BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov11d14
(478 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_06_0610 - 25449085-25453284 34 0.068
11_05_0052 + 18683077-18683385 33 0.090
01_06_0565 + 30287253-30287502,30287522-30289010,30289133-302892... 33 0.090
12_02_0090 + 13493311-13494180 33 0.12
08_01_0060 - 413088-413999 33 0.12
11_01_0361 + 2772193-2772334,2773457-2773587,2773872-2773985,277... 32 0.21
08_02_1470 - 27350173-27350643,27350721-27351167 31 0.48
03_01_0086 - 699617-699766,699851-699908,699998-700068,700210-70... 31 0.48
09_04_0180 + 15367737-15367755,15368874-15369739 30 0.84
06_01_0378 - 2717010-2717565,2718165-2718229,2718365-2719117 30 0.84
04_04_1487 - 33919654-33920399,33920676-33920817 30 1.1
03_03_0267 + 16041974-16042549 29 1.5
01_01_0715 - 5542648-5543219,5543352-5543544 29 1.5
07_01_0413 - 3155080-3155274,3155628-3155933,3156062-3156163,315... 29 1.9
05_06_0078 - 25412770-25413852 29 1.9
03_02_0489 + 8836306-8836500,8836906-8837082,8837175-8837321,883... 29 1.9
02_04_0144 - 20177136-20177231,20177525-20178010,20178103-20178162 29 1.9
12_02_1164 + 26620779-26621087 29 2.6
11_04_0382 - 17001848-17002237 29 2.6
08_02_0672 - 19904353-19904839,19905646-19905704,19906137-199063... 29 2.6
08_01_0698 + 6162127-6162160,6162317-6162512,6162654-6162699 29 2.6
05_03_0458 + 14280953-14281866,14281964-14282912 29 2.6
03_05_1045 - 29914581-29914829,29914840-29916083,29919055-299191... 29 2.6
02_03_0160 - 15826050-15826462,15826870-15827140,15827242-15827253 29 2.6
12_01_0239 - 1793612-1793716,1793808-1793826,1794424-1794599,179... 28 3.4
10_07_0029 + 12031711-12032464,12044289-12044386 28 3.4
05_01_0364 + 2855760-2855801,2855940-2856015,2856759-2857747 28 3.4
05_01_0004 - 34967-35149,35340-35501,36078-36225,36309-36385,365... 28 3.4
04_01_0083 + 904473-905167,905247-905347,905902-905994,907322-90... 28 3.4
03_06_0519 - 34481751-34482722 28 3.4
02_03_0237 - 16723400-16723594,16723658-16723712,16724016-167241... 28 3.4
02_02_0363 + 9446055-9446524,9446658-9446771,9446856-9447281,944... 28 3.4
11_06_0377 - 22900042-22900452,22900527-22902236 28 4.5
11_01_0242 - 1862106-1862210,1862302-1862320,1863082-1863257,186... 28 4.5
07_01_0729 - 5560405-5561235 28 4.5
06_03_0854 + 25400855-25403741,25406174-25407708 28 4.5
06_03_0778 - 24523780-24526353 28 4.5
06_01_1050 + 8262033-8262165,8262262-8262391,8262486-8263026 28 4.5
06_01_0039 - 386576-387098,387173-387468,387744-388067,388165-38... 27 5.9
05_07_0200 - 28368890-28369021,28369169-28369303,28369918-283699... 27 5.9
04_04_1125 + 31085106-31085714 27 5.9
03_05_0953 + 29111030-29111105,29112250-29113520 27 5.9
03_05_0217 - 22056301-22056648 27 5.9
02_03_0361 - 18125504-18126250,18126381-18126543,18126713-18126942 27 5.9
02_02_0628 + 12365109-12365150,12366315-12366411,12366489-123665... 27 5.9
01_01_1037 + 8192541-8193179 27 5.9
12_02_0813 - 23386062-23386158,23386326-23386409,23386688-23386743 27 7.8
10_01_0267 - 2828966-2829340,2831164-2831629,2833390-2833487,283... 27 7.8
07_03_1523 + 27432991-27433199,27433585-27434185,27434468-274346... 27 7.8
03_05_0851 + 28225608-28226570 27 7.8
03_04_0023 + 16537257-16537272,16537515-16537929,16538404-165384... 27 7.8
02_02_0079 - 6594365-6594757 27 7.8
01_07_0291 + 42555233-42555444,42556515-42556550,42556652-425567... 27 7.8
01_04_0054 - 15456668-15459691 27 7.8
