Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11d15
         (707 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY128438-1|AAM75031.1|  339|Drosophila melanogaster LD09950p pro...   219   2e-57
AE014296-2775|AAF49432.1|  339|Drosophila melanogaster CG4083-PA...   219   2e-57
AB000402-1|BAA19098.1|  339|Drosophila melanogaster DMO25 protein.    216   2e-56
U35816-4|AAB09051.1| 1972|Drosophila melanogaster nonmuscle myos...    29   6.2  
U35816-3|AAB09050.1| 2012|Drosophila melanogaster nonmuscle myos...    29   6.2  
U35816-2|AAB09048.1| 2017|Drosophila melanogaster nonmuscle myos...    29   6.2  
U35816-1|AAB09049.1| 2057|Drosophila melanogaster nonmuscle myos...    29   6.2  
M35012-1|AAA28713.1| 1972|Drosophila melanogaster protein ( D.me...    29   6.2  
AE013599-4011|AAM70805.1| 2011|Drosophila melanogaster CG15792-P...    29   6.2  
AE013599-4010|AAX52688.1| 1971|Drosophila melanogaster CG15792-P...    29   6.2  
AE013599-4009|AAF47311.1| 2056|Drosophila melanogaster CG15792-P...    29   6.2  
AE013599-4008|AAX52687.1| 2016|Drosophila melanogaster CG15792-P...    29   6.2  

>AY128438-1|AAM75031.1|  339|Drosophila melanogaster LD09950p
           protein.
          Length = 339

 Score =  219 bits (536), Expect = 2e-57
 Identities = 109/147 (74%), Positives = 119/147 (80%), Gaps = 2/147 (1%)
 Frame = +3

Query: 273 MPLFGKSQKSPAELVRSLKDAVTALERGDKKAEKAQEDVSKNLVLIKNMLYGTSDAEPQT 452
           MPLFGKSQKSP ELV+SLK+A+ ALE GD+K EKAQEDVSKNLV IKNMLYG+SDAEP  
Sbjct: 1   MPLFGKSQKSPVELVKSLKEAINALEAGDRKVEKAQEDVSKNLVSIKNMLYGSSDAEPPA 60

Query: 453 DIIVAQLAQEMYXXXXXXXXXXXXXRIDFEGKKDVAQVFNNVLRRQIGTRSPTVEYICTK 632
           D +VAQL+QE+Y             RIDFEGKK VA +FNNVLRRQIGTRSPTVEYICTK
Sbjct: 61  DYVVAQLSQELYNSNLLLLLIQNLHRIDFEGKKHVALIFNNVLRRQIGTRSPTVEYICTK 120

Query: 633 PEILFTLMSGYE--HQEIASNCGTMLR 707
           PEILFTLM+GYE  H EIA N GTMLR
Sbjct: 121 PEILFTLMAGYEDAHPEIALNSGTMLR 147


>AE014296-2775|AAF49432.1|  339|Drosophila melanogaster CG4083-PA
           protein.
          Length = 339

 Score =  219 bits (536), Expect = 2e-57
 Identities = 109/147 (74%), Positives = 119/147 (80%), Gaps = 2/147 (1%)
 Frame = +3

Query: 273 MPLFGKSQKSPAELVRSLKDAVTALERGDKKAEKAQEDVSKNLVLIKNMLYGTSDAEPQT 452
           MPLFGKSQKSP ELV+SLK+A+ ALE GD+K EKAQEDVSKNLV IKNMLYG+SDAEP  
Sbjct: 1   MPLFGKSQKSPVELVKSLKEAINALEAGDRKVEKAQEDVSKNLVSIKNMLYGSSDAEPPA 60

Query: 453 DIIVAQLAQEMYXXXXXXXXXXXXXRIDFEGKKDVAQVFNNVLRRQIGTRSPTVEYICTK 632
           D +VAQL+QE+Y             RIDFEGKK VA +FNNVLRRQIGTRSPTVEYICTK
Sbjct: 61  DYVVAQLSQELYNSNLLLLLIQNLHRIDFEGKKHVALIFNNVLRRQIGTRSPTVEYICTK 120

Query: 633 PEILFTLMSGYE--HQEIASNCGTMLR 707
           PEILFTLM+GYE  H EIA N GTMLR
Sbjct: 121 PEILFTLMAGYEDAHPEIALNSGTMLR 147


>AB000402-1|BAA19098.1|  339|Drosophila melanogaster DMO25 protein.
          Length = 339

