Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11d16
         (625 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   2.7  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    22   4.8  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   8.4  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    21   8.4  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -1

Query: 82  RCKYLEYATKICEY 41
           RCK+ E+ TK+ E+
Sbjct: 743 RCKFSEFMTKLLEF 756


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 14/65 (21%), Positives = 30/65 (46%)
 Frame = +2

Query: 20  WIIKLLTIFAYFGSVF*IFATKFIV*CVYNRQELRKIFKMRLPKPKTNILKTGCCLVCKN 199
           + ++    +A F   F I+A   ++   Y  + +  +   +L    +N+LK+ C  +C  
Sbjct: 144 YAVEFFQFYAQFIVYFLIYAVLEMLLQKY--KTVTYVMTGQLKAQNSNLLKSVCADLCLL 201

Query: 200 KICID 214
             C+D
Sbjct: 202 SECVD 206


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 7/25 (28%), Positives = 16/25 (64%)
 Frame = -2

Query: 267 AYVTLSRLNLRIICADFVSMQILFL 193
           A++  +   L ++C D+ ++ +LFL
Sbjct: 185 AFIFFNMHLLFLLCLDYFTLHLLFL 209


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 8/35 (22%), Positives = 17/35 (48%)
 Frame = -1

Query: 244 KSTHNLCRFCVNADFIFTHQTAASLQYVCFRFWKP 140
           ++ H+L RFC   +  +  + +  L+  C +   P
Sbjct: 5   EAVHSLERFCTYGNVNYRQRRSQPLKISCLKTTPP 39


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,270
Number of Sequences: 336
Number of extensions: 3473
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15979473
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)