01_02_0089 - 10997882-10997957,10998139-10998423,10998519-109985... 27 7.8
01_01_1096 - 8659091-8659459,8660730-8661050,8661416-8661694,866... 27 7.8
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 33.9 bits (74), Expect = 0.068
Identities = 20/56 (35%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
Frame = -2
Query: 396 YGEPPHPQVG--PHAPEMETEPTAQAGPANSTAPMTGTCPNTAAEPATGSSPATAT 235
YG PP P G P +PE + P QA P +P ++ P G SP T T
Sbjct: 508 YGAPPPPSSGWLPKSPERKKAPPPQAEPPTEYSP---PATPESSPPPEGKSPPTPT 560
>11_05_0052 + 18683077-18683385
Length = 102
Score = 33.5 bits (73), Expect = 0.090
Identities = 19/60 (31%), Positives = 27/60 (45%)
Frame = -1
Query: 400 IVWRAAASAGGSTCARDGDRTDSAGRTRELNRADDGHLSQYSGGAGHGELASHGHVTDAG 221
+V + AA+A CA G R R AD + + GG+G GE+ +H T G
Sbjct: 8 VVGKGAAAALHGRCAEFGGGGGGIQRRRRTGAADPTTVMRRGGGSGDGEVRAHPPCTACG 67
>01_06_0565 +
30287253-30287502,30287522-30289010,30289133-30289277,
30289679-30289729
Length = 644
Score = 33.5 bits (73), Expect = 0.090
Identities = 18/51 (35%), Positives = 24/51 (47%)
Frame = -2
Query: 393 GEPPHPQVGPHAPEMETEPTAQAGPANSTAPMTGTCPNTAAEPATGSSPAT 241
G P P P +P +T PT G T + T P+ P++GSSP T
Sbjct: 226 GYTPTPSDAPPSPSSDTSPTTPGGGGGYTPTPSDTPPS----PSSGSSPTT 272
Score = 33.1 bits (72), Expect = 0.12
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Frame = -2
Query: 387 PPHPQVG--PHAPEMETEPTAQAGPANSTAPMTGTCPNTAAEPAT 259
PP P +G P +P +T PT G + ST T P++ P T
Sbjct: 329 PPTPSIGDVPPSPSSDTSPTTPGGGSPSTPCDTPPSPSSGTSPTT 373
Score = 32.7 bits (71), Expect = 0.16
Identities = 17/49 (34%), Positives = 23/49 (46%)
Frame = -2
Query: 387 PPHPQVGPHAPEMETEPTAQAGPANSTAPMTGTCPNTAAEPATGSSPAT 241
P P P +P +T PT G AP G P P++G+SP+T
Sbjct: 433 PSTPCNAPPSPSSDTSPTTPGGGNYPPAPTIGNVP---PSPSSGTSPST 478
Score = 32.3 bits (70), Expect = 0.21
Identities = 18/51 (35%), Positives = 22/51 (43%)
Frame = -2
Query: 393 GEPPHPQVGPHAPEMETEPTAQAGPANSTAPMTGTCPNTAAEPATGSSPAT 241
G P P P +P T PT G P G P PA+G+SP+T
Sbjct: 353 GSPSTPCDTPPSPSSGTSPTTPGGGYYPPTPSVGDVP---PSPASGTSPST 400
Score = 30.3 bits (65), Expect = 0.84
Identities = 16/43 (37%), Positives = 19/43 (44%)
Frame = -2
Query: 384 PHPQVGPHAPEMETEPTAQAGPANSTAPMTGTCPNTAAEPATG 256
P P P +P +T PT G P GT P+T P TG
Sbjct: 487 PTPCDAPPSPSSDTSPTTPGGGYYPPTPSIGTSPST---PGTG 526
Score = 27.5 bits (58), Expect = 5.9
Identities = 16/51 (31%), Positives = 21/51 (41%)
Frame = -2
Query: 393 GEPPHPQVGPHAPEMETEPTAQAGPANSTAPMTGTCPNTAAEPATGSSPAT 241
G P P P +P +T PT G T P P P++ +SP T
Sbjct: 200 GYTPTPSDAPPSPSSDTSPTTPGGGGGYT-PTPSDAP---PSPSSDTSPTT 246
Score = 27.1 bits (57), Expect = 7.8
Identities = 16/48 (33%), Positives = 19/48 (39%)
Frame = -2
Query: 384 PHPQVGPHAPEMETEPTAQAGPANSTAPMTGTCPNTAAEPATGSSPAT 241
P P P AP T PT G P G P P++ +SP T
Sbjct: 305 PTPCGTPPAPSSGTSPTTPGGSYYPPTPSIGDVP---PSPSSDTSPTT 349
>12_02_0090 + 13493311-13494180
Length = 289
Score = 33.1 bits (72), Expect = 0.12
Identities = 19/53 (35%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
Frame = -2
Query: 387 PPHPQVGPHAPEMETEPTAQAGPANSTAPMTGTCPN--TAAEPATGSSPATAT 235
P H Q P P+A + TAP T P+ T PAT S+P AT
Sbjct: 63 PAHKQAATPIPATTRRPSAVVATSTPTAPSQTTAPSLATILVPATTSAPKPAT 115
>08_01_0060 - 413088-413999
Length = 303
Score = 33.1 bits (72), Expect = 0.12
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +2
Query: 254 LPVAGSAAVLGQVPVIGAVEFAGPACAVGSVSISGACGPTCGCGG 388
LP+ G ++ V + V+ GP + S S+ GA G GCGG
