Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11d06
         (555 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A6C6U4 Cluster: VCBS; n=1; Planctomyces maris DSM 8797|...    36   0.63 
UniRef50_Q6Y8G4 Cluster: Drebrin 1 isoform a; n=2; Eutheria|Rep:...    35   1.1  
UniRef50_Q9JY30 Cluster: Hemagglutinin/hemolysin-related protein...    34   1.9  
UniRef50_Q2CHG7 Cluster: Parallel beta-helix repeat protein; n=4...    34   1.9  
UniRef50_UPI000155600B Cluster: PREDICTED: similar to calcium-bi...    33   4.5  
UniRef50_Q8C3X4-2 Cluster: Isoform 2 of Q8C3X4 ; n=3; Murinae|Re...    33   5.9  
UniRef50_Q4T508 Cluster: Chromosome 1 SCAF9472, whole genome sho...    33   5.9  
UniRef50_Q5K9H9 Cluster: Putative uncharacterized protein; n=1; ...    33   5.9  
UniRef50_Q8N442 Cluster: GTP-binding protein GUF1 homolog; n=108...    33   5.9  
UniRef50_Q16643 Cluster: Drebrin; n=36; Euteleostomi|Rep: Drebri...    33   5.9  

>UniRef50_A6C6U4 Cluster: VCBS; n=1; Planctomyces maris DSM
           8797|Rep: VCBS - Planctomyces maris DSM 8797
          Length = 441

 Score = 35.9 bits (79), Expect = 0.63
 Identities = 20/60 (33%), Positives = 31/60 (51%)
 Frame = +3

Query: 204 TVPHQLDQQPEQPLEYSAESDAGNTAVFWLHSAAALRNADGSGERPLPVHQCVDFAVSFQ 383
           ++P   D Q EQP+   AE    +T   W HS+  + + DG G + L V    DF+ +F+
Sbjct: 19  SIPIFADDQFEQPVRLKAEGKIIDTGAAWGHSSPCIEDLDGDGLKDLMVG---DFSGTFR 75


>UniRef50_Q6Y8G4 Cluster: Drebrin 1 isoform a; n=2; Eutheria|Rep:
           Drebrin 1 isoform a - Oryctolagus cuniculus (Rabbit)
          Length = 668

 Score = 35.1 bits (77), Expect = 1.1
 Identities = 19/57 (33%), Positives = 25/57 (43%)
 Frame = +3

Query: 111 DTGVLRVSIASRIRRDRDGFTSREPARLPPDTVPHQLDQQPEQPLEYSAESDAGNTA 281
           D+      +  RI +  D  TS +P  LPP   P Q  Q+P    E S E+ A   A
Sbjct: 340 DSSTASTPVTERIEKALDEVTSSQPPPLPPPPPPAQETQEPRHSEETSKEARAAAAA 396


>UniRef50_Q9JY30 Cluster: Hemagglutinin/hemolysin-related protein;
           n=1; Neisseria meningitidis serogroup B|Rep:
           Hemagglutinin/hemolysin-related protein - Neisseria
           meningitidis serogroup B
          Length = 2514

 Score = 34.3 bits (75), Expect = 1.9
 Identities = 21/46 (45%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
 Frame = -2

Query: 206 GIRRQASWFATGKTVAISSNARR-NADTEYAGIIASARSTNNTAKH 72
           GIR Q   FA+   VAI +N R  N+ T  A   A+A+ T+NTA+H
Sbjct: 332 GIRNQGQLFASSGNVAIDANGRLVNSGTMAA---ANAKDTDNTAEH 374


>UniRef50_Q2CHG7 Cluster: Parallel beta-helix repeat protein; n=4;
            cellular organisms|Rep: Parallel beta-helix repeat
            protein - Oceanicola granulosus HTCC2516
          Length = 3143

 Score = 34.3 bits (75), Expect = 1.9
 Identities = 16/39 (41%), Positives = 20/39 (51%)
 Frame = +3

Query: 126  RVSIASRIRRDRDGFTSREPARLPPDTVPHQLDQQPEQP 242
            RV + +R R   DG   R  A LPP    H+ D QP +P
Sbjct: 1839 RVGLGARHRHGHDGAARRHVAALPPGPRHHRRDGQPRRP 1877


>UniRef50_UPI000155600B Cluster: PREDICTED: similar to
           calcium-binding protein CaBP4, partial; n=1;
           Ornithorhynchus anatinus|Rep: PREDICTED: similar to
           calcium-binding protein CaBP4, partial - Ornithorhynchus
           anatinus
          Length = 708

