


>At2g38730.1 68415.m04756 peptidyl-prolyl cis-trans isomerase,
           putative / cyclophilin, putative / rotamase, putative
           similar to cyclophilin [Homo sapiens]
           gi|3647230|gb|AAC60793
          Length = 199

 Score =  182 bits (442), Expect = 2e-46
 Identities = 86/146 (58%), Positives = 108/146 (73%), Gaps = 6/146 (4%)
 Frame = +1

Query: 97  PRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGE-----KGFGYKGSIFHRVIP 261
           P VFFDV++   P G+I +EL +D+ PKT ENFR  CTGE     K  GYK   FHRVI 
Sbjct: 32  PVVFFDVSIGGIPAGRIKMELFADIAPKTAENFRQFCTGELRKAGKPLGYKECQFHRVIK 91

Query: 262 NFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVK 441
           +FM+Q GDF  ++G+G  SIYG+KFEDENFT KHTGPG+LSMAN+G +TNG QFFIT  K
Sbjct: 92  DFMVQSGDFLKNDGSGCMSIYGHKFEDENFTAKHTGPGLLSMANSGPNTNGCQFFITCAK 151

Query: 442 TSWLDGRHVVFGNVV-EGMEVVKQIE 516
             WLD +HVVFG V+ +G+ V+++IE
Sbjct: 152 CDWLDNKHVVFGRVLGDGLLVMRKIE 177


>At4g34960.1 68417.m04955 peptidyl-prolyl cis-trans isomerase,
           putative / cyclophilin, putative / rotamase, putative
           similar to cyclophilin [Arabidopsis thaliana]
           gi|2443755|gb|AAB71401
          Length = 224

 Score =  173 bits (420), Expect = 8e-44
 Identities = 86/155 (55%), Positives = 106/155 (68%), Gaps = 8/155 (5%)
 Frame = +1

Query: 100 RVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKG-------FGYKGSIFHRVI 258
           RVF DV +D   LG+IVI L   V PKT ENFRALCTGEKG         YKG+ FHR+I
Sbjct: 48  RVFLDVDIDGQRLGRIVIGLYGTVVPKTVENFRALCTGEKGKTSSGKPLHYKGTPFHRII 107

Query: 259 PNFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTV 438
             F++QGGD  + +G    SIYG  F DENF ++H+  G+++MAN G D+NGSQFFITTV
Sbjct: 108 SGFVIQGGDIIHGDGKSSDSIYGGTFPDENFKIQHSHAGMVAMANTGPDSNGSQFFITTV 167

Query: 439 KTSWLDGRHVVFGNVVEGMEVVKQIE-TFGSQSGK 540
           K SWL+G HVV G V++GM+ V  IE   G+ SGK
Sbjct: 168 KASWLEGEHVVLGKVIQGMDNVFAIEGGAGTYSGK 202


>At4g32420.1 68417.m04615 peptidyl-prolyl cis-trans isomerase
           cyclophilin-type family protein weak similarity to
           CARS-Cyp [Homo sapiens]  GI:1117968; contains Pfam
           profile PF00160: peptidyl-prolyl cis-trans isomerase,
           cyclophilin-type
          Length = 837

 Score =  153 bits (372), Expect = 5e-38
 Identities = 78/160 (48%), Positives = 98/160 (61%), Gaps = 8/160 (5%)
 Frame = +1

Query: 85  KMSLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG--------YKGS 240
           K   P+VF DV++D  P   +V EL  +V PKT ENFRALCTGEKG G        YKGS
Sbjct: 3   KKKNPQVFMDVSIDGDPAETMVFELFPEVAPKTSENFRALCTGEKGIGPRSGKPLHYKGS 62

Query: 241 IFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQ 420
            FHR++     Q GDF N NGT G+SIY  KF DE+  L+H   G+LSM+ A  D  GS 
Sbjct: 63  FFHRIMKGSSAQAGDFVNRNGTAGESIYAGKFPDESPKLRHEETGLLSMSIADRDKFGSH 122

Query: 421 FFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGSQSGK 540
           F IT      LD  +VVFG +++G E++K+IE  G + GK
Sbjct: 123 FHITFRPNQQLDRNNVVFGKLIQGKEILKKIERVGDEEGK 162