Sbjct: 250 LPLGGGGPMIDWVGLTRPVDIHGPTSSSSSSSMGGALGFGFGCGG 294
>11_01_0361 +
2772193-2772334,2773457-2773587,2773872-2773985,
2774303-2774459,2774577-2775000,2775238-2776030,
2776182-2776241,2776952-2777593
Length = 820
Score = 32.3 bits (70), Expect = 0.21
Identities = 22/77 (28%), Positives = 33/77 (42%)
Frame = -1
Query: 391 RAAASAGGSTCARDGDRTDSAGRTRELNRADDGHLSQYSGGAGHGELASHGHVTDAGAAV 212
R + GG R G + A R R + DD H++ + A + A A +
Sbjct: 630 RDRLAVGGVLRRRRGAGREPAVRQRVRDVPDDMHVAAAAASARAAVVVVAVDAVRAAAVL 689
Query: 211 PSTAAVPDRAVPRSTEG 161
++AAVPD A P + G
Sbjct: 690 GASAAVPDAAAPAAISG 706
>08_02_1470 - 27350173-27350643,27350721-27351167
Length = 305
Score = 31.1 bits (67), Expect = 0.48
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = -2
Query: 375 QVGPHAPEMETEPTAQAGPAN-STAPMTGTCPNTAAEPATGSSPATAT 235
Q P AP T P Q A+ + + + P+T++ P T +PAT T
Sbjct: 245 QFQPPAPATATAPAPQTATASWESFDLLSSVPSTSSAPVTTMAPATTT 292
>03_01_0086 -
699617-699766,699851-699908,699998-700068,700210-700286,
700384-700466,700545-700604,700848-700983,701056-701126,
701248-701339,701454-701551,701891-702043,702146-702311,
702457-702885,703076-703157,703245-703504
Length = 661
Score = 31.1 bits (67), Expect = 0.48
Identities = 20/41 (48%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +2
Query: 272 AAVLGQ-VPVIGAVEFAGPACAVGSVSISGACGPTCGCGGS 391
A LG VPVIGA FA A A GSV+ S A + G G+
Sbjct: 327 APTLGTLVPVIGASGFAAMATAAGSVAGSVAVAASFGAAGA 367
>09_04_0180 + 15367737-15367755,15368874-15369739
Length = 294
Score = 30.3 bits (65), Expect = 0.84
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = -2
Query: 384 PHPQVGPHAPEMETEPTAQAGPANSTAPMTGTCPNTAAEP 265
P P P PE++ EP A+ P P P+T EP
Sbjct: 84 PAPSPIPRPPELDPEPKAETDPEADPKPGLDPEPDTNVEP 123
Score = 27.5 bits (58), Expect = 5.9
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = -2
Query: 387 PPHPQVGPHAPEMETEPTAQAGPANSTAPMTGTCPNTAAEP 265
P P++ P P+ ET+P A P P T P+ EP
Sbjct: 90 PRPPELDPE-PKAETDPEADPKPGLDPEPDTNVEPDLELEP 129
>06_01_0378 - 2717010-2717565,2718165-2718229,2718365-2719117
Length = 457
Score = 30.3 bits (65), Expect = 0.84
Identities = 17/51 (33%), Positives = 22/51 (43%), Gaps = 3/51 (5%)
Frame = -2
Query: 381 HPQVGPHAPEMETEPTAQAG---PANSTAPMTGTCPNTAAEPATGSSPATA 238
HP P + T P G A +T P T P ++PATG PA +
Sbjct: 10 HPHHNISTPPLMTLPPFSCGNGTAAPATCPATPPSPPPTSKPATGGEPAAS 60
>04_04_1487 - 33919654-33920399,33920676-33920817
Length = 295
Score = 29.9 bits (64), Expect = 1.1
Identities = 22/56 (39%), Positives = 23/56 (41%), Gaps = 1/56 (1%)
Frame = -1
Query: 391 RAAASAGGSTCARDGDRTDSAGRTRELNRADDGHLSQYSG-GAGHGELASHGHVTD 227
R A AGG GD T GR REL AD G G G+ EL H D
Sbjct: 99 RELADAGGEKVGEGGDGTIGGGRAREL--ADAGGEKVGEGENPGNDELEQLFHTVD 152
>03_03_0267 + 16041974-16042549
Length = 191
Score = 29.5 bits (63), Expect = 1.5
Identities = 22/63 (34%), Positives = 27/63 (42%), Gaps = 4/63 (6%)
Frame = -1
Query: 373 GGSTCARDGDRTDSAGRTRELN----RADDGHLSQYSGGAGHGELASHGHVTDAGAAVPS 206
GG RD D T + R R ++ + D Y GG G GEL S G GA +P
Sbjct: 28 GGDYGGRDHDVTVAPRRLRSVSLRHGKIIDSIAFTYDGGDGDGELHSVGPWGGDGAELPE 87
Query: 205 TAA 197
A
Sbjct: 88 AVA 90
>01_01_0715 - 5542648-5543219,5543352-5543544
Length = 254
Score = 29.5 bits (63), Expect = 1.5
Identities = 19/50 (38%), Positives = 22/50 (44%)
Frame = -2
Query: 393 GEPPHPQVGPHAPEMETEPTAQAGPANSTAPMTGTCPNTAAEPATGSSPA 244
G PP P P T P+ AG N TAP GT A P S+P+