 Score = 33.1 bits (72), Expect = 4.5
 Identities = 21/64 (32%), Positives = 24/64 (37%)
 Frame = +3

Query: 159 RDGFTSREPARLPPDTVPHQLDQQPEQPLEYSAESDAGNTAVFWLHSAAALRNADGSGER 338
           RD     EP   PP +VP    + P   L   A  + G    F L      R A G    
Sbjct: 476 RDPGRQPEPLSCPPGSVPSASPRGPGPALSREAGGEGGRRQPFHLLGPHPARRAPGPKLE 535

Query: 339 PLPV 350
           PLPV
Sbjct: 536 PLPV 539


>UniRef50_Q8C3X4-2 Cluster: Isoform 2 of Q8C3X4 ; n=3; Murinae|Rep:
           Isoform 2 of Q8C3X4 - Mus musculus (Mouse)
          Length = 563

 Score = 32.7 bits (71), Expect = 5.9
 Identities = 18/44 (40%), Positives = 27/44 (61%)
 Frame = +1

Query: 58  RSILLCFAVLLVERADAMIPAYSVSALRLAFDEIATVLPVANQL 189
           RS+  C  VLLV  A+  I A +V+   LAF+   +V+PV N++
Sbjct: 135 RSLSACQGVLLVVDANEGIQAQTVANFFLAFEAQLSVIPVINKI 178


>UniRef50_Q4T508 Cluster: Chromosome 1 SCAF9472, whole genome
           shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
           Chromosome 1 SCAF9472, whole genome shotgun sequence -
           Tetraodon nigroviridis (Green puffer)
          Length = 329

 Score = 32.7 bits (71), Expect = 5.9
 Identities = 17/44 (38%), Positives = 26/44 (59%)
 Frame = +1

Query: 58  RSILLCFAVLLVERADAMIPAYSVSALRLAFDEIATVLPVANQL 189
           RSI  C  VLL+  A+  I A +V+   LAF+    ++PV N++
Sbjct: 100 RSISACQGVLLIVDANQGIQAQTVANFYLAFEAQLAIIPVINKI 143


>UniRef50_Q5K9H9 Cluster: Putative uncharacterized protein; n=1;
           Filobasidiella neoformans|Rep: Putative uncharacterized
           protein - Cryptococcus neoformans (Filobasidiella
           neoformans)
          Length = 1352

 Score = 32.7 bits (71), Expect = 5.9
 Identities = 18/61 (29%), Positives = 27/61 (44%)
 Frame = +3

Query: 165 GFTSREPARLPPDTVPHQLDQQPEQPLEYSAESDAGNTAVFWLHSAAALRNADGSGERPL 344
           G  S  PA+ P DT+  +L   P+QP           ++      AAALR++    + P 
Sbjct: 2   GSASSRPAKAPQDTMSSKLPASPQQPPPALPPKPGDGSSDILQLRAAALRSSTARSQDPR 61

Query: 345 P 347
           P
Sbjct: 62  P 62


>UniRef50_Q8N442 Cluster: GTP-binding protein GUF1 homolog; n=108;
           cellular organisms|Rep: GTP-binding protein GUF1 homolog
           - Homo sapiens (Human)
          Length = 669

 Score = 32.7 bits (71), Expect = 5.9
 Identities = 18/44 (40%), Positives = 27/44 (61%)
 Frame = +1

Query: 58  RSILLCFAVLLVERADAMIPAYSVSALRLAFDEIATVLPVANQL 189
           RS+  C  VLLV  A+  I A +V+   LAF+   +V+PV N++
Sbjct: 153 RSLSACQGVLLVVDANEGIQAQTVANFFLAFEAQLSVIPVINKI 196


>UniRef50_Q16643 Cluster: Drebrin; n=36; Euteleostomi|Rep: Drebrin -
           Homo sapiens (Human)
          Length = 649

 Score = 32.7 bits (71), Expect = 5.9
 Identities = 19/53 (35%), Positives = 26/53 (49%)
 Frame = +3

Query: 111 DTGVLRVSIASRIRRDRDGFTSREPARLPPDTVPHQLDQQPEQPLEYSAESDA 269
           D+      +A +I R  D  TS +P  LPP   P Q  Q+P  P+  S E+ A
Sbjct: 340 DSSTASTPVAEQIERALDEVTSSQPPPLPPPPPPAQETQEP-SPILDSEETRA 391


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 405,322,699
Number of Sequences: 1657284
Number of extensions: 6346067
Number of successful extensions: 23667
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 22807
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23654
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 36655321736
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)