>At2g36130.1 68415.m04436 peptidyl-prolyl cis-trans isomerase,
           putative / cyclophilin, putative / rotamase, putative
           contains Pfam domain, PF00160: peptidyl-prolyl cis-trans
           isomerase, cyclophilin-type
          Length = 164

 Score =  136 bits (330), Expect = 7e-33
 Identities = 68/135 (50%), Positives = 94/135 (69%), Gaps = 1/135 (0%)
 Frame = +1

Query: 112 DVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFT 291
           +VT++ + +G   +E+    +P+TC NF  L    +G+ Y   +FHR++ +F++QGGD T
Sbjct: 11  EVTLETS-MGPFTVEMYYKHSPRTCRNFLEL--SRRGY-YDNVLFHRIVKDFIVQGGDPT 66

Query: 292 NHNGTGGKSIYGNKFEDE-NFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHV 468
              G GG+SIYG+KFEDE N  LKHTG G+LSMANAG +TNGSQFFIT      LDG+H 
Sbjct: 67  G-TGRGGESIYGSKFEDEINKELKHTGAGILSMANAGPNTNGSQFFITLAPQPSLDGKHT 125

Query: 469 VFGNVVEGMEVVKQI 513
           +FG V  GMEV+K++
Sbjct: 126 IFGRVCRGMEVIKRL 140


>At3g44600.1 68416.m04794 peptidyl-prolyl cis-trans isomerase
           cyclophilin-type family protein similar to SP|P87051
           Peptidyl-prolyl cis-trans isomerase cyp2 (EC 5.2.1.8)
           (Cyclophilin cyp2) {Schizosaccharomyces pombe}; contains
           Pfam profiles PF00160: peptidyl-prolyl cis-trans
           isomerase cyclophilin-type, PF00400: WD domain G-beta
           repeat
          Length = 631

 Score =  134 bits (323), Expect = 5e-32
 Identities = 71/128 (55%), Positives = 89/128 (69%), Gaps = 1/128 (0%)
 Frame = +1

Query: 136 LGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGK 315
           LG I ++L  +  PKT ENF   C    G+ Y   +FHRVI  FM+Q GD    +GTGG+
Sbjct: 484 LGDIHMKLYPEECPKTVENFTTHC--RNGY-YDNHLFHRVIRGFMIQTGDPLG-DGTGGQ 539

Query: 316 SIYGNKFEDE-NFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEG 492
           SI+G +FEDE + +L+H  P  LSMANAG +TNGSQFFITTV T WLD +H VFG VV+G
Sbjct: 540 SIWGREFEDEFHKSLRHDRPFTLSMANAGPNTNGSQFFITTVATPWLDNKHTVFGRVVKG 599

Query: 493 MEVVKQIE 516
           M+VV+ IE
Sbjct: 600 MDVVQGIE 607


>At3g22920.1 68416.m02888 peptidyl-prolyl cis-trans isomerase,
           putative / cyclophilin, putative / rotamase, putative
           similar to peptidyl-prolyl cis-trans isomerase PPIase
           (cyclophilin, cyclosporin A-binding protein) [Tomato]
           SWISS-PROT:P21568
          Length = 232

 Score =  132 bits (318), Expect = 2e-31
 Identities = 73/152 (48%), Positives = 97/152 (63%), Gaps = 9/152 (5%)
 Frame = +1

Query: 88  MSLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG-------YKGSIF 246
           M+ P+VFFD+TVD  P G+IVIEL +D+TP+T ENFR LCTGE+G G       YKGS F
Sbjct: 1   MANPKVFFDLTVDGKPAGRIVIELFADLTPRTAENFRGLCTGERGIGKCGKPIHYKGSTF 60

Query: 247 HRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKH-TGPGVLSMANAGADTNGSQF 423
             ++P+ M  GGD    N    + I+  + +DE F L H  GPG++SM    AD+NGSQF
Sbjct: 61  DHIVPDLMWCGGDIIFEN----EPIHSEELDDEYFILNHEDGPGIISM----ADSNGSQF 112

Query: 424 FITTVKTS-WLDGRHVVFGNVVEGMEVVKQIE 516
            I        +DG HVV G VVEG+++++ IE
Sbjct: 113 QIHMKDYGLQVDGDHVVIGKVVEGLDLMRNIE 144


