BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bmov11d13 (640 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_54211| Best HMM Match : No HMM Matches (HMM E-Value=.) 131 4e-31 SB_49877| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.005 SB_11741| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.085 SB_51866| Best HMM Match : Pkinase (HMM E-Value=0) 31 0.60 SB_642| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.79 SB_26127| Best HMM Match : Pkinase (HMM E-Value=5.3e-10) 31 1.0 SB_6748| Best HMM Match : Pkinase (HMM E-Value=1.7e-05) 30 1.8 SB_29061| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8 SB_58065| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2 SB_26833| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2 SB_37572| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2 SB_23835| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2 SB_43399| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2 SB_207| Best HMM Match : RVT_1 (HMM E-Value=7.4e-06) 29 4.2 SB_34527| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.6 SB_28982| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.6 SB_55525| Best HMM Match : WD40 (HMM E-Value=1.1) 28 7.4 SB_58716| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.4 SB_37006| Best HMM Match : 7tm_1 (HMM E-Value=1.4e-22) 27 9.7 SB_32763| Best HMM Match : Histone_HNS (HMM E-Value=0.15) 27 9.7 >SB_54211| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 796 Score = 131 bits (317), Expect = 4e-31 Identities = 64/127 (50%), Positives = 87/127 (68%) Frame = +1 Query: 259 QEASIFVFEKKQLDRWQKADRDIMLETLKRGIIQLTKLRHPQILTVQHSLEESRESLAFA 438 QEAS+ VFEK+ LD K DRD++LE +K+G +QLT+LRHP++L +QH++EESR+ LAFA Sbjct: 3 QEASLVVFEKRLLDTVDKRDRDVVLELMKKGAVQLTRLRHPRLLLIQHAMEESRDCLAFA 62 Query: 439 TEPVFASLANILGYTENMPQPIPGHLTNYKLFELEIKYGLMQIAEGLAFLHTDVKLLHRN 618 TEP+FASL+N+LG +NMP P P + EGL FLH D K+L N Sbjct: 63 TEPIFASLSNVLGRHDNMPSPPPPEFA---------------LVEGLMFLHNDAKILQGN 107 Query: 619 VCPESII 639 + PE+I+ Sbjct: 108 LSPENIV 114 >SB_49877| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 607 Score = 38.3 bits (85), Expect = 0.005 Identities = 26/109 (23%), Positives = 53/109 (48%), Gaps = 1/109 (0%) Frame = +1 Query: 316 DRDIMLETLKRGIIQLTKLRHPQILTVQHSLEESRESLAFATEPVFASLANILGYTENMP 495 +R +L +R L L HP ++ + + E + TE L++ + +++ P Sbjct: 46 ERGALLAKFRRECELLEALNHPNVVRLITVIYEGNKPPILITELCDCDLSSFIKDSKSKP 105 Query: 496 QPIPGHLTNYKLFELEIKYGLMQIAEGLAFLHTDVK-LLHRNVCPESII 639 KL E+ ++ +A GL +LHT ++ +HR++CP++I+ Sbjct: 106 ----------KLLLEEVVTIMLDVANGLNYLHTRIQPTIHRDLCPKNIL 144 >SB_11741| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 49 Score = 34.3 bits (75), Expect = 0.085 Identities = 13/25 (52%), Positives = 18/25 (72%) Frame = +1 Query: 565 IAEGLAFLHTDVKLLHRNVCPESII 639 + EGL FLH D K+L N+ PE+I+ Sbjct: 1 LVEGLMFLHNDAKILQGNLSPENIV 25 >SB_51866| Best HMM Match : Pkinase (HMM E-Value=0) Length = 948 Score = 31.5 bits (68), Expect = 0.60 Identities = 14/41 (34%), Positives = 26/41 (63%) Frame = +1 Query: 517 TNYKLFELEIKYGLMQIAEGLAFLHTDVKLLHRNVCPESII 639 T+ L ++Y L QI GL ++H+ K+LHR++ P +++ Sbjct: 118 TDQPLTTEHVRYFLYQILRGLKYIHS-AKVLHRDLKPSNLL 157 >SB_642| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 2229 Score = 31.1 bits (67), Expect = 0.79 Identities = 19/53 (35%), Positives = 34/53 (64%) Frame = +1 Query: 481 TENMPQPIPGHLTNYKLFELEIKYGLMQIAEGLAFLHTDVKLLHRNVCPESII 639 +E++ PIP H ++ I Y QIA+ LA+LHT + +++R++ PE+I+ Sbjct: 1602 SESLSSPIPIH----RIVLFRIAY---QIADALAYLHT-LGVIYRDLKPENIL 1646 >SB_26127| Best HMM Match : Pkinase (HMM E-Value=5.3e-10) Length = 460 Score = 30.7 bits (66), Expect = 1.0 Identities = 13/37 (35%), Positives = 27/37 (72%) Frame = +1 Query: 526 KLFELEIKYGLMQIAEGLAFLHTDVKLLHRNVCPESI 636 +L E ++K L+Q+A+GL ++H+ + L+H ++ P +I Sbjct: 234 RLSEADLKMLLLQLAQGLKYIHS-LHLVHMDIKPGNI 269 >SB_6748| Best HMM Match : Pkinase (HMM E-Value=1.7e-05) Length = 315 Score = 29.9 bits (64), Expect = 1.8 Identities = 11/30 (36%), Positives = 20/30 (66%) Frame = +1 Query: 550 YGLMQIAEGLAFLHTDVKLLHRNVCPESII 639 Y + +GL +LHT K++H ++ PE+I+ Sbjct: 150 YIFLGTLKGLDYLHTKCKIIHTDIKPENIL 179 >SB_29061| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 355 Score = 29.9 bits (64), Expect = 1.8 Identities = 17/48 (35%), Positives = 24/48 (50%) Frame = -1 Query: 511 VQVLVEAYFPCSLVYWLSSQTLVQWRTLSSHDSLRGYAVQLRSADVVV 368 V V+V AY+ C L YW S L +R + D+ ++ L A V V Sbjct: 254 VAVMVTAYYGCYLTYW-SGWILCSFRRVFCDDAFTFISIFLSYASVAV 300 >SB_58065| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 600 Score = 29.1 bits (62), Expect = 3.2 Identities = 28/107 (26%), Positives = 52/107 (48%), Gaps = 1/107 (0%) Frame = +1 Query: 310 KADRDIMLETLKRGIIQLTKLRHPQILTVQHSLEESRESLAFATEPVFASLANILGYTEN 489 K+DR++ +TL G+ + HP + +H + R +AFA + A +A +G + Sbjct: 327 KSDRELNPKTLTSGLDDYPRASHPSEIE-RH--VDLRCWMAFAA-GLMADIAEAVGQNSD 382 Query: 490 MPQPIPGHLTNYKLFELEIKYGLMQIAEGLAFLHTD-VKLLHRNVCP 627 + +L++ KL + + + + Q HT VKL+HR+ P Sbjct: 383 PYKQTSAYLSDVKLLD-KYHWSVRQQMYSDFGNHTKFVKLVHRSTQP 428 >SB_26833| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 854 Score = 29.1 bits (62), Expect = 3.2 Identities = 26/102 (25%), Positives = 47/102 (46%) Frame = +1 Query: 334 ETLKRGIIQLTKLRHPQILTVQHSLEESRESLAFATEPVFASLANILGYTENMPQPIPGH 513 E + I +LRHP I+ + EE +E L E V + LG N + Sbjct: 245 EIVNETTIMREQLRHPNIVRYFKAFEE-KEKLYIIMELVEGAP---LGEHFNSLKEKGTR 300 Query: 514 LTNYKLFELEIKYGLMQIAEGLAFLHTDVKLLHRNVCPESII 639 + +++ + I QI GL ++H + ++HR++ P +I+ Sbjct: 301 FSEERIWHIFI-----QIVLGLRYIHKEKHIVHRDLTPNNIM 337 >SB_37572| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 314 Score = 29.1 bits (62), Expect = 3.2 Identities = 9/27 (33%), Positives = 20/27 (74%) Frame = +1 Query: 559 MQIAEGLAFLHTDVKLLHRNVCPESII 639 + + L +LH+++K++HR+V P +I+ Sbjct: 135 VSVVSALEYLHSNLKVIHRDVKPSNIL 161 >SB_23835| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 596 Score = 29.1 bits (62), Expect = 3.2 Identities = 17/37 (45%), Positives = 21/37 (56%) Frame = +1 Query: 307 QKADRDIMLETLKRGIIQLTKLRHPQILTVQHSLEES 417 QK + D MLE KR II LRH ++L + LE S Sbjct: 496 QKEESD-MLERTKRDIILDRTLRHQEMLDTRRKLENS 531 >SB_43399| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 953 Score = 28.7 bits (61), Expect = 4.2 Identities = 13/41 (31%), Positives = 22/41 (53%) Frame = -3 Query: 371 SFVSCIIPLLRVSNIMSLSAFCHLSNCFFSNTNIDASCFVD 249 S ++ +P L +SN+MSL+ SN N+D +C + Sbjct: 433 SSLNAFVPALLLSNVMSLAPKIDEVREAISNANLDLACITE 473 >SB_207| Best HMM Match : RVT_1 (HMM E-Value=7.4e-06) Length = 773 Score = 28.7 bits (61), Expect = 4.2 Identities = 13/41 (31%), Positives = 22/41 (53%) Frame = -3 Query: 371 SFVSCIIPLLRVSNIMSLSAFCHLSNCFFSNTNIDASCFVD 249 S ++ +P L +SN+MSL+ SN N+D +C + Sbjct: 144 SSLNAFVPALLLSNVMSLAPKIDEVREAISNANLDLACITE 184 >SB_34527| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 177 Score = 28.3 bits (60), Expect = 5.6 Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 8/57 (14%) Frame = -1 Query: 514 NVQVLVEA-YFPCSLVYWLSSQT---LVQWRTLSS----HDSLRGYAVQLRSADVVV 368 NV+ + E+ Y C ++ ++ + T L W+T HDSL GY V LR D V+ Sbjct: 102 NVRYVRESSYVSCPVLRYVLASTPLMLTLWKTKKFTRFVHDSLVGYKVMLRGRDFVL 158 >SB_28982| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1287 Score = 28.3 bits (60), Expect = 5.6 Identities = 26/98 (26%), Positives = 49/98 (50%) Frame = +1 Query: 346 RGIIQLTKLRHPQILTVQHSLEESRESLAFATEPVFASLANILGYTENMPQPIPGHLTNY 525 R + L KL H I+ ++ + E+ + L F E + +L ++ +N + +P Sbjct: 15 REVKSLRKLSHTNIVKLKEVIREN-DHLYFVFEYMKENLYQMM---KNRDKLLP------ 64 Query: 526 KLFELEIKYGLMQIAEGLAFLHTDVKLLHRNVCPESII 639 E I+ + QI +GLAF+H HR++ PE+++ Sbjct: 65 ---ESVIRNVIYQILQGLAFIHKH-GYFHRDMKPENLL 98 >SB_55525| Best HMM Match : WD40 (HMM E-Value=1.1) Length = 203 Score = 27.9 bits (59), Expect = 7.4 Identities = 9/28 (32%), Positives = 17/28 (60%) Frame = -3 Query: 155 GKTPDNCDTVLLTDE*NLLKTSISKYYC 72 G T D+CDT+ + ++ T++ K+ C Sbjct: 112 GPTIDHCDTLFMISALTIISTAVDKFRC 139 >SB_58716| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 192 Score = 27.9 bits (59), Expect = 7.4 Identities = 12/39 (30%), Positives = 21/39 (53%) Frame = -3 Query: 365 VSCIIPLLRVSNIMSLSAFCHLSNCFFSNTNIDASCFVD 249 ++ +P L +SN+MSL+ SN N+D +C + Sbjct: 81 LNAFVPALLLSNVMSLAPKIDEVREAISNANLDLACITE 119 >SB_37006| Best HMM Match : 7tm_1 (HMM E-Value=1.4e-22) Length = 407 Score = 27.5 bits (58), Expect = 9.7 Identities = 15/38 (39%), Positives = 22/38 (57%) Frame = -3 Query: 257 FVDFLYPLYIFHSRPGPALAMNCVASNSLVTGFPGKTP 144 F+D+L LYI + P A+ V++N+LV KTP Sbjct: 67 FIDYLRTLYIVNCVIQPIFAIVAVSTNTLVLYAIIKTP 104 >SB_32763| Best HMM Match : Histone_HNS (HMM E-Value=0.15) Length = 481 Score = 27.5 bits (58), Expect = 9.7 Identities = 18/69 (26%), Positives = 35/69 (50%), Gaps = 5/69 (7%) Frame = +1 Query: 241 YKKSTKQEASIFVFEKKQLDRWQKADRDIM-----LETLKRGIIQLTKLRHPQILTVQHS 405 YKK+ K + KK+LD W++ D+ L L G+ + T+ + +I+ ++ Sbjct: 247 YKKNEKMKGDTQRM-KKELDSWKRIQADMKMQYQDLRVLYDGVCKHTEEQKREIVEMKLL 305 Query: 406 LEESRESLA 432 +E + S+A Sbjct: 306 MERDKRSIA 314 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 19,027,150 Number of Sequences: 59808 Number of extensions: 375354 Number of successful extensions: 1020 Number of sequences better than 10.0: 20 Number of HSP's better than 10.0 without gapping: 939 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1019 length of database: 16,821,457 effective HSP length: 79 effective length of database: 12,096,625 effective search space used: 1608851125 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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