Sbjct: 186 GSPPPPPPPPAGGNF-TAPSP-AGGMNFTAPAPGTNGTAAPPPRPSSAPS 233
>07_01_0413 -
3155080-3155274,3155628-3155933,3156062-3156163,
3156262-3156705
Length = 348
Score = 29.1 bits (62), Expect = 1.9
Identities = 17/34 (50%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = -1
Query: 355 RDGDRT-DSAGRTRELNRADDGHLSQYSGGAGHG 257
R G+R SA TRE NR DDG Y+G G G
Sbjct: 198 RGGERAVGSAAATRE-NRRDDGTFKIYAGNLGWG 230
>05_06_0078 - 25412770-25413852
Length = 360
Score = 29.1 bits (62), Expect = 1.9
Identities = 21/59 (35%), Positives = 23/59 (38%)
Frame = -1
Query: 391 RAAASAGGSTCARDGDRTDSAGRTRELNRADDGHLSQYSGGAGHGELASHGHVTDAGAA 215
R G RDG TD G A DG +GG+G G G V AGAA
Sbjct: 36 RPPPGGDGVKIGRDGGATDGDGEGDGSREAGDGAGGDRAGGSGVG----GGFVVGAGAA 90
>03_02_0489 +
8836306-8836500,8836906-8837082,8837175-8837321,
8837636-8837737,8837824-8837894,8837992-8838059,
8838595-8838836
Length = 333
Score = 29.1 bits (62), Expect = 1.9
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = -2
Query: 390 EPPHPQVGPHAPEMETEPTAQAGPANSTAPMTGTCP 283
+PP PQ+ H P++ T P AG T T P
Sbjct: 21 QPPPPQLHHHQPQLGTVPHLLAGGVAGAVSKTCTAP 56
>02_04_0144 - 20177136-20177231,20177525-20178010,20178103-20178162
Length = 213
Score = 29.1 bits (62), Expect = 1.9
Identities = 18/52 (34%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Frame = -1
Query: 307 RADDGHLSQYSGGAGHGELA-SHGHVTDAGAAVPSTAAVPDRAVPRSTEGSA 155
R ++ H GG+ H A HGH A A PS++ P RA SA
Sbjct: 88 RGEERHTGGGGGGSHHAHYAHGHGHA-HAAAPSPSSSWAPARAPSPDASASA 138
>12_02_1164 + 26620779-26621087
Length = 102
Score = 28.7 bits (61), Expect = 2.6
Identities = 22/71 (30%), Positives = 26/71 (36%), Gaps = 4/71 (5%)
Frame = -1
Query: 394 WRAAASAGGSTCARDGDRTDSAGRTRELNR----ADDGHLSQYSGGAGHGELASHGHVTD 227
W AS C + D GR E++ A G Q AGHGE G V
Sbjct: 13 WHRYASGPRGRCGEEDQGGDVVGRHEEVHGDGGVAGCGEEEQGGDAAGHGEEEQGGGVAR 72
Query: 226 AGAAVPSTAAV 194
V +AAV
Sbjct: 73 RREEVHGSAAV 83
>11_04_0382 - 17001848-17002237
Length = 129
Score = 28.7 bits (61), Expect = 2.6
Identities = 27/77 (35%), Positives = 29/77 (37%), Gaps = 3/77 (3%)
Frame = -1
Query: 391 RAAASAGGSTCARDGDRT---DSAGRTRELNRADDGHLSQYSGGAGHGELASHGHVTDAG 221
R +A G CA R DS R R DG GG GHG + V AG
Sbjct: 13 RQPGAAVGRVCAAHDGRCVACDSMVRPAAPARVCDGCSG---GGGGHGSRSERCLVCGAG 69
Query: 220 AAVPSTAAVPDRAVPRS 170
A AAV D RS
Sbjct: 70 AGEGGAAAVADAYYCRS 86
>08_02_0672 -
19904353-19904839,19905646-19905704,19906137-19906352,
19906845-19907422,19907506-19908180,19908263-19908653,
19909469-19909621,19909727-19909980,19911023-19911479
Length = 1089
Score = 28.7 bits (61), Expect = 2.6
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = -2
Query: 357 PEMETEPTAQAGPANSTAPMTGTCPNTAAEP 265
P T PTA AG P T T PN A P
Sbjct: 13 PPPATPPTAAAGTPPLAVPATNTPPNPATTP 43
>08_01_0698 + 6162127-6162160,6162317-6162512,6162654-6162699
Length = 91
Score = 28.7 bits (61), Expect = 2.6
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = -1
Query: 298 DGHLSQYSGGAGHGELASHGH 236
DG QY GAG GE S GH
Sbjct: 43 DGPQEQYPAGAGAGETTSRGH 63
>05_03_0458 + 14280953-14281866,14281964-14282912
Length = 620
Score = 28.7 bits (61), Expect = 2.6
Identities = 12/44 (27%), Positives = 22/44 (50%)
Frame = -2
Query: 369 GPHAPEMETEPTAQAGPANSTAPMTGTCPNTAAEPATGSSPATA 238
GP +P A + P++++ P + T P T SSP+++
Sbjct: 18 GPTSPPSSCRNAAPSPPSSNSTPTSSTTPTVPPSLTTTSSPSSS 61
>03_05_1045 -
29914581-29914829,29914840-29916083,29919055-29919199,
29919727-29919792,29919882-29920108,29920204-29920310,