>At5g67530.1 68418.m08515 peptidyl-prolyl cis-trans isomerase
           cyclophilin-type family protein contains Pfam domain,
           PF00160: peptidyl-prolyl cis-trans isomerase,
           cyclophilin-type
          Length = 595

 Score =  123 bits (297), Expect = 7e-29
 Identities = 64/127 (50%), Positives = 83/127 (65%), Gaps = 1/127 (0%)
 Frame = +1

Query: 139 GKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGKS 318
           G + IEL  D+ P+ CENF  LC  E+G+ Y G  FHR I NFM+QGGD T   G GG+S
Sbjct: 353 GDLNIELHCDIAPRACENFITLC--ERGY-YNGVAFHRSIRNFMIQGGDPTG-TGKGGES 408

Query: 319 IYGNKFEDE-NFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGM 495
           I+G  F+DE N  L H+G GV+SMAN+G  TNGSQFF+     + L+ +H VFG VV G+
Sbjct: 409 IWGKPFKDEPNSKLLHSGRGVVSMANSGPHTNGSQFFVLYKSATHLNYKHTVFGGVVGGL 468

Query: 496 EVVKQIE 516
             +  +E
Sbjct: 469 ATLAAME 475


>At1g01940.1 68414.m00112 peptidyl-prolyl cis-trans isomerase
           cyclophilin-type family protein contains Pfam domain,
           PF00160: peptidyl-prolyl cis-trans isomerase,
           cyclophilin-type
          Length = 160

 Score =  122 bits (295), Expect = 1e-28
 Identities = 66/128 (51%), Positives = 82/128 (64%), Gaps = 1/128 (0%)
 Frame = +1

Query: 136 LGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGK 315
           LG I  E+  D  PK+ ENF ALC    G+ Y G+IFHR I  FM+QGGD     G GG 
Sbjct: 9   LGDIKCEIFCDEVPKSAENFLALCAS--GY-YDGTIFHRNIKGFMIQGGD-PKGTGKGGT 64

Query: 316 SIYGNKFEDE-NFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEG 492
           SI+G KF DE   +LKH   G+LSMAN+G +TNGSQFFIT  K   L+G + +FG V+ G
Sbjct: 65  SIWGKKFNDEIRDSLKHNARGMLSMANSGPNTNGSQFFITYAKQPHLNGLYTIFGKVIHG 124

Query: 493 MEVVKQIE 516
            EV+  +E
Sbjct: 125 FEVLDIME 132


>At4g33060.1 68417.m04709 peptidyl-prolyl cis-trans isomerase
           cyclophilin-type family protein contains Pfam domain,
           PF00160: peptidyl-prolyl cis-trans isomerase,
           cyclophilin-type
          Length = 504

 Score =  103 bits (247), Expect = 8e-23
 Identities = 56/117 (47%), Positives = 76/117 (64%), Gaps = 2/117 (1%)
 Frame = +1

Query: 139 GKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGKS 318
           G I +EL     PK+  NF  LC   +G+ +  +IFHRVIP F++QGGD T  +GTGG S
Sbjct: 22  GPIDVELWPKEAPKSVRNFVQLCL--EGY-FDNTIFHRVIPGFLVQGGDPTG-SGTGGDS 77

Query: 319 IYGNKFEDE-NFTLKHTGPGVLSMANAGA-DTNGSQFFITTVKTSWLDGRHVVFGNV 483
           IYG  F DE +  L+ +  G+++MANA + ++NGSQFF T  K  WLD +H +FG V
Sbjct: 78  IYGGVFADEFHSRLRFSHRGIVAMANASSPNSNGSQFFFTLDKCDWLDKKHTIFGKV 134


>At1g53720.1 68414.m06113 cyclophilin-RNA interacting protein,
           putative
          Length = 506

 Score = 92.3 bits (219), Expect = 2e-19
 Identities = 57/135 (42%), Positives = 77/135 (57%), Gaps = 9/135 (6%)
 Frame = +1

Query: 136 LGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGK 315
           LG IVI+L SD  P TC+NF  LC   K   Y G +FH V  +F  Q GD T   G GG 
Sbjct: 9   LGDIVIDLHSDKCPLTCKNFLKLC---KIKYYNGCLFHTVQKDFTAQTGDPTG-TGAGGD 64

