BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bmov11d15 (707 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 07_03_1064 + 23700662-23700787,23701709-23701870,23701983-237021... 90 2e-18 07_03_1492 + 26960876-26960986,26961910-26962074,26962153-269622... 77 1e-14 03_01_0512 - 3849275-3849333,3849429-3849531,3849610-3849654,384... 68 8e-12 03_03_0021 + 13808274-13808384,13809036-13809200,13809249-138092... 57 1e-08 04_03_0695 + 18790491-18790565,18791299-18791427,18792981-18794189 29 4.8 02_04_0481 + 23284296-23284448,23284553-23284753,23284855-232879... 28 8.4 >07_03_1064 + 23700662-23700787,23701709-23701870,23701983-23702101, 23703128-23703202,23704387-23704480,23704856-23704915, 23705083-23705151,23705457-23705555,23706201-23706245, 23706339-23706441,23706665-23706723 Length = 336 Score = 89.8 bits (213), Expect = 2e-18 Identities = 49/149 (32%), Positives = 85/149 (57%), Gaps = 6/149 (4%) Frame = +3 Query: 279 LFGKSQKSPAELVRSLKDAVTALER------GDKKAEKAQEDVSKNLVLIKNMLYGTSDA 440 LF ++PA++VR ++ + L+ GD K E+ ++SKN+ +K++LYG ++ Sbjct: 4 LFKSKPRTPADVVRQTRELLIFLDLHSGSRGGDAKREEKMAELSKNIRELKSILYGNGES 63 Query: 441 EPQTDIIVAQLAQEMYXXXXXXXXXXXXXRIDFEGKKDVAQVFNNVLRRQIGTRSPTVEY 620 EP T+ V QL QE + +++ E +KD QV N+ R+Q+ ++ EY Sbjct: 64 EPVTEACV-QLTQEFFRENTLRLLIICLPKLNLETRKDATQVVANLQRQQVSSKIVASEY 122 Query: 621 ICTKPEILFTLMSGYEHQEIASNCGTMLR 707 + ++L TL+SGYE+ +IA + G+MLR Sbjct: 123 LEANKDLLDTLISGYENMDIALHYGSMLR 151 >07_03_1492 + 26960876-26960986,26961910-26962074,26962153-26962271, 26962559-26962633,26963063-26963156,26963239-26963298, 26963474-26963539,26963622-26963720,26964027-26964035 Length = 265 Score = 77.4 bits (182), Expect = 1e-14 Identities = 45/139 (32%), Positives = 79/139 (56%) Frame = +3 Query: 291 SQKSPAELVRSLKDAVTALERGDKKAEKAQEDVSKNLVLIKNMLYGTSDAEPQTDIIVAQ 470 ++ SP ELVRS+K+++ AL+ + KA EDV KN+ ++ L G + EP + ++ Q Sbjct: 12 ARPSPQELVRSIKESLLALDT--RTGAKALEDVEKNVSTLRQTLSGDGEVEPNQEQVL-Q 68 Query: 471 LAQEMYXXXXXXXXXXXXXRIDFEGKKDVAQVFNNVLRRQIGTRSPTVEYICTKPEILFT 650 +A E+ + +EG+KD+A ++ +LR+++ V+YI ++L Sbjct: 69 IALEICKEDVLSLFVQNMPSLGWEGRKDLAHCWSILLRQKVDEAYCCVQYIENHFDLLDF 128 Query: 651 LMSGYEHQEIASNCGTMLR 707 L+ Y++ E+A NCG MLR Sbjct: 129 LVVCYKNLEVALNCGNMLR 147 >03_01_0512 - 3849275-3849333,3849429-3849531,3849610-3849654, 3849876-3849974,3850078-3850146,3850251-3850310, 3850540-3850633,3850875-3850949,3851101-3851219, 3851433-3851600,3852743-3852928 Length = 358 Score = 67.7 bits (158), Expect = 8e-12 Identities = 46/153 (30%), Positives = 78/153 (50%), Gaps = 10/153 (6%) Frame = +3 Query: 279 