29920428-29920502,29920600-29920688,29920768-29920848,
29921631-29921702,29922056-29922178
Length = 825
Score = 28.7 bits (61), Expect = 2.6
Identities = 25/86 (29%), Positives = 35/86 (40%), Gaps = 5/86 (5%)
Frame = -1
Query: 406 LLIVWRAAASAGGSTCARDGDRTDSAGRTREL----NRADDG-HLSQYSGGAGHGELASH 242
L VW A GG AR R GR + NR DD + + G G ++ ++
Sbjct: 716 LASVWGCGAGGGGRRRARQARRRPRRGRLSNIYLDANRKDDARRVRKLIGSRGIRKVPAY 775
Query: 241 GHVTDAGAAVPSTAAVPDRAVPRSTE 164
V G V S+ D+A P+ E
Sbjct: 776 SEVEVDG--VVSSFVADDQAHPQRVE 799
>02_03_0160 - 15826050-15826462,15826870-15827140,15827242-15827253
Length = 231
Score = 28.7 bits (61), Expect = 2.6
Identities = 13/51 (25%), Positives = 24/51 (47%)
Frame = -2
Query: 396 YGEPPHPQVGPHAPEMETEPTAQAGPANSTAPMTGTCPNTAAEPATGSSPA 244
+ + P P V P P ++ +P+ A PA+ + P A+P+ + A
Sbjct: 151 HADGPDPAVDPSDPAVDADPSDPADPADDADDSDPSDPAVDADPSDPADDA 201
>12_01_0239 -
1793612-1793716,1793808-1793826,1794424-1794599,
1794701-1794747,1795760-1796291
Length = 292
Score = 28.3 bits (60), Expect = 3.4
Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 3/49 (6%)
Frame = -2
Query: 396 YGEPPHP---QVGPHAPEMETEPTAQAGPANSTAPMTGTCPNTAAEPAT 259
YG PP P P AP +P + ++S+AP G A P+T
Sbjct: 20 YGAPPPPYGSSPAPSAPPYGAKPPKEGKTSSSSAPYYGGGGGYGAPPST 68
>10_07_0029 + 12031711-12032464,12044289-12044386
Length = 283
Score = 28.3 bits (60), Expect = 3.4
Identities = 15/44 (34%), Positives = 19/44 (43%)
Frame = +2
Query: 257 PVAGSAAVLGQVPVIGAVEFAGPACAVGSVSISGACGPTCGCGG 388
P A + A P + A + PA A+ S A GP G GG
Sbjct: 209 PPAAAPAAPPVPPAVPAAQAPAPASALSFAPASAARGPASGTGG 252
>05_01_0364 + 2855760-2855801,2855940-2856015,2856759-2857747
Length = 368
Score = 28.3 bits (60), Expect = 3.4
Identities = 21/76 (27%), Positives = 30/76 (39%)
Frame = -1
Query: 385 AASAGGSTCARDGDRTDSAGRTRELNRADDGHLSQYSGGAGHGELASHGHVTDAGAAVPS 206
AA GG + + D G E + D+G+ GG+ +A G AGA P
Sbjct: 132 AAGGGGGGGSVPPENDDHGGSCDEASD-DEGNKQGGGGGSPKTMVAGDGQGGGAGAVAPP 190
Query: 205 TAAVPDRAVPRSTEGS 158
A P P + G+
Sbjct: 191 FAMTPHGKQPVAPPGN 206
>05_01_0004 -
34967-35149,35340-35501,36078-36225,36309-36385,
36507-36577,36850-37263,37518-38268
Length = 601
Score = 28.3 bits (60), Expect = 3.4
Identities = 16/51 (31%), Positives = 22/51 (43%), Gaps = 1/51 (1%)
Frame = -2
Query: 387 PPHPQVGPHAPEMETEPTAQAGPANSTAPMTGTCP-NTAAEPATGSSPATA 238
PP P+ P P+ ++ P +T T P AA P T SP +A
Sbjct: 83 PPPPRNSPSPPKPPSQAAQSPLPPTTTTTTPPTAPVPAAAPPPTAPSPYSA 133
>04_01_0083 +
904473-905167,905247-905347,905902-905994,907322-907968
Length = 511
Score = 28.3 bits (60), Expect = 3.4
Identities = 17/47 (36%), Positives = 23/47 (48%)
Frame = -1
Query: 400 IVWRAAASAGGSTCARDGDRTDSAGRTRELNRADDGHLSQYSGGAGH 260
+V A++++ ST A DR D+ TR RA S GG GH
Sbjct: 164 VVDAASSASAASTAAASLDR-DTTPLTRSSRRAHRAATSSSGGGGGH 209
>03_06_0519 - 34481751-34482722
Length = 323
Score = 28.3 bits (60), Expect = 3.4
Identities = 18/52 (34%), Positives = 20/52 (38%)
Frame = -2
Query: 393 GEPPHPQVGPHAPEMETEPTAQAGPANSTAPMTGTCPNTAAEPATGSSPATA 238
G PP P AP + PT A +N A P A T SP TA
Sbjct: 104 GAPPDPPAAVAAPPTSSSPTT-AMRSNRLAGAPSDPPAAATAGPTSPSPTTA 154
>02_03_0237 -
16723400-16723594,16723658-16723712,16724016-16724126,
16724545-16724809,16725155-16725716
Length = 395
Score = 28.3 bits (60), Expect = 3.4
Identities = 15/30 (50%), Positives = 17/30 (56%)
Frame = -2
Query: 324 GPANSTAPMTGTCPNTAAEPATGSSPATAT 235
G ST P T + PNTAA PA S P + T