Query: 316 SI----YGNK---FEDE-NFTLKHTGPGVLSMANAGADTNGSQFFIT-TVKTSWLDGRHV 468
           SI    YG +   ++DE +  LKH+  G ++MA+ G + N SQF+ T      +LDG+H 
Sbjct: 65  SIYKFLYGEQARFYKDEIHLDLKHSKTGTVAMASGGENLNASQFYFTLRDDLDYLDGKHT 124

Query: 469 VFGNVVEGMEVVKQI 513
           VFG + EG + + +I
Sbjct: 125 VFGQIAEGFDTLTRI 139


>At2g47320.1 68415.m05907 peptidyl-prolyl cis-trans isomerase
           cyclophilin-type family protein contains Pfam domain,
           PF00160: peptidyl-prolyl cis-trans isomerase,
           cyclophilin-type
          Length = 230

 Score = 59.7 bits (138), Expect = 1e-09
 Identities = 37/130 (28%), Positives = 64/130 (49%)
 Frame = +1

Query: 127 DAPLGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNHNGT 306
           D   G + IEL  D  P   + F   C  + G+ +KG +F RV+ +F++Q GD    +  
Sbjct: 83  DTGKGSVTIELFKDTAPNVVDQFMKFC--QDGY-FKGFLFSRVVKHFVIQAGDSAEFDAV 139

Query: 307 GGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVV 486
              ++     +    +LKH    ++    A  +  G +FFI + +   L+ +  VFG V 
Sbjct: 140 KDWALDRKNIDT---SLKHE-EFMVGTPKAKNEQGGFEFFIVSAQIKDLNEKLTVFGRVS 195

Query: 487 EGMEVVKQIE 516
           +G +VV++IE
Sbjct: 196 KGQDVVQEIE 205


>At5g35100.1 68418.m04153 peptidyl-prolyl cis-trans isomerase
           cyclophilin-type family protein contains Pfam domain,
           PF00160: peptidyl-prolyl cis-trans isomerase,
           cyclophilin-type
          Length = 290

 Score = 50.4 bits (115), Expect = 8e-07
 Identities = 45/152 (29%), Positives = 69/152 (45%), Gaps = 20/152 (13%)
 Frame = +1

Query: 124 DDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPN--FML--QGGDF- 288
           D  PLG++V+ L     P T   F+ +CT      YK +  H++ P   F+   QGG   
Sbjct: 81  DSTPLGRVVLGLYGRHVPITVSTFKRMCTSSST-SYKNTPVHKIFPGQYFLAGRQGGGRR 139

Query: 289 -TNHNGTGGKSIYGNK--FEDENFTLKHTGPGVLSMANAGADTNGS----------QFFI 429
            T   G   + +  N      + F L H   GV+S+  +  D +            +F I
Sbjct: 140 DTAEVGYSLRDLPRNTDVVNSKAFLLPHARAGVVSLCLSENDDDDDIRLDPDYRNVEFLI 199

Query: 430 TTVK--TSWLDGRHVVFGNVVEGMEVVKQIET 519
           TT    +  LDG ++VFG V+EG++VV  I +
Sbjct: 200 TTGPGPSPQLDGGNIVFGTVLEGLDVVTSISS 231


>At1g74070.1 68414.m08579 peptidyl-prolyl cis-trans isomerase
           cyclophilin-type family protein contains Pfam domain,
           PF00160: peptidyl-prolyl cis-trans isomerase,
           cyclophilin-type
          Length = 317

 Score = 48.8 bits (111), Expect = 2e-06
 Identities = 19/61 (31%), Positives = 35/61 (57%)
 Frame = +1

Query: 100 RVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQG 279
           + F DV++D  P+G+I+I L  D  P     F ++ +G+ G  Y+   F +++P ++  G
Sbjct: 93  KAFIDVSIDGEPIGRIIIGLYGDDVPAGTARFSSIVSGKAGITYRRKDFVKIMPGYVQHG 152

Query: 280 G 282
           G
Sbjct: 153 G 153



 Score = 32.7 bits (71), Expect = 0.16
 Identities = 15/35 (42%), Positives = 24/35 (68%)
 Frame = +1

