BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bmov11d05 (637 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value U80931-1|AAB37998.2| 343|Caenorhabditis elegans Hypothetical pr... 30 1.2 Z74472-2|CAA98945.1| 188|Caenorhabditis elegans Hypothetical pr... 29 2.8 Z36753-8|CAA85336.1| 326|Caenorhabditis elegans Hypothetical pr... 29 2.8 Z72508-5|CAA96638.1| 525|Caenorhabditis elegans Hypothetical pr... 29 3.7 U41011-4|AAA82287.1| 294|Caenorhabditis elegans Hypothetical pr... 28 4.9 AL132948-18|CAD31819.1| 390|Caenorhabditis elegans Hypothetical... 28 6.4 Z72512-5|CAA96667.2| 351|Caenorhabditis elegans Hypothetical pr... 27 8.5 AF003130-6|AAO38639.1| 343|Caenorhabditis elegans Dehydrogenase... 27 8.5 AF003130-5|AAB54122.2| 368|Caenorhabditis elegans Dehydrogenase... 27 8.5 >U80931-1|AAB37998.2| 343|Caenorhabditis elegans Hypothetical protein T01B11.1 protein. Length = 343 Score = 30.3 bits (65), Expect = 1.2 Identities = 12/35 (34%), Positives = 23/35 (65%) Frame = -3 Query: 443 TILVSSFHLLQLFYTLLKQKNRDYFQWVIWLYSQN 339 T+L+S + + FY L+K+K +YF ++I + + N Sbjct: 24 TVLISLLLVAKAFYNLMKRKRSNYFVFLISIIAAN 58 >Z74472-2|CAA98945.1| 188|Caenorhabditis elegans Hypothetical protein F23H12.2 protein. Length = 188 Score = 29.1 bits (62), Expect = 2.8 Identities = 14/49 (28%), Positives = 28/49 (57%) Frame = +2 Query: 194 EPAHDLLDKVILRQLDLLEQKIKCELNIESNVNNGSIHLAKSRYIMGQS 340 + A D+ D +++ L E ++ EL NV+ G++H+A + + G+S Sbjct: 69 DAAPDVTDPSQMQRFFLQEVQLGEELMAAGNVDEGAVHIANAVMLCGES 117 >Z36753-8|CAA85336.1| 326|Caenorhabditis elegans Hypothetical protein T09A5.9 protein. Length = 326 Score = 29.1 bits (62), Expect = 2.8 Identities = 29/93 (31%), Positives = 44/93 (47%), Gaps = 1/93 (1%) Frame = +2 Query: 221 VILRQLDLLEQKIKCELNIESNVNNGSIHLAKSRYIMGQSSVSTTKLPTESSPDFSASIM 400 V L LDL E ++ ++ES VN S+ L+ +R TKL T + S Sbjct: 81 VTLTSLDLYENQLTEISHLESLVNLVSLDLSYNRIRQINGLDKLTKLETL----YLVSNK 136 Query: 401 CKTIEE-DGMTKLKLYQNKENTIVPLHWFGVLV 496 + IE + +T+LKL + +N I + G LV Sbjct: 137 IEKIENLEALTQLKLLELGDNRIKKIENIGHLV 169 >Z72508-5|CAA96638.1| 525|Caenorhabditis elegans Hypothetical protein F28H7.6 protein. Length = 525 Score = 28.7 bits (61), Expect = 3.7 Identities = 24/120 (20%), Positives = 59/120 (49%), Gaps = 11/120 (9%) Frame = +2 Query: 224 ILRQLDLLEQKIKCELNIESNVN--NGSIHLAKSRYIMGQSSVSTTKLPTESSPDFSASI 397 IL +++ E+ + ++++E+ VN NG ++++ + K +P F ++I Sbjct: 14 ILHKIETFEENTEFDVHVETLVNTKNGGDPSFLTKFVNDKGIPQGLKGENYINPSFCSNI 73 Query: 398 MCKTIEEDGMTKLKLYQNKENTIVPLH-W-------FGV-LVPQNLHMAQKIFQTTLSYV 550 + + ++ + + Q+K +++ L+ W FGV L+ + ++QT L+Y+ Sbjct: 74 DDQVLTDEKYSNCTILQSKNGSVLKLNFWTNFDTFKFGVNLLELKNVTLELVYQTELTYL 133 >U41011-4|AAA82287.1| 294|Caenorhabditis elegans Hypothetical protein D2024.4 protein. Length = 294 Score = 28.3 bits (60), Expect = 4.9 Identities = 10/32 (31%), Positives = 20/32 (62%) Frame = +2 Query: 530 QTTLSYVVECSNIQLQLEENMKNINALRKYLN 625 +TT + C N++ ++EN +N L+K+L+ Sbjct: 105 KTTCKFCSLCENVKENVKENESKLNKLKKFLS 136 >AL132948-18|CAD31819.1| 390|Caenorhabditis elegans Hypothetical protein Y39B6A.22 protein. Length = 390 Score = 27.9 bits (59), Expect = 6.4 Identities = 11/26 (42%), Positives = 15/26 (57%) Frame = +2 Query: 401 CKTIEEDGMTKLKLYQNKENTIVPLH 478 C + G TKLK Y NK ++ V L+ Sbjct: 101 CNGFPDSGHTKLKFYSNKSSSFVDLN 126 >Z72512-5|CAA96667.2| 351|Caenorhabditis elegans Hypothetical protein R07B5.7 protein. Length = 351 Score = 27.5 bits (58), Expect = 8.5 Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 1/38 (2%) Frame = -2 Query: 504 FCGTKTPNQCSGTIVFSLFWYNFS-FVIPSSSIVLHII 394 +C T PNQ I F F++N+S V P +L +I Sbjct: 108 YCATVYPNQYIKLIFFLTFYFNYSAMVFPFLLCLLRLI 145 >AF003130-6|AAO38639.1| 343|Caenorhabditis elegans Dehydrogenases, short chain protein2, isoform c protein. Length = 343 Score = 27.5 bits (58), Expect = 8.5 Identities = 10/16 (62%), Positives = 11/16 (68%) Frame = +1 Query: 295 WKHSPCEVSIHYGTKF 342 WKH+P EV YG KF Sbjct: 250 WKHAPNEVKQEYGEKF 265 >AF003130-5|AAB54122.2| 368|Caenorhabditis elegans Dehydrogenases, short chain protein2, isoform a protein. Length = 368 Score = 27.5 bits (58), Expect = 8.5 Identities = 10/16 (62%), Positives = 11/16 (68%) Frame = +1 Query: 295 WKHSPCEVSIHYGTKF 342 WKH+P EV YG KF Sbjct: 275 WKHAPNEVKQEYGEKF 290 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 14,369,078 Number of Sequences: 27780 Number of extensions: 299070 Number of successful extensions: 911 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 891 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 911 length of database: 12,740,198 effective HSP length: 78 effective length of database: 10,573,358 effective search space used: 1406256614 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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