Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11d09
         (568 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    23   1.6  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    23   1.6  
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    23   2.1  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          23   2.8  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      23   2.8  
AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive...    21   8.6  

>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = +1

Query: 85  LERTYVVIVCILAGDCIVIIIIMSTSSGDELHD 183
           LE+TY    C+LA D +    I+S +   ELH+
Sbjct: 442 LEKTYERDTCLLASDALK--QILSAAYNVELHN 472


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = +1

Query: 85  LERTYVVIVCILAGDCIVIIIIMSTSSGDELHD 183
           LE+TY    C+LA D +    I+S +   ELH+
Sbjct: 480 LEKTYERDTCLLASDALK--QILSAAYNVELHN 510


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +1

Query: 169 DELHDQYKDLFTQDGVLLK 225
           +++HD YKDL  + G L K
Sbjct: 77  NKIHDAYKDLNQRYGALCK 95


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -3

Query: 74  FYAIISWYLNKQSKTNLISRQS 9
           FY I +W L+  S  N I+R S
Sbjct: 540 FYEIDNWMLDLNSGLNKITRNS 561


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -3

Query: 74  FYAIISWYLNKQSKTNLISRQS 9
           FY I +W L+  S  N I+R S
Sbjct: 540 FYEIDNWMLDLNSGLNKITRNS 561


>AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive
           opsin protein.
          Length = 371

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 8/29 (27%), Positives = 15/29 (51%)
 Frame = -1

Query: 472 NRLGVFL*CAPEDSRNPMLCYRLGSVVCD 386
           N L +++ CA +  R P   + +   +CD
Sbjct: 66  NGLVIWIFCAAKSLRTPSNMFVVNLAICD 94


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,755
Number of Sequences: 438
Number of extensions: 3626
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 16440594
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)