Query: 409 NGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQI 513
           NG++F IT V +  L+   +V G V+EGM VV+++
Sbjct: 230 NGTEFVITAVDSPELEDSVLVIGKVLEGMGVVEKM 264


>At3g66654.3 68416.m00779 peptidyl-prolyl cis-trans isomerase
           cyclophilin-type family protein contains Pfam domain,
           PF00160: peptidyl-prolyl cis-trans isomerase,
           cyclophilin-type
          Length = 236

 Score = 47.2 bits (107), Expect = 7e-06
 Identities = 35/126 (27%), Positives = 60/126 (47%)
 Frame = +1

Query: 139 GKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGKS 318
           G I +EL  + +P+  + F  LC  +    +KG  F RVI N+++Q G   +       +
Sbjct: 90  GLITVELFKEGSPEVVDKFLDLCQKDH---FKGMPFQRVIKNYLVQAGHSPSSIPVEEWT 146

Query: 319 IYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGME 498
             G      +   KH    + +  N G +    +  ITT     L+ + +VFG V++G +
Sbjct: 147 AKGKLRGRLHIGPKHEAFMLGTPKNKG-NNKDFELLITTAPIPDLNDQLIVFGRVLKGED 205

Query: 499 VVKQIE 516
           VV++IE
Sbjct: 206 VVQEIE 211


>At3g66654.2 68416.m00778 peptidyl-prolyl cis-trans isomerase
           cyclophilin-type family protein contains Pfam domain,
           PF00160: peptidyl-prolyl cis-trans isomerase,
           cyclophilin-type
          Length = 236

 Score = 47.2 bits (107), Expect = 7e-06
 Identities = 35/126 (27%), Positives = 60/126 (47%)
 Frame = +1

Query: 139 GKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGKS 318
           G I +EL  + +P+  + F  LC  +    +KG  F RVI N+++Q G   +       +
Sbjct: 90  GLITVELFKEGSPEVVDKFLDLCQKDH---FKGMPFQRVIKNYLVQAGHSPSSIPVEEWT 146

Query: 319 IYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGME 498
             G      +   KH    + +  N G +    +  ITT     L+ + +VFG V++G +
Sbjct: 147 AKGKLRGRLHIGPKHEAFMLGTPKNKG-NNKDFELLITTAPIPDLNDQLIVFGRVLKGED 205

Query: 499 VVKQIE 516
           VV++IE
Sbjct: 206 VVQEIE 211


>At3g66654.1 68416.m00777 peptidyl-prolyl cis-trans isomerase
           cyclophilin-type family protein contains Pfam domain,
           PF00160: peptidyl-prolyl cis-trans isomerase,
           cyclophilin-type
          Length = 236

 Score = 47.2 bits (107), Expect = 7e-06
 Identities = 35/126 (27%), Positives = 60/126 (47%)
 Frame = +1

Query: 139 GKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGKS 318
           G I +EL  + +P+  + F  LC  +    +KG  F RVI N+++Q G   +       +
Sbjct: 90  GLITVELFKEGSPEVVDKFLDLCQKDH---FKGMPFQRVIKNYLVQAGHSPSSIPVEEWT 146

Query: 319 IYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGME 498
             G      +   KH    + +  N G +    +  ITT     L+ + +VFG V++G +
Sbjct: 147 AKGKLRGRLHIGPKHEAFMLGTPKNKG-NNKDFELLITTAPIPDLNDQLIVFGRVLKGED 205

Query: 499 VVKQIE 516
           VV++IE
Sbjct: 206 VVQEIE 211


>At4g14805.1 68417.m02276 protease inhibitor/seed storage/lipid
           transfer protein (LTP)-related weak hit to Pfam PF00234:
           Protease inhibitor/seed storage/LTP family
          Length = 219

 Score = 31.5 bits (68), Expect = 0.37
 Identities = 21/60 (35%), Positives = 32/60 (53%)
 Frame = -2

Query: 515 SICLTTSMPSTTFPKTTCLPSSQEVLTVVMKNWEPLVSAPALAMERTPGPVCLRVKFSSS 336
           ++  T   PS++ P  TC   ++E+  V+     P VS+P   M  TP P+C  V F+SS
Sbjct: 22  AVTATQQAPSSSPPVLTC---TEEL--VMFSPCLPYVSSPPNNMSETPDPICCSV-FTSS 75


