Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11d15
         (707 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    25   0.80 
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    24   1.4  
AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock prote...    22   4.3  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    22   5.6  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    22   5.6  
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       21   7.4  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   7.4  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    21   9.8  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   9.8  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   9.8  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   9.8  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   9.8  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   9.8  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 24.6 bits (51), Expect = 0.80
 Identities = 11/24 (45%), Positives = 14/24 (58%), Gaps = 2/24 (8%)
 Frame = -1

Query: 431 CTIKHI--FNQYQILAHVFLSFFS 366
           CT+  +  FN YQ LAH    FF+
Sbjct: 508 CTVLRVQRFNNYQSLAHYLRVFFT 531


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory
          receptor candidate 23 protein.
          Length = 291

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = -3

Query: 81 NTRKTYFWINYC 46
          NT + Y+W+N C
Sbjct: 50 NTNRKYYWLNVC 61


>AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock protein
           70 protein.
          Length = 195

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 18/58 (31%), Positives = 27/58 (46%)
 Frame = -1

Query: 314 KLRRAFLRLTKERHSIKATWAGDISNYVYIRLYFDFHENVREAKFDKLKATANLAGLK 141
           KLRR   +  ++  S+  T    I N +     +DF E +  AKF++L     L  LK
Sbjct: 89  KLRREVEKAKRDLSSVHKTTL-TIENLL---ADYDFSETLTRAKFEELNNDQFLKTLK 142


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 9/31 (29%), Positives = 16/31 (51%)
 Frame = -2

Query: 562 WATSFFPSKSIRFKFCIKSSNKLVLYISCAN 470
           W + +  +K    +  +  +NKLVL + C N
Sbjct: 152 WLSRYSWAKVFLVEHILVQTNKLVLALECNN 182


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 9/31 (29%), Positives = 16/31 (51%)
 Frame = -2

Query: 562 WATSFFPSKSIRFKFCIKSSNKLVLYISCAN 470
           W + +  +K    +  +  +NKLVL + C N
Sbjct: 152 WLSRYSWAKVFLVEHILVQTNKLVLALECNN 182


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -1

Query: 464 NNDICLWFCIRCTIKHIFNQYQILAH 387
           +ND+CL       IK +   +Q+L H
Sbjct: 117 SNDVCLAIPESLVIKLVDYHHQLLGH 142


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 5/11 (45%), Positives = 9/11 (81%)
 Frame = -3

Query: 63  FWINYCNFQYH 31
           FW+ +C+F +H
Sbjct: 666 FWLFHCHFLFH 676


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 11/28 (39%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
 Frame = +3

Query: 147 TSQVGS-RF*FVKFRFPNILVEIEVQSY 227
           T  V S R  +++  FPN   + EVQ Y
Sbjct: 17  TDNVSSTRTKYLRTNFPNFYNDFEVQRY 44


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = -1

Query: 92  NRLKTHVKLTFG*IIVIFNITTIHTN 15
           N++  +V +  G ++   NIT IHTN
Sbjct: 460 NQIGQYVTVN-GDVVSHLNITAIHTN 484


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -1

Query: 83  KTHVKLTFG*IIVIFNITTIHTNGTA 6
           K+  K  F   +++F   T+HT G A
Sbjct: 157 KSSKKPAFSHFLIVFFTETLHTVGIA 182


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -1

Query: 83  KTHVKLTFG*IIVIFNITTIHTNGTA 6
           K+  K  F   +++F   T+HT G A
Sbjct: 157 KSSKKPAFSHFLIVFFTETLHTVGIA 182


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -1

Query: 83  KTHVKLTFG*IIVIFNITTIHTNGTA 6
           K+  K  F   +++F   T+HT G A
Sbjct: 157 KSSKKPAFSHFLIVFFTETLHTVGIA 182


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -1

Query: 83  KTHVKLTFG*IIVIFNITTIHTNGTA 6
           K+  K  F   +++F   T+HT G A
Sbjct: 157 KSSKKPAFSHFLIVFFTETLHTVGIA 182


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,068
Number of Sequences: 336
Number of extensions: 3558
Number of successful extensions: 21
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18738900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)