Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11d06
         (555 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U00802-1|AAA16256.1|  649|Homo sapiens drebrin E2 protein.             33   0.89 
D17530-1|BAA04480.1|  649|Homo sapiens drebrin E protein.              33   0.89 
BC036768-1|AAH36768.1|  669|Homo sapiens GUF1 GTPase homolog (S....    33   0.89 
BC007567-1|AAH07567.1|  649|Homo sapiens drebrin 1 protein.            33   0.89 
BC007281-1|AAH07281.1|  649|Homo sapiens drebrin 1 protein.            33   0.89 
BC000283-1|AAH00283.1|  649|Homo sapiens drebrin 1 protein.            33   0.89 
AL110225-1|CAB53683.1|  651|Homo sapiens hypothetical protein pr...    33   0.89 
AK023282-1|BAB14507.1|  669|Homo sapiens protein ( Homo sapiens ...    33   0.89 

>U00802-1|AAA16256.1|  649|Homo sapiens drebrin E2 protein.
          Length = 649

 Score = 32.7 bits (71), Expect = 0.89
 Identities = 19/53 (35%), Positives = 26/53 (49%)
 Frame = +3

Query: 111 DTGVLRVSIASRIRRDRDGFTSREPARLPPDTVPHQLDQQPEQPLEYSAESDA 269
           D+      +A +I R  D  TS +P  LPP   P Q  Q+P  P+  S E+ A
Sbjct: 340 DSSTASTPVAEQIERALDEVTSSQPPPLPPPPPPAQETQEP-SPILDSEETRA 391


>D17530-1|BAA04480.1|  649|Homo sapiens drebrin E protein.
          Length = 649

 Score = 32.7 bits (71), Expect = 0.89
 Identities = 19/53 (35%), Positives = 26/53 (49%)
 Frame = +3

Query: 111 DTGVLRVSIASRIRRDRDGFTSREPARLPPDTVPHQLDQQPEQPLEYSAESDA 269
           D+      +A +I R  D  TS +P  LPP   P Q  Q+P  P+  S E+ A
Sbjct: 340 DSSTASTPVAEQIERALDEVTSSQPPPLPPPPPPAQETQEP-SPILDSEETRA 391


>BC036768-1|AAH36768.1|  669|Homo sapiens GUF1 GTPase homolog (S.
           cerevisiae) protein.
          Length = 669

 Score = 32.7 bits (71), Expect = 0.89
 Identities = 18/44 (40%), Positives = 27/44 (61%)
 Frame = +1

Query: 58  RSILLCFAVLLVERADAMIPAYSVSALRLAFDEIATVLPVANQL 189
           RS+  C  VLLV  A+  I A +V+   LAF+   +V+PV N++
Sbjct: 153 RSLSACQGVLLVVDANEGIQAQTVANFFLAFEAQLSVIPVINKI 196


>BC007567-1|AAH07567.1|  649|Homo sapiens drebrin 1 protein.
          Length = 649

 Score = 32.7 bits (71), Expect = 0.89
 Identities = 19/53 (35%), Positives = 26/53 (49%)
 Frame = +3

Query: 111 DTGVLRVSIASRIRRDRDGFTSREPARLPPDTVPHQLDQQPEQPLEYSAESDA 269
           D+      +A +I R  D  TS +P  LPP   P Q  Q+P  P+  S E+ A
Sbjct: 340 DSSTASTPVAEQIERALDEVTSSQPPPLPPPPPPAQETQEP-SPILDSEETRA 391


>BC007281-1|AAH07281.1|  649|Homo sapiens drebrin 1 protein.
          Length = 649

 Score = 32.7 bits (71), Expect = 0.89
 Identities = 19/53 (35%), Positives = 26/53 (49%)
 Frame = +3

Query: 111 DTGVLRVSIASRIRRDRDGFTSREPARLPPDTVPHQLDQQPEQPLEYSAESDA 269
           D+      +A +I R  D  TS +P  LPP   P Q  Q+P  P+  S E+ A
Sbjct: 340 DSSTASTPVAEQIERALDEVTSSQPPPLPPPPPPAQETQEP-SPILDSEETRA 391


>BC000283-1|AAH00283.1|  649|Homo sapiens drebrin 1 protein.
          Length = 649

 Score = 32.7 bits (71), Expect = 0.89
 Identities = 19/53 (35%), Positives = 26/53 (49%)
 Frame = +3

Query: 111 DTGVLRVSIASRIRRDRDGFTSREPARLPPDTVPHQLDQQPEQPLEYSAESDA 269
           D+      +A +I R  D  TS +P  LPP   P Q  Q+P  P+  S E+ A
Sbjct: 340 DSSTASTPVAEQIERALDEVTSSQPPPLPPPPPPAQETQEP-SPILDSEETRA 391


>AL110225-1|CAB53683.1|  651|Homo sapiens hypothetical protein
           protein.
          Length = 651

 Score = 32.7 bits (71), Expect = 0.89
 Identities = 19/53 (35%), Positives = 26/53 (49%)
 Frame = +3

Query: 111 DTGVLRVSIASRIRRDRDGFTSREPARLPPDTVPHQLDQQPEQPLEYSAESDA 269
           D+      +A +I R  D  TS +P  LPP   P Q  Q+P  P+  S E+ A
Sbjct: 342 DSSTASTPVAEQIERALDEVTSSQPPPLPPPPPPAQETQEP-SPILDSEETRA 393


>AK023282-1|BAB14507.1|  669|Homo sapiens protein ( Homo sapiens
           cDNA FLJ13220 fis, clone NT2RP4002047, moderately
           similar to GTP-BINDING PROTEIN LEPA. ).
          Length = 669

 Score = 32.7 bits (71), Expect = 0.89
 Identities = 18/44 (40%), Positives = 27/44 (61%)
 Frame = +1

Query: 58  RSILLCFAVLLVERADAMIPAYSVSALRLAFDEIATVLPVANQL 189
           RS+  C  VLLV  A+  I A +V+   LAF+   +V+PV N++
Sbjct: 153 RSLSACQGVLLVVDANEGIQAQTVANFFLAFEAQLSVIPVINKI 196


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,202,466
Number of Sequences: 237096
Number of extensions: 858377
Number of successful extensions: 2913
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2817
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2913
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5533942988
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)