>At3g09000.1 68416.m01053 proline-rich family protein
          Length = 541

 Score = 30.3 bits (65), Expect = 0.86
 Identities = 28/81 (34%), Positives = 37/81 (45%), Gaps = 5/81 (6%)
 Frame = +2

Query: 170 SLPRRVKTSVPCALARKASVTRAPF-----SIVSSPISCCKEGTSPTITALGESPSTAIS 334
           S PR    S    ++R A+ TR P      SIVSS         SPT+ +L ++PS    
Sbjct: 225 SNPRPSSASSKKPVSRPATPTRRPSTPTGPSIVSSKAPSRGTSPSPTVNSLSKAPSRG-- 282

Query: 335 LKTRISPLSTLDLASSPWLMP 397
                SP  TL+ +S PW  P
Sbjct: 283 ----TSPSPTLN-SSRPWKPP 298


>At4g27520.1 68417.m03952 plastocyanin-like domain-containing
           protein similar to PIR|JC7196 phytocyanin-related
           protein Pn14 {Ipomoea nil}; contains Pfam profile
           PF02298: Plastocyanin-like domain
          Length = 349

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 21/57 (36%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
 Frame = +2

Query: 191 TSVPCALARKASVTRAPFS--IVSSPISCCKEGTSPTITALGESPSTAISLKTRISP 355
           TS P  +A K+S T  P S  + S P S   + +SP   +   SPS A    T  SP
Sbjct: 235 TSPPAPMAPKSSSTIPPSSAPMTSPPGSMAPKSSSPVSNSPTVSPSLAPGGSTSSSP 291


>At1g23090.1 68414.m02887 sulfate transporter, putative similar to
           sulfate transporter [Arabidopsis thaliana] GI:2285885;
           contains Pfam profiles PF00916: Sulfate transporter
           family, PF01740: STAS domain
          Length = 631

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 4/87 (4%)
 Frame = +1

Query: 283 DFTNHNG-TGGKSIYGNKFEDENFTLKHTGPGVLSM---ANAGADTNGSQFFITTVKTSW 450
           +F N N  T   S +  + E+E    KH+    L +   A +G DTNG  FF    KT+ 
Sbjct: 517 NFANSNYLTERTSRWIEECEEEEAQEKHSSLQFLILEMSAVSGVDTNGVSFFKELKKTTA 576

Query: 451 LDGRHVVFGNVVEGMEVVKQIETFGSQ 531
                +VF N +   EVV++++    Q
Sbjct: 577 KKDIELVFVNPLS--EVVEKLQRADEQ 601


>At5g07270.1 68418.m00829 ankyrin repeat family protein contains
           ankyrin repeats, Pfam:PF00023
          Length = 513

 Score = 27.9 bits (59), Expect = 4.6
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = +2

Query: 227 VTRAPFSIVSSPISCCKEGTSPTITALG 310
           VT +PF  V+ P+  C EGT P     G
Sbjct: 429 VTCSPFPSVNIPMCTCNEGTCPNFETHG 456


>At3g20020.1 68416.m02533 protein arginine N-methyltransferase
           family protein similar to SP|Q96LA8 Protein arginine
           N-methyltransferase 6 (EC 2.1.1.-) {Homo sapiens}
          Length = 435

 Score = 27.9 bits (59), Expect = 4.6
 Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
 Frame = +2

Query: 254 SSPISCCKEGTSPTITALGES---PSTAISLKTRISPLSTLDLASSP 385
           S P S   + TS T  A G S   PS  ++ K R +P   L L++SP
Sbjct: 327 SGPASSPAKNTSETSIASGSSSISPSGEVNQKKRTNPSDALVLSTSP 373


>At1g72540.1 68414.m08388 protein kinase, putative similar to
           auxin-regulated dual specificity cytosolic kinase
           [Lycopersicon esculentum] gi|14484938|gb|AAK62821;
           similar to serine/threonine protein kinase
           gi|1066501|gb|AAA81538
          Length = 450

 Score = 27.9 bits (59), Expect = 4.6
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = +2