 Score =  216 bits (528), Expect = 2e-56
 Identities = 107/147 (72%), Positives = 119/147 (80%), Gaps = 2/147 (1%)
 Frame = +3

Query: 273 MPLFGKSQKSPAELVRSLKDAVTALERGDKKAEKAQEDVSKNLVLIKNMLYGTSDAEPQT 452
           MPLFGKSQKSP ELV+SLK+A+ ALE GD+K EKAQEDVSKNLV IKNML+G+SDAEP  
Sbjct: 1   MPLFGKSQKSPVELVKSLKEAINALEAGDRKVEKAQEDVSKNLVSIKNMLHGSSDAEPPA 60

Query: 453 DIIVAQLAQEMYXXXXXXXXXXXXXRIDFEGKKDVAQVFNNVLRRQIGTRSPTVEYICTK 632
           D +VAQL+QE+Y             RIDFEGKK VA +FNN+LRRQIGTRSPTVEYICTK
Sbjct: 61  DYVVAQLSQELYNSNLLLLLIQNLHRIDFEGKKHVALIFNNLLRRQIGTRSPTVEYICTK 120

Query: 633 PEILFTLMSGYE--HQEIASNCGTMLR 707
           PEILFTLM+GYE  H EIA N GTMLR
Sbjct: 121 PEILFTLMAGYEDAHPEIALNSGTMLR 147


>U35816-4|AAB09051.1| 1972|Drosophila melanogaster nonmuscle myosin-II
            heavy chain protein.
          Length = 1972

 Score = 29.1 bits (62), Expect = 6.2
 Identities = 16/66 (24%), Positives = 33/66 (50%)
 Frame = +3

Query: 288  KSQKSPAELVRSLKDAVTALERGDKKAEKAQEDVSKNLVLIKNMLYGTSDAEPQTDIIVA 467
            K+Q+     +  +++ + A +    KAEK + D+S+ L  +KN L  + D       + +
Sbjct: 1110 KAQRELESQLAEIQEDLEAEKAARAKAEKVRRDLSEELEALKNELLDSLDTTAAQQELRS 1169

Query: 468  QLAQEM 485
            +  QE+
Sbjct: 1170 KREQEL 1175


>U35816-3|AAB09050.1| 2012|Drosophila melanogaster nonmuscle myosin-II
            heavy chain protein.
          Length = 2012

 Score = 29.1 bits (62), Expect = 6.2
 Identities = 16/66 (24%), Positives = 33/66 (50%)
 Frame = +3

Query: 288  KSQKSPAELVRSLKDAVTALERGDKKAEKAQEDVSKNLVLIKNMLYGTSDAEPQTDIIVA 467
            K+Q+     +  +++ + A +    KAEK + D+S+ L  +KN L  + D       + +
Sbjct: 1150 KAQRELESQLAEIQEDLEAEKAARAKAEKVRRDLSEELEALKNELLDSLDTTAAQQELRS 1209

Query: 468  QLAQEM 485
            +  QE+
Sbjct: 1210 KREQEL 1215


>U35816-2|AAB09048.1| 2017|Drosophila melanogaster nonmuscle myosin-II
            heavy chain protein.
          Length = 2017

 Score = 29.1 bits (62), Expect = 6.2
 Identities = 16/66 (24%), Positives = 33/66 (50%)
 Frame = +3

Query: 288  KSQKSPAELVRSLKDAVTALERGDKKAEKAQEDVSKNLVLIKNMLYGTSDAEPQTDIIVA 467
            K+Q+     +  +++ + A +    KAEK + D+S+ L  +KN L  + D       + +
Sbjct: 1155 KAQRELESQLAEIQEDLEAEKAARAKAEKVRRDLSEELEALKNELLDSLDTTAAQQELRS 1214

Query: 468  QLAQEM 485
            +  QE+
Sbjct: 1215 KREQEL 1220


>U35816-1|AAB09049.1| 2057|Drosophila melanogaster nonmuscle myosin-II
            heavy chain protein.
          Length = 2057

 Score = 29.1 bits (62), Expect = 6.2
 Identities = 16/66 (24%), Positives = 33/66 (50%)
 Frame = +3

Query: 288  KSQKSPAELVRSLKDAVTALERGDKKAEKAQEDVSKNLVLIKNMLYGTSDAEPQTDIIVA 467
            K+Q+     +  +++ + A +    KAEK + D+S+ L  +KN L  + D       + +
Sbjct: 1195 KAQRELESQLAEIQEDLEAEKAARAKAEKVRRDLSEELEALKNELLDSLDTTAAQQELRS 1254

