Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov11d14
(478 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81044-11|CAB02809.2| 476|Caenorhabditis elegans Hypothetical p... 30 0.99
Z77662-14|CAI79239.1| 245|Caenorhabditis elegans Hypothetical p... 30 0.99
AF068714-4|AAK68676.1| 251|Caenorhabditis elegans Initiation fa... 30 0.99
AF068714-3|AAM22022.1| 250|Caenorhabditis elegans Initiation fa... 30 0.99
AF068714-2|AAC17807.1| 248|Caenorhabditis elegans Initiation fa... 30 0.99
Z98866-26|CAM33505.1| 559|Caenorhabditis elegans Hypothetical p... 29 1.3
Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical pr... 29 1.3
Z80214-5|CAJ76929.1| 916|Caenorhabditis elegans Hypothetical pr... 29 1.7
Z80214-4|CAB02263.1| 982|Caenorhabditis elegans Hypothetical pr... 29 1.7
AF078784-1|AAK18967.1| 458|Caenorhabditis elegans Hypothetical ... 29 1.7
Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z77662-5|CAB01192.2| 579|Caenorhabditis elegans Hypothetical pr... 29 2.3
U89245-1|AAB49459.1| 612|Caenorhabditis elegans transcription f... 28 3.0
U50198-3|AAA91261.2| 503|Caenorhabditis elegans Hypothetical pr... 28 3.0
AF003148-5|AAB54209.3| 792|Caenorhabditis elegans Hypothetical ... 28 3.0
AF003141-10|AAK21487.1| 612|Caenorhabditis elegans Uncoordinate... 28 3.0
AF001272-1|AAB84235.1| 612|Caenorhabditis elegans enhancer of s... 28 3.0
AF001271-1|AAB84234.1| 612|Caenorhabditis elegans enhancer of s... 28 3.0
Z34801-3|CAA84327.1| 520|Caenorhabditis elegans Hypothetical pr... 28 4.0
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 28 4.0
U41994-9|AAK31523.1| 786|Caenorhabditis elegans Hypothetical pr... 27 5.3
U40959-6|AAA81770.1| 95|Caenorhabditis elegans Hypothetical pr... 27 5.3
AL132898-19|CAN99707.1| 258|Caenorhabditis elegans Hypothetical... 27 5.3
Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical pr... 27 7.0
Z70685-1|CAA94607.1| 522|Caenorhabditis elegans Hypothetical pr... 27 7.0
Z19122-1|CAA79529.1| 522|Caenorhabditis elegans hypothetical po... 27 7.0
U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical pr... 27 7.0
U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical pr... 27 7.0
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 27 7.0
U58748-8|AAM97986.1| 497|Caenorhabditis elegans Hypothetical pr... 27 7.0
U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical pr... 27 7.0
U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical pr... 27 7.0
U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical pr... 27 7.0
U28737-2|AAA68272.1| 455|Caenorhabditis elegans Patterned expre... 27 7.0
AL031635-4|CAA21043.2| 269|Caenorhabditis elegans Hypothetical ... 27 7.0
Z82083-3|CAB04971.1| 756|Caenorhabditis elegans Hypothetical pr... 27 9.2
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 27 9.2
Z78418-3|CAB01697.1| 932|Caenorhabditis elegans Hypothetical pr... 27 9.2
U58748-9|AAB52969.3| 542|Caenorhabditis elegans Hypothetical pr... 27 9.2
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p... 27 9.2
AF047652-5|AAC04391.2| 449|Caenorhabditis elegans Hypothetical ... 27 9.2
AC006630-3|AAK68325.1| 257|Caenorhabditis elegans Hypothetical ... 27 9.2
>Z81044-11|CAB02809.2| 476|Caenorhabditis elegans Hypothetical
protein C30H6.4 protein.
Length = 476
Score = 29.9 bits (64), Expect = 0.99
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = -2
Query: 345 TEPTAQAGPANSTAPMTGTCPNTAAEPATGSSPATAT 235
TEPT +T M T P+T + P T S+ T +
Sbjct: 299 TEPTTSTSTPTTTTTMQTTTPSTTSTPTTTSTTTTTS 335
>Z77662-14|CAI79239.1| 245|Caenorhabditis elegans Hypothetical
protein F47B8.13 protein.