Query: 71  LLIPAKCLYHEYSSTSLLTMPHWEKLLLS*EVTSLPRRVKTS 196
           + +P  C+ +     +  T P  EKLLL    TS+P RV  S
Sbjct: 8   ICLPISCINNTNQKKTTTTNPPKEKLLLLSRQTSVPSRVYMS 49


>At3g23150.1 68416.m02918 ethylene receptor, putative (ETR2) similar
           to putative ethylene receptor; ETR2 [Arabidopsis
           thaliana] gi|3687654|gb|AAC62208.
          Length = 773

 Score = 27.5 bits (58), Expect = 6.1
 Identities = 13/43 (30%), Positives = 21/43 (48%)
 Frame = -1

Query: 483 NIPKDNMSAIQPGGLDSGDEELGTISISTGISHGEDARSSVLK 355
           N+  D+ S+     + S D+E+G +  S G   G+D    V K
Sbjct: 543 NVENDDSSSQSFASVSSRDQEVGDVRFSGGYGLGQDLSFGVCK 585


>At3g05640.2 68416.m00628 protein phosphatase 2C, putative / PP2C,
           putative similar to protein phosphatase-2C GB:AAC36699
           from [Mesembryanthemum crystallinum]
          Length = 358

 Score = 27.5 bits (58), Expect = 6.1
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = -2

Query: 431 VMKNWEPLVSAPALAMERTPGPVCLR 354
           V + W+P+  +P LAM R  G  C++
Sbjct: 242 VHRVWQPVDESPGLAMSRAFGDYCIK 267


>At3g05640.1 68416.m00627 protein phosphatase 2C, putative / PP2C,
           putative similar to protein phosphatase-2C GB:AAC36699
           from [Mesembryanthemum crystallinum]
          Length = 358

 Score = 27.5 bits (58), Expect = 6.1
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = -2

Query: 431 VMKNWEPLVSAPALAMERTPGPVCLR 354
           V + W+P+  +P LAM R  G  C++
Sbjct: 242 VHRVWQPVDESPGLAMSRAFGDYCIK 267


>At1g78955.1 68414.m09205 beta-amyrin synthase, putative similar to
           beta-Amyrin Synthase GI:3688600 from [Panax ginseng] and
           GI:8918271 from [Pisum sativum]
          Length = 769

 Score = 27.5 bits (58), Expect = 6.1
 Identities = 17/56 (30%), Positives = 24/56 (42%)
 Frame = -2

Query: 476 PKTTCLPSSQEVLTVVMKNWEPLVSAPALAMERTPGPVCLRVKFSSSNLLP*MDFP 309
           PK   +PS  E   +V  +W  +    A   ER P P+    K   ++ L   DFP
Sbjct: 666 PKKRYIPSEGERSNLVQTSWAMMGLLHAGQAERDPSPLHRAAKLLINSQLENGDFP 721


>At1g03590.1 68414.m00339 protein phosphatase 2C family protein /
           PP2C family protein similar to protein phosphatase-2C;
           PP2C (GI:3643088) [Mesembryanthemum crystallinum];
           contains Pfam PF00481 : Protein phosphatase 2C domain;
          Length = 447

 Score = 27.5 bits (58), Expect = 6.1
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = -2

Query: 431 VMKNWEPLVSAPALAMERTPGPVCLR 354
           V + W P  +AP LAM R  G  CL+
Sbjct: 240 VSRVWLPFDNAPGLAMARAFGDFCLK 265


>At5g61030.1 68418.m07659 RNA-binding protein, putative similar to
           RNA-binding protein from [Solanum tuberosum]
           GI:15822705, [Nicotiana tabacum] GI:15822703, [Nicotiana
           sylvestris] GI:624925; contains InterPro entry
           IPR000504: RNA-binding region RNP-1 (RNA recognition
           motif) (RRM)
          Length = 309

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 18/47 (38%), Positives = 19/47 (40%)
 Frame = +1

Query: 277 GGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGS 417
           GGD T H G GG       F     T    G G  + A A  D NGS
Sbjct: 188 GGDATGHGGAGGGYGSSGGFGSSGNTY---GEGSSASAGAVGDYNGS 231