Query: 468  QLAQEM 485
            +  QE+
Sbjct: 1255 KREQEL 1260


>M35012-1|AAA28713.1| 1972|Drosophila melanogaster protein (
            D.melanogaster non-musclemyosin heavy chain mRNA. ).
          Length = 1972

 Score = 29.1 bits (62), Expect = 6.2
 Identities = 16/66 (24%), Positives = 33/66 (50%)
 Frame = +3

Query: 288  KSQKSPAELVRSLKDAVTALERGDKKAEKAQEDVSKNLVLIKNMLYGTSDAEPQTDIIVA 467
            K+Q+     +  +++ + A +    KAEK + D+S+ L  +KN L  + D       + +
Sbjct: 1110 KAQRELESQLAEIQEDLEAEKAARAKAEKVRRDLSEELEALKNELLDSLDTTAAQQELRS 1169

Query: 468  QLAQEM 485
            +  QE+
Sbjct: 1170 KREQEL 1175


>AE013599-4011|AAM70805.1| 2011|Drosophila melanogaster CG15792-PB,
            isoform B protein.
          Length = 2011

 Score = 29.1 bits (62), Expect = 6.2
 Identities = 16/66 (24%), Positives = 33/66 (50%)
 Frame = +3

Query: 288  KSQKSPAELVRSLKDAVTALERGDKKAEKAQEDVSKNLVLIKNMLYGTSDAEPQTDIIVA 467
            K+Q+     +  +++ + A +    KAEK + D+S+ L  +KN L  + D       + +
Sbjct: 1149 KAQRELESQLAEIQEDLEAEKAARAKAEKVRRDLSEELEALKNELLDSLDTTAAQQELRS 1208

Query: 468  QLAQEM 485
            +  QE+
Sbjct: 1209 KREQEL 1214


>AE013599-4010|AAX52688.1| 1971|Drosophila melanogaster CG15792-PC,
            isoform C protein.
          Length = 1971

 Score = 29.1 bits (62), Expect = 6.2
 Identities = 16/66 (24%), Positives = 33/66 (50%)
 Frame = +3

Query: 288  KSQKSPAELVRSLKDAVTALERGDKKAEKAQEDVSKNLVLIKNMLYGTSDAEPQTDIIVA 467
            K+Q+     +  +++ + A +    KAEK + D+S+ L  +KN L  + D       + +
Sbjct: 1109 KAQRELESQLAEIQEDLEAEKAARAKAEKVRRDLSEELEALKNELLDSLDTTAAQQELRS 1168

Query: 468  QLAQEM 485
            +  QE+
Sbjct: 1169 KREQEL 1174


>AE013599-4009|AAF47311.1| 2056|Drosophila melanogaster CG15792-PA,
            isoform A protein.
          Length = 2056

 Score = 29.1 bits (62), Expect = 6.2
 Identities = 16/66 (24%), Positives = 33/66 (50%)
 Frame = +3

Query: 288  KSQKSPAELVRSLKDAVTALERGDKKAEKAQEDVSKNLVLIKNMLYGTSDAEPQTDIIVA 467
            K+Q+     +  +++ + A +    KAEK + D+S+ L  +KN L  + D       + +
Sbjct: 1194 KAQRELESQLAEIQEDLEAEKAARAKAEKVRRDLSEELEALKNELLDSLDTTAAQQELRS 1253

Query: 468  QLAQEM 485
            +  QE+
Sbjct: 1254 KREQEL 1259


>AE013599-4008|AAX52687.1| 2016|Drosophila melanogaster CG15792-PD,
            isoform D protein.
          Length = 2016

 Score = 29.1 bits (62), Expect = 6.2
 Identities = 16/66 (24%), Positives = 33/66 (50%)
 Frame = +3

Query: 288  KSQKSPAELVRSLKDAVTALERGDKKAEKAQEDVSKNLVLIKNMLYGTSDAEPQTDIIVA 467
            K+Q+     +  +++ + A +    KAEK + D+S+ L  +KN L  + D       + +
Sbjct: 1154 KAQRELESQLAEIQEDLEAEKAARAKAEKVRRDLSEELEALKNELLDSLDTTAAQQELRS 1213

Query: 468  QLAQEM 485
            +  QE+
Sbjct: 1214 KREQEL 1219


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,666,920
Number of Sequences: 53049
Number of extensions: 546381
Number of successful extensions: 1062
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1037
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1059
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3128965752
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)