LFGKSQKSPAELVRSLKDAVTALER-----GDK---KAEKAQEDVSKNLVLIKNMLYGTS 434 LF + P E+VR ++ + L GDK K E D++K++ +K++LYG Sbjct: 22 LFRSKARGPVEVVRHARELLAFLAENHDACGDKRDVKREHKMVDLAKSIGEMKSILYGNG 81 Query: 435 DAEPQTDIIVAQLAQEMYXXXXXXXXXXXXXR--IDFEGKKDVAQVFNNVLRRQIGTRSP 608 +A+P D +QL +E + +D E +KDV QV N+LR+++ R Sbjct: 82 EADP-VDEACSQLTKEFFKENTNSLHLLVVCLPYMDLETQKDVTQVTANLLRQKVDYRMV 140 Query: 609 TVEYICTKPEILFTLMSGYEHQEIASNCGTMLR 707 +Y+ ++L LMSGY++ +IA + +LR Sbjct: 141 ASDYLEENQDLLDVLMSGYDNMDIAIHYSAILR 173 >03_03_0021 + 13808274-13808384,13809036-13809200,13809249-13809278, 13809279-13809397,13809696-13809770,13812071-13812146, 13813224-13813289,13813364-13813462,13814072-13814174, 13814338-13814411 Length = 305 Score = 57.2 bits (132), Expect = 1e-08 Identities = 43/145 (29%), Positives = 71/145 (48%), Gaps = 9/145 (6%) Frame = +3 Query: 300 SPAELVRSLKDAVTALERGDKKAEKAQEDVSKNLVLIKNMLYGTSDAEP---QTDIIVAQ 470 +P E+VRS+KD+ AL K +A E+V KNL ++ ML G +AEP Q I + Sbjct: 15 TPEEVVRSIKDSFQALHT--KNGARALEEVEKNLSSLRQMLSGDGEAEPNQEQVLQITLE 72 Query: 471 LAQE------MYXXXXXXXXXXXXXRIDFEGKKDVAQVFNNVLRRQIGTRSPTVEYICTK 632 + +E + + + +KD+ + +LR++ V+YI Sbjct: 73 ICKEDVLSLFVQNLPSLGWGPVEIVSSELQVRKDLVHCWCILLRQKFDESYCCVKYIENH 132 Query: 633 PEILFTLMSGYEHQEIASNCGTMLR 707 E+L L+ Y++ ++A NCG MLR Sbjct: 133 LELLDFLVGCYKNLDVALNCGNMLR 157 >04_03_0695 + 18790491-18790565,18791299-18791427,18792981-18794189 Length = 470 Score = 28.7 bits (61), Expect = 4.8 Identities = 13/43 (30%), Positives = 25/43 (58%) Frame = +3 Query: 285 GKSQKSPAELVRSLKDAVTALERGDKKAEKAQEDVSKNLVLIK 413 G+ +K EL+R + + +E K+ EKAQE++ K +++ Sbjct: 224 GRVEKICTELIRGIGEDKAEVEALKKETEKAQEELQKEREMLQ 266 >02_04_0481 + 23284296-23284448,23284553-23284753,23284855-23287971, 23288510-23289353,23289468-23290120,23290573-23290676, 23290898-23291000 Length = 1724 Score = 27.9 bits (59), Expect = 8.4 Identities = 17/53 (32%), Positives = 26/53 (49%) Frame = +3 Query: 264 LNTMPLFGKSQKSPAELVRSLKDAVTALERGDKKAEKAQEDVSKNLVLIKNML 422 L + FG+ K+ AE ++S+K A+ + KKA+ E V L K L Sbjct: 300 LQKVNTFGEENKNLAEELQSVKAALDVVNAEAKKAKAEFEQVEHKLSTTKEKL 352 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 16,824,126 Number of Sequences: 37544 Number of extensions: 307719 Number of successful extensions: 799 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 767 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 795 length of database: 14,793,348 effective HSP length: 80 effective length of database: 11,789,828 effective search space used: 1827423340 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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