Length = 245
Score = 29.9 bits (64), Expect = 0.99
Identities = 14/36 (38%), Positives = 16/36 (44%)
Frame = -2
Query: 369 GPHAPEMETEPTAQAGPANSTAPMTGTCPNTAAEPA 262
G AP EP + PA + AP P TA PA
Sbjct: 173 GGAAPAAPAEPAPEPAPAPAPAPEAALAPETAPAPA 208
>AF068714-4|AAK68676.1| 251|Caenorhabditis elegans Initiation
factor 4e (eif4e) familyprotein 3, isoform b protein.
Length = 251
Score = 29.9 bits (64), Expect = 0.99
Identities = 13/35 (37%), Positives = 15/35 (42%)
Frame = -2
Query: 339 PTAQAGPANSTAPMTGTCPNTAAEPATGSSPATAT 235
P P P T P+ ATG+SPAT T
Sbjct: 216 PAKDPAPVKEKGPAATTSPSNPGTEATGTSPATPT 250
>AF068714-3|AAM22022.1| 250|Caenorhabditis elegans Initiation
factor 4e (eif4e) familyprotein 3, isoform c protein.
Length = 250
Score = 29.9 bits (64), Expect = 0.99
Identities = 13/35 (37%), Positives = 15/35 (42%)
Frame = -2
Query: 339 PTAQAGPANSTAPMTGTCPNTAAEPATGSSPATAT 235
P P P T P+ ATG+SPAT T
Sbjct: 215 PAKDPAPVKEKGPAATTSPSNPGTEATGTSPATPT 249
>AF068714-2|AAC17807.1| 248|Caenorhabditis elegans Initiation
factor 4e (eif4e) familyprotein 3, isoform a protein.
Length = 248
Score = 29.9 bits (64), Expect = 0.99
Identities = 13/35 (37%), Positives = 15/35 (42%)
Frame = -2
Query: 339 PTAQAGPANSTAPMTGTCPNTAAEPATGSSPATAT 235
P P P T P+ ATG+SPAT T
Sbjct: 213 PAKDPAPVKEKGPAATTSPSNPGTEATGTSPATPT 247
>Z98866-26|CAM33505.1| 559|Caenorhabditis elegans Hypothetical
protein Y49E10.29 protein.
Length = 559
Score = 29.5 bits (63), Expect = 1.3
Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 4/51 (7%)
Frame = -2
Query: 387 PPHPQVGPHAPEMETEPTAQ----AGPANSTAPMTGTCPNTAAEPATGSSP 247
PP P P P + +P Q A P + +AP+ PNT + A+ P
Sbjct: 414 PPKPTPSPAPPAQKAQPVTQQQASAPPTSPSAPVQA--PNTPTQKASSQDP 462
>Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical
protein F02D10.1 protein.
Length = 316
Score = 29.5 bits (63), Expect = 1.3
Identities = 15/52 (28%), Positives = 21/52 (40%)
Frame = -2
Query: 393 GEPPHPQVGPHAPEMETEPTAQAGPANSTAPMTGTCPNTAAEPATGSSPATA 238
GE GP P P Q+G ++ P P A +P + +P TA
Sbjct: 231 GEAGPGPAGPPGPAGPAGPDGQSGSGSAGGPGPKGPPGPAGQPGSDGNPGTA 282
>Z80214-5|CAJ76929.1| 916|Caenorhabditis elegans Hypothetical
protein C27D8.3b protein.
Length = 916
Score = 29.1 bits (62), Expect = 1.7
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = -2
Query: 387 PPHPQVGPHAPEMETEPTAQAGPANSTAPMTGTCPNTAAEPATGSSPATATL 232
P P+V P A + +PT+ N+TA GT NTA + + +S T+
Sbjct: 332 PREPKVFPSAALIAMKPTSGVKRNNATANQKGTGGNTAHKKSDVNSQEFVTI 383
>Z80214-4|CAB02263.1| 982|Caenorhabditis elegans Hypothetical
protein C27D8.3a protein.
Length = 982
Score = 29.1 bits (62), Expect = 1.7
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = -2
Query: 387 PPHPQVGPHAPEMETEPTAQAGPANSTAPMTGTCPNTAAEPATGSSPATATL 232
P P+V P A + +PT+ N+TA GT NTA + + +S T+
Sbjct: 398 PREPKVFPSAALIAMKPTSGVKRNNATANQKGTGGNTAHKKSDVNSQEFVTI 449
>AF078784-1|AAK18967.1| 458|Caenorhabditis elegans Hypothetical
protein H34I24.2 protein.
