Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11d17
         (570 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g02950.2 68414.m00263 glutathione S-transferase, putative sim...    29   2.2  
At1g02950.1 68414.m00262 glutathione S-transferase, putative sim...    29   2.2  
At5g35430.1 68418.m04213 expressed protein                             29   2.9  
At1g13910.1 68414.m01632 leucine-rich repeat family protein cont...    28   5.0  
At1g51280.1 68414.m05767 disease resistance protein (TIR class),...    27   6.7  
At4g16820.1 68417.m02539 lipase class 3 family protein similar t...    27   8.8  
At3g48290.1 68416.m05270 cytochrome P450, putative very strong s...    27   8.8  
At1g21910.1 68414.m02742 AP2 domain-containing transcription fac...    27   8.8  

>At1g02950.2 68414.m00263 glutathione S-transferase, putative
           similar to glutathione-S-transferase GI:169887 from
           [Silene vulgaris]
          Length = 245

 Score = 29.1 bits (62), Expect = 2.2
 Identities = 20/66 (30%), Positives = 32/66 (48%)
 Frame = +1

Query: 124 KDRDEPAFLAHQCFLKKDYTAALQHLSDLENLVGTSNKRVQHNKAVVEFMAGEMKNVEKF 303
           K  +E  FLA   F   D    L HL +++ L+GT  K++   ++ V     E+ + E +
Sbjct: 174 KRLEESRFLACNSFTLVD----LHHLPNIQYLLGTPTKKLFEKRSKVRKWVDEITSREAW 229

Query: 304 KNAITQ 321
           K A  Q
Sbjct: 230 KMACDQ 235


>At1g02950.1 68414.m00262 glutathione S-transferase, putative
           similar to glutathione-S-transferase GI:169887 from
           [Silene vulgaris]
          Length = 243

 Score = 29.1 bits (62), Expect = 2.2
 Identities = 20/66 (30%), Positives = 32/66 (48%)
 Frame = +1

Query: 124 KDRDEPAFLAHQCFLKKDYTAALQHLSDLENLVGTSNKRVQHNKAVVEFMAGEMKNVEKF 303
           K  +E  FLA   F   D    L HL +++ L+GT  K++   ++ V     E+ + E +
Sbjct: 172 KRLEESRFLACNSFTLVD----LHHLPNIQYLLGTPTKKLFEKRSKVRKWVDEITSREAW 227

Query: 304 KNAITQ 321
           K A  Q
Sbjct: 228 KMACDQ 233


>At5g35430.1 68418.m04213 expressed protein
          Length = 786

 Score = 28.7 bits (61), Expect = 2.9
 Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
 Frame = +1

Query: 385 NYAVILFHSRYYYQCVVILEKLLSSKSIKDARLLQQIILLMLEATI-CR 528
           N AV  FH  +Y +   ILE L  +    D  +  QI  L+L+ ++ CR
Sbjct: 130 NIAVTWFHLYHYSKSFSILEPLFQNIQRLDETIALQICFLLLDISLACR 178


>At1g13910.1 68414.m01632 leucine-rich repeat family protein
           contains leucine rich-repeat (LRR) domains Pfam:PF00560,
           INTERPRO:IPR001611; contains similarity to Hcr2-0A
           [Lycopersicon esculentum] gi|3894385|gb|AAC78592
          Length = 330

 Score = 27.9 bits (59), Expect = 5.0
 Identities = 16/50 (32%), Positives = 23/50 (46%)
 Frame = +1

Query: 223 GTSNKRVQHNKAVVEFMAGEMKNVEKFKNAITQLSGLNYLDVEVKDMTSP 372
           G +  +V   + VV+     M  V  F  AIT+L  L  LD+    +T P
Sbjct: 67  GVTCSKVGDYRVVVKLEVYSMSIVGNFPKAITKLLDLTVLDMHNNKLTGP 116


>At1g51280.1 68414.m05767 disease resistance protein (TIR class),
           putative domain signature TIR exists, suggestive of a
           disease resistance protein.
          Length = 240

 Score = 27.5 bits (58), Expect = 6.7
 Identities = 13/47 (27%), Positives = 23/47 (48%)
 Frame = +1

Query: 391 AVILFHSRYYYQCVVILEKLLSSKSIKDARLLQQIILLMLEATICRR 531
           AV +F  RY   C  + E +   + ++  +L+   +   L AT C+R
Sbjct: 82  AVAIFSERYTESCWCLDELVKMKEQMEQGKLVVVPVFYRLNATACKR 128


>At4g16820.1 68417.m02539 lipase class 3 family protein similar to
           DEFECTIVE IN ANTHER DEHISCENCE1 [Arabidopsis thaliana]
           GI:16215706; contains Pfam profile PF01764: Lipase
          Length = 517

 Score = 27.1 bits (57), Expect = 8.8
 Identities = 14/48 (29%), Positives = 25/48 (52%)
 Frame = +1

Query: 193 QHLSDLENLVGTSNKRVQHNKAVVEFMAGEMKNVEKFKNAITQLSGLN 336
           +HL +LEN++ TS+  + H    +E +    +   K  +  + L GLN
Sbjct: 44  EHLRNLENVLRTSSNSIDH----IENVTSRQEKTTKNTSTSSLLGGLN 87


>At3g48290.1 68416.m05270 cytochrome P450, putative very strong
           similarity to Cytochrome P450 71A24
           (SP:Q9STK9)[Arabidopsis thaliana];
          Length = 488

 Score = 27.1 bits (57), Expect = 8.8
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -3

Query: 175 PFLRNIGELKKQVHRDLCCLTFFY 104
           P +RN+ +L +  HR LC L+  Y
Sbjct: 41  PLIRNLHQLGRHPHRSLCSLSHRY 64


>At1g21910.1 68414.m02742 AP2 domain-containing transcription factor
           family protein similar to TINY GB:CAA64359 GI:1246403
           from [Arabidopsis thaliana]
          Length = 230

 Score = 27.1 bits (57), Expect = 8.8
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = -2

Query: 356 LTSTSK*FNPDNCVMAFLNFSTFFISPAINSTTAL 252
           + STS  ++  N +  F N + F  SP +NSTT L
Sbjct: 180 MDSTSSWYDDHNGMFLFDNGAPFNYSPQLNSTTML 214


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,262,819
Number of Sequences: 28952
Number of extensions: 219450
Number of successful extensions: 512
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 501
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 512
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1102220672
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)