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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11d16
         (625 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_4414| Best HMM Match : No HMM Matches (HMM E-Value=.)               29   2.3  
SB_39840| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   9.4  

>SB_4414| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 877

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = +2

Query: 143 LPKPKTNILKTGCCLVCKNKICIDTKSAQIMRRF 244
           L K + +  KTGCC+   N  C+ T   +  R F
Sbjct: 514 LEKERVDESKTGCCIKTDNSGCMQTSRTECSRAF 547


>SB_39840| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 97

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 18/58 (31%), Positives = 25/58 (43%)
 Frame = -1

Query: 349 WHAAICFINSELFGTVHQLANTPCYTTSICHVV*IKSTHNLCRFCVNADFIFTHQTAA 176
           +H  IC +N++     H   N  C  T   H       HN    CVN DF+  + TA+
Sbjct: 7   YHNNIC-VNTDFLHVYH---NNICVNTDFLHAY-----HN--NICVNTDFLHAYHTAS 53


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,058,878
Number of Sequences: 59808
Number of extensions: 385106
Number of successful extensions: 663
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 594
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 661
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1548368000
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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