>At5g15870.1 68418.m01857 glycosyl hydrolase family 81 protein
           similar to beta-glucan-elicitor receptor GI:1752734 from
           [Glycine max]
          Length = 745

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 20/48 (41%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
 Frame = -2

Query: 311 PPVPLWLVKSPPCSMKLGMTRWKMEP-L*PKPFSPV--HRARKFSHVL 177
           PP+PL    SPP S ++  +R K  P L P+  S V    +R FSH L
Sbjct: 29  PPLPLPPSPSPPPSQQMSSSRQKNTPFLFPRSDSSVLPDPSRFFSHDL 76


>At4g10840.2 68417.m01764 kinesin light chain-related low similarity
           to kinesin light chain [Plectonema boryanum] GI:2645229;
           contains Pfam profile PF00515 TPR Domain
          Length = 531

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 20/65 (30%), Positives = 28/65 (43%)
 Frame = -2

Query: 497 SMPSTTFPKTTCLPSSQEVLTVVMKNWEPLVSAPALAMERTPGPVCLRVKFSSSNLLP*M 318
           +MP     KT   PS    L V + + +PL + P   M++TP     R K S +      
Sbjct: 3   AMPGLVSVKT---PSDTPPLRVAVPDTQPLSNPPRTPMKKTPSSTPSRSKPSPNRSTGKK 59

Query: 317 DFPPV 303
           D P V
Sbjct: 60  DSPTV 64


>At4g10840.1 68417.m01765 kinesin light chain-related low similarity
           to kinesin light chain [Plectonema boryanum] GI:2645229;
           contains Pfam profile PF00515 TPR Domain
          Length = 609

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 20/65 (30%), Positives = 28/65 (43%)
 Frame = -2

Query: 497 SMPSTTFPKTTCLPSSQEVLTVVMKNWEPLVSAPALAMERTPGPVCLRVKFSSSNLLP*M 318
           +MP     KT   PS    L V + + +PL + P   M++TP     R K S +      
Sbjct: 3   AMPGLVSVKT---PSDTPPLRVAVPDTQPLSNPPRTPMKKTPSSTPSRSKPSPNRSTGKK 59

Query: 317 DFPPV 303
           D P V
Sbjct: 60  DSPTV 64


>At3g08840.2 68416.m01026 D-alanine--D-alanine ligase family similar
           to D-alanine--D-alanine ligase (EC 6.3.2.4)
           (D-alanylalanine synthetase) (D-Ala-D-Ala ligase)
           (Swiss-Prot:O51218) [Borrelia burgdorferi]; similar to
           D-alanine--D-alanine ligase (EC 6.3.2.4)
           (D-alanylalanine synthetase) (D-Ala-D-Ala ligase).
           (Swiss-Prot:P95803) [Streptococcus mutans]
          Length = 937

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 12/29 (41%), Positives = 19/29 (65%)
 Frame = -1

Query: 378 DARSSVLKGEILVFKLIAVDGLSPSAVMV 292
           DA   V  GE+LV ++  V G++PS V++
Sbjct: 881 DAFVHVETGEVLVIEVNTVPGMTPSTVLI 909


>At3g04140.1 68416.m00438 ankyrin repeat family protein contains
           ankyrin repeats, Pfam:PF00023
          Length = 656

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = +2

Query: 233 RAPFSIVSSPISCCKEGTSPTITALGESPSTAISLK 340
           R P   + SP SC +    P  T  G+ PS ++ LK
Sbjct: 520 RVPLREMYSPSSCSRGKAFPMRTESGDLPSLSVRLK 555


>At2g33420.1 68415.m04096 expressed protein
          Length = 1039

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 19/68 (27%), Positives = 27/68 (39%)
 Frame = +1

Query: 133 PLGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGG 312
           P GK+    R D+     E F   C    GFG + ++      N     GD     G+GG
Sbjct: 32  PFGKLEGLDRDDIRETAYEIFFTACRSSPGFGGRTALTFYSNHNSNDHHGDGGGGIGSGG 91

Query: 313 KSIYGNKF 336
            +  G+ F
Sbjct: 92  STGVGSGF 99


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,739,843
Number of Sequences: 28952
Number of extensions: 326474
Number of successful extensions: 1085
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 990
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1044
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1003808112
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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