Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11d06
         (555 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    28   0.24 
AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein pr...    25   1.7  
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T...    24   2.9  
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T...    24   2.9  
AY391746-1|AAR28996.1|  502|Anopheles gambiae putative GPCR prot...    23   5.1  
AJ439060-14|CAD27765.1|  471|Anopheles gambiae putative acetyltr...    23   5.1  
U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles ...    23   6.7  
AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr...    23   6.7  
AF532982-1|AAQ10289.1|  459|Anopheles gambiae putative RNA methy...    23   6.7  
Y17717-1|CAA76832.1|  101|Anopheles gambiae cE5 protein protein.       23   8.9  
AY146757-1|AAO12072.1|  246|Anopheles gambiae odorant-binding pr...    23   8.9  
AJ618928-1|CAF02007.1|  285|Anopheles gambiae odorant-binding pr...    23   8.9  

>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 27.9 bits (59), Expect = 0.24
 Identities = 12/41 (29%), Positives = 23/41 (56%)
 Frame = -1

Query: 399 RSREDVGTKQRNQHTDVQEEDARQIRQRCVKQRQSATKIRQ 277
           R ++    +Q+ Q    Q++  RQ +Q+C +QRQ   + +Q
Sbjct: 186 RQQQQQQQQQQQQQQQQQQQQQRQQQQQCQQQRQQQPQQQQ 226


>AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein
           protein.
          Length = 942

 Score = 25.0 bits (52), Expect = 1.7
 Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
 Frame = +3

Query: 105 RDDTGVLRVSIASRIRR--DRDGFTSREPARLPPDTVPHQLDQQPEQPL 245
           R   G   +  AS IRR   R G     P+R+P D    ++ Q+ E+P+
Sbjct: 667 RGQNGEYLLDQASYIRRIAKRFGQEDARPSRIPMDPGYPKIQQKEEKPM 715


>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1977

 Score = 24.2 bits (50), Expect = 2.9
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +3

Query: 237  QPLEYSAESDAGNTAVFWLHSAAALR 314
            Q ++YS+    G+T+V W+   A  R
Sbjct: 1785 QQMQYSSSGVGGSTSVLWVPDHAVTR 1810


>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1978

 Score = 24.2 bits (50), Expect = 2.9
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +3

Query: 237  QPLEYSAESDAGNTAVFWLHSAAALR 314
            Q ++YS+    G+T+V W+   A  R
Sbjct: 1786 QQMQYSSSGVGGSTSVLWVPDHAVTR 1811


>AY391746-1|AAR28996.1|  502|Anopheles gambiae putative GPCR
           protein.
          Length = 502

 Score = 23.4 bits (48), Expect = 5.1
 Identities = 10/29 (34%), Positives = 19/29 (65%)
 Frame = +3

Query: 9   IYILVL*CASFFLNHDSIDFIVFRCIIGR 95
           IY++   C  FF+ +  I+FI++ C+ G+
Sbjct: 407 IYLVQNCCQLFFMTNFGINFILY-CVSGQ 434


>AJ439060-14|CAD27765.1|  471|Anopheles gambiae putative
           acetyltransferase protein.
          Length = 471

 Score = 23.4 bits (48), Expect = 5.1
 Identities = 15/51 (29%), Positives = 23/51 (45%)
 Frame = -1

Query: 402 TRSREDVGTKQRNQHTDVQEEDARQIRQRCVKQRQSATKIRQYCRRQILHY 250
           TR+R      +RN+   V +        R V QR  +++   Y RRQ  +Y
Sbjct: 152 TRARAYGAILERNEPRGVSKFILASEPHRYVVQRYESSEEELYARRQNCYY 202


>U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles
           gambiae putativetubulin alpha chain mRNA, complete cds.
           ).
          Length = 91

 Score = 23.0 bits (47), Expect = 6.7
 Identities = 12/23 (52%), Positives = 17/23 (73%)
 Frame = -3

Query: 172 VKPSRSRRMRDAMLTRSTPVSSR 104
           V+  R+RR  +A++TRSTP S R
Sbjct: 34  VRCPRTRRS-EAVMTRSTPSSPR 55


>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
           protein.
          Length = 1253

 Score = 23.0 bits (47), Expect = 6.7
 Identities = 7/37 (18%), Positives = 20/37 (54%)
 Frame = +1

Query: 277 LPYFGCTLPLLYATLTDLASVLFLYISVLISLFRSNV 387
           +PY      L++ T+    ++  + +  L+++FR ++
Sbjct: 566 MPYIIYQCMLMFGTILGPGTIFLMMVGALVAVFRIDI 602


>AF532982-1|AAQ10289.1|  459|Anopheles gambiae putative RNA
           methylase protein.
          Length = 459

 Score = 23.0 bits (47), Expect = 6.7
 Identities = 17/67 (25%), Positives = 26/67 (38%), Gaps = 1/67 (1%)
 Frame = +3

Query: 117 GVLRVSIASRIRRDRDGFTSREPARLPPDTVPHQLDQQPEQPLEYSAES-DAGNTAVFWL 293
           G+   +     +  R      E A   P T P+QL Q  +  L++SA     G   V W 
Sbjct: 314 GIREATERIEFKTQRRATAMTEDAVHYPSTSPYQLCQMYKDLLQFSARHLKLGGRLVCWF 373

Query: 294 HSAAALR 314
              ++ R
Sbjct: 374 PMLSSRR 380


>Y17717-1|CAA76832.1|  101|Anopheles gambiae cE5 protein protein.
          Length = 101

 Score = 22.6 bits (46), Expect = 8.9
 Identities = 12/41 (29%), Positives = 18/41 (43%)
 Frame = +3

Query: 141 SRIRRDRDGFTSREPARLPPDTVPHQLDQQPEQPLEYSAES 263
           S +    D  T+R+P R P        D+Q   P   S++S
Sbjct: 61  SLLEEHADAPTARDPGRNPEFLRNSNTDEQASAPAASSSDS 101


>AY146757-1|AAO12072.1|  246|Anopheles gambiae odorant-binding
           protein AgamOBP39 protein.
          Length = 246

 Score = 22.6 bits (46), Expect = 8.9
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -3

Query: 337 RSPDPSALRKAAAEC 293
           R P P ALR+A A C
Sbjct: 30  RDPPPPALREAQAAC 44


>AJ618928-1|CAF02007.1|  285|Anopheles gambiae odorant-binding
           protein OBPjj83a protein.
          Length = 285

 Score = 22.6 bits (46), Expect = 8.9
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -3

Query: 337 RSPDPSALRKAAAEC 293
           R P P ALR+A A C
Sbjct: 30  RDPPPPALREAQAAC 44


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 428,781
Number of Sequences: 2352
Number of extensions: 7027
Number of successful extensions: 24
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 51722361
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)