Length = 458
Score = 29.1 bits (62), Expect = 1.7
Identities = 16/33 (48%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Frame = -2
Query: 342 EPTAQAGPANSTAPMTGTCPNTA-AEPATGSSP 247
+PT A P STAP T PN A TGS P
Sbjct: 247 KPTTPAPPTTSTAPPPTTTPNPCLAFNCTGSGP 279
>Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical
protein C30H6.11 protein.
Length = 460
Score = 28.7 bits (61), Expect = 2.3
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = -2
Query: 345 TEPTAQAGPANSTAPMTGTCPNTAAEPATGSSPATAT 235
T PT PA +T+ T T P T + T + T T
Sbjct: 239 TTPTTTTTPATTTSETTTTTPTTTTQTTTKPTTTTTT 275
>Z77662-5|CAB01192.2| 579|Caenorhabditis elegans Hypothetical
protein F47B8.5 protein.
Length = 579
Score = 28.7 bits (61), Expect = 2.3
Identities = 17/41 (41%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Frame = -2
Query: 354 EMETEPTAQAGPANSTAPMTGTCPNTAA--EPATGSSPATA 238
E E P A A PA + AP P A EPA +PA A
Sbjct: 472 EGEAAPAAPAEPAPAPAPAPAPAPEAAPAPEPAPAPAPAPA 512
>U89245-1|AAB49459.1| 612|Caenorhabditis elegans transcription
factor UNC-37 protein.
Length = 612
Score = 28.3 bits (60), Expect = 3.0
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Frame = -1
Query: 388 AAASAGGSTCARDGDRTDSAGRTRELNRADDGHLSQYS--GGAGHGELASHGHVTDAGAA 215
A S+GG++ A+ D E++ +D H S S G A S V +GA+
Sbjct: 154 AGGSSGGASEAKKAKLEDPDDGELEIDVTNDDHPSTASNGGAANKNGRDSTNSVASSGAS 213
Query: 214 VPSTAA 197
PS A+
Sbjct: 214 TPSIAS 219
>U50198-3|AAA91261.2| 503|Caenorhabditis elegans Hypothetical
protein R04B3.3 protein.
Length = 503
Score = 28.3 bits (60), Expect = 3.0
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = -2
Query: 384 PHPQVGPHAPEMETEPTAQAGPANSTA 304
P P+VGP E + PTA AG A + A
Sbjct: 46 PFPRVGPFRAEPQRGPTAAAGGAAAVA 72
>AF003148-5|AAB54209.3| 792|Caenorhabditis elegans Hypothetical
protein F32B5.7 protein.
Length = 792
Score = 28.3 bits (60), Expect = 3.0
Identities = 13/24 (54%), Positives = 14/24 (58%), Gaps = 1/24 (4%)
Frame = +2
Query: 320 GPAC-AVGSVSISGACGPTCGCGG 388
G AC A G+ GACG GCGG
Sbjct: 761 GAACGACGACGACGACGGCGGCGG 784
>AF003141-10|AAK21487.1| 612|Caenorhabditis elegans Uncoordinated
protein 37 protein.
Length = 612
Score = 28.3 bits (60), Expect = 3.0
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Frame = -1
Query: 388 AAASAGGSTCARDGDRTDSAGRTRELNRADDGHLSQYS--GGAGHGELASHGHVTDAGAA 215
A S+GG++ A+ D E++ +D H S S G A S V +GA+
Sbjct: 154 AGGSSGGASEAKKAKLEDPDDGELEIDVTNDDHPSTASNGGAANKNGRDSTNSVASSGAS 213
Query: 214 VPSTAA 197
PS A+
Sbjct: 214 TPSIAS 219
>AF001272-1|AAB84235.1| 612|Caenorhabditis elegans enhancer of
split groucho protein.
Length = 612
Score = 28.3 bits (60), Expect = 3.0
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Frame = -1
Query: 388 AAASAGGSTCARDGDRTDSAGRTRELNRADDGHLSQYS--GGAGHGELASHGHVTDAGAA 215
A S+GG++ A+ D E++ +D H S S G A S V +GA+
Sbjct: 154 AGGSSGGASEAKKAKLEDPDDGELEIDVTNDDHPSTASNGGAANKNGRDSTNSVASSGAS 213
Query: 214 VPSTAA 197
PS A+
Sbjct: 214 TPSIAS 219
>AF001271-1|AAB84234.1| 612|Caenorhabditis elegans enhancer of
split groucho protein.
