Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov11d09
(568 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92970-2|CAB07481.2| 1461|Caenorhabditis elegans Hypothetical pr... 31 0.44
AL117199-4|CAN99722.1| 1342|Caenorhabditis elegans Hypothetical ... 30 1.0
AL117195-32|CAB60770.3| 1342|Caenorhabditis elegans Hypothetical... 30 1.0
AC199158-9|ABO33285.1| 229|Caenorhabditis elegans Hypothetical ... 29 3.1
AC199158-5|ABO33288.1| 229|Caenorhabditis elegans Hypothetical ... 29 3.1
U41553-5|AAO91694.1| 468|Caenorhabditis elegans Hypothetical pr... 28 5.4
Z29117-5|CAC42271.1| 1704|Caenorhabditis elegans Hypothetical pr... 27 7.1
Z29117-4|CAA82384.2| 1691|Caenorhabditis elegans Hypothetical pr... 27 7.1
Z29117-3|CAA82383.2| 1689|Caenorhabditis elegans Hypothetical pr... 27 7.1
AF049142-1|AAC24116.1| 1704|Caenorhabditis elegans ATP-binding c... 27 7.1
>Z92970-2|CAB07481.2| 1461|Caenorhabditis elegans Hypothetical protein
H06O01.2 protein.
Length = 1461
Score = 31.5 bits (68), Expect = 0.44
Identities = 20/71 (28%), Positives = 31/71 (43%)
Frame = +3
Query: 138 HHHHHVYEFGR*ITRPVQRLVHARRGTSKDQCRSAGLRFQLNRDALHCTERRRN*MHRME 317
HHHHH ++ +P + H R KD+ R+ G R D T + + H +
Sbjct: 1389 HHHHHHHKSKE--EKPKEAKDHKERDREKDRERNRGER---RMDHGEGTSKDHHREHHKD 1443
Query: 318 TERLDHHRFRH 350
+ HHR +H
Sbjct: 1444 HHKDHHHREQH 1454
>AL117199-4|CAN99722.1| 1342|Caenorhabditis elegans Hypothetical
protein Y57A10A.1 protein.
Length = 1342
Score = 30.3 bits (65), Expect = 1.0
Identities = 18/62 (29%), Positives = 31/62 (50%)
Frame = +1
Query: 328 LITIDSDTQDQEWAVVNTVGRRQRTLSGNITSDYANLRARIIKIPLDDLKTFRITRNNQQ 507
+I+I SD D+E + ++Q ++GN A R + P+D+ K R R+N +
Sbjct: 962 IISISSDESDKEEEPSCSNTKKQAKMAGNERKTIAPARRSVGDTPIDNEKEERECRSNTK 1021
Query: 508 MQ 513
Q
Sbjct: 1022 KQ 1023
Score = 28.7 bits (61), Expect = 3.1
Identities = 19/67 (28%), Positives = 30/67 (44%)
Frame = +1
Query: 271 LCIVQNADGTKCIEWRPNDLITIDSDTQDQEWAVVNTVGRRQRTLSGNITSDYANLRARI 450
L + +NA+ K L++ SD DQE + +QR ++ N + R RI
Sbjct: 904 LKVAENAENGKKASATKRRLVSSSSDESDQESRSTRSTTNKQRKIAEN-EKRASTPRVRI 962
Query: 451 IKIPLDD 471
I I D+
Sbjct: 963 ISISSDE 969
>AL117195-32|CAB60770.3| 1342|Caenorhabditis elegans Hypothetical
protein Y57A10A.1 protein.
Length = 1342
Score = 30.3 bits (65), Expect = 1.0
Identities = 18/62 (29%), Positives = 31/62 (50%)
Frame = +1
Query: 328 LITIDSDTQDQEWAVVNTVGRRQRTLSGNITSDYANLRARIIKIPLDDLKTFRITRNNQQ 507
+I+I SD D+E + ++Q ++GN A R + P+D+ K R R+N +
Sbjct: 962 IISISSDESDKEEEPSCSNTKKQAKMAGNERKTIAPARRSVGDTPIDNEKEERECRSNTK 1021
Query: 508 MQ 513
Q
Sbjct: 1022 KQ 1023
Score = 28.7 bits (61), Expect = 3.1
Identities = 19/67 (28%), Positives = 30/67 (44%)
Frame = +1
Query: 271 LCIVQNADGTKCIEWRPNDLITIDSDTQDQEWAVVNTVGRRQRTLSGNITSDYANLRARI 450
L + +NA+ K L++ SD DQE + +QR ++ N + R RI
Sbjct: 904 LKVAENAENGKKASATKRRLVSSSSDESDQESRSTRSTTNKQRKIAEN-EKRASTPRVRI 962
Query: 451 IKIPLDD 471
I I D+
Sbjct: 963 ISISSDE 969
>AC199158-9|ABO33285.1| 229|Caenorhabditis elegans Hypothetical
protein AC8.12 protein.