Sbjct: 146 GQCTSTTP-TPSVPNTAAPPAPPSPPISPT 174
>02_02_0363 +
9446055-9446524,9446658-9446771,9446856-9447281,
9447812-9447893,9447964-9448020,9448633-9448881,
9448978-9449109,9449163-9449291
Length = 552
Score = 28.3 bits (60), Expect = 3.4
Identities = 17/48 (35%), Positives = 21/48 (43%), Gaps = 1/48 (2%)
Frame = -2
Query: 387 PPHPQVGPHAPEMETEPTAQAG-PANSTAPMTGTCPNTAAEPATGSSP 247
PP P P PE + T Q PA +TAP + P A + G P
Sbjct: 106 PPPPPTQPQ-PEQQKPVTVQENLPAPTTAPARASQPAAARQVPAGGVP 152
>11_06_0377 - 22900042-22900452,22900527-22902236
Length = 706
Score = 27.9 bits (59), Expect = 4.5
Identities = 15/36 (41%), Positives = 17/36 (47%)
Frame = -3
Query: 176 QVHRGVRHMDLKEVHRDPHDPGTGCTHFGLDKFESR 69
+VHRG +E HR HD G G LD E R
Sbjct: 348 EVHRGAN--GYREGHRSAHDDGEGPPFAALDDGEER 381
>11_01_0242 -
1862106-1862210,1862302-1862320,1863082-1863257,
1863359-1863405,1864443-1865022
Length = 308
Score = 27.9 bits (59), Expect = 4.5
Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 3/49 (6%)
Frame = -2
Query: 396 YGEPPHP---QVGPHAPEMETEPTAQAGPANSTAPMTGTCPNTAAEPAT 259
YG PP P P AP +P + ++S+AP G A P+T
Sbjct: 20 YGAPPPPYGSSPAPSAPPYGEKPPKEGKTSSSSAPYYGGGGGYGAPPST 68
>07_01_0729 - 5560405-5561235
Length = 276
Score = 27.9 bits (59), Expect = 4.5
Identities = 14/44 (31%), Positives = 20/44 (45%)
Frame = -1
Query: 298 DGHLSQYSGGAGHGELASHGHVTDAGAAVPSTAAVPDRAVPRST 167
D ++ GG G +L + D A P+ AA D PR+T
Sbjct: 167 DADVADDGGGGGFDDLVAEAD--DEAATTPAAAAADDARAPRTT 208
>06_03_0854 + 25400855-25403741,25406174-25407708
Length = 1473
Score = 27.9 bits (59), Expect = 4.5
Identities = 22/56 (39%), Positives = 25/56 (44%), Gaps = 5/56 (8%)
Frame = -2
Query: 384 PHPQVGPHAPEMETEPTAQAGPANST-AP---MTGTCPNTAAEPATGSSPAT-ATL 232
P P HAP EP A P +S AP + P+ AA A PAT ATL
Sbjct: 1020 PVPTPAVHAPAPPVEPNAVISPPSSALAPAYAVPAPAPSLAALEALAPPPATPATL 1075
>06_03_0778 - 24523780-24526353
Length = 857
Score = 27.9 bits (59), Expect = 4.5
Identities = 13/49 (26%), Positives = 20/49 (40%)
Frame = +2
Query: 236 VAVAGELPVAGSAAVLGQVPVIGAVEFAGPACAVGSVSISGACGPTCGC 382
V V P + ++ A F G C++G+ + G CGP C
Sbjct: 279 VYVRRRSPTSSTSTTTANASWAVAGMFPGDGCSMGTRGLDGFCGPNSYC 327
>06_01_1050 + 8262033-8262165,8262262-8262391,8262486-8263026
Length = 267
Score = 27.9 bits (59), Expect = 4.5
Identities = 21/52 (40%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Frame = -2
Query: 387 PPHPQVGPHAPEMETEPTAQAGPANSTAPMTGTCPNTAAEPATGS---SPAT 241
PP PQ + E E EP+ P TAP P AAE AT + SPA+
Sbjct: 147 PPPPQEIEESEEEEQEPSPLIEPHEITAPP----PAAAAEAATSNCSVSPAS 194
>06_01_0039 -
386576-387098,387173-387468,387744-388067,388165-388276,
388355-388482,388914-389048,389122-389250,389620-389787,
389897-390019,390099-390227,390543-390866,390946-392901
Length = 1448
Score = 27.5 bits (58), Expect = 5.9
Identities = 18/52 (34%), Positives = 19/52 (36%), Gaps = 2/52 (3%)
Frame = -2
Query: 387 PPHPQVGPHAPEMETEPTAQAGP-ANSTAPMTGTCPN-TAAEPATGSSPATA 238
PP P P P EP A P AP PN AA P + TA
Sbjct: 51 PPQPHTAPPPPPPNAEPEAPPPPQLEVKAPAATLPPNPEAASPGSAKDVHTA 102
>05_07_0200 -
28368890-28369021,28369169-28369303,28369918-28369947,
28370019-28370093,28370222-28370333,28370440-28370621,
28370723-28370854,28372193-28373479
Length = 694
Score = 27.5 bits (58), Expect = 5.9
Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
Frame = -2
Query: 387 PPHPQVGPHAPEMETEPTAQAGPANSTAPMTGTCPNTA--AEPATGSSPATAT 235
PP P+ +P T + AGP P T+ + PAT SS A A+
Sbjct: 317 PPMPRSRSASPSPSTSSSGSAGPPAPPPPPPPAAKRTSRTSTPATTSSSAPAS 369
>04_04_1125 + 31085106-31085714
Length = 202
Score = 27.5 bits (58), Expect = 5.9
Identities = 12/34 (35%), Positives = 14/34 (41%)
Frame = -2
Query: 384 PHPQVGPHAPEMETEPTAQAGPANSTAPMTGTCP 283
P P P P PT PA + + TG CP
Sbjct: 80 PTPATPPPTPATPATPTTPPTPAPAPSTPTGKCP 113
Score = 27.1 bits (57), Expect = 7.8
Identities = 19/50 (38%), Positives = 21/50 (42%)
Frame = -2
Query: 387 PPHPQVGPHAPEMETEPTAQAGPANSTAPMTGTCPNTAAEPATGSSPATA 238
PP P P A PT P +T P T P T A P T +PA A
Sbjct: 59 PPTPWTPPPATPTPPTPTPWT-PTPATPPPT---PATPATPTTPPTPAPA 104
>03_05_0953 + 29111030-29111105,29112250-29113520
Length = 448
Score = 27.5 bits (58), Expect = 5.9
Identities = 16/47 (34%), Positives = 20/47 (42%)
Frame = -2
Query: 378 PQVGPHAPEMETEPTAQAGPANSTAPMTGTCPNTAAEPATGSSPATA 238
P P ++ A AGP+ AP T T A A SSP+ A
Sbjct: 380 PGQQPQVTPLQPGSAAAAGPSALCAPGTATTTARGAAAAACSSPSAA 426
>03_05_0217 - 22056301-22056648
Length = 115
Score = 27.5 bits (58), Expect = 5.9
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +2
Query: 272 AAVLGQVPVIGAVEFAGPACAVGSVSISGA 361
A +G PVIGA +A CAV + + A
Sbjct: 2 AGRIGDTPVIGAGTYANALCAVSATGVGEA 31
>02_03_0361 - 18125504-18126250,18126381-18126543,18126713-18126942
Length = 379
Score = 27.5 bits (58), Expect = 5.9
Identities = 21/66 (31%), Positives = 24/66 (36%), Gaps = 2/66 (3%)
Frame = -1
Query: 382 ASAGGSTCARDGDRTDSAGRTRELNRADDGHLSQYSGGAGHGEL-ASHGH-VTDAGAAVP 209
A G CA D R + RAD S GG G G A H V A V
Sbjct: 3 AKRGAGACALSWDEEGEVSRGEKRRRADGDGSSDVGGGGGIGAFDALHDELVVSILADVA 62
Query: 208 STAAVP 191
++A P
Sbjct: 63 ASAGSP 68
>02_02_0628 +
12365109-12365150,12366315-12366411,12366489-12366554,
12367884-12367963,12368051-12368125,12368232-12368381,
12369816-12369881,12370141-12370206,12370653-12370763,
12370917-12371003,12371087-12371193,12372141-12372255,
12372472-12372537,12373521-12373615,12373700-12373880
Length = 467
Score = 27.5 bits (58), Expect = 5.9
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = -1
Query: 391 RAAASAGGSTCARDGDRTDSAGRTRELNRADDGHLSQYSGGAGHG 257
R+ + G+T A R + A R + +NRA +G LS+ G+G G
Sbjct: 411 RSQPATNGNTPASKKGRGEGAARNQLVNRAFEG-LSRGGRGSGRG 454
>01_01_1037 + 8192541-8193179
Length = 212
Score = 27.5 bits (58), Expect = 5.9
Identities = 13/52 (25%), Positives = 20/52 (38%)
Frame = -1
Query: 367 STCARDGDRTDSAGRTRELNRADDGHLSQYSGGAGHGELASHGHVTDAGAAV 212
+ C DGD + ++R +G Y GG + GH D A +
Sbjct: 157 AVCGGDGDDVEEELAALRVDRLAEGVWDSYFGGWSRWNYVTDGHYYDEDATI 208
>12_02_0813 - 23386062-23386158,23386326-23386409,23386688-23386743
Length = 78
Score = 27.1 bits (57), Expect = 7.8
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = +2
Query: 269 SAAVLGQVPVIGAVEFAGPACAVGSVSISGACGPTCGC 382
+ VLG P G E G A G + +CG +C C
Sbjct: 36 TTTVLGVAPEKGQFEGVGKAAESGEGAHGCSCGSSCKC 73
>10_01_0267 -
2828966-2829340,2831164-2831629,2833390-2833487,
2833782-2834078,2834287-2834694
Length = 547
Score = 27.1 bits (57), Expect = 7.8
Identities = 16/55 (29%), Positives = 20/55 (36%)
Frame = -2
Query: 396 YGEPPHPQVGPHAPEMETEPTAQAGPANSTAPMTGTCPNTAAEPATGSSPATATL 232
Y PPHP +P P PA+ P T A P +PA A +
Sbjct: 480 YQCPPHPAAAALSPPGAIAPA----PASMLPPFNSTAAGIFAAPVPSPAPAPAPM 530
>07_03_1523 +
27432991-27433199,27433585-27434185,27434468-27434642,
27434686-27436418,27436871-27437317
Length = 1054
Score = 27.1 bits (57), Expect = 7.8
Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Frame = -2
Query: 384 PHPQVGPHAPEMETEPTAQAGPANSTAPMTGTCPNTAAEP-ATGSSPATATL 232
P+P PH E + A P+T + TAA P +T + PAT L
Sbjct: 72 PNPTETPHKEGEELKKGEGADRQRGRRPITASSLCTAASPMSTDTGPATPNL 123
>03_05_0851 + 28225608-28226570
Length = 320
Score = 27.1 bits (57), Expect = 7.8
Identities = 22/59 (37%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Frame = -1
Query: 367 STCARDGDRTDSA-GRTRE-LNRADDGHLSQYSGGAGHGELASHGHVTDAGAAVPSTAA 197
S C DG + S G+ ++ N AD G GGAG + A+HGH A P AA
Sbjct: 112 SVCEEDGSSSLSVDGKQQQHSNPADRG------GGAGDHKGAAHGHSDGKKPAKPRRAA 164
>03_04_0023 +
16537257-16537272,16537515-16537929,16538404-16538466,
16538604-16538607
Length = 165
Score = 27.1 bits (57), Expect = 7.8
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = -1
Query: 295 GHLSQYSGGAGHGELASHGHVTDAGA 218
GH + G GHG++ H H GA
Sbjct: 31 GHAQEQPPGHGHGQVQRHEHPAHGGA 56
>02_02_0079 - 6594365-6594757
Length = 130
Score = 27.1 bits (57), Expect = 7.8
Identities = 15/39 (38%), Positives = 16/39 (41%)
Frame = -1
Query: 409 RLLIVWRAAASAGGSTCARDGDRTDSAGRTRELNRADDG 293
R L W A AGG+ D D D R R DDG
Sbjct: 53 RRLTTW-AYDKAGGNEMTSDEDANDEGARARNKAGGDDG 90
>01_07_0291 +
42555233-42555444,42556515-42556550,42556652-42556796,
42556885-42556938,42557130-42557260,42557830-42558056,
42558670-42558846,42558928-42559076
Length = 376
Score = 27.1 bits (57), Expect = 7.8
Identities = 13/47 (27%), Positives = 19/47 (40%)
Frame = -2
Query: 384 PHPQVGPHAPEMETEPTAQAGPANSTAPMTGTCPNTAAEPATGSSPA 244
P P H P + P + A P +++ T P A A SP+
Sbjct: 23 PSPPASSHVP-LPRSPASSARPRRASSVSLSTAPRPRARAAGSDSPS 68
>01_04_0054 - 15456668-15459691
Length = 1007
Score = 27.1 bits (57), Expect = 7.8
Identities = 13/45 (28%), Positives = 19/45 (42%)
Frame = -2
Query: 390 EPPHPQVGPHAPEMETEPTAQAGPANSTAPMTGTCPNTAAEPATG 256
+P H P+ T+P P ++T PM T N A+ G
Sbjct: 169 QPTHNTQQSAQPKQSTQPMQATQPKHATEPMEKTDANRASNAKEG 213
>01_02_0089 -
10997882-10997957,10998139-10998423,10998519-10998589,
10998685-10998761,10998858-10998963,10999062-10999189,
10999291-10999423,11000005-11000133,11000220-11000375,
11000770-11000846,11000938-11000998,11001249-11001383,
11001642-11001765,11001852-11001917,11002010-11002112,
11002603-11002652,11003795-11003895
Length = 625
Score = 27.1 bits (57), Expect = 7.8
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = -1
Query: 295 GHLSQYSGGAGHGELASHGHVTDAGAAVPSTAAVPDRAVPRSTE 164
GH SGG A + + DAGA VP++ + A+ + E
Sbjct: 289 GHAGAKSGGELESAQAKNQALKDAGAVVPTSYEALETAIKETFE 332
>01_01_1096 -
8659091-8659459,8660730-8661050,8661416-8661694,
8661781-8661897,8662142-8662210,8663204-8663397,
8663552-8663633
Length = 476
Score = 27.1 bits (57), Expect = 7.8
Identities = 17/60 (28%), Positives = 23/60 (38%), Gaps = 1/60 (1%)
Frame = -1
Query: 397 VWRAAASAGGSTCARDGDRT-DSAGRTRELNRADDGHLSQYSGGAGHGELASHGHVTDAG 221
+WR GG G D+AGR E +D +G G G+ + H D G
Sbjct: 30 MWRMGLGGGGGGGGGGGGGDGDAAGRLPERPGEEDCVYYLRTGACGFGDRCRYNHPRDRG 89
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,284,579
Number of Sequences: 37544
Number of extensions: 219536
Number of successful extensions: 1556
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 1413
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1541
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 979080328
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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