Length = 612
Score = 28.3 bits (60), Expect = 3.0
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Frame = -1
Query: 388 AAASAGGSTCARDGDRTDSAGRTRELNRADDGHLSQYS--GGAGHGELASHGHVTDAGAA 215
A S+GG++ A+ D E++ +D H S S G A S V +GA+
Sbjct: 154 AGGSSGGASEAKKAKLEDPDDGELEIDVTNDDHPSTASNGGAANKNGRDSTNSVASSGAS 213
Query: 214 VPSTAA 197
PS A+
Sbjct: 214 TPSIAS 219
>Z34801-3|CAA84327.1| 520|Caenorhabditis elegans Hypothetical
protein F59A2.2 protein.
Length = 520
Score = 27.9 bits (59), Expect = 4.0
Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Frame = -2
Query: 396 YGEPPHPQVGPHAPEMETEPTAQAGPANSTAPMTGTCPNTAAE-PATGSSPATATL 232
YGE QVG + M +P A+ + TG T AE PA S +++ +
Sbjct: 23 YGEQLAAQVGQYRQAMNEQPAGSDASASISKRFTGESGETKAENPANTSIESSSAI 78
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 27.9 bits (59), Expect = 4.0
Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
Frame = -2
Query: 390 EPPHPQVGPHAPEMETEPTAQAG--PANSTAPMTGTCPNTAAEPATGSSPATA 238
+PP P + + EP + AG A S AP G P+ + +T S + A
Sbjct: 615 QPPTPASASASTTLHVEPASVAGGSQAGSRAPSAGPGPSATPDSSTIPSASAA 667
>U41994-9|AAK31523.1| 786|Caenorhabditis elegans Hypothetical
protein F59A6.3 protein.
Length = 786
Score = 27.5 bits (58), Expect = 5.3
Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 4/45 (8%)
Frame = -2
Query: 357 PEMETEPTAQAGPANSTAP----MTGTCPNTAAEPATGSSPATAT 235
P + P+ +G ST P +G+ +T + P+T S P+TA+
Sbjct: 523 PSTTSGPSTTSGSTVSTTPGASTTSGSTQSTTSGPSTSSGPSTAS 567
>U40959-6|AAA81770.1| 95|Caenorhabditis elegans Hypothetical
protein B0310.6 protein.
Length = 95
Score = 27.5 bits (58), Expect = 5.3
Identities = 21/56 (37%), Positives = 27/56 (48%), Gaps = 6/56 (10%)
Frame = +2
Query: 236 VAVAGE-LPVAGSAAVLGQVPV-IGAVEFAGPACAVGSVSISGA----CGPTCGCG 385
+AV GE LP A+ GQ V I A + G C G +++ CG CGCG
Sbjct: 39 LAVNGEELPT--DIALEGQSEVMIRAKRYYGCGCGCGCATVAAVSPVPCGGCCGCG 92
>AL132898-19|CAN99707.1| 258|Caenorhabditis elegans Hypothetical
protein Y59A8B.26 protein.
Length = 258
Score = 27.5 bits (58), Expect = 5.3
Identities = 23/69 (33%), Positives = 28/69 (40%), Gaps = 6/69 (8%)
Frame = -1
Query: 379 SAGGSTCARDGDRTDSAGRTRELNRADDG--HLSQYSGGAGHGELASHGHVT----DAGA 218
+ GG+T A G G T L A G LS GGA G G +T
Sbjct: 184 ATGGATGALGGLTGTVGGLTNALGGATGGLGGLSGILGGAAGGATGGLGGITGNVGQVAG 243
Query: 217 AVPSTAAVP 191
A+P+ AVP
Sbjct: 244 AIPNVPAVP 252
>Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical
protein T10B10.1 protein.
Length = 428
Score = 27.1 bits (57), Expect = 7.0
Identities = 20/50 (40%), Positives = 21/50 (42%), Gaps = 2/50 (4%)
Frame = -2
Query: 384 PHPQ-VGPHAPEMETEPTAQAGPANSTA-PMTGTCPNTAAEPATGSSPAT 241
P PQ P Q P STA P T P T A PAT + PAT
Sbjct: 275 PCPQRQDDRTPPSSGTSAPQPPPRGSTAAPGTRAPPATRAPPATRAPPAT 324
>Z70685-1|CAA94607.1| 522|Caenorhabditis elegans Hypothetical
protein R07D5.1 protein.