Length = 229
Score = 28.7 bits (61), Expect = 3.1
Identities = 25/102 (24%), Positives = 43/102 (42%)
Frame = +1
Query: 190 KDLFTQDGVLLKTSVGRPVSDFNSIGMLCIVQNADGTKCIEWRPNDLITIDSDTQDQEWA 369
K L+ + V+ T RP+ D N + L + C + PN+ + ++
Sbjct: 77 KSLYARYSVINSTQYVRPIIDLNKVERLKPLMAR--MLCQLYMPNNAVHEAFSATSKDGI 134
Query: 370 VVNTVGRRQRTLSGNITSDYANLRARIIKIPLDDLKTFRITR 495
VV+ R T G +R+R+IK P +DL ++R
Sbjct: 135 VVSQQQLRDLTRRG---CPDTLIRSRVIKHPTNDLTARDVSR 173
>AC199158-5|ABO33288.1| 229|Caenorhabditis elegans Hypothetical
protein AC8.7 protein.
Length = 229
Score = 28.7 bits (61), Expect = 3.1
Identities = 25/102 (24%), Positives = 43/102 (42%)
Frame = +1
Query: 190 KDLFTQDGVLLKTSVGRPVSDFNSIGMLCIVQNADGTKCIEWRPNDLITIDSDTQDQEWA 369
K L+ + V+ T RP+ D N + L + C + PN+ + ++
Sbjct: 77 KSLYARYSVINSTQYVRPIIDLNKVERLKPLMAR--MLCQLYMPNNAVHEAFSATSKDGI 134
Query: 370 VVNTVGRRQRTLSGNITSDYANLRARIIKIPLDDLKTFRITR 495
VV+ R T G +R+R+IK P +DL ++R
Sbjct: 135 VVSQQQLRDLTRRG---CPDTLIRSRVIKHPTNDLTARDVSR 173
>U41553-5|AAO91694.1| 468|Caenorhabditis elegans Hypothetical
protein ZK1193.5a protein.
Length = 468
Score = 27.9 bits (59), Expect = 5.4
Identities = 22/79 (27%), Positives = 39/79 (49%)
Frame = +1
Query: 169 DELHDQYKDLFTQDGVLLKTSVGRPVSDFNSIGMLCIVQNADGTKCIEWRPNDLITIDSD 348
D + + +KD+ + V+LK + +P +D NS+ + V+N + PN L +D+
Sbjct: 82 DTVENLFKDISSH--VVLKI-LSKPSTDSNSVQCISEVKNKLLKAAVNKNPNVLTNVDN- 137
Query: 349 TQDQEWAVVNTVGRRQRTL 405
Q V+NT+ TL
Sbjct: 138 --QQVKDVINTIIAGDETL 154
>Z29117-5|CAC42271.1| 1704|Caenorhabditis elegans Hypothetical
protein C48B4.4c protein.
Length = 1704
Score = 27.5 bits (58), Expect = 7.1
Identities = 12/51 (23%), Positives = 31/51 (60%), Gaps = 2/51 (3%)
Frame = +1
Query: 100 VVIVCILAGDCIVIIIIMS--TSSGDELHDQYKDLFTQDGVLLKTSVGRPV 246
++I C+L G + +++ + TSS + ++D ++ T + V L+++ +P+
Sbjct: 29 LIIPCLLLGPLVYLVVKNADHTSSPENIYDNFQVKGTVEDVFLESNFIKPI 79
>Z29117-4|CAA82384.2| 1691|Caenorhabditis elegans Hypothetical
protein C48B4.4b protein.
Length = 1691
Score = 27.5 bits (58), Expect = 7.1
Identities = 12/51 (23%), Positives = 31/51 (60%), Gaps = 2/51 (3%)
Frame = +1
Query: 100 VVIVCILAGDCIVIIIIMS--TSSGDELHDQYKDLFTQDGVLLKTSVGRPV 246
++I C+L G + +++ + TSS + ++D ++ T + V L+++ +P+
Sbjct: 29 LIIPCLLLGPLVYLVVKNADHTSSPENIYDNFQVKGTVEDVFLESNFIKPI 79
>Z29117-3|CAA82383.2| 1689|Caenorhabditis elegans Hypothetical
protein C48B4.4a protein.
Length = 1689
Score = 27.5 bits (58), Expect = 7.1
Identities = 12/51 (23%), Positives = 31/51 (60%), Gaps = 2/51 (3%)
Frame = +1
Query: 100 VVIVCILAGDCIVIIIIMS--TSSGDELHDQYKDLFTQDGVLLKTSVGRPV 246
++I C+L G + +++ + TSS + ++D ++ T + V L+++ +P+
Sbjct: 29 LIIPCLLLGPLVYLVVKNADHTSSPENIYDNFQVKGTVEDVFLESNFIKPI 79
>AF049142-1|AAC24116.1| 1704|Caenorhabditis elegans ATP-binding
cassette transporter protein.
Length = 1704
Score = 27.5 bits (58), Expect = 7.1
Identities = 12/51 (23%), Positives = 31/51 (60%), Gaps = 2/51 (3%)
Frame = +1
Query: 100 VVIVCILAGDCIVIIIIMS--TSSGDELHDQYKDLFTQDGVLLKTSVGRPV 246
++I C+L G + +++ + TSS + ++D ++ T + V L+++ +P+
Sbjct: 29 LIIPCLLLGPLVYLVVKNADHTSSPENIYDNFQVKGTVEDVFLESNFIKPI 79
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,332,776
Number of Sequences: 27780
Number of extensions: 284570
Number of successful extensions: 957
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 897
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 951
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1176726318
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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