BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bmov11d05 (637 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value DQ468657-1|ABE02558.1| 322|Apis mellifera 1,4,5-trisphosphate r... 23 1.9 AB006152-1|BAA24504.1| 178|Apis mellifera inositol 1,4,5-tripho... 23 1.9 EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein. 23 3.3 EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein. 23 3.3 AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 22 5.7 >DQ468657-1|ABE02558.1| 322|Apis mellifera 1,4,5-trisphosphate receptor protein. Length = 322 Score = 23.4 bits (48), Expect = 1.9 Identities = 25/133 (18%), Positives = 60/133 (45%), Gaps = 4/133 (3%) Frame = +2 Query: 245 LEQKIKCELNIESNVNNGSIHLAKSRYIMGQSSVSTTKLPTESSPDFSASIMCKTIEEDG 424 L+ +I C L+I + + A +GQ ++ + T++ F +S C ++ DG Sbjct: 63 LDYRISCLLSIFKQEFDET-ERASGDLSLGQKTIDLELIGTQAEGIFGSSEECVALDLDG 121 Query: 425 M---TKLKLYQNKENTIVPLHWFGVLVPQNLHMAQKIFQTTLSYVVECSNIQLQL-EENM 592 T L++ + + +H + LV LH+ + F + +QL + + ++ Sbjct: 122 QGGRTFLRVLLH-----LAMHDYPPLVSGALHLLFRHFSQRQEVLQAFKQVQLLVSDSDV 176 Query: 593 KNINALRKYLNII 631 ++ ++ L+++ Sbjct: 177 ESYKQIKSDLDVL 189 >AB006152-1|BAA24504.1| 178|Apis mellifera inositol 1,4,5-triphosphate recepter protein. Length = 178 Score = 23.4 bits (48), Expect = 1.9 Identities = 25/133 (18%), Positives = 60/133 (45%), Gaps = 4/133 (3%) Frame = +2 Query: 245 LEQKIKCELNIESNVNNGSIHLAKSRYIMGQSSVSTTKLPTESSPDFSASIMCKTIEEDG 424 L+ +I C L+I + + A +GQ ++ + T++ F +S C ++ DG Sbjct: 31 LDYRISCLLSIFKQEFDET-ERASGDLSLGQKTIDLELIGTQAEGIFGSSEECVALDLDG 89 Query: 425 M---TKLKLYQNKENTIVPLHWFGVLVPQNLHMAQKIFQTTLSYVVECSNIQLQL-EENM 592 T L++ + + +H + LV LH+ + F + +QL + + ++ Sbjct: 90 QGGRTFLRVLLH-----LAMHDYPPLVSGALHLLFRHFSQRQEVLQAFKQVQLLVSDSDV 144 Query: 593 KNINALRKYLNII 631 ++ ++ L+++ Sbjct: 145 ESYKQIKSDLDVL 157 >EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein. Length = 684 Score = 22.6 bits (46), Expect = 3.3 Identities = 10/27 (37%), Positives = 15/27 (55%) Frame = -3 Query: 254 FALKGQVVSKLLYPINRELVQYLTWCN 174 F LK + V LLY + + + +TW N Sbjct: 33 FLLKQKKVYNLLYRVAQPALANITWYN 59 >EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein. Length = 684 Score = 22.6 bits (46), Expect = 3.3 Identities = 10/27 (37%), Positives = 15/27 (55%) Frame = -3 Query: 254 FALKGQVVSKLLYPINRELVQYLTWCN 174 F LK + V LLY + + + +TW N Sbjct: 33 FLLKQKKVYNLLYRVAQPALANITWYN 59 >AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. Length = 735 Score = 21.8 bits (44), Expect = 5.7 Identities = 14/40 (35%), Positives = 18/40 (45%), Gaps = 2/40 (5%) Frame = +2 Query: 155 GFLDNQHCTMSNIEP--AHDLLDKVILRQLDLLEQKIKCE 268 GFL+N CT + P H L ++ LD IK E Sbjct: 627 GFLNNSMCTSTTTSPDKEHVLAHNDLMSPLDEPAVHIKQE 666 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 172,942 Number of Sequences: 438 Number of extensions: 3515 Number of successful extensions: 6 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 6 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6 length of database: 146,343 effective HSP length: 55 effective length of database: 122,253 effective search space used: 19071468 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -