Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov11d09
(568 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L41887-1|AAA88098.1| 238|Homo sapiens splicing factor, arginine... 29 8.6
L22253-1|AAA35495.1| 238|Homo sapiens 9G8 splicing factor protein. 29 8.6
D50928-1|BAA09487.2| 962|Homo sapiens KIAA0138 protein. 29 8.6
BT006745-1|AAP35391.1| 238|Homo sapiens splicing factor, argini... 29 8.6
BC022328-1|AAH22328.1| 238|Homo sapiens splicing factor, argini... 29 8.6
BC017908-1|AAH17908.1| 238|Homo sapiens splicing factor, argini... 29 8.6
BC017369-1|AAH17369.1| 238|Homo sapiens splicing factor, argini... 29 8.6
BC000997-1|AAH00997.1| 238|Homo sapiens splicing factor, argini... 29 8.6
AY513287-1|AAT08040.1| 238|Homo sapiens aging-associated protei... 29 8.6
AY166860-1|AAN87842.1| 238|Homo sapiens arginine/serine-rich sp... 29 8.6
AC074366-2|AAX93102.1| 238|Homo sapiens unknown protein. 29 8.6
AC004611-1|AAC14666.1| 953|Homo sapiens KIAA0138 protein. 29 8.6
>L41887-1|AAA88098.1| 238|Homo sapiens splicing factor,
arginine/serine-rich 7 protein.
Length = 238
Score = 29.5 bits (63), Expect = 8.6
Identities = 22/74 (29%), Positives = 31/74 (41%)
Frame = +3
Query: 225 DQCRSAGLRFQLNRDALHCTERRRN*MHRMETERLDHHRFRHSRSRMGRC*YRWSQTTDP 404
D+C G + D + RRR+ R R+ SRSR R S++ P
Sbjct: 104 DRCYECGEKGHYAYDCHRYSRRRRSRSRSRSHSRSRGRRYSRSRSRSRG---RRSRSASP 160
Query: 405 KR*HNIGLRESSGA 446
+R +I LR S A
Sbjct: 161 RRSRSISLRRSRSA 174
>L22253-1|AAA35495.1| 238|Homo sapiens 9G8 splicing factor protein.
Length = 238
Score = 29.5 bits (63), Expect = 8.6
Identities = 22/74 (29%), Positives = 31/74 (41%)
Frame = +3
Query: 225 DQCRSAGLRFQLNRDALHCTERRRN*MHRMETERLDHHRFRHSRSRMGRC*YRWSQTTDP 404
D+C G + D + RRR+ R R+ SRSR R S++ P
Sbjct: 104 DRCYECGEKGHYAYDCHRYSRRRRSRSRSRSHSRSRGRRYSRSRSRSRG---RRSRSASP 160
Query: 405 KR*HNIGLRESSGA 446
+R +I LR S A
Sbjct: 161 RRSRSISLRRSRSA 174
>D50928-1|BAA09487.2| 962|Homo sapiens KIAA0138 protein.
Length = 962
Score = 29.5 bits (63), Expect = 8.6
Identities = 18/43 (41%), Positives = 21/43 (48%)
Frame = +3
Query: 234 RSAGLRFQLNRDALHCTERRRN*MHRMETERLDHHRFRHSRSR 362
R R Q R L C +R+R RME ERL+ R R R R
Sbjct: 666 RKEKARLQRERLQLEC-QRQRLERERMERERLERERMRVERER 707
>BT006745-1|AAP35391.1| 238|Homo sapiens splicing factor,
arginine/serine-rich 7, 35kDa protein.
Length = 238
Score = 29.5 bits (63), Expect = 8.6
Identities = 22/74 (29%), Positives = 31/74 (41%)
Frame = +3
Query: 225 DQCRSAGLRFQLNRDALHCTERRRN*MHRMETERLDHHRFRHSRSRMGRC*YRWSQTTDP 404
D+C G + D + RRR+ R R+ SRSR R S++ P
Sbjct: 104 DRCYECGEKGHYAYDCHRYSRRRRSRSRSRSHSRSRGRRYSRSRSRSRG---RRSRSASP 160
Query: 405 KR*HNIGLRESSGA 446
+R +I LR S A
Sbjct: 161 RRSRSISLRRSRSA 174
>BC022328-1|AAH22328.1| 238|Homo sapiens splicing factor,
arginine/serine-rich 7, 35kDa protein.
Length = 238
Score = 29.5 bits (63), Expect = 8.6
Identities = 22/74 (29%), Positives = 31/74 (41%)
Frame = +3
Query: 225 DQCRSAGLRFQLNRDALHCTERRRN*MHRMETERLDHHRFRHSRSRMGRC*YRWSQTTDP 404
D+C G + D + RRR+ R R+ SRSR R S++ P
Sbjct: 104 DRCYECGEKGHYAYDCHRYSRRRRSRSRSRSHSRSRGRRYSRSRSRSRG---RRSRSASP 160
Query: 405 KR*HNIGLRESSGA 446
+R +I LR S A
Sbjct: 161 RRSRSISLRRSRSA 174
>BC017908-1|AAH17908.1| 238|Homo sapiens splicing factor,
arginine/serine-rich 7, 35kDa protein.
Length = 238
Score = 29.5 bits (63), Expect = 8.6
Identities = 22/74 (29%), Positives = 31/74 (41%)
Frame = +3
Query: 225 DQCRSAGLRFQLNRDALHCTERRRN*MHRMETERLDHHRFRHSRSRMGRC*YRWSQTTDP 404
D+C G + D + RRR+ R R+ SRSR R S++ P
Sbjct: 104 DRCYECGEKGHYAYDCHRYSRRRRSRSRSRSHSRSRGRRYSRSRSRSRG---RRSRSASP 160
Query: 405 KR*HNIGLRESSGA 446
+R +I LR S A
Sbjct: 161 RRSRSISLRRSRSA 174
>BC017369-1|AAH17369.1| 238|Homo sapiens splicing factor,
arginine/serine-rich 7, 35kDa protein.
Length = 238
Score = 29.5 bits (63), Expect = 8.6
Identities = 22/74 (29%), Positives = 31/74 (41%)
Frame = +3
Query: 225 DQCRSAGLRFQLNRDALHCTERRRN*MHRMETERLDHHRFRHSRSRMGRC*YRWSQTTDP 404
D+C G + D + RRR+ R R+ SRSR R S++ P
Sbjct: 104 DRCYECGEKGHYAYDCHRYSRRRRSRSRSRSHSRSRGRRYSRSRSRSRG---RRSRSASP 160
Query: 405 KR*HNIGLRESSGA 446
+R +I LR S A
Sbjct: 161 RRSRSISLRRSRSA 174
>BC000997-1|AAH00997.1| 238|Homo sapiens splicing factor,
arginine/serine-rich 7, 35kDa protein.
Length = 238
Score = 29.5 bits (63), Expect = 8.6
Identities = 22/74 (29%), Positives = 31/74 (41%)
Frame = +3
Query: 225 DQCRSAGLRFQLNRDALHCTERRRN*MHRMETERLDHHRFRHSRSRMGRC*YRWSQTTDP 404
D+C G + D + RRR+ R R+ SRSR R S++ P
Sbjct: 104 DRCYECGEKGHYAYDCHRYSRRRRSRSRSRSHSRSRGRRYSRSRSRSRG---RRSRSASP 160
Query: 405 KR*HNIGLRESSGA 446
+R +I LR S A
Sbjct: 161 RRSRSISLRRSRSA 174
>AY513287-1|AAT08040.1| 238|Homo sapiens aging-associated protein 3
protein.
Length = 238
Score = 29.5 bits (63), Expect = 8.6
Identities = 22/74 (29%), Positives = 31/74 (41%)
Frame = +3
Query: 225 DQCRSAGLRFQLNRDALHCTERRRN*MHRMETERLDHHRFRHSRSRMGRC*YRWSQTTDP 404
D+C G + D + RRR+ R R+ SRSR R S++ P
Sbjct: 104 DRCYECGEKGHYAYDCHRYSRRRRSRSRSRSHSRSRGRRYSRSRSRSRG---RRSRSASP 160
Query: 405 KR*HNIGLRESSGA 446
+R +I LR S A
Sbjct: 161 RRSRSISLRRSRSA 174
>AY166860-1|AAN87842.1| 238|Homo sapiens arginine/serine-rich
splicing factor 7 type B protein.
Length = 238
Score = 29.5 bits (63), Expect = 8.6
Identities = 22/74 (29%), Positives = 31/74 (41%)
Frame = +3
Query: 225 DQCRSAGLRFQLNRDALHCTERRRN*MHRMETERLDHHRFRHSRSRMGRC*YRWSQTTDP 404
D+C G + D + RRR+ R R+ SRSR R S++ P
Sbjct: 104 DRCYECGEKGHYAYDCHRYSRRRRSRSRSRSHSRSRGRRYSRSRSRSRG---RRSRSASP 160
Query: 405 KR*HNIGLRESSGA 446
+R +I LR S A
Sbjct: 161 RRSRSISLRRSRSA 174
>AC074366-2|AAX93102.1| 238|Homo sapiens unknown protein.
Length = 238
Score = 29.5 bits (63), Expect = 8.6
Identities = 22/74 (29%), Positives = 31/74 (41%)
Frame = +3
Query: 225 DQCRSAGLRFQLNRDALHCTERRRN*MHRMETERLDHHRFRHSRSRMGRC*YRWSQTTDP 404
D+C G + D + RRR+ R R+ SRSR R S++ P
Sbjct: 104 DRCYECGEKGHYAYDCHRYSRRRRSRSRSRSHSRSRGRRYSRSRSRSRG---RRSRSASP 160
Query: 405 KR*HNIGLRESSGA 446
+R +I LR S A
Sbjct: 161 RRSRSISLRRSRSA 174
>AC004611-1|AAC14666.1| 953|Homo sapiens KIAA0138 protein.
Length = 953
Score = 29.5 bits (63), Expect = 8.6
Identities = 18/43 (41%), Positives = 21/43 (48%)
Frame = +3
Query: 234 RSAGLRFQLNRDALHCTERRRN*MHRMETERLDHHRFRHSRSR 362
R R Q R L C +R+R RME ERL+ R R R R
Sbjct: 657 RKEKARLQRERLQLEC-QRQRLERERMERERLERERMRVERER 698
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,008,172
Number of Sequences: 237096
Number of extensions: 1722162
Number of successful extensions: 4518
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 3609
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4243
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5759818212
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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