Length = 522
Score = 27.1 bits (57), Expect = 7.0
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = -1
Query: 286 SQYSGGAGHGELASHGHVTDAGAAV 212
S + G AGHG HGH + G A+
Sbjct: 97 SHHVGSAGHGAGQGHGHKKEFGPAM 121
>Z19122-1|CAA79529.1| 522|Caenorhabditis elegans hypothetical
polypeptide protein.
Length = 522
Score = 27.1 bits (57), Expect = 7.0
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = -1
Query: 286 SQYSGGAGHGELASHGHVTDAGAAV 212
S + G AGHG HGH + G A+
Sbjct: 97 SHHVGSAGHGAGQGHGHKKEFGPAM 121
>U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical
protein K06A9.1c protein.
Length = 825
Score = 27.1 bits (57), Expect = 7.0
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = -2
Query: 345 TEPTAQAGPANSTAPMTGTCPNTAAEPATGSSPAT 241
T T P +ST+P + PN ++ PA+ S T
Sbjct: 308 TGSTVTVVPGSSTSPAPSSSPNPSSSPASTGSTIT 342
>U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical
protein K06A9.1a protein.
Length = 1032
Score = 27.1 bits (57), Expect = 7.0
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = -2
Query: 345 TEPTAQAGPANSTAPMTGTCPNTAAEPATGSSPAT 241
T T P +ST+P + PN ++ PA+ S T
Sbjct: 515 TGSTVTVVPGSSTSPAPSSSPNPSSSPASTGSTIT 549
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical
protein K06A9.1b protein.
Length = 2232
Score = 27.1 bits (57), Expect = 7.0
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = -2
Query: 345 TEPTAQAGPANSTAPMTGTCPNTAAEPATGSSPAT 241
T T P +ST+P + PN ++ PA+ S T
Sbjct: 515 TGSTVTVVPGSSTSPAPSSSPNPSSSPASTGSTIT 549
>U58748-8|AAM97986.1| 497|Caenorhabditis elegans Hypothetical
protein ZK180.5b protein.
Length = 497
Score = 27.1 bits (57), Expect = 7.0
Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 5/57 (8%)
Frame = -2
Query: 390 EP-PHPQVGPHAPEMETEPTAQAGPANSTAPMTGT---CPNTAAEPA-TGSSPATAT 235
EP P PQV P APE E +A P + P+ P ++P ++PA T
Sbjct: 398 EPAPQPQVIPQAPETFVETSAPVAPQVTEYPIPAAQTEAPEEESKPGYEQTAPAVET 454
>U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical
protein C12D12.1a protein.
Length = 769
Score = 27.1 bits (57), Expect = 7.0
Identities = 15/51 (29%), Positives = 21/51 (41%)
Frame = -2
Query: 387 PPHPQVGPHAPEMETEPTAQAGPANSTAPMTGTCPNTAAEPATGSSPATAT 235
P +P AP PT+ A + P+T T P T T ++ T T
Sbjct: 653 PVNPTSSTTAPTAPVNPTSPT-TAPTVPPVTTTTPTTTTSTTTTTTTTTTT 702
>U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical
protein C12D12.1c protein.
Length = 825
Score = 27.1 bits (57), Expect = 7.0
Identities = 15/51 (29%), Positives = 21/51 (41%)
Frame = -2
Query: 387 PPHPQVGPHAPEMETEPTAQAGPANSTAPMTGTCPNTAAEPATGSSPATAT 235
P +P AP PT+ A + P+T T P T T ++ T T
Sbjct: 709 PVNPTSSTTAPTAPVNPTSPT-TAPTVPPVTTTTPTTTTSTTTTTTTTTTT 758
>U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical
protein C12D12.1b protein.
Length = 648
Score = 27.1 bits (57), Expect = 7.0
Identities = 15/51 (29%), Positives = 21/51 (41%)
Frame = -2
Query: 387 PPHPQVGPHAPEMETEPTAQAGPANSTAPMTGTCPNTAAEPATGSSPATAT 235
P +P AP PT+ A + P+T T P T T ++ T T
Sbjct: 532 PVNPTSSTTAPTAPVNPTSPT-TAPTVPPVTTTTPTTTTSTTTTTTTTTTT 581
>U28737-2|AAA68272.1| 455|Caenorhabditis elegans Patterned
expression site protein23 protein.
Length = 455
Score = 27.1 bits (57), Expect = 7.0
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +1
Query: 94 KCVQPVPGSCGSRWTSFRSIWRTPRW 171
KCV +PG S+ +FR IW+ ++
Sbjct: 244 KCVIALPGGIRSKPLTFRQIWKKEKY 269
>AL031635-4|CAA21043.2| 269|Caenorhabditis elegans Hypothetical
protein Y47D3B.6 protein.
Length = 269
Score = 27.1 bits (57), Expect = 7.0
Identities = 16/43 (37%), Positives = 20/43 (46%)
Frame = +2
Query: 236 VAVAGELPVAGSAAVLGQVPVIGAVEFAGPACAVGSVSISGAC 364
+ VA +PVA A PV A PAC G+V +G C
Sbjct: 211 IPVAPVIPVALGAPCAA--PVAPVYASAAPACVPGAVCSAGVC 251
>Z82083-3|CAB04971.1| 756|Caenorhabditis elegans Hypothetical
protein ZK1010.5 protein.
Length = 756
Score = 26.6 bits (56), Expect = 9.2
Identities = 15/43 (34%), Positives = 19/43 (44%), Gaps = 2/43 (4%)
Frame = -2
Query: 387 PPHPQVGPHAPEMETEP--TAQAGPANSTAPMTGTCPNTAAEP 265
PP+P VG P EP T A + P+ P T+ EP
Sbjct: 308 PPNPPVGISGPATSEEPNNTTAAPTVPTDLPVVFVDPATSQEP 350
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 26.6 bits (56), Expect = 9.2
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +2
Query: 323 PACAVGSVSISGACGPTCGCGG 388
PAC G G CG CG GG
Sbjct: 116 PACGGGCGGGGGGCGGGCGGGG 137
>Z78418-3|CAB01697.1| 932|Caenorhabditis elegans Hypothetical
protein F25D7.4 protein.
Length = 932
Score = 26.6 bits (56), Expect = 9.2
Identities = 20/56 (35%), Positives = 24/56 (42%), Gaps = 7/56 (12%)
Frame = -2
Query: 384 PHPQVGPHAPEMETEPTAQ---AGPANSTAP----MTGTCPNTAAEPATGSSPATA 238
P P G A + EP AQ AG AP + P A +T S+PATA
Sbjct: 378 PAPPRGAPAKAPKAEPIAQKKVAGKVQRAAPSKPASAVSAPKATAPASTSSAPATA 433
>U58748-9|AAB52969.3| 542|Caenorhabditis elegans Hypothetical
protein ZK180.5a protein.
Length = 542
Score = 26.6 bits (56), Expect = 9.2
Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = -2
Query: 390 EP-PHPQVGPHAPEMETEPTAQAGPANSTAPM 298
EP P PQV P APE E +A P + P+
Sbjct: 398 EPAPQPQVIPQAPETFVETSAPVAPQVTEYPI 429
>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
protein T19D12.1 protein.
Length = 1844
Score = 26.6 bits (56), Expect = 9.2
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = -2
Query: 345 TEPTAQAGPANSTAPMTGTCPNTAAEPATGSS 250
T Q ++ST P TG+ +T P+T SS
Sbjct: 1536 TVGATQTSVSSSTVPNTGSTGSTVTNPSTSSS 1567
>AF047652-5|AAC04391.2| 449|Caenorhabditis elegans Hypothetical
protein C34H4.2 protein.
Length = 449
Score = 26.6 bits (56), Expect = 9.2
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 3/40 (7%)
Frame = -2
Query: 345 TEPTAQAGPANSTAPMTGTCPNTAAEPATG---SSPATAT 235
T +A P +S+A TGT ++ + PA+G S PA A+
Sbjct: 375 TPSSAPPAPGSSSASPTGTSGSSVSPPASGPTTSMPAQAS 414
>AC006630-3|AAK68325.1| 257|Caenorhabditis elegans Hypothetical
protein F14H12.3 protein.
Length = 257
Score = 26.6 bits (56), Expect = 9.2
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = +2
Query: 317 AGPACAVGSVSISGACGPTCGCGGS 391
A P C + S AC TCG GGS
Sbjct: 136 AQPCCTWTAWSSWSACSVTCGSGGS 160
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,688,879
Number of Sequences: 27780
Number of extensions: 149374
Number of successful extensions: 903
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 751
